Posters

Monday 20 August
PS01 – Empowered by Microbes
351A
Chromium (VI) reduction by bacterial cells: optimal conditions for the development of
an industrial wastewater treatment system
Mauricio Alessandrello, Diana Vullo*
Universidad Nacional de General Sarmiento, Argentina
352A
Degradation of methyl ter-butyl ether by bacterial consortia obtained from hydrocarbon
contaminated soils
1
2
Guadalupe Alfonso Gordillo* , Diego Zaragoza Contreras , César Hugo Hernández
1
1
Rodriguez , Janet Jan Roblero
1
2
Escuela Nacional de Ciencias Biológicas-IPN, Mexico, Instituto Mexicano del Petroleo,
Mexico
353A
Marine benthic microbial fuel cells: electrochemical and microbiological laboratory /
field data
1
1
1
1
2
Y. Meriah Arias-Thode* , Lewis Hsu , Adriane Wotawa-Bergen , Jeff Kagan , Jinjun Kan
1
2
SPAWAR, Pacific, United States, Stroud Water Research Institute, United States
354A
Functional compartmentalization in a lab-scale anaerobic baffled reactor for in situ
biogas upgrading
1
1
2
3
3
Babett Arnold* , Jana Seifert , Ayrat M. Ziganshin , Martina Carstensen , Holger Schneider ,
3
1
Jens Born , Sabine Kleinsteuber
1
2
Helmholtz Centre for Environmental Research - UFZ, Germany, Kazan (Volga Region)
3
Federal University, Russia, Flensburg University of Applied Science, Germany
355A
Fungal mechanisms in phosphate solubilization
1
1
2
Jaleh Bahri-Esfahani* , Tim George , Geoff Gadd
1
2
The James Hutton Institute, United Kingdom, University of Dundee, United Kingdom
356A
In-situ and Laboratory Enriched Microbial Community Composition and Function
Associated with Coal-bed Methane from Powder River Basin Coals
1
2
3
4
4
Elliott Barnhart* , Elizabeth Meredith , Jennifer McIntosh , Arthur Clark , William Orem , Alfred
5
5
Cunningham , Matthew Fields
1
2
3
Montana State University, USA, Montana Bureau of Mines and Geology, USA, University of
4
5
Arizona, USA, USGS, USA, Montana State University/Center for Biofilm Engineering, USA
357A
Growth promotion of maize by plant-growth-promoting rhizobacteria isolated from
guarana, a native tropical crop
1
1
1
1
Bruna Batista , Maria Letícia Bonatelli* , Maria Carolina Quecine , Sarina Tsui , Fernanda
2
1
1
Damasceno , João Lúcio Azevedo , Aline Aparecida Pizzirani-Kleiner
1
2
ESALQ/USP, Brazil, UNIFAL-MG, Brazil
358A
The microbial community ecology of an algal biofuel raceway pond
1
1
1
2
Tisza Bell* , Brent Peyton , Matthew Fields , Brad Wahlen
1
2
Montana State University, USA, Utah State University, USA
359A
The effect of absorbent materials on the biodegradation of petroleum hydrocarbons
Brian Bicknell*, Pre De Silva, Lisa Brodie
Australian Catholic University, Australia
360A
The role of cyclic lipopeptide biosurfactants of Pseudomonas sp. in improvement of
solubilisation and biodegradation of phenanthrene
Lise Bonnichsen*, Niels O. G. Jørgensen, Jan Sørensen, Ole Nybroe
Section of Genetics and Microbiology, Department of Agriculture and Ecology, University of
Copenhagen, Denmark
5
PS01 – Empowered by Microbes
Monday 20 August
361A
Memory effect in biofiltration ecosystems: impact of disturbance history on nitrifying
population and activity
1
2
3
3
4
Léa Cabrol* , Luc Malhautier , Franck Poly , Xavier Le Roux , Anne Sophie Lepeuple , Jean
2
Louis Fanlo
1
2
Universidad Católica de Valparaíso, Chile, Laboratoire Génie de l'Environnement Industriel,
3
Ecole des Mines d'Ales, France, Laboratoire d'Ecologie Microbienne, University Lyon I, UMR
4
CNRS 5557, France, Veolia Environnement Recherche et Innovation, France
362A
Environmental bacteria involved in antibiotic and heavy metal resistance co-selection:
from the wastewater treatment plant to the river ecosystem
1
2
2
2
Serena Caucci* , Hauke Harms , Bärbel Kiesel , Antonis Chatzinotas , Thomas U.
1
Berendonk
1
2
Technische Universität Dresden, Germany, Helmholtz Centre for Environmental Research UFZ, Germany
363A
An in silico analysis of 1087 completed microbial genomes reveals 54 new putative O2
tolerant Nickel Iron (Ni-Fe) hydrogenases
Jillian Couto*, Joanne Schroder, William Sloan
University of Glasgow, United Kingdom
364A
Genetic fingerprinting of Brettanomyces yeast strains
1
1
2
1
3
Sam Crauwels , Annelies Justé , Fatemeh Bajoulkakahi , Pieter Busschaert , Jan Steensels ,
2
4
5
3
1
Guy Derdelinckx , Gorik De Samblanx , Kathleen Marchal , Kevin Verstrepen , Kris Willems ,
1
Bart Lievens*
1
Laboratory for Process Microbial Ecology and Bioinspirational Management (PME&BIM),
Consortium for Industrial Microbiology and Biotechnology (CIMB), Department of Microbial
and Molecular Systems (M2S), LFoRCe, KU Leuven Association, Lessius Mechelen, Campus
2
De Nayer, B-2860 Sint-Katelijne-Waver, Belgium, KULeuven -FBIW-M2S-LFoRCe - LIBR:
3
site MBS, Kasteelpark Arenberg, 33 PO box 2463 B -3001 - HEVERLEE - Belgium, VIB Lab
for Systems Biology and CMPG Lab for Genetics and Genomics, M2S, KU Leuven, B-3001
4
Leuven, Belgium, Laboratory for Process Microbial Ecology and Bioinspirational Management
(PME&BIM), Consortium for Industrial Microbiology and Biotechnology (CIMB), Department of
Microbial and Molecular Systems (M2S), LFoRCe, KU Leuven Association, Lessius Mechelen,
Campus De Nayer, B-2860 Sint-Katelijne-Waver, Belgium and Department of Computer
5
Science, KU Leuven, B-3001 Leuven, Belgium, Centre of Microbial and Plant Genetics
(CMPG), M2S, KU Leuven, B-3001 Leuven, Belgium
365A
Evaluation of the potential of micro-organisms originated from oil reservoirs for
bioremediation
1
2
3
Bruna Martins Dellagnezze* , Geogiana F. da Cruz , Suzan P. Vasconcellos , Valéria M.
1
Oliveira
1
2
Campinas University (UNICAMP), Brazil, State Univesity of North of Rio de Janeiro Darcy
3
Ribeiro (UENF), Brazil, Federal University of São Paulo (UNIFESP), Brazil
366A
The influence of anode potential on microbial diversity in bioelectrochemical systems
1
2
3
4
4
Paul Dennis* , Korneel Rabaey , Bernardino Virdis , Michael Imelfort , Inka Vanwonterghem ,
3
5
4
Paul Jensen , Philip Hugenholtz , Gene Tyson
1
2
The University of Queensland , Australia, Ghent University / Laboratory of Microbial Ecology
3
and Technology, Belgium, University of Queensland / Advanced Water Management Center,
4
Australia, University of Queensland / Australian Center for Ecogenomics and Advanced
5
Water Management Center, Australia, University of Queensland / Australian Center for
Ecogenomics, Australia
367A
Eubacteria and archaea diversity in two-steps psychrotroph anaerobic fermenter
Pascal Drouin*, Pierre Rivard
Université du Québec en Abitibi-Témiscamingue, Canada
6
PS01 – Empowered by Microbes
Monday 20 August
368A
The anaerobic fungal isolate Orpinomyces sp. strain C1A is an efficient plant biomass
degrader under anaerobic conditions
Mostafa Elshahed*, Chris Struchtemeyer, Hasan Atiyeh, Mark Wilkins, Audra Liggenstoffer
Oklahoma State University, United States
369A
Optimization of EPS and siderophore production in Pseudomonas veronii 2E for the
application in wastewater biotreatments
Maria Ferreira, Silvana Ramirez, Diana Vullo*
Universidad Nacional de General Sarmiento, Argentina
370A
Oil spill impact assessment and bioremediation in reef environment utilizing the coral
Mussismilia harttii (cnidaria, scleractinia)
1
2
3
Henrique Fragoso dos Santos* , Flávia Lima do Carmo , Gustavo Duarte , Emiliano
3
4
4
5
3
Calderon , Laura Marangoni , Adalto Bianchini , Ricardo Chaloub , Débora Pires , Clovis
3
2
2
Castro , Alexandre Rosado , Raquel Peixoto
1
2
Federal University of Rio de Janeiro , Brazil, Federal University of Rio de Janeiro/Institute of
3
Microbiology Professor Paulo de Góes, Brazil, Federal University of Rio de Janeiro/
4
Department of Invertebrates, Brazil, Federal University of Rio Grande / Institute of Biological
5
Sciences, Brazil, Federal University of Rio de Janeiro / Institute of Chemistry, Brazil
371A
Isolation of a novel Clostridium species from the gastro-intestinal tract of rats and
characterization of its intestinal functionality
1
1
1
2
3
Jacoline Gerritsen* , Susana Fuentes , Wieke Grievink , Laura van Nifrik , Sytze de Roock ,
3
3
1
Harro M. Timmerman , Ger T. Rijkers , Hauke Smidt
1
2
3
Wageningen University, Netherlands, Radboud University, Netherlands, University Medical
Center Utrecht, Netherlands
372A
Investigation of the bacterial community of a biofilm from novel Horizontal Flow Biofilm
Reactors (HFBRs) treating methane contaminated air at low temperature
1
2
2
2
2
Sean Gerrity* , Colm Kennelly , Cindy Smith , Richard Walsh , Edmund O'Reilly , Eoghan
2
2
Clifford , Gavin Collins
1
2
National University of Ireland Galway, Ireland, NUI Galway, Ireland
373A
Enrichment of microbial community generating electricity using a lab-scale sediment
fuel cell
1
1
2
Tai-Lee Hu* , Hsin-Yu Hou , Chenfang Lin
1
2
Feng Chia University/Dept. Environmental Engineering & Science, Taiwan, National Chung
Hsing University/ Dept. Soil & Environment Sciences, Taiwan
374A
Fungal treatment of polycyclic aromatic hydrocarbon-contaminated soil in field scale:
bacteria or fungi at work?
1
1
1
1
2
2
Kirsten S. Jørgensen* , K. Björklöf , L. Häkkinen , E. Schultz , M. Räsänen , E. Winquist , M.
3
Tuomela
1
2
3
Finnish Environment Institute, Finland, Aalto University, Finland, University of Helsinki,
Finland
375A
Using Soybean Curd Whey as Substrate for Vinegar Production
1
1
2
Jirapat Kanklai* , Sakunnee Bovonsombut , Sittisin Bovonsombut
1
2
Chiangmai University, Thailand, Maejo University, Thailand
376A
The influence of biotic and abiotic factors on degradation of the compostable plastic
packaging material polylactic acid
Mehlika Karamanlioglu*, Geoff Robson
the University of Manchester, United Kingdom
7
PS01 – Empowered by Microbes
Monday 20 August
377A
Trichloroethylene biodegradation by benzene, toluene and xylene oxidizing bacteria in
aerobic condition
1
2
3
Hyun-Sook Kim* , Taek Hyun You , Sang-Seob Lee
1
2
Kyonggi University, Department of Bioengineering, South Korea, Campbell University,
3
Department of Biological Sciences, United States, Kyonggi University, Department of Life
Science, College of Natural Science, South Korea
378A
Biological corrosion protection
Nardy Kip*, Hans van Veen
NIOO, Netherlands
379A
Monitoring microbial population dynamics using community flow cytometry
1
2
2
2
2
Christin Koch* , Ingo Fetzer , Thomas Hübschmann , Hauke Harms , Susann Müller
1
UFZ-Helmholtz Centre for Environmental Research, Department of Bioenergy, Germany,
2
UFZ-Helmholtz Centre for Environmental Research, Department of Environmental
Microbiology, Germany
380A
Potential of micromycetes in biofuel production from waste biomass of higher water
plants
Svetlana Kukanova*, Lyudmila Zaynitdinova, Munira Bakhtiyorova, Javlon Tashpulatov
Institute of microbiology, Uzbekistan
381A
Complete carbon tetrachloride dechlorination by combining a novel Dehalobacter
population with abiotic processes
Matthew Lee*, Joanna Koenig, Eliza Wells, Mike Manefield
University of New South Wales, Australia
382A
Hydrogen sulfide oxidation in an air-treating biofilter
1
2
2
2
Claus Lunde Pedersen* , Dezhao Liu , Michael Jørgen Hansen , Anders Feilberg , Louise
3
4
1
1
Helene Soegaard Jensen , Lise Bonne Guldberg , Andreas Schramm , Lars Peter Nielsen
1
2
Aarhus University - Department of Bioscience, Denmark, Aarhus University - Department of
3
Engineering, Denmark, Technical University of Denmark, Centre for Electron Nanoscopy,
4
Denmark, Department of Research and Development, SKOV A/S, Denmark
383A
Metatranscriptomic analysis of a nitrate-reducing benzene-degrading culture
Fei Luo*, Roya Gitiafroz, Cheryl Devine, Yunchen Gong, Elizabeth Edwards
University of Toronto, Canada
384A
Co-Production of Acetate and Methane by an Electrosynthetic Autotrophic Microbial
Community
1
2
2
2
3
Chris Marshall* , Dan Ross , Erin Fichot , Sean Norman , Harold May
1
2
3
Medical University of South Carolina, USA, USC, USA, MUSC, USA
385A
Microbial diversity associated with the endemic South Africa sponge, Tsitsikamma
favus, producing biologically active compounds
Gwynneth Matcher*, Tara Walmsley, Mike Davies-Coleman, Rosemary Dorrington
Rhodes University, South Africa
386A
Dynamics of bacterial biofilms formation on granular activated carbon in aquatic
sediments polluted with PCBs
1
1
1
1
1
Anne Mercier , Jennifer Harris-Hellal , Guillaume Wille* , Caroline Michel , Laurence Amalric ,
2
1
Catherine Morlay , Fabienne Battagli-Brunet
1
2
French geological survey (BRGM), France, MATEIS (MATEriaux : Ingénierie & Science),
UMR INSA-Lyon - UCBLyon 1 - CNRS, France
8
PS01 – Empowered by Microbes
Monday 20 August
387A
Coal seam microbiology: metagenomic insights from a methanogenic, coal-degrading
enrichment culture
1
1
2
1
1
David Midgley* , Paul Greenfield , Liam DH Elbourne , Nai Tran-Dinh , Dongmei Li , Ian T
2
1
Paulsen , Philip Hendry
1
2
CSIRO, Australia, Macquarie University, Australia
388A
Comparison of the efficiency of different biomass, marine algae and tropical climbing
vines, for the anaerobic bioconversion to a renewable energy source
Karla Márquez*
University of Puerto Rico, Puerto Rico
389A
Shifting microbial respiration patterns in soils and sediments with benthic snorkels
Kelly Nevin*, Jaclyn Izbicki, Oona Snoeyenbos-West, Derek Lovley
University of Massachusetts Amherst, United States
390A
Atrazine bioremediation of contaminated soil and groundwater at low temperatures
1
1
2
2
1
Aura Nousiainen* , Katarina Björklöf , Sneha Sagarkar , Atya Kapley , Kirsten S. Jørgensen
1
2
Finnish Environment Institute, Finland, National Environmental Engineering Research
Institute, India
391A
Use of in situ aerobic microbial activity in evaluating and operating effective biosparge
treatment of hydrocarbon contamination in groundwater
1
2
2
3
Michael O'Hare* , Pete Everds , Mark Losi , Mary Parker
1
2
3
San Diego State University, USA, Tetra Tech EC, Inc., USA, United States Navy, USA
392A
A comparative approach to bacterial flagellar motor as reciprocating internal
combustion engine
1
2
2
1
Mert Oktem* , Alp Uzunoglu , Imdat Taymaz , Benan Dincturk
1
2
Sakarya University, Department of Biology, Turkey, Sakarya University, Department of
Mechanical Engineering, Turkey
393A
Potential use of Cupriavidus necator for production of biodegradable plastics from
captured carbon dioxide under varying valeric acid concentration
Inseon Park, Eun Hea Jho, Kyoungphile Nam*
Dept of Civil and Environmental Engineering, Seoul National University, South Korea
394A
Potential use of Cupriavidus necator for production of biocompatible plastics from
captured carbon dioxide under varying valeric acid concentration
Inseon Park, Eun Hea Jho, Kyoungphile Nam*
Dept of Civil and Environmental Engineering, Seoul National University, South Korea
395A
Improving the electrochemical communication between Shewanella oneidensis MR-1
and electrodes with different approaches
1
1
1
2
1
1
Sunil Patil* , Kamrul Hasan , Kamil Górecki , Dónal Leech , Cecilia Hägerhäll , Lo Gorton
1
2
Lund University, Sweden, National University of Ireland Galway, Ireland
396A
Enrichment of lignocellulolytic microorganisms from a Hungarian thermal lake and their
application for biogas process enhancement
1
1
1
2
2
Katharina Porsch* , Jennifer Breuer , Marcus Kohlhase , Márton Palatinszky , Balázs Wirth ,
2
1
Erika M. Tóth , Marcell Nikolausz
1
2
Helmholtz Centre for Environmental Research - UFZ, Germany, Eötvös Loránd University,
Hungary
397A
Electrochemical Properties and Dynamics of Microbial Community Structure of Lactate
– fed Microbial Fuel Cells under Differerent External Resistances
Owen Rubaba*, Yutaka Kato, Kei Suzuki, Hiroki Mochihara, Nozomi Yoshida, Hiroyuki
Futamata
Shizuoka University, Materials and Chemical Engineering, Japan
9
PS01 – Empowered by Microbes
Monday 20 August
398A
Transfer of ionic liquid tolerance from the rain forest to E. coli through functional
screening of a DNA-library
Thomas Ruegg*, Blake Simmons, Steve Singer, Michael Thelen
Joint Bioenergy Institute, Lawrence Berkeley National Lab, United States
399A
Co-selection and persistence of heavy metal and antibiotic resistance in a metal
contaminated river ecosystem
1
1
2
1
Claudia Seiler* , Agnese Lupo , Wolf von Tümpling , Thomas U. Berendonk
1
2
Technische Universität Dresden, Germany, Helmholtz Centre for Environmental
Research, Germany
400A
Oxygen scavangers and enhancing electromethanogenesis in microbial electrolysis
cells (MEC)
Michael Siegert*, Douglas Call, Bruce Logan
Pennsylvania State University, USA
401A
The impact of greywater diversion on domestic septic tank systems
1
2
2
2
2
Alma Siggins* , Wendy Williamson , Virginia Baker , Louise Weaver , Andrew van Schiak ,
3
3
4
5
2
Hamish Lowe , Katie Beecroft , Steven Roberts , Ben Thompson , Jacqui Horswell
1
2
Institute for Environmental Science and Research Ltd., New Zealand, Institute of
3
Environmental Science and Research, New Zealand, Lowe Environmental Impact, New
4
5
Zealand, Watersmart, New Zealand, Kapiti Coast District Council, New Zealand
402A
Ecologically diverse fungi as workhorses in (pre)treating lignocellulosic feedstock for
biogas production
Sukhwinder Singh*, Dietmar Schlosser
The Helmholtz Centre for Environmental Research - UFZ, Germany
403A
Immobilization of microbial cells within microchannels by means of magnetite
nanoparticles
Gorazd Stojkovič*, Polona Žnidaršič-Plazl
University of Ljubljana, Slovenia
404A
Application of biomineralized particles to self-organized bioelectrode in microbial fuel
cell
Kei Suzuki*, Hiroki Mochihara, Nozomi Yoshida, Rubaba Owen, Hiroyuki Futamata
Shizuoka University, Japan
405A
Cleansing of industrial sewage with consortium of microorganisms and higher water
plants
Javlon Tashpulatov*, Djumaniyaz Kutliev, Svetlana Kukanova, Lyudmila Zaynitdinova
Institute of microbiology, Uzbekistan
406A
Isolation of an extreme thermophile from a waste-sourced inoculum and its use for the
production of second generation bio-ethanol
1
1
2
1
Ana Tomás* , Davide De Francisci , Dimitar Karakashev , Irini Angelidaki
1
2
DTU Environment, Denmark, DTU Environment, Czech Republic
407A
Characterization and evolution of microbial communities in olive mill wastewater
degrading microbial fuel cells
Mehmet Sefa Ulutas*, Meltem Tatlı, Mert Kumru, Halil Kurt, Salih Süha Akan, Hakan Bermek,
Alper Tunga Akarsubaşı
Istanbul technical university MOBGAM, Turkey
10
PS01 – Empowered by Microbes
Monday 20 August
408A
Transcriptomic analysis demonstrates the importance of multiple carbon fixation
pathways during depletion of carbon, nitrogen, and phosphorous and bio-oil
accumulation in Phaeodactylum tricornutum
Jacob Valenzuela*, Matthew Fields, Aurilien Mazurie
Montana State University, United States
409A
Prospection of enzymes of biotechnological interest from microorganisms associated
with coral species Mussismilia braziliensis, Millepora alcicornis and Porites astreoides
1
1
1
2
Carem Vilela , Flávia Lima do Carmo , Henrique Fragoso dos Santos , Gustavo Duarte* ,
2
2
1
1
Débora Pires , Clovis Castro , Alexandre Rosado , Raquel Peixoto
1
Federal University of Rio de Janeiro / Institute of Microbiology Professor Paulo de Góes,
2
Brazil, Federal University of Rio de Janeiro / Department of Invertebrates, Brazil
410A
Development of probiotic products for aquaculture
Barbara Weber*, Goncalo A Santos, Michaela Mohnl, Viviana Klose, Gerd Schatzmayr
1
Biomin Research Center, Austria
411A
Biofilm as a production platform for biochemicals using alternative feedstocks
Vinoth Wigneswaran*, Anders Folkesson, Peter Ruhdal Jensen, Lars Jelsbak
Department of Systems Biology, Technical University of Denmark, Denmark
412A
Methane production from waste biomass of higher water plants
Lyudmila Zaynitdinova*, Svetlana Kukanova, Olga Verushkina, Javlon Tashpulatov
Institute of microbiology, Uzbekistan
413A
Influence of antibiotic treatment of sows on intestinal microbiota in their offspring
1
1
2
1
Jing Zhang* , Odette Peréz , Jean-Paul Lallès , Hauke Smidt
1
2
Wageningen University, Netherlands, Institut National de la Recherche Agronomique France
PS02 – Light and Microbial Life
421A
Differential regulation of proteorhodopsin gene expression in the marine bacterium
Vibrio sp. AND4
1
1
1
2
1
Neelam Akram* , Joakim Palovaara , Jeremy Forsberg , José M González , Jarone Pinhassi
1
2
Linnaeus University, SE-39182 Kalmar, Sweden, University of La Laguna, ES-38206 La
Laguna, Tenerife, Spain
422A
Genome mining revealed coding genes belonging to the photolyase-cryptochrome
family in UV-resistant bacteria isolated from High-Altitude Andean Lakes
1
2
2
2
Virginia Helena Albarracin* , Daniel Kurth , Gabriela Ferrer , Omar Federico Ordoñez ,
3
3
3
3
Santiago Revale , Estefania Mancini , Soledad Romero , Martin Vazquez , Wolfgang
1
2
Gärtner , Maria Eugenia Farias
1
2
Max-Planck Institute for Bioinorganic Chemistry, Germany, Lab of Microbial Research on
3
Andean Lakes(LIMLA), PROIMI-CCT-CONICET, Argentina, Rosario Agrobiotechnological
Institute (INDEAR) – CONICET, CCT-CONICET, Argentina
423A
Reactive oxygen production induced by visible and near-infrared radiation in
chlorophyll-d containing cyanobacteria
1
1
2
2
3
Lars Behrendt* , Marc Staal , Simona M. Cristescu , Frans J.M. Harren , Martin Schliep ,
3
1
Anthony W. D. Larkum , Michael Kühl
1
2
3
Copenhagen University, Denmark, Radboud University Nijmegen, Netherlands, University
of Technology Sydney, Australia
11
PS02 – Light and Microbial Life
Monday 20 August
424A
Oxygenic photosynthesis as a defense mechanism against iron-oxide encrustation
1
1
2
1
1
Bettina Buchmann , Lubos Polerecky , Christine Heim , Dirk de Beer , Danny Lonescu*
1
2
Max Planck Institute for Marine Microbiology, Germany, University of Goettingen, Germany
425A
Surface Plasmon Resonance assays indicate that NtcA binds several L-amino acids
Laura Calvo, Taís Mayumi Kuniyoshi*, María del Mar Pascual, Andrés González, María Fillat,
Maria Luisa Peleato
Universidad de Zaragoza/Departamento de Bioquímica y Biología Molecular y Celular,
Facultad de Ciencias, Spain,
426A
Response of Prochlorococcus to extended darkness
Allison Coe*, Stephen Biller, Sara Roggensack, Sallie Chisholm
MIT, United States
427A
The phyllosphere: a phototrophic niche?
1
2
2
3
1
Omri Finkel* , Nof Atamna-Ismaeel , Fabian Glaser , Itai Sharon , Ron Schneider , Anton F.
4
5
6
7
8
2
Post , John L. Spudich , Christian von Mering , Julia A. Vofholt , David Iluz , Oded Béjà ,
1
Shimshon Belkin
1
2
Hebrew University of Jerusalem, Israel, Technion – Israel Institute of Technology, Israel,
3
4
University of California, United States, Josephine Bay Paul Center for Comparative
5
Molecular Biology and Evolution, Marine Biology Laboratory, United States, University of
6
Texas-Houston Medical School, United States, Institute of Molecular Life Sciences and Swiss
7
Institute of Bioinformatics, University of Zurich, Switzerland, Institute of Microbiology,
8
Eidgenössische Technische Hochschule, Switzerland, Bar Ilan University, Israel
428A
The Roseobacter clade affiliated (RCA) cluster: Do these microbes conduct aerobic
anoxygenic photosynthesis?
1
2
3
4
Helge-Ansgar Giebel* , Bernd Wemheuer , Sonja Voget , Meinhard Simon
1
University Oldenburg, Institute for Chemistry and Biology of the Marine Environment
2
(ICBM), Germany, Georg-August University of Goettingen, Department of Genomic and
3
Applied Microbiology, Institute of Microbiology and Genetics, Germany, Georg-August
University of Goettingen, Goettingen Genomics Laboratory, Institute of Microbiology and
4
Genetics, Germany, University Oldenburg / Institute for Chemistry and Biology of the Marine
Environment (ICBM), Germany
429A
Inhibition of heterotrophic bacteria by solar radiation in a humic lake
1
1
2
2
2
Jens Glaeser* , Stefanie Glaeser , Franziska Leunert , Ivette Salka , Hans-Peter Grossart
1
2
Justus-Liebig-University, Germany, Leibniz-Institut of Freshwater Ecology and Inland
Fisheries, Germany
430A
Diel cycles of dissolved B-Vitamins in the coastal ocean
1
1
1
1
Laura Gómez-Consarnau* , Lynda Cutter , Jacob A. Cram , David Needham , Guillem
2
1
2
1
Salazar , Jed A. Fuhrman , Josep M. Gasol , Sergio A. Sañudo-Wilhelmy
1
2
University of Southern California, USA, Institut de Ciències del Mar-CSIC, Spain
431A
Comparative proteomics of a green and a purple sulfur bacterium through the light
gradient in the water column of Lake Cadagno, Switzerland
Kirsten S. Habicht*, Lasse G. Falkenby
Univeristy of Southern Denmark, Denmark
432A
Light dependent oxygen consumption in a green sulfur bacteria biofilm from the Dead
Sea
1
1
2
2
1
Stefan Haeusler* , Danny Ionescu , Christian Lott , Miriam Weber , Dirk de Beer
1
2
Max Planck Institute for Marine Microbiology, Germany, HYDRA Institute for Marine
Sciences, Italy
12
PS02 – Light and Microbial Life
Monday 20 August
433A
Summer Solar Radiation effects on autotrophic activity in a high anathalassohaline
evaporitic basin: Salar de Huasco-Chilean Altiplano
1
2
3
4
5
Klaudia Hernandez* , Lasse Olsen , Verónica Molina , Martha Hengst , Chris Harrod ,
6
Cristina Dorador
1
2
Universidad Austral de Chile/CIEN Austral, Chile, Norwegian University of Science and
3
4
Technology, Norway, Universidad Andrés Bello, Chile, Centro de Bioinovación/Facultad de
5
Recursos del Mar/Universidad de Antofagasta, Chile, Queen's University Belfast, United
6
Kingdom, Facultad de Recursos del Mar/Universidad de Antofagasta, Chile
434A
Summer community structure of aerobic anoxygenic phototrophic bacteria in the
western Arctic Ocean
1
1
2
2
Christian Jeanthon* , Dominique Boeuf , Matthew Cottrell , David Kirchman , Philippe
3
Lebaron
1
2
3
Station Biologique, France, University of Delaware, USA, Observatoire de Banyuls, France
435A
Combination of nanoscale zero valent iron and organochlorine respiring bacteria for
the remediation of 1,1,2-trichloroethane and 1,2-dichloroethane mixtures
1
1
1
2
2
Joanna Koenig* , Adrian Low , Matthew Lee , Hardiljeet Boparai , Denis O'Carroll , Michael
1
Manefield
1
2
University of New South Wales, Australia, University of Western Ontario, Canada
436A
Phosphate availability in N:P 40:1 affects mcyD expression and microcystin synthesis
in Microcystis aeruginosa PCC7806
Taís Mayumi Kuniyoshi*, Emma Sevilla, Maria Teresa Bes, María F. Fillat, Maria luisa Peleato
University of São Paulo- USP/ICB2, Universidad de Zaragoza/Departamento de Bioquímica y
Biología Molecular y Celular, Facultad de Ciencias, Spain
437A
Functional proteomics of marine cyanobacterium Synechocystis sp. PCC 6906
1
1
1
1
2
Yeon Ju Kwak* , Soo Jung Kim , Jung Ha Choi , Yeol Gyun Lee , Jong Hyun Kim , Jang Ryol
2
1
1
Liu , Seung Il Kim , Young Ho Chung
1
2
Division of Life Sciences, Korea Basic Science Institute, South Korea, Plant Genomics
Research Center, Korea Research Institute of Bioscience and Biotechnology, South Korea
438A
Widespread occurrence of a novel class of rhodopsins
1
2
2
3
Soon-Kyeong Kwon* , Byung Kwon Kim , Ju Yeon Song , Min-Jung Kwak , Choong Hoon
2
1
4
1
2
Lee , Dae-Hee Lee , Jung-Hoon Yoon , Tae Kwang Oh , Jihyun F. Kim
1
2
Korea Research Institute of Bioscience and Biotechnology, South Korea, Yonsei University,
3
4
South Korea, University of Science and Technology, South Korea, Sungkyunkwan
University, South Korea
4390A Influence of Ultraviolet light protectants on Persistence of Bacillus sp. BS-99
Ching Piao Liu*, Pei Haw Lin
China University of Science and Technology, Dep. Biological Science and
Technology, Taiwan
440A
Metagenomic analysis of aerobic and anaerobic phototrophic communities in a
stratified lake
1
2
3
2
Julia Maresca* , Sean Crowe , Edward DeLong , Donald Canfield
1
2
3
University of Delaware, USA, University of Southern Denmark, Denmark, Massachusetts
Institute of Technology, USA
13
PS02 – Light and Microbial Life
Monday 20 August
441A
Redox proteomics: A new approach to identifying carbonylated proteins as biomarkers
of UVB radiation in the marine bacterium Photobacterium angustum S14
1
1
1
2
Sabine Matallana-Surget* , Charles Fauconnier , Fabien Joux , Ruddy Wattiez , Philippe
1
Lebaron
1
2
Université Pierre et Marie Curie - CNRS - UMR7621, France, Department of Proteomics and
Microbiology, Interdisciplinary Mass Spectrometry Center (CISMa) University of Mons Belgium
442A
Metabolic flexibility and substrate preference by the phototrophic freshwater Fe(II)oxidizer Rhodopseudomonas palustris TIE-1
1
1
2
1
Emily Denise Melton* , Caroline Schmidt , Kirsten Oswald , Sebastian Behrens , Andreas
1
Kappler
1
2
University of Tübingen, Germany, Eawag, Switzerland
443A
Glycogen metabolism of the cyanobacterium Synechococcus sp. PCC 7002
1
1
1
2
Klaus Benedikt Möllers* , Thomas Grochalski , Jacob H. Jacobsen , David Cannella ,
2
1
Henning Jørgensen , Niels Ulrik Frigaard
1
2
Department of Biology, University of Copenhagen, Denmark, Forest and Landscape,
University of Copenhagen, Denmark
444A
Orientation of Mayan monuments as a major determinant in spatial distribution of
aeroterrestrial biofilms
1
2
1
Benjamin Otto Ortega-Morales* , Christine Claire Gaylarde , Manuelita Reyes-Estebanez ,
1
1
1
Armando Anaya-Hernández , Manuel Jesús Chan-Bacab , Susana De la Rosa-García , Diana
1
Arano-Recio
1
Universidad Autónoma de Campeche. Departamento de Microbiologia Ambiental y
2
Biotecnologia, Mexico, University of Portsmouth, United Kingdom,
445A
A xanthorhodopsin-like second bacterial rhodopsin is expressed in the flavobacterium
Dokdonia donghaensis PRO95
1
2
1
1
Thomas Riedel* , Laura Gómez-Consarnau , Jürgen Tomasch , Michael Jarek , Madeleine
1
3
2
1
Martin , Thorsten Brinkhoff , Jed Fuhrman , Irene Wagner-Döbler
1
2
Helmholtz-Centre for Infection Research, Germany, University of Southern California, USA,
3
University of Oldenburg, Germany
446A
Development of lux-based biosensors in Pseudomonas aeruginosa ATCC 9027 for
preservative efficacy testing
Niksha Shah*, David Naseby
University of Hertfordshire, United Kingdom
447A
Metabolic and physiologic effects on Okenone and Bacteriochlorophyll a production in
purple sulfur bacteria
1
2
1
1
1
Derek Smith* , James Scott , Andrew Steele , George Cody , Shohei Ohara , Roxane
1
1
Bowden , Marilyn Fogel
1
2
Carnegie Institution of Washington, USA, Dartmouth College, USA
448A
Photoautotrophic production and heterotrophic decomposition of climate-relevant
halocarbons in Baltic and North Sea surface waters
Christian Stolle*, Anna Orlikowska, Falk Pollehne, Detlef Schulz-Bull, Klaus Jürgens
Leibniz-Institute for Baltic Sea Research Warnemuende, Germany
449A
Is it all light? Mechanisms of virus removal in waste stabilisation ponds
Louise Weaver, Judith Webber, Naveena Karki, Kate Thomas, Margaret MacKenzie, Susan
Lin, Wendy Williamson*
Institute of Environmental Science & Research Ltd, New Zealand
14
PS02 – Light and Microbial Life
Monday 20 August
PS03 – Microbes in a Changing Ocean
297A
Health aspects of dry sand of the beaches in the state of Paraná-Brazil in terms of
mechanical revolving
1
2
2
Sumaia Andraus* , Jair Alves Dionisio , Ida Chapaval Pimentel
1
2
Instituto Ambiental do Paraná, Brazil, Universidade Federal do Paraná, Brazil
298A
Microbial buffering: protecting The Great Barrier Reef against anthropogenic impacts
1
1
2
2
3
Florent Angly* , Candice Heath , Matthew Sullivan , Virginia Rich , Britta Schaffelke , David
3
1
Bourne , Gene Tyson
1
2
3
Australian Centre for Ecogenomics, Australia, University of Arizona, USA, Australian
Institute for Marine Science, Australia
299A
Halotolerant proteases from a marine bacterium: mechanism of halotolerance and tools
for evaluating marine microbial ecology
1
2
Kenji Aoki* , Shinji Takenaka
1
2
Sagami Women's University, Japan, Kobe Univerisity, Japan
300A
Implementation of next-generation sequencing using Nextera on the marine
cyanobacteria Prochlorococcus and Synechococcus
1
2
3
1
Cecilia Batmalle* , Sam Hsin-I , Michael Lomas , Adam Martiny
1
2
University of California Irvine, United States, University of California San Diego, United
3
States, Bermuda Institute of Ocean Sciences, Bermuda
301A
Identification, characterization and partial purification of a novel unmodified bacteriocin
from an Algerian extremely halotorant Oceanobacillus sp. strain
1
2
3
4
Nadia Bouktit* , Pierre Stocker , Michel Fons , Said Benallaoua
1
2
Université A.MIRA, Targa Ouzemour, Béjaia, Algeria, Institut de Chimie Radicalaire UMR
7273, Equipe sonde moléculaire en biologie et stress oxydant (ICR-SMBSO) service 522,
Université Aix-Marseille, Pôle de l'Etoile, Faculté des Sciences et Techniques, Marseille,
3
France, ISM2 UMR 7313, Equipe BiosCiences case 342, Université Aix-Marseille, Pôle de
4
l'Etoile, Faculté des Sciences et Techniques, Marseille, France, Laboratoire de Microbiologie
Appliquée, Département de Microbiologie, Faculté des Sciences de la Nature et de la Vie,
Université A.MIRA, Targa Ouzemour, Béjaia, Algeria
302A
Are potentially pathogenic Vibrio species in German coastal waters and sediments
influenced by climate change?
1
2
2
1
Nicole Brennholt* , Katrin Luden , Ernst-August Heinemeyer , Georg Reifferscheid , Simone
1
Böer
1
2
Federal Institute of Hydrology, Germany, Governmental Institute of Public Health of Lower
Saxony, Germany
303A
Elucidating the impacts of hypoxia on the active microbes that drive nitrogen fixation in
estuarine sediments
1
1
1
2
Shelley Brown* , Andraya Ehrlich , Annaliesa Jones , Christopher Deacutis , Bethany
1
Jenkins
1
2
University of Rhode Island, United States, Narragansett Bay Estuary Program, United States
304A
The relationship between bacterial abundance, activity and growth in marine
environments
Barbara Campbell*, David Kirchman
University of Delaware, United States
15
PS03 – Microbes in a Changing Ocean
Monday 20 August
305A
Communities of Nosz-type denitrifiers in low-oxygen waters of the Colombian Pacific
1
2
3
Maribeb Castro-González* , Efraín Rodríguez-Rubio , Gesche Braker
1
2
Universidad del Tolima, Colombia, Centro de Investigaciones Oceanográficas e
3
Hidrográficas del Pacífico-CCCP, Colombia, Max Planck Institute for Terrestrial Microbiology,
Germany
306A
Inferring the trophic state of the Baltic Sea bacterial communities
1
1
2
2
2
Narin Celepli* , John Larsson , Christopher Dupont , Shibu Yooseph , Johannes Goll ,
2
1
1
1
Mathangi Thiagarajan , Johannes Asplund Samulesson , Björn Brindefalk , Birgitta Bergman ,
1
Karolina Ininbergs
1
2
Stockholm University, Sweden, J Craig Venter Institute, USA
307A
Cold endured, low light adapted and diverse picocyanobacteria isolated from the winter
season of Chesapeake estuary
1
2
2
Feng Chen* , Yongle Xu , Nianzhi Jiao
1
2
University of Maryland Center for Environmental Science, United States, Xiamen
University, China
308A
Mixing of water masses caused by a drifting iceberg affects substrate utilization and
community composition of bacterioplankton in the Southern Ocean
1
2
3
4
5
Julie Dinasquet* , Inga Richert , Ramiro Logares , Stefan Bertilsson , Lasse Riemann
1
2
Linnaeus University - Copenhagen University, Denmark, Uppsala University - Helmholtz
3
Centre for Environmental Research, Sweden, Institure of Marine Sciences, CSIC, Spain,
4
5
Uppsala University, Sweden, Copenhagen University, Denmark
309A
Evidence for complex lifestyles among aquatic bacteria: Switching microhabitats
reversibly changes metabolic capacity of aggregate-associated microbial communities
1
1
2
2
Fred C. Dobbs* , M.M. Lyons , X. Zhao , R.E. Hicks
1
2
Old Dominion University, Norfolk, Virginia, USA, University of Minnesota-Duluth, Duluth,
Minnesota, USA
310A
Diversity and seasonal dynamics of haptophytes in outer Oslo fjorden as revealed by
454 pyrosequencing
1
1
1
1
2
Elianne Egge* , Wenche Eikrem , Tom Andersen , Vladyslave Hostyeva , Lucie Bittner , Torill
3
3
1
Johannesen , Ruth-Anne Sandaa , Bente Edvardsen
1
2
University of Oslo, Department of biology, Norway, University of Kaiserslautern, Department
3
of ecology, Germany, University of Bergen, Department of biology, Norway
311A
Microbial degradation of organic matter under elevated pCO2: an offshore mesocosm
study
Sonja Endres*, Luisa Galgani, Anja Engel
Helmholtz Centre for Ocean Research Kiel (GEOMAR), Germany
312A
The mystery of the unknown: patterns in the global deep ocean heterotrophic
bacterioplankton activity
1
2
1
Ana Gomes* , Xosé Anxelu G. Morán , Josep M. Gasol
1
2
Institut de Ciències del Mar (ICM), CMIMA - CSIC, Spain, Centro Oceanográfico de Gijón,
Instituto Español de Oceanografía, Spain
313A
Occurrence of antibiotic resistance in marine sediments and fauna along an exposure
gradient in Arctic Greenland
Maria Granberg*, Ingela Dahllöf
University of Gothenburg/Dept. of Biology and Environmental Science, Sweden
314A
Bromodeoxyuridine incorporation techniques reveal actively growing bacteria in a
temperate coastal water of Hiroshima Bay, western Japan
1
1
2
Koji Hamasaki* , Yuya Tada , Akito Taniguchi
1
2
Atmosphere and Ocean Research Institute, Japan, Kinki University, Japan
16
PS03 – Microbes in a Changing Ocean
Monday 20 August
315A
Temperature dependence of prokaryotic autotrophy in the meso- and bathypelagic
Atlantic Ocean
Roberta Hansman*, Gerhard Herndl
University of Vienna, Austria
316A
Comparative community genomics of the Northeast subarctic Pacific Ocean
Niels Hanson*, Jody J. Wright, Kishori M. Konwar, Steven J. Hallam
University of British Columbia, Canada
317A
Characterization of microbial communities through space and time after oil spill in
Bohai bay
Xiaoke Hu*, Hui Wang, Jialong Yang
Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, China
318A
Characterization of sulfate-reducing communities using dissimilatory sulfite reductase
(dsr) gene in the finfish (Rock fish and Seabream) aquaculture farm in the southern
coast of Korea
1
1
1
1
1
2
Jung-Ho Hyun* , Ayeon Choi , Hye-Yeon Cho , Bomina Kim , Sunguk An , Won-Chan Lee
1
2
Hanyang University, South Korea, National Fisheries R&D Institute, South Korea
319A
Geographical differentiation of the genome content of the marine cyanobacterium
prochlorococcus
Alyssa Kent*, Adam Martiny
University of California, Irvine, USA
320A
The Baltic Sea microbiome exposed by large-scale environmental sequencing
1
1
1
1
2
John Larsson* , Karolina Ininbergs , Johan Nylander , Narin Celepli , Jarone Pinhassi , Chris
3
3
3
3
1
Dupont , Shibu Yooseph , Johannes Goll , Mathangi Thiagarajan , Birgitta Bergman
1
2
3
Stockholm University, Sweden, University of Kalmar, Sweden, J. Craig Venter Institute,
USA
321A
High frequency sampling of bacterioplankton communities reveals seasonal dynamics
in the baltic sea – implications for long-term shifts in climate
1
2
1
1
Markus V. Lindh* , Anders F. Andersson , Emmelie Nilsson , Federico Baltar , Catherine
1
1
Legrand , Jarone Pinhassi
1
2
Marine Microbiology, School of Natural Sciences, Linnaeus University, Sweden, KTH Royal
Institute of Technology, Science for Life Laboratory, School of Biotechnology, Sweden
322A
Abundance, expression, and diversity of nitrite reductase genes in Gulf of California
and eastern tropical North Pacific oxygen minimum zones
Marie Lund*, Jason M Smith, Jassica A Lee, Christopher A Francis
Stanford University, United States
323A
Dissolved organic matter and sea ice dynamics may explain changes in microbial
community structure along the Western Antarctic Peninsula
1
2
3
4
1
Catherine Luria , Linda Amaral-Zettler , Hugh Ducklow , Daniel Repeta , Jeremy Rich*
1
2
Brown University, USA, Josephine Bay Paul Center, Marine Biological Laboratory, USA,
3
4
Ecosystems Center, Marine Biological Laboratory, USA, Woods Hole Oceanographic
Institution, USA
324A
High viral impact on picoeukaryotic phytoplankton despite phosphate limitation
Douwe Maat*, Corina Brussaard
Royal Netherlands Institute for Sea Research (NIOZ), Netherlands
17
PS03 – Microbes in a Changing Ocean
Monday 20 August
325A
Bacterial hydrolysis of marine particles: identifying temporal breakdown patterns and
species-specific carbon substrate assimilation using stable isotope labeling,
microarrays and nanosims
Xavier Mayali*, Benjamin J. Stewart, Jennifer Pett-Ridge, Peter K. Weber
Lawrence Livermore National Laboratory, USA
326A
The impact of enhanced stratification on the structuring of marine food webs
Kristina Mojica*, Corina Brussaard
Netherlands Institute for Sea Research (NIOZ), Netherlands
327A
Natural ammonium oxidizers' response to chemical changes in the permanent and
seasonal oxygen minimum zones of Chile
1
2
3
3
4
Veronica Molina* , Camila Fernández , Hector Levipan , Osvaldo Ulloa , Tage Dalsgaard , Bo
5
4
Thamdrup , Niels Peter Revsbech
1
2
3
Universidad Andres Bello, Chile, CNRS UMR-7621 Banyuls-Sur-Mer, France, Universidad
4
5
de Concepción Chile, Aarhus University Denmark, University of Southern Denmark Denmark
328A
Metabolic versatility of dominant planktonic sulfur-oxidizing γ-Proteobacteria in a
costal oxygen minimum zone
1
1
2
1
Alejandro Murillo* , Salvador Ramírez-Flandes , Edward DeLong , Osvaldo Ulloa
1
2
Universidad de Concepción, Chile, Massachusetts Institute of Technology, USA
329A
Plastic pollution and marine microbes: Identifying the plastic colonising community in
the ocean
Sonja Oberbeckmann*, A. Mark Osborn
University of Hull, United Kingdom
330A
Transcrioptome Analysis of Light-utilizing Strain Candidatus Puniceispirillum marinum
IMCC1322, a Member of SAR116 Group Bacteria
1
1
2
2
3
Hyun-Myung Oh* , Kaekyoung Kwon , Ahyoung Choi , Dongmin Kang , Yong Hak Kim ,
2
Jang-Cheon Cho
1
2
Korea Ocean Research & Development Institute, South Korea, Inha University, South Korea,
3
Catholic University of Daegu, South Korea
331A
Effect of Oxygen Minimum Zone formation on communities of marine protists
1
2
2
2
2
William Orsi* , Young Song , Alyse Hawley , Monica Torres Beltran , Steven Hallam , Virginia
1
Edgcomb
1
2
Woods Hole Oceanographic Institution, USA, University of British Columbia, Canada
332A
Fungal diversity associated with Brazilian marine sponge Dragmacidon reticulata
1
2
Michel Passarini* , Lara Sette
1
2
Unicamp - Campinas State University, Brazil, Department of Biochemistry and Microbiology UNESP, Brazil
333A
Molecular and culturable analysis of microbial diversity present in highly-coppercontaminated Chilean marine sediments
1
1
2
1
2
Laurent Quillet* , Besaury Ludovic , Marty Florence , Buquet Sylvaine , Muyzer Gerald
1
2
UMR CNRS 6143 Université de Rouen, France, University of Delft, Netherlands
334A
454 pyrosequencing analysis of microbial communities and qPCR detection of
cyanotoxin genes in a marine system in Singapore
1
1
2
3
4
Damien Raingeard , Charmaine Ng* , Peter Steinberg , Ole Larsen , Diane McDougald
1
Advanced Environmental Biotechnology Centre, Nanyang Environment and Research Water
2
Institute, Nanyang Technological University, Singapore, Sydney Institute of Marine Science,
3
Chowder Bay, NSW, Australia, 4DHI-NTU Water & Environment Research Centre and
4
Education Hub, Nanyang Technological University, Singapore, Centre for Marine Biofouling
and Bio-Innovation, School of Biotechnology and Biomolecular Sciences, University of New
South Wales, Sydney, Australia
18
PS03 – Microbes in a Changing Ocean
Monday 20 August
335A
Comparative Genomics within a Coastal SAR11 Population
Michael Rappe*, Jana Grote, Megan Huggett
University of Hawaii, USA
336A
Ocean acidification affects benthic microbial communities along natural pCO2 gradients
associated with shallow tropical gas vents
1
2
2
1
3
1
Felix Raulf* , Katharina Fabricius , Sven Uthicke , Dirk de Beer , Raeid Abed , Antje Boetius ,
1
Alban Ramette
1
2
Max Planck Institute for Marine Microbiology, Germany, Australian Institute of Marine
3
Science, Australia, Sultan Qaboos University, Oman
337A
A microcosm study on oil degrading bacteria of the Archipelago Sea in South-West
Finland
1
2
3
1
Anna Reunamo* , Lasse Riemann , Piia Leskinen , Kirsten S. Jørgensen
1
2
3
Finnish Environment Institute, Finland, University of Copenhagen, Denmark, University of
Turku, Finland
338A
Generalist bacteria colonizing the water masses of the amundsen sea polynya
1
2
3
2
4
Inga Richert* , Julie Dinasquet , Ramiro Logares , Lasse Riemann , Annelie Wendeberg ,
5
Bertilsson Stefan
1
2
Uppsala University, Sweden, Marine Biological Section, University of Copenhagen,
3
4
Denmark, Institute of Marine Sciences, CSIC, Spain, Helmholtz Centre for Environmental
5
Research – UFZ, Germany, Uppsala University, Department of Ecology & Genetics,
Limnology, Sweden
339A
Strongly stratified functional capacities of microbial communities in the Landsort Deep,
Baltic Sea
Sara Sjöling*, Petter Thureborn
Sodertorn University, Sweden
340A
Isolation of anaerobic nitrogen fixers from sediments of Narragansett Bay, RI, USA
Rodrigue Spinette*, Shelley Brown, Annaliese Jones, Bethany Jenkins
University of Rhode Island, USA
341A
Assessing copper stress response in natural communities of marine Synechococcus
1
2
1
1
1
Rhona Stuart* , Kristen Buck , Randelle Bundy , Bianca Brahamsha , Brian Palenik
1
2
Scripps Institute of Oceanography, UC San Diego, USA, Bermuda Institute of Ocean
Sciences, Bermuda
342A
Effects of light on the proteorhodopsin-containing marine gammaproteobacterium
Photobacterium angustum S14 under batch and chemostat conditions
Marcelino Suzuki, Alicia Courties*, Philippe Lebaron
University Paris 6 - Observatory of Banyuls - LOMIC, France
343A
Ecosystem-specific adaptation of Prochlorococcus, SAR11, and viruses in the Red Sea
1
1
2
1
1
1
Luke Thompson* , Matt Cahill , Chris Field , Ali Awami , Markus Hadwiger , Ulrich Stingl
1
2
King Abdullah University of Science and Technology, Saudi Arabia, Dalhousie University,
Canada
344A
Genome characterization of bacterial strains isolated from the biofilm of a
denitrification reactor treating seawater
Richard Villemur*, Céline Villeneuve, Christine Martineau, Florian Mauffrey
INRS-Institut Armand-Frappier, Canada
345A
Comparative community proteogenomics of estuarine and coastal ocean ecosystems
1
1
1
1
2
2
David Walsh* , Anna Georges , Ting Ting Cui , Heba El Swais , Susanne Craig , William Li
1
2
Concordia University, Canada, Bedford Institute of Oceanography, Canada
19
PS03 – Microbes in a Changing Ocean
Monday 20 August
346A
Biogeographic partitioning of Southern Ocean picoplankton
David Wilkins*, Federico M Lauro, Timothy J Williams, Ricardo Cavicchioli
University of New South Wales, Australia
347A
Interactive climate change and runoff consequences alter O2 fluxes and bacterial
community composition of coastal biofilms from the Great Barrier Reef
1
2
3
Verena Witt* , Christian Wild , Sven Uthicke
1
Australian Institute of Marine Science (AIMS)/Leibniz Center of Tropical Ecology (ZMT),
2
3
Germany, Leibniz Center of Tropical Ecology (ZMT), Germany, Australian Institute of Marine
Science (AIMS), Australia
348A
Metagenomic insights on virioplankton biology through nucleic acid and protein
synthesis genes
1
1
2
1
K. Eric Wommack* , Shawn Polson , Shannon J. Williamson , Eric Sakowski , Helen
1
1
1
1
Schmidt , Mara Hyatt , Jeff Wray , Rachel Marine
1
2
University of Delaware, USA, Lake Pend Oreille Waterkeeper, USA
349A
Biodiversity and phylogenetic analysis of culturable bacteria of five brine pools of the
Red Sea
Guishan Zhang*, André Antunes, Yue Guan, Tyas Hikmawan, Uli Stingl
1
Red Sea Research Center, King Abdullah University of Science and Technology (KAUST),
Saudi Arabia
350A
Response of bacterioplankton to glucose gradient without lysis and grazing: who is the
winner in the competition for organic carbon?
1
2
3
Rui Zhang* , Markus Weinbauer , Pei-Yuan Qian
1
2
3
Xiamen University, China, Université Pierre et Marie Curie-Paris 6, France, Hong Kong
University of Science and Technology, China
PS04 – Microbial Community Diversity: 16S and Beyond - Main Authors A – C
248A
Investigation of microbial structure and diversity in the sediment of Mariana trench by
454-pyrosequencing
1
1
1
1
Waleed Abu Al-Soud* , Asker Brejnrod , Martin A. Hansen , Lars H. Hansen , Anders
1
2
3
4
2
Priemé , Mathias Middelboe , Ronnie N. Glud , Hiroshi Kitazato , Søren J. Sørensen
1
2
University of Copenhagen/Department of Biology, Denmark, University of Copenhagen/
3
Marine Biological Section, Denmark, Institute of Biology, University of Southern Denmark,
4
Denmark, Japan Agency for Marine-Earth Science and Technology, Japan
249A
Diversity of picoeukaryotes at an oligotrophic site off the northern Red Sea coast
Francisco Acosta Espinosa*, David Ngugi, Ulrich Stingl
King Abdullah University of Science and Technology, Saudi Arabia
250A
Aromatic biodegradation potential of the anaerobic microbial community from oilpolluted subtidal sediments affected by the Prestige oil spill
1
2
1
Alejandro Acosta González* , Ramón Rosselló-Móra , Silvia Marqués
1
2
Estación Experimental del Zaidín - CSIC, Spain, Institut Mediterrani d'Estudis Avançats,
IMEDEA, Spain
251A
Vibriospecies in biofloc aquaculture systems and their potential as probiotic elements
in shrimp farming
Diana Aguilera-Rivera, Karla Susana Escalante-Herrera, Martha Gabriela Gaxiola-Cortés,
Alejandra Prieto-Davó*
Universidad Nacional Autónoma de México, Mexico
20
PS04 – Microbial Community Diversity
Monday 20 August
252A
Microbiological and Physio-chemical attributes of Hot Springs Water of Jazan City at
the Southern region in Saudi Arabia
Majed Albokari, Ibrahim M. Mashhour*
Atomic Energy Research Institute (AERI), King Abdulaziz City for Science and Technology
(KACST), Saudi Arabia
253A
The evolutionary space of the bacterial 16S rRNA gene. Ver 1.0
1
2
2
1
3
Evgeny Andronov* , Alexander Dolnik , Gayk Tamazyan , Elizabeth Pershina , Kira Vyatkina ,
4
1
Yury Porozov , Alexander Pinaev
1
2
3
4
ARRIAM, Russia, SPbGU, Russia, SPAU, Russia, ITMO, Russia
254A
Isolation of Haloarchaea from Salt Marsh Environments
Roshena Arevalo*, Terry McGenity
School of Biological Sciences, University of Essex, United Kingdom
255A
Soil microbial diversity and greenhouse gas emissions in a California grassland under
precipitation and N deposition manipulation
Emma Aronson*, Anthony Amend, Steven Allison
1
University of California, Irvine, USA
256A
Impact of fish diet on spatial and temporal structure of bacterial populations in
recirculating aquaculture systems, characterised by Ion Torrent sequencing
1
2
3
3
2
Marc Auffret* , Étienne Yergeau , Alexandre Pilote , Émilie Proulx , Charles Greer , Grant
2
1
Vandenberg , Richard Villemur
1
2
INRS-Institut Armand-Frappier, Canada, National Research Council of Canada,
3
Biotechnology Research Institute, Canada, Département des sciences animales, Université
Laval, Canada
257A
Heterotrophic bacteria in a consortium with the bichlorophyllous cyanobacterium
Prochlothrix hollandica
1
1
1
1
Svetlana Averina , Yuliya Chernomorskaya , Alexander Pinevich , Nataliya Velichko* ,
2
Natuschka M. Lee
1
2
Saint Petersburg University, Russia, Technical University of Munich, Germany
258A
Characterization of the virome of raw sewage by Illumina deep sequencing technology
Tiong Gim Aw*, Adina Howe, Joan Rose
Michigan State University, United States
259A
Short-term inhibition impact of antimicrobials on the homoacetogenic and
methanogenic activities of an enriched culture
Sevcan Aydın*, Orhan Ince, E.gozde Ozbayram, Zeynep Cetecioglu, Osman Arıkan, Bahar
Ince
Istanbul Technical University, Turkey
260A
Linking microbial community phylogenetic structure to beta-glucosidic function in soil
aggregates
Vanessa Bailey*, Sarah Fansler, James Stegen, Lee Ann McCue
Pacific Northwest National Laboratory, United States
261A
Differential effects of biochar amendments on microbial communities of agricultural
soils
1
2
2
2
Andrea K Bartram* , Rachel G M Backer , Inna Teshler , Ricardo Fontoura , Hongyuan
2
2
2
1
Deng , Donald L Smith , Joann K Whalen , Josh D Neufeld
1
2
University of Waterloo, Canada, McGill University, Canada
21
PS04 – Microbial Community Diversity
Monday 20 August
262A
Bacterial adaptive response to changing herbicide discharge rates in the streambed
sediments impacted by a landfill
1
2
3
3
Meriç Batıoğlu-Pazarbaşı* , Jacob Bælum , Giovanni Pilloni , Micheal Larentis , Carsten S.
4
3
5
4
Jacobsen , Tillmann Lueders , Lars H. Hansen , Jens Aamand
1
2
Geological Survey of Denmark and Greenland, Denmark, Technical University of Denmark/
3
Nordisk Foundation Center for Biosustainability, Denmark, Helmholtz ZentrumMunchenGerman Research Center for Environmental Health/Institute of Groundwater Ecology,
4
Germany, Geological Survey of Denmark and Greenland/Department of Geochemistry,
5
Denmark, University of Copenhagen/Department of Biology, Denmark
263A
Pyrosequencing analyses of Synechococcus ecological species inhabiting hot spring
microbial mats
1
2
1
3
1
Eric Becraft* , Fred Cohan , Jason Wood , Doug Rusch , Dave Ward
1
2
3
Montana State, United States, Wesleyan, United States, JCVI, United States
264A
Phylogentic analysis of 16S rRNA and nosZ genes from denitrifying bacteria in
groundwater
Maria Ines Bellini*, Ana Fernandez-Scavino, Silvana Tarlera
Facultad de Quimica, Universidad de la Republica, Uruguay
265A
Microbial diversity in anoxic marine lakes of Palau revealed by pyrosequencing
J. Michael Beman*, Michael Dawson, Matthew Meyerhof
University of California, Merced, United States
266A
"Next-base" effect on PCR amplification
1
2
2
Eitan Ben-Dov* , Orr H. Shapiro , Ariel Kushmaro
1
2
Ahva Academic College, Israel, Ben-Gurion University of the Negev, Israel
267A
High-throughput diversity analysis and quality control of environmental data derived
from next-generation sequencing studies
1
2
3
3
Johan Bengtsson* , Martin Hartmann , K. Martin Eriksson , R. Henrik Nilsson
1
2
University of Gothenburg, Sweden, Agroscope Reckenholz-Tänikon Research Station ART
3
and Swiss Federal Research Institute WSL, Switzerland, Dept. of Biological and
Environmental Sciences, University of Gothenburg, Sweden
268A
Variations in bacterial communities in the Vaal River, South Africa as assessed by high
through-put sequencing
Carlos Bezuidenhout*, Karen Jordaan
North-West University: Potchefstroom Campus, South Africa
269A
Diversity of microbial communities decreases as biofilm develops in moving bed
biofilm reactor systems treating wastewater
Kristi Biswas*, Susan Turner
The University of Auckland, New Zealand
270A
Free living and particle associated microbial communities in the north Adriatic Sea
along a transect from Rovinj to the Po river delta
1
2
2
2
2
Mina Bizic-Ionescu , Michael Zeder , Danny Ionescu , John Marshall , Rudolf Amann ,
2
3
3
Bernard M. Fuchs , Mirjana Najdek , Sandi Orlić*
1
Max Planck Institute for Marine Microbiology/Leibniz-Institute of Freshwater Ecology and
2
3
Inland Fisheries, Germany, Max Planck Institute for Marine Microbiology, Germany, Ruđer
Bošković Institute Center for Marine Research, Croatia
271A
Prokaryotic diversity in manganese nodules from the Clarion-Clipperton Zone, Pacific
Ocean
Marco Blöthe*, Axel Schippers
Bundesanstalt für Geowissenschaften und Rohstoffe, Germany
22
PS04 – Microbial Community Diversity
Monday 20 August
272A
Effect of Colletotrichum spp. on endophytic bacterial communities associated to
Amazon guarana revealed by 16S rRNA gene clone libraries
1
1
1
Andréa Cristina Bogas* , Almir José Ferreira , Welington Luiz de Araújo , Francisco André
1
1
2
Ossamu Tanaka , Elliot Watanabe Kitajima , Spartaco Astolfi Filho , Aline Aparecida Pizzirani1
1
Kleiner , João Lúcio de Azevedo
1
2
University of São Paulo, Brazil, Universidade Federal do Amazonas, Brazil
273A
Microbial diversity in coastal microbial mats
Henk Bolhuis*, Lucas Stal
NIOZ-Royal Netherlands Institute for Sea Research, Netherlands
274A
Analysing small genetic elements in metagenomics data
Ida Bonde*, Agnieszka Sierakowska Juncker, Damian Rafal Plichta, Thomas Sicheritz-Pontén,
Henrik Bjørn Nielsen
Technical University of Denmark, Denmark
275A
OPC method – a simple absolute quantification method correcting for quantitative PCR
efficiency
1
2
1
3
Robert Brankatschk , Natacha Bodenhausen , Josef Zeyer , Helmut Bürgmann*
1
2
Institute of Biogeochemistry and Pollutant Dynamics, ETH Zurich, Switzerland, Institute of
3
Microbiology, ETH Zurich, Switzerland, Department of Surface Waters – Research and
Management, Eawag, Swiss Federal Institute for Aquatic Science and Technology Switzerland
276A
Microbiome similarity within villages and across social networks
Ilana Brito*, Eric Alm
Massachusetts Institute of Technology, United States
277A
Bacterial composition of an efficient methanogenic system for treatment of dairy
wastewater assessed by 454-pyrosequencing
Angela Cabezas*, Patricia Bovio, Claudia Etchebehere
Facultad de Ciencias/IIBCE, Uruguay
278A
Bacterial diversity in terrestrial microbial mats from maritime Antarctica by
pyrosequencing: a summer snapshot in an extreme environment
Cecilia Callejas*, Angela Cabezas, Sivia Batista, Claudia Etchebehere
IIBCE, Uruguay
279A
Bacterial consortium for lignocellulose degradation and ethanol production
Lucia Maria Carareto Alves*, Maria Luisa M Almeida, Joice Mariá B Alves, Eliana G M Lemos
Universidade Estadual Paulista - UNESP, Brazil
280A
Bacterial community structure in the phyllosphere of apple and pear trees
Marc Carrasquilla*, Marc Lliros, Núria Gaju, Maira Martínez-Alonso
Autonomous University of Barcelona, Spain
281A
Molecular ecological studies on microbial community of ginseng soil using
pyrosequencing
Chang-Jun Cha, Jung-Hye Choi*, Sang-Min Lee, Sung-Joon Park
Chung-Ang University, South Korea
282A
Bacteria associated with pre-released larvae and ovarian fluid of ovoviviparous china
rockfish Sebastes nebulosus
1
2
3
2
Sage Chaiyapechara , Carolyn S. Friedman , Mike B. Rust , Russell P. Herwig*
1
2
National Center for Genetic Engineering and Biotechnology, Thailand, University of
3
Washington, USA, NOAA Northwest Fisheries Science Center, USA
23
PS04 – Microbial Community Diversity
Monday 20 August
283A
Removal of toxic chemicals from wastewater sludge using alginate microcapsules
Bea-Ven Chang*, Zen-Yi Wang
Department of Microbiology, Soochow University, Taiwan
284A
Enrichment of iron-reducing and iron-oxidizing bacteria in natural uranium ores as
demonstrated by DGGE and pyrosequencing analyses of 16S rRNA genes
1
2
3
4
5
Virginie Chapon* , Laure Mondani , Karim Benzerara , Marie Carrière , Richard Christen ,
6
2
7
2
Laureline Fevrier , Wafa Achouak , Pascal Nardoux , Catherine Berthomieu
1
2
3
CEA/IBEB, France, CEA-CNRS-Université d’Aix Marseille/IBEB, France, CNRS/IMPMC,
4
5
France, CEA/INAC, France, CNRS-Université Nice-Sophia-Antipolis/Centre de Biochimie,
6
7
France, IRSN/SECRE, France, AREVA, France
285A
Community and merA gene diversities of indigenous soil bacterial communities in
industrially mercury polluted areas in the USA and Taiwan
1
2
1
Aspa D. Chatziefthimiou* , Mei-Fang Chien , Tamar Barkay
1
2
Rutgers University/ Department of Biochemistry and Microbiology, USA, Tohoku-Gakuin
University/ Faculty of Engineering and Ehime University/ Center for Marine Environmental
Studies, Japan
286A
Exploring the metagenomic diversity of polyhydroxyalkanoate genes from oilcontaminated soil
1
2
1
1
2
Simrita Cheema* , Monica Bassas-Galia , Priyangshu Sarma , Banwari Lal , Sagrario Arias
1
2
The Energy and Resources Institute, India, Helmholtz Centre for Infection
Research, Germany
287A
Pyrosequencing analysis of 16S rRNA gene amplicons of soil microbial communitie
shows a low reproducibility
Lei Cheng*
University of Oklahoma, United States
288A
Application of DGGE technique for bacterial population from oil reservoir of Northern
Petroleum Development Center
1
2
1
Paweena Choochuay* , Pinan Dawkrajai , Sakunnee Bovonsombut
1
2
Chiang Mai University, Thailand, Northern Petroleum Development Center, Thailand
289A
Rumen microbiome profile during cold stress/adaptation in cattle fed low protein diets
supplemented with dried distillers grain with solubles (DDGS)
1
2
3
1
1
Kane Christiuk* , Riley Hartmann , Jessica D. Forbes , Kim H. Ominski , J. C. Plaizier , Ehsan
1
Khafipour
1
2
Department of Animal Science, University of Manitoba, Canada, Department of Chemistry,
3
University of Manitoba, Canada, Department of Medical Microbiology and Infectious
Diseases, University of Manitoba, Canada
290A
Shifts in archaeal and bacterial community structures of upland soils as affected by
cattle overwintering
1
2
3
1
1
Alica Chronakova* , Brigitte Hai , Christopher Quince , Dana Elhottova , Miloslav Simek ,
2
Michael Schloter
1
2
Biology Centre AS CR, Institute of Soil Biology, Czech Republic, Helmholtz Zentrum
3
München, Research Unit for Environmental Genetics, Germany, University of Glasgow,
Department of Civil Engineering, United Kingdom
291A
Community dynamics of the mouse gut microbiota under dietary intervention
1
1
1
2
3
Feyza Colakoglu* , Yi Vee Chew , Andrew J. Holmes , Samantha Solon , Aisling McMahon ,
3
4
2
David Le Couter , David Raubenheimer , Steve Simpson
1
2
School of Molecular Bioscience, University of Sydney, Australia, Biological Sciences,
3
University of Sydney, Australia, ANZAC Research Institute, University of Sydney, Australia,
4
Massey University, New Zealand
24
PS04 – Microbial Community Diversity
Monday 20 August
292A
Evidence for N2 fixation-mediated methane production in oil sands tailings
C.E. Victoria Collins*, Julia Foght, Tariq Siddique
University of Alberta, Canada
293A
Temporal dynamics of microbial communities in the rhizosphere of two genetically
modified (GM) maize hybrids in tropical agrosystems
1
2
3
3
4
Simone Cotta* , Armando Dias , Ivanildo Marriel , Eliane Gomes , Jan Dirk van Elsas , Lucy
1
Seldin
1
2
3
4
Federal University of Rio de Janeiro, Brazil, USP, Brazil, EMBRAPA, Brazil, University of
Groningen, Netherlands
294A
High-resolution temporal and spatial dynamics of microbial community composition
and function revealed though time-series metagenomics in Trout Bog Lake, WI
1
2
3
2
Benjamin Crary* , Leong-Keat Chan , Ramunas Stepanauskas , Rex Malmstrom , Stefan
4
5
6
7
Bertilsson , Ashley Shade , Jack Gilbert , Katherine McMahon
1
2
University of Wisconsin-Madison, USA, Department of Energy Joint Genome Institute, USA,
3
4
Bigelow Laboratory Single Cell Genomics Center, USA, Department of Ecology & Genetics,
5
Limnology, Uppsala University, Sweden, Department of Molecular Cellular and
6
Developmental Biology, Yale University, USA, Argonne National Laboratory and the
7
University of Chicago, IL, USA, Department of Civil and Environmental Engineering, and
Bacteriology, University of Wisconsin-Madison, USA
295A
Oral biofilms: What you do not know can come back and bite you
Richard Crout*, Tiffany Ngan, Chris Cuff
West Virginia University School of Dentistry, United States
PS05 – Microbial Dispersion and Biogeography - is everything everywhere?
001A
Biogeography of soil microbial communities in Indonesian pine forest soils
1
2
3
4
Rully Adi Nugroho* , Wilfred FM Roling , Nico M van Straalen , Kris H Timotius
1
2
Faculty of Biology, Satya Wacana Christian University, Indonesia, Department of Molecular
3
Cell Physiology, Faculty of Earth and Life Sciences, VU University, Netherlands, Institute of
4
Ecological Science, Faculty of Earth and Life Sciences, VU University, Netherlands, Faculty
of Science and Mathematics, Satya Wacana Christian University, Indonesia
002A
Genetic basis of endophyte community on aspen (Populus tremula) is altered after
introduction of a specialist beetle (Chrysomela tremula)
Benedicte Albrectsen*
Umeå University, Sweden
003A
Distribution patterns of free-living microorganisms in a groundwater ecosystem
Stefano Amalfitano*, Stefano Fazi, Elisabetta Preziosi, Stefano Ghergo, Andrea Del Bon,
Patrizia Casella, Annamaria Zoppini
Water Research Institute - CNR, Italy
26
PS05 – Microbial Dispersion and Biogeography
Monday 20 August
004A
The viable microorganisms of clouds
1
2
3
2
3
Pierre Amato* , Mickaël Vaïtilingom , Eleonore Attard , Muriel Joly , Martine Sancelme ,
4
3
Laurent Deguillaume , Anne-Marie Delort
1
2
CNRS - Blaise Pascal University, France, CNRS - Blaise Pascal University - ICCF/OPGC,
3
4
France, CNRS - Blaise Pascal University - ICCF, France, CNRS - Blaise Pascal University OPGC, France
005A
Naphthalene degrading prokaryotic communities of Arctic and Temperate seas as
discovered by denaturing gradient gel electrophoresis and pyrosequencing
1
2
1
1
Andrea Bagi* , Anders Lanzén , Torleiv Bilstad , Roald Kommedal
1
2
University of Stavanger, Norway, University of Bergen, Norway
006A
Spatial distribution of methanogenic archaea communities in a tropical lake
1
2
3
1
Davi Barreto , Ralf Conrad , Angela Manzolillo Sanseverino , Alex Enrich-Prast*
1
2
Universidade Federal do Rio de Janeiro, Brazil, Max Planck Institute for Terrestrial
3
Microbiology, Germany, Universidade Federal do Rio de Janeiro
007A
Large-scale spatial pattern of soil bacterial diversity over monitored with a high-density
microarray
1
2
3
4
Jean-Sebastien Beaulne* , Sebastien Cecillon , Saliou Fall , Elisabeth Navarro , Pascal
5
1
Simonet , Timothy Vogel
1
2
3
4
Université de Lyon, France, Ecole Centrale de Lyon, France, Senegal, IRD, France,
5
CNRS, France
008A
Spatio-temporal evolution of Bradyrhizobium populations associated with the legume
tree Acacia mangium
1
2
2
3
4
Gilles Bena* , Marie-Mathilde Perrineau , Yves Prin , Aliou Faye , Sergio de Faria , Antoine
2
2
5
6
Galiana , Christine Leroux , Paul Redell , Doreen Goh
1
2
3
4
5
IRD, Morocco, CIRAD-LSTM, France, ISRA, Senegal, EMBRAPA, Brazil, Ecobiotics,
6
Australia, Innoprise, Malaysia
009A
The role of predation and dispersal for bacterialmetacommunity dynamics
1
2
3
3
Merce Berga* , Örjan Östman , Eva S. Lindström , Silke Langenheder
1
2
Uppsala University, Sweden, Uppsala Universtiy. Dept. of Ecology and Genetics/ Populaition
3
biology and conservation biology, Sweden, Uppsala University. Dept. of Ecology and
Genetics/Limnology, Sweden
010A
Prokaryotic community composition across the oceanic provinces in the Atlantic
1
2
2
2
2
Kristin Bergauer* , Beate Husain , Claudia Sulzer , Juan A. Garcia , Harald Gruber - Vodicka ,
2
Gerhard J. Herndl
1
2
University of Vienna/Department of Marine BIology, Austria, University of Vienna / Faculty of
Life Sciences, Austria
011A
Exhaustive biogeographical survey of Cryptophytes diversity in 20 open-oceans
ecosystems using Illumina sequencing
1
2
2
2
3
Lucie Bittner* , Fabrice Not , Stephane Audic , Colomban de Vargas , Julie Poulain , Patrick
3
1
Wincker , Thorsten Stoeck
1
2
University of Kaiserslautern, Germany, Station Biologique de
3
Roscoff, France, Genoscope, France
012A
Comparison between particle-associated bacteria in limnic and marine systems
1
2
3
4
1
Mina Bižić-Ionescu* , Michael Zeder , John Marshall , Sandi Orlic , Rudolf Amann , Bernhard
1
5
M. Fuchs , Hans-Peter Grossart
1
2
Max Planck Institute for Marine Microbiology, Germany, University of Zurich, Switzerland,
3
4
5
University of Bremen, Germany, Ruđer Bošković Institute, Croatia, Leibniz-Institute of
Freshwater Ecology and Inland Fisheries, Germany
27
PS05 – Microbial Dispersion and Biogeography
Monday 20 August
013A
Growth response of lake water bacterial communities to different pH
Erland Bååth*, Emma Kritzberg, Daniel Laster Grip
Lund University, Dep. Biology/Aquatic Ecology, Sweden
014A
Seasonality in the main dispersal routes of bacteria to lakes
Jérôme Comte, Ina Severin, Eva Lindström*
Uppsala University, Sweden
015A
Recruitment of marine taxa from seed-banks in freshwater ecosystems
Jérôme Comte, Eva Lindström, Alexander Eiler, Silke Langenheder*
Uppsala University, Department of Ecology and Genetics/Limnology, Sweden
016A
Bacterial community variability across ten years and five depths at the San Pedro
Ocean Time Series (SPOTS)
1
1
1
1
2
1
Jacob Cram* , Rohan Sachdeva , Cheryl Chow , Li Xia , Joshua Steele , David Needham ,
1
1
Alma Parada , Jed Fuhrman
1
2
University of Southern California, USA, California Institute of Technology, USA
017A
Microbial community structure and metagenomics across the river-to-ocean continuum
of the Amazon River
1
1
1
2
3
Byron Crump* , Mary Doherty , Caroline Fortunato , Alex Krusche , Daímio Brito , Alan
3
4
5
6
5
Cunha , Marcelo Fernandez , Brandon Satinsky , Brian Zielinski , Christa Smith , Nicholas
7
7
5
Ward , Jeffrey Richey , Patricia Yager
1
2
University of Maryland Center for Environmental Science, USA, CENA-USP, Brazil,
3
4
5
Universidade Federal do Amapá, Brazil, Embrapa Tabuleiros Costeiros, Brazil, University of
6
7
Georgia, USA, University of South Florida, United States, University of Washington, USA
018A
Phototrophic protist communities in Gulf of Maine unveiled by way of 18srRNA and
psbA transcripts
1
1
2
Cindy Dasilva* , Connie Lovejoy , W.k.w. Li
1
2
Laval University, Canada, Bedford Institute of Oceanography, Canada
019A
Molecular ecology of Penicillium species recovered from indoor environment
Domenico Davolos*, Biancamaria Pietrangeli
INAIL, Department of Productive Plants and Interaction with the Environment (DIPIA), Italy
020A
Microbial engineers in the Chesapeake Bay Estuary: dynamically shifting communities
with changing metabolic capacities
Mary Doherty*, Byron Crump, Jeffrey Cornwell, Dong Y. Lee
University of Maryland Center for Environmental Science, USA
021A
Starting to unravel the layer of life on surfaces in the sea - metagenomics of complex
marine biofilm communities
Karl Martin Eriksson*, Kemal Sanli, Johan Bengtsson, R. Henrik Nilsson, Magnus Alm
Rosenblad, Hans Blanck
University of Gothenburg, Sweden
022A
Database search bias and undersampling may significantly influence the observed
distribution of microorgansisms - a case study of the form genus Synechococcus
(Cyanobacteria)
1
2
3
1
2
Tamas Felfoldi* , Boglarka Somogyi , Zsolt Gyula Keresztes , Anna Hegyi , Lajos Voros ,
1
Karoly Marialigeti
1
2
Department of Microbiology, Eotvos Lorand University, Hungary, Balaton Limnological
Institute, Centre for Ecology Research, Hungarian Academy of Sciences, Hungary,
3
Department of Experimental Biology, Babes-Bolyai University, Romania
28
PS05 – Microbial Dispersion and Biogeography
Monday 20 August
023A
Distance-decay diversity patterns of phyllosphere bacteria on Tamarisk trees across
the Sonoran Desert
1
2
1
3
2
Omri Finkel* , Adrien Y. Burch , Tal Elad , Susan M. Huse , Steven E. Lindow , Anton F.
3
1
Post , Shimshon Belkin
1
2
3
Hebrew University of Jerusalem, Israel, University of California, USA, Josephine Bay Paul
Center for Comparative Molecular Biology and Evolution, Marine Biology Laboratory, USA
024A
Seasonal variation of indoor microbial exposures and their relations to air temperature,
relative humidity and air exchange rates
1
2
3
2
3
Mika Frankel* , Sine Gustavsen , Michael Timm , Gabriel Bekö , Erik Hansen , Anne Mette
1
Madsen
1
2
National Research Center for the working environment, Denmark, Technical University of
3
Denmark, Denmark, University of Copenhagen, Denmark
025A
Factors affecting microbial community assembly during succession on the egg surface
of the Lake Sturgeon: the relative importance of stochastic and deterministic processes
Masanori Fujimoto*, Kim Scribner, Terence Marsh
Michigan State University, USA
026A
Human microbiota drives indoor air microbes
1
1
2
2
1
Carole Gaüzère* , Marina Moletta , Jérôme Hamelin , Jean Jacques Godon , Enric Robine
1
2
CSTB, France, INRA, France
027A
Microbial biogeography across the seven seas
1
2
3
1
Sean Gibbons* , J. Gregory Caporaso , Rob Knight , Jack Gilbert
1
2
3
Argonne National Laboratory, United States, Northern Arizona University, United States, UC
Boulder, United States
028A
Comparative analysis of marine bacterial communities from Arctic and Antarctic
1
1
1
2
3
Lea Hansen* , Peter Holmsgaard , Lars Hansen , Anders Norman , Simon Rasmussen ,
3
3
1
4
Nikolaj Blom , Thomas Sicheritz-Ponten , Lasse Riemann , Russell Neches , Jonathan
4
5
1
Eisen , Jeff Bowman , Søren Sørensen
1
2
3
University of Copenhagen, Denmark, UC Berkley, Denmark, Technical University of
4
5
Denmark, Denmark, UC Davis, Denmark, University of Washington, United States
029A
Biogeography of the attached-living planctomycete Rhodopirellula spp. in European
coastal sediments
Jens Harder*, Marina Zure
Max-Planck-Institute for Marine Microbiology, Germany
030A
Driving force behind speciation of thermophilic cyanobacteria in hot spring microbial
mats
Shin Haruta*, Mizuki Kawai, Katsumi Matsuura
Tokyo Metropolitan University, Japan
031A
New insights into diversity and biogeography of marine actinobacteria
Ying Huang*, Lijun Xi, Limin Zhang, Jisheng Ruan
Institute of Microbiology, Chinese Academy of Sciences, China
032A
Evidence demonstrating substrate supply and presence of possible inhibitory
substance may determine habitat for anammox population in a shallow eutrophic lake
1
2
2
3
4
Takuya Ikeda* , Ryuji Kondo , Yumi Mori , Takao Yamagishi , Chie Katsuyama , Shingo
5
6
4
Ueda , Ikuo Yoshinaga , Yuichi Suwa
1
2
Chuo University, Japan, Department of Marine Bioscience, Fukui Prefectural University,
3
Japan, Research Institute for Environmental Management Technology, National Institute of
4
Advanced Industrial Science and Technology, Japan, Department of Biological Sciences,
5
Faculty of Science and Technology, Chuo University, Japan, College of Bio-Resource
6
Sciences, Nihon University, Japan, Graduate School of Agriculture, Kyoto University, Japan
29
PS05 – Microbial Dispersion and Biogeography
Monday 20 August
033A
Soil microbial communities from single aggregates distributed at the millimeter scale
1
2
Sarah Jennings* , George Kowalchuk
1
2
Netherlands Institute of Ecology, Netherlands, Vrije Universiteit Amsterdam, Netherlands
034A
Diversity and metabolic potential of microbes in air
1
1
1
2
1
Valdis Krumins* , Gediminas Mainelis , Lee Kerkhof , Valarae Partee , Donna Fennell
1
2
Rutgers, United States, University of Georgia, United States
035A
High throughput sequencing of Ethiopian soda lakes reveals contrasting microbial
communities
Anders Lanzén*, Lise Øvreås
University of Bergen, Norway
036A
The biogeography of stream bacteria
1
2
3
1
1
2
Gavin Lear* , Vidya Washington , Martin Neale , Brad Case , Hannah Buckley , Gillian Lewis
1
2
3
Lincoln University, New Zealand, Auckland University, New Zealand, Auckland Council,
New Zealand
037A
Metagenomic and metaproteomic analyses of marine biofilms
1
1
2
1
1
Dagmar Leary* , W. Judson Hervey , Robert W. Li , Nikolai Lebedev , Leila J. Hamdan ,
1
1
1
Jeffrey R. Deschamps , Anne W. Kusterbeck , Gary J. Vora
1
2
Naval Research Laboratory, USA, Bovine Functional Laboratory, USDA, USA
038A
Dynamics of freshwater microbial communities in two different rivers exposed to
sewage effluent in novel in situ mesocosms
1
2
3
4
5
3
Katja Lehmann , Thomas Bell* , Michael Bowes , William Gaze , David Bass , Dawn Field ,
3
Andrew Singer
1
2
3
University of Oxford, United Kingdom, Imperial College London, United Kingdom, NERC 4
Centre for Ecology & Hydrology, United Kingdom, European Centre for Environment and
5
Human Health, United Kingdom, Natural History Museum, United Kingdom
039A
Distance decay of similarity in microbial communities in the floral nectar of the beepollinated forest herb Pulmonaria officinalis
1
1
2
2
1
Marijke Lenaerts , Bart Lievens* , Rein Brys , Olivier Honnay , Kris Willems , Hans
2
Jacquemyn
1
Laboratory for Process Microbial Ecology and Bioinspirational Management-Consortium for
2
Industrial Microbiology and Biotechnology (CIMB)- KU Leuven Association, Belgium, Plant
Conservation and Population Biology, KU Leuven, Belgium
040A
Assessment of the ecological factors governing the bioconversion of coal to methane
1
2
3
1
Christopher N. Lyles* , Victoria A. Parisi , William H. Beasley , Joy D. Van Nostrand , Jizhong
1
1
Zhou , Joseph M. Suflita
1
2
University of Oklahoma, United States, ConocoPhillips, Geological Technology, United
3
States, Howard Live Oak, LLC, United States
041A
Bacterial communities in the Baltic Sea basin reflect its history
1
1
1
1
2
Christina Lyra* , Hanna Sinkko , Matias Rantanen , Lars Paulin , Aarno Kotilainen
1
2
University of Helsinki, Finland, Geological Survey of Finland, Finland
042A
Dynamics of microbial community assembly in a novel model system: the phyllosphere
of Arabidopsis thaliana
Loïs Maignien*, Emelia DeForce, Meghan Chafee, Sheri Simmons
Bay Paul Center, Marine Biological Laboratory, USA
043A
Investigation of microorganisms causing malodor of laundry
1
1
1
1
2
Asako Mitani* , Hiromi Kubota , Kohei Takeuchi , Yuu Niwano , Yoshiaki Kawamura , Noriko
1
1
Yamaguchi , Jun Hitomi
1
2
Kao corporation, Japan, Aichigakuin University, Japan
30
PS05 – Microbial Dispersion and Biogeography
Monday 20 August
044A
Microbial diversity along a terrestrial-aquatic continuum
1
2
3
4
5
Cécile Monard* , Stephan Gantner , Sara Hallin , Stefan Bertilsson , Jan Stenlid
1
2
3
Swedish University of Agricultural Sciences, Sweden, SLU, Sweden, SLU - Department of
4
5
Microbiology, Sweden, Uppsala University, Sweden, SLU - Department of Forest Mycology
and Plant Pathology, Sweden
045A
Phylogeography of thermophilic bacterial spores in marine sediments: bioindicators for
microbe dispersal in the oceans
1
2
3
2
Albert Müller* , Júlia Rosa de Rezende , Casey Hubert , Kaspar Urup Kjeldsen , Michael
1
2
1
Wagner , Bo Barker Jørgensen , Alexander Loy
1
Department of Microbial Ecology, Faculty of Life Sciences, University of Vienna, Austria,
2
Center for Geomicrobiology, Department of Biological Sciences, Aarhus University, Denmark,
3
School of Civil Engineering and Geosciences, Newcastle University, United Kingdom
046A
Buildings as metacommunities
Timothy O'Connor*, Jessica Green, Brendan Bohannan, Charlie Brown, Steven Kembel, Jeff
Kline, Maxwell Moriyama, Ann Womack
University of Oregon, United States
047A
Spatial and temporal scaling for studying long-term continental microbial ecology
Jacob Parnell*
National Ecological Observatory Network, USA
048A
Wastewaters, a source of highly diversified Pseudomonas aeruginosa leading to an
outdoor dissemination of clinical lineages showing recent DNA rearrangements
1
1
1
2
3
3
1
Stephanie Petit* , R Lavenir , C Colinon , G Fantino , P Cholley , X Bertrand , J Freney , A
1
1
4
1
5
1
Doléans-Jordheim , S Nazaret , L Schmitt , B Moulin , P Breil , B Cournoyer
1
2
University of Lyon, UMR CNRS 5557, France, Ecole Normale Supérieure de Lyon - CNRS,
3
4
5
France, University of Besançon, France, University of Strasbourg- CNRS, France, IRSTEA,
France
049A
Effects of tidal resuspension on benthic microalgal community structure and the
applicability of neutral community models
1
2
1
Craig Plante* , Virginia Fleer , Martin Jones
1
2
College of Charleston, USA, Northwest Missouri State University, USA
050A
Relative abundance data are essential to accurately reflect beta-diversity in microbial
communities
Jeff Powell*
University of Western Sydney / Hawkesbury Institute for the Environment, Australia
051A
Distinct colonization patterns for prokaryotes and microbial eukaryotes during epilithic
biofilm formation
1
2
1
1
Marie Ragon* , Gwendal Restoux , David Moreira , Purificación López-García
1
2
CNRS, France, University Paris Sud, France
052A
Soil microbial communities in grasslands - spatial and temporal patterns at the local
scale
1
2
1
1
3
Kathleen Regan* , Markus Steffens , Doreen Berner , Runa Boeddinghaus , Daniel Prati ,
3
3
1
1
Barbara Schmitt , Steffen Boch , Ellen Kandeler , Sven Marhan
1
2
University of Hohenheim/Institute of Soil Science and Land Evaluation, Germany, Technical
3
University Munich/Ecology and Ecosystem Management, Germany, University of
Bern/Institute of Plant Sciences, Switzerland
053A
Spatial and temporal characterization of bacterial metapopulations reveals dispersal
and habitat limitations in interconnected freshwater ecosystems
Luis M Rodriguez-R*, Despina Tsementzi, Chengwei Luo, Konstantinos Konstantinidis
Georgia Institute of Technology, United States
31
PS05 – Microbial Dispersion and Biogeography
Monday 20 August
054A
Investigation of neutrophilic iron bacteria communities in Tierra del Fuego wetlands
1
2
3
1
2
Bertram Schmidt* , Leandro Sánchez , Gastón Kreps , Till Fretschner , Marcela Ferrero ,
2
1
Faustino Sineriz , Ulrich Szewzyk
1
2
Berlin Institute of Technology / Environmental Ecology, Germany, Planta Piloto de Procesos
3
Industrials Microbiologicos (PROIMI), Argentina, Centro Austral de Investigaciones
Científicas (CADIC), Argentina
055A
Dispersal and the association between community composition and functioning
Ina Severin*, Örjan Östman, Eva Lindström
Uppsala University, Sweden
056A
Evidence for interactions between surface water and periphyton biofilms in artificial
streams
1
1
1
1
2
Orin Shanks* , Peed Lindsay , Catherine Kelty , Mano Sivaganesan , Thomas Mooney ,
1
Christopher Nietch
1
2
U.S. EPA, United States, University of Cincinnati, United States
057A
Microbial community diversity across vertical and geographic gradients in deep-sea
hydrothermal plumes
Cody Sheik*, Karthik Anantharaman, Gregory Dick
University of Michigan, United States
058A
Distribution and composition of bacterial communities in relation to water mass
characteristics in the Sargasso Sea
1
2
3
Johanna Sjöstedt* , Peter Munk , Lasse Riemann
1
2
3
Linnaeus University, Sweden, Technical University of Denmark, Denmark, University of
Copenhagen, Denmark
060A
Genegeography of N2O potential emissions across land-use intensification gradient in
subtropical soils of Southern Brazil
1
1
1
2
1
Dennis Souza* , Clovis Borges , Lina Wong , Dilmar Baretta , Siu Mui Tsai
1
2
Universidade de São Paulo - USP, Brazil, Universidade do Estado de Santa Catarina UDESC, Brazil
061A
Quantifying the influences of ecological drift, selection and dispersal in subsurface
meta-communities
James Stegen*, Xueju Lin, Jim Fredrickson, Xingyuan Chen, David Kennedy, Christopher
Murray, Mark Rockhold, Allan Konopka
Pacific Northwest National Laboratory, United States
062A
Biogeography of soil Burkholderia populations
Nejc Stopnisek*, Leo Eberl, Laure Weisskopf
Institute of Plant Biology, University of Zurich, Switzerland
063A
Revisiting the microbial biogeography debate: evidence for bipolarity in marine bacteria
1
2
1
1
1
Woo Jun Sul* , Thomas Oliver , Hugh Ducklow , Linda Amaral-Zettler , Mitchell Sogin
1
2
Marine Biological Laboratory, United States, University of Hawaii, United States
064A
Mechanisms determining the fate of dispersed bacterial communities: how can
dispersal lead the way towards generalists' supremacy?
Anna J Szekely*, Merce Berga, Silke Langenheder
Uppsala University, Sweden
065A
Pyrosequencing reveals regional differences in vine-associated yeast communities
Mike Taylor*, Nicole Anfang, Amali Thrimawithana, Peter Tsai, Howard Ross, Matthew
Goddard
University of Auckland, New Zealand
32
PS05 – Microbial Dispersion and Biogeography
Monday 20 August
066A
Statistical mathematics of geophysical constraints on subseafloor microbial biomass
and community structure
Taishi Tsubouchi*, Yuki Morono, Tadashi Maruyama, Yuji Hatada, Fumio Inagaki
Japan Agency for Marine-Earth Science and Technology, Japan
067A
A longitudinal asessment of microbial exposures in schools in relation to moisture
damage and dampness
1
2
3
2
1
Martin Täubel* , José Jacobs , Alicia Borras , Esmeralda Krop , Juha Pekkanen , Jan-Paul
3
2
1
Zock , Dick Heederik , Anne Hyvärinen
1
National Institute for Health and Welfare, Department Environmental Health, Finland,
2
Institute for Risk Assessment Sciences (IRAS), Division Environmental Epidemiology, Utrecht
3
University, Netherlannds Centre for Research in Environmental Epidemiology (CREAL) Spain
068A
Biofilm microbial communities of two man-made lakes at Lokpa, Umuchieze Abia State
Nigeria
Ositadinma Ugbogu*, Reginald Onyeagba, Victor Nwaugo
Abia State University, Nigeria
069A
Spatial scaling of functional gene diversity in wastewater treatment plants
1
1
2
2
Xiaohui Wang* , Xianghua Wen , Ye Deng , Jizhong Zhou
1
2
Tsinghua University, China, University of Oklahoma, USA
070A
Factor analysis of soil microbial community structure in introduced species Pinus
elliottiiplantation in red soil in Southern China
Yun Wang*, Zhiyun Ouyang, Hua Zheng, Falin Chen
Research Center for Eco-environmental Sciences, Chinese Academy of Sciences, China
071A
Biogeographical patterns of bacterial communities of paddy soils in Korea
Hang-Yeon Weon*, Jae-Hyung Ahn, Byung-Yong Kim, Jaekyeong Song
National Academy of Agricultural Science, South Korea
072A
Putting social microbes on the map: a genomics approach
1
2
1
Sébastien Wielgoss* , Hansrainer Peitz , Gregory Velicer
1
2
ETH Zürich, Switzerland, Indiana University, USA
073A
Global dispersion of bacterial cells on Asian dust
1
1
2
1
1
Nobuyasu Yamaguchi* , Tomoaki Ichijo , Akiko Sakotani , Takashi Baba , Masao Nasu
1
2
Osaka University, Japan, Osaka Ohtani University, Japan
074A
Effects of diversity and dispersal on bacterial community composition and ecosystem
functioning
Yinghua Zha*, Mercè Berga, Jérôme Comte, Silke Langenheder
Uppsala University, Sweden
33
PS05 – Microbial Dispersion and Biogeography
Monday 20 August
PS06 – Microbial Gradient Communities
183A
Role and distribution of benthic prokaryotes in nitrogen cycle in two sites of the bay of
Marennes-Oleron (France) differing in particle size: comparison between sandy and
muddy tidal flats
1
2
2
1
1
Helene Agogue* , Jun Gong , Xiaoli Zhang , Vanessa Becquet , Christine Dupuy
1
2
UMR LIENSs (CNRS - La Rochelle University), France, Laboratory of Environmental
Microbiology, Yantai Institute of Coastal Zone Research, China
184A
Microbial communities related to methane cycle in Lake Kinneret (Sea of Galilee, Israel)
sediment
1
1
1
2
1
Itay Bar Or* , Orit Sivan , Eitan Ben Dov , Werner Eckert , Ariel Kushmaro
1
2
Ben-Gurion University of the Negev, Israel, Israel Oceanographic and Limnological
Research, Israel
185A
Posttranslational modification of proteins by nitric oxide is linked to induction of
superinfective phage and seeding dispsersal in Pseudomonas aeruginosa
1
1
1
2
1
Nicolas Barraud* , Anne Mai-Prochnow , Janice Hui , Alain Filloux , Scott Rice , Staffan
1
Kjelleberg
1
2
University of New South Wales, Australia, Imperial College, United Kingdom
186A
Competition between denitrification and dissimilatory nitrate reduction to ammonium in
marine sediments
Anna Behrendt*, Dirk de Beer, Peter Stief
Max Planck Institute for Marine Microbiology, Germany
187A
Primary succession of bacteria on kelp surfaces
1
2
2
2
Mia M. Bengtsson* , Kjersti Sjøtun , Anders Lanzén , Lise Øvreås
1
2
University of Vienna, Austria, University of Bergen, Norway
188A
A multi-scale in situ analysis of oxygen transport and consumption in thermophilic,
archaeal dominated acid iron-oxide mats
1
2
3
1
Hans Bernstein* , Jacob Beam , William Inskeep , Ross Carlson
1
2
Montana State University; Center for Biofilm Engineering, United States, Montana State
3
University, United States, Montana State University; Thermal Biology Institute, United States
189A
Sedimentary microorganism response to a sediment re-suspension event: a laboratory
study
Paula Carpintero de Moraes*, Paulo Sumida, Ana Carolina Godoi, Vivian Helena Pellizari
Universidade de São Paulo/Oceanographic Institute, Brazil
190A
N-related prokaryotic communities diversity among depthgradient in an Atlantic
intertidal mudflat
Lavergne Céline*, Agogué Hélène, Beaugeard Laureen, Dupuy Christine
LIENSS La Rochelle University, France
191A
Anaerobic denitrifying methane oxidation in a deep oligotrophic freshwater lake
1
2
1
Jörg Deutzmann* , Peter Stief , Bernhard Schink
1
2
Universität Konstanz, Germany, Max Plank Institut Bremen, Germany
192A
Dynamic microbial niches structured by sulfur and oxygen gradients during the
degradation of marine sunken wood
Sonja Fagervold*, Dimitri Kalenitchenko, Mustafa Yucel, Nadine Lebris, Pierre E. Galand
Observatoire Océanologique de Banyuls - UPMC, France
33
PS06 – Microbial Gradient Communities
Monday 20 August
193A
Stream-bed microbial community structure and function during experimental stream
ecosystem succession
1
2
2
1
Aline Frossard* , Linda Gerull , Michael Mutz , Mark O. Gessner
1
2
Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Germany, Brandenburg
University of Technology, Germany
194A
The important role of heavy metals in shaping the dynamics and distribution of
nitrogen-cycling microbes in estuarine sediments
1
1
2
2
Jun Gong* , Xiaoli Zhang , Hélène Agogué , Christine Dupuy
1
2
Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, China, Littoral,
Environnement et Sociétés (LIENSS) UMR 7266 CNRS – Université de La Rochelle, France
195A
Neutrophilic iron oxidizers adapted to highly oxic environments
Arda Gülay*, Sanin Musaovic, Hans-Jørgen Albrechtsen, Barth F. Smets
Denmark Technical University, Denmark
196A
Effects of chemical contamination on sediment microbial diversity
1
2
3
4
Assia Kaci-Benaicha* , Dominique Boust , Patrick Lesueur , Céline Roose-Amasaleg ,
5
1
1
Sébastien Cécillon , Fabienne Petit , Thierry Berthe
1
2
3
Université de Rouen, France, IRSN Cherbourg, France, Université de Caen, France,
4
5
Université Pierre et Marie Curie, Paris, France, Ecole Centrale de Lyon, France
197A
Biofilm formation at the oxic-anoxic interface of liquid manure
Rikke Markfoged*, Lars Peter Nielsen, Niels Peter Revsbech
Aarhus University / Department of Bioscience, Denmark
198A
Microbe-Mineral Interaction: How Indigenous Microbial Communities in Deep Karst
Sinkholes (Cenotes) Respond to Minerals that are Lacking from these Systems
1
1
1
1
Anni Moore* , Melissa Lenczewski , Melvin Duvall , Andrew Krmenec , Rosamaria Leal
2
Bautista
1
2
Northern Illinois University, USA, Centro de Investigación Científica de Yucatán A.C., Mexico
199A
The role of microbes in TĀLER: Terrestrial Aquatic Linkages for Ecosystem Recovery
1
2
2
3
Nadia Mykytczuk* , Caroline Sadlier , Erik Szkokan-Emilson , David Kreutzweiser , John
2
Gunn
1
2
McGill University, Canada, Living with Lakes Centre, Laurentian University, Canada,
3
Canadian Forest Service, Natural Resources Canada, Canada
200A
Dramatic shifts in bacterial taxonomy and function driven by riverine input and salinity
1
1
2
2
1
Kelly Newton* , Renee Smith , Thomas Jeffries , Justin Seymour , Laurent Seuront , James
1
Mitchell
1
2
Flinders University, Australia, University of Technology Sydney, Australia
201A
Characterising the earthworm microbiome in an extreme arsenic environment
1
1
2
1
Daniel Pass* , Andrew Weightman , Dawn Field , Peter Kille
1
2
Cardiff University, United Kingdom, Centre for Ecology and Hydrology, United Kingdom
202A
Impact of copper on the abundance and diversity of sulfate reducing microorganism in
two Chilean marine sediments
1
1
2
1
1
Laurent Quillet* , Besaury Ludovic , Ouddane Baghdad , Bruneau Carole , Mesnage Valerie
1
2
UMR CNRS 6143 Université de Rouen, France, Université de Lille Equipe Chimie Analytique
et Marine, France
34
PS06 – Microbial Gradient Communities
Monday 20 August
203A
Development and succession of electrogenic microbial communities in marine
sediment
1
1
2
1
2
Regina Schauer* , Steffen Larsen , Kasper U. Kjeldsen , Jesper J. Bjerg , Lars Schreiber ,
2
1
1
Nils Risgaard-Petersen , Lars Peter Nielsen , Andreas Schramm
1
2
Aarhus University, Department of Bioscience, Microbiology, Denmark, Aarhus University,
Center for Geomicrobiology, Department of Bioscience, Denmark
204A
Anaerobic transformation of monochlorobenzene in a model constructed wetland
Marie Schmidt*, Diana Wolfram, Barbara Sophia Klein, Sameer Devakota, Jan Birkigt, HansH. Richnow, Ivonne Nijenhuis
1
Helmholtz Centre for Environmental Research - UFZ, Germany
205A
Phylogenetic analysis of a microbialite-forming microbial mat from a hypersaline lake
on the atoll of Kiritimati, Central Pacific
1
2
3
2
1
Dominik Schneider* , Andreas Reimer , Danny Ionescu , Gernot Arp , Rolf Daniel
1
Georg-August University of Göttingen / Institute of Microbiology and Genetics, Germany,
2
3
University of Göttingen / Geoscience Centre, Germany, Max-Planck-Institute for Marine
Microbiology, Germany
206A
In-depth survey of the Bacteria diversity in oxic and anoxic peat layers of northern
wetlands
1
2
1
Yulia Serkebaeva* , Werner Liesack , Svetlana Dedysh
1
2
Winogradsky Institute of Microbiology, RAS, Moscow, Russia, Max-Planck-Institut für
Terrestrische Mikrobiologie, Germany
207A
Microbiology of South African fynbos riparian ecotones invaded by non-indigenous
Acacias
Etienne Slabbert*, Karin Jacobs, Shayne Jacobs
1
Stellenbosch University, South Africa
208A
Effect of ocean dumping on benthic microbial communities - Fine scale investigations
in the German Bight
Rebecca Störmer*, Antje Wichels, Gunnar Gerdts
Alfred Wegener Institute for Polar and Marine Research, Germany
209A
Comparison of oxygen uptake kinetics of planktonic communities in Oxygen Minimum
Zones
Laura Tiano*, Tage Dalsgaard, Niels Peter Revsbech
Aarhus University, Denmark
210A
Photosynthetic activity and community structure in coastal microbial mats: stableisotope probing combined with magnetic-bead capture of taxon-specific SSU rRNA
1
2
2
Akiko Tomitani* , Henricus T. S. Boschker , Lucas J. Stal
1
Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology
2
(JAMSTEC), Japan, Royal Netherlands Institute for Sea Research (NIOZ), Netherlands
211A
Immigration effects and recovery through a time-series distrubance gradient in a fullscale sequencing batch-membrane bioreactor
David Vuono*, Lee Stanish, Jan Benecke, Jochen Henkel, Junko Munakata-Marr, John Spear,
Jörg Drewes
Colorado School of Mines, United States
212A
Exploring the microbial community structure of iron ochre clogging technical systems
Juanjuan Wang*, Maren Sickinger, Shipeng Lu, Kirsten Küsel
Friedrich-Schiller-Universität Jena, Germany
35
PS06 – Microbial Gradient Communities
Monday 20 August
PS07 – Microbial Interactions and Behavior
076A
Syntrophic communities of clostridia and sulfate reducing deltaproteobacteria
responsible for sulfide production in marine system
Zainab Abdulrahman Beiruti*, Jeanine Geelhoed, Marc Strous
1
Max Planck Institute for Marine Microbiolgy, Germany
077A
The use of indigenous microorganisms as potential biobeneficiation agents for iron ore
minerals
Rasheed Adeleke*, Mphekgo Maila
1
Agricultural Research Council (Institute for Soil Water and Climate), South Africa
078A
Surface active compound from marine microorganisms
1
2
Laith Issa Yassin Al-Araji* , R. H. J. Kadum
1
2
IIUM, Malaysia, UPM, Iraq
079A
A possible self-control in the bacterial community of the Caribbean octocoral Eunicia
succinea by inhibition of communication or antagonistic activities
Catalina Arevalo-Ferro*, Pamela Zorro-Mateus, Annie Cardenas
Universidad Nacional de Colombia, Colombia
080A
Phenotypic heterogeneity in bacterial stress responses
Markus Arnoldini*
ETH Zürich/Eawag, Switzerland
081A
Using functional metagenomics and C. elegans genetics to investigate bacteriaeukaryote antagonistic activities
1
2
3
4
Francesco Ballestriero* , Anahit Penesyan , Malak Daim , Elia Di Schiavi , Paolo
4
3
3
3
Bazzicalupo , Staffan Kjelleberg , Torsten Thomas , Suhelen Egan
1
2
University of New South Wales, Australia, Macquarie University/Department of Chemistry
3
and Biomolecular Sciences, Australia, University of New South Wales/School of
Biotechnology and Biomolecular Sciences and Centre for Marine Bio-Innovation, Australia,
4
National Research Council/Institute of Genetics and Biophysics , Italy
082A
Quorum quenching factors in Delftia acidovorans AR, an autochthonous bacterium
from Reconquista River, Buenos Aires, Argentina
Matias Barrionuevo, Diana Vullo*
Universidad Nacional de General Sarmiento, Argentina
083A
Metabolic coupling and carbon flux regulation in phototroph-heterotroph associations
Alexander Beliaev*
Pacific Northwest National Labopratory, United States
084A
Fluorescence lectin-binding analysis combined with CARD-FISH to visualise
interactions of Bacteroidetes with extracellular polymeric substances (EPS)
1
2
1
1
Christin M. Bennke* , Thomas R. Neu , Bernhard M. Fuchs , Rudolf Amann
1
2
Max-Planck-Institute for Marine Microbiology, Germany, Helmholtz Centre for Environmental
Research - UFZ, Germany
085A
Nitrogen as a driver of cyanobacterial population dynamics and cyanotoxin production
in eutrophic lakes
1
2
1
Lucas Beversdorf* , Todd Miller , Katherine McMahon
1
2
University of Wisconsin-Madison, USA, University of Wisconsin-Milwaukee, USA
36
PS07 – Microbial Interactions and Behavior
Monday 20 August
086A
Fungal endophytes as competitors against Dutch elm disease pathogen
1
2
3
4
Kathrin Blumenstein* , Johanna Witzell , Thomas DeLuca , Benedicte Albrectsen , Juan A.
5
6
Martín , Malin Hultberg
1
2
Swedish University of Agricultural Sciences , Sweden, Swedish University for Agricultural
Sciences / Faculty of Forest Sciences / Southern Swedish Forest Research Center, Sweden,
3
Bangor University / School of Environment, Natural Resources and Geography, United
4
Kingdom, Swedish University of Agricultural Sciences / Umeå Plant Science Centre /
5
6
Department of Plant Physiology, Sweden, Technical University of Madrid, Spain, Swedish
University of Agricultural Sciences / Department of Horticulture, Sweden
087A
Tolerance of S. cerevisiae biofilm to systemic antifungals
1
2
1
Rasmus Bojsen* , Birgitte Regenberg , Anders Folkesson
1
2
Technical University of Denmark, Denmark, University of Copenhagen, Denmark
088A
Exploring the role of bacteria during colonization of oyster mushroom substrate
1
2
2
Renáta Bánfi* , Balázs Vajna , Károly Márialigeti
1
2
Eötvös Loránd University, Hungary, Eötvös Loránd University / Department of
Microbiology, Hungary
089A
Enrichment of manganese oxidizing bacteria coupling with nitrification by down-flow
hanging sponge reactor
1
1
1
2
3
Linh Cao Thi Thuy* , Daisuke Komizo , Kenichi Abe , Masashi Hatamoto , Hiroyuki Imachi ,
1
1
1
Tomonori Kindaichi , Noriatsu Ozaki , Akiyoshi Ohashi
1
2
3
Hiroshima University, Japan, Nagaoka University of Technology, Japan, Japan Agency for
Marine-Earth Science and Technology, Japan
090A
Dynamic of C cellulose biodegradation in batch digesters co-inoculated with rumen
content and anaerobic sludge
Olivier Chapleur*, Ariane Bize, Thibaut Serain, Laurent Mazeas, Théodore Bouchez
Irstea, France
091A
The Gac Regulon of Pseudomonas fluorescens SBW25
Xu Cheng*, Irene de Bruijn, Ester Dekkers, Menno van der Voort, Jos M. Raaijmakers
Wageningen University, Netherlands
092A
Large extracellular proteins of marine bacteria detected by high-throughput proteomics
infer different functions in niche adaptation and community interactions
1
1
2
Joseph A. Christie-Oleza* , David J. Scanlan , Jean Armengaud
1
2
University of Warwick, United Kingdom, CEA Marcoule, France
093A
Unraveling interactions, and directing behaviour, of syntroph-led functional groups in
methanogenic consortia
1
2
1
1
Gavin Collins* , Stephanie Connelly , Cesare Morciano , Vincent O'Flaherty , Gerard
1
3
2
4
2
Fleming , Elise Cartmell , Shin Seung Gu , Catherine A. Biggs , William T. Sloan , Christopher
2
Quince
1
2
3
NUI Galway, Ireland, University of Glasgow, United Kingdom, Cranfield University, United
4
Kingdom, University of Sheffield, United Kingdom
094A
Soil bacterial community complexity versus production of fungistatic volatiles
Wietse de Boer*, Paolina Garbeva, Eiko Kuramae, Gera Hol
Netherlands Institute of Ecology, Netherlands
095A
Functional ecological networks to reveal the succession of microbial interactions
during uranium bioremediation
1
1
1
2
1
Ye Deng* , Zhili He , Ping Zhang , Wei-Min Wu , Jizhong Zhou
1
2
University of Oklahoma, United States, Stanford Univeristy, United States
13
37
PS07 – Microbial Interactions and Behavior
Monday 20 August
096A
Characterisation of a non-ribosomal peptide synthetase cluster linked to anti-diatom
activity in the marine bacterium Pseudoalteromonas tunicata
Suhelen Egan*, Vipra Kumar, Peter Nguyen, John Kalaitzis
The University of New South Wales, Australia
097A
Biofilms as bioindicators of urban contamination: assessing the impacts of metallic
exposure using natural microbial communities
Lise Fechner*, Gourlay-Francé Catherine
Irstea HBAN, France
098A
Biofilms as bioindicators of urban contamination: linking community tolerance to the
presence of microbial metal resistance genes
1
1
1
2
Lise Fechner* , Piriyanthini Peter , Catherine Gourlay-Francé , Thierry Berthe , Fabienne
2
Petit
1
2
Irstea HBAN, France, Université de Rouen, France
099A
Disrupting pathogenesis: chemical interference of quorum sensing by Australian
alcyonacea
1
1
2
3
Marnie Freckelton* , Bruce Bowden , Nete Bernbom , Lone Hoj
1
2
James Cook University, Australia, National Food Institute, Technical University of Denmark,
3
Denmark, Australian Institute of Marine Science, Australia
100A
Identification of biofilm associated traits through proteomic analysis of the marine
macroalgal pathogen Nautella sp. R11 and a LuxR-type quorum sensing regulator
mutant
1
1
1
1
Melissa Gardiner* , Dennis Nowakowski , Neil Fernandes , Staffan Kjelleberg , Torsten
1
2
1
Thomas , Ling Zhong , Suhelen Egan
1
Centre for Marine BioInnovation and School of Biotechnology and Biomolecular Sciences,
2
University of New South Wales, Sydney 2052, Australia, Australia, Bioanalytical Mass
Spectrometry Facility, Mark Wainwright Analytical Centre, The University of New South Wales,
Sydney 2052, Australia, Australia
101A
Behavior and interaction mechanisms of a marine pathogen
1
2
3
1
Melissa Garren* , Orr H. Shapiro , Justin Seymour , Roman Stocker
1
2
Massachusetts Institute of Technology, USA, MIT/ Weizmann Institute of Science, United
3
States, University of Technology Sydney, Australia
102A
Predation-prey evidence on biostimulated diesel-degrading bacterial communities
1
1
2
3
Jean-Francois Ghiglione* , Caroline Sauret , Daniela Bottjer , Agathe Tallarmin , Pascal
1
1
3
3
Conan , Mireille Pujo-Pay , Catherine Guigue , Madeleine Goutx
1
2
3
Laboratoire d'Océanographie Microbienne, France, University of Hawaii, USA, University
Marseille, France
103A
Effects of bioturbation on ammonia oxidising microbial communities in marine
sediments
William Gilbertson*, Martin Solan, James Prosser
University of Aberdeen, United Kingdom
104A
Cross-feeding interactions shape the spatial arrangement of denitrifying microbial
communities
Felix Goldschmidt*, David Johnson
ETH Zurich, Switzerland
105A
Marine experimental life support system for microbial communities
1
1
1
1
1
Newton Gomes* , Francisco Coelho , Rui Rocha , Ana Pires , Bruno Ladeiro , José
1
2
1
1
1
Castanheira , Rodrigo Costa , Adelaide Almeida , Ângela Cunha , Ricardo Calado , Daniel
1
Cleary
1
2
Universidade de Aveiro, Portugal, Centro de Ciências do Mar (CCMAR), Portugal
38
PS07 – Microbial Interactions and Behavior
Monday 20 August
106A
Carbon subsidies affect planktonic niche partitioning and recruitment of bacteria to
marine biofilms
1
2
3
Ed Hall* , Chuck Pepe-Ranney , Jay T. Lennon
1
2
3
U.S. Geological Survey, USA, Colorado School of Mines, USA, Michigan State University,
USA
107A
Vibrio cholerae is a pathogen of chironomids
Malka Halpern*
Univ. of Haifa, Israel
108A
Bacterial diversity associated with mushrooms of the Brazilian Atlantic Rainforest
Joshua Halsey*, Fernando Dini Andreote
USP/ESALQ, Brazil
109A
Interspecies interactions for triggering the hydrogen fermentative metabolism in mixed
cultures: biotic factors can stabilize or improve production
1
1
1
1
Jerome Hamelin* , Yan Rafrafi , Marianne Quéméneur , Eric Latrille , Isabelle Meynial2
1
3
1
Salles , Jean-Philippe Steyer , Marie-Thérèse Guidici-Orticoni , Eric Trably
1
2
3
INRA, France, INSA, France, CNRS, France
110A
Free-living amoebae, a cozy shuttle for bacteria
Yann Hechard*
University of Poitiers, France
111A
Tropodithietic acid producing bacteria - A novel tool for improving food safety of
molluscan shellfish
Cisse Hedegaard Porsby*, Lone Gram
Technical University of Denmark, National Food Institute, Denmark
112A
Bacterial antifouling substances, regulating the dynamic of the epiphytic bacterial
community of a benthic microalgae Nitzschia ovalis arnott
1
1
2
1
Martha Hengst* , Vilma Perez , Claudia Infante , Carlos Riquelme
1
2
Universidad de Antofagasta, Chile, Universidad de antofagasta, Chile
113A
Cell density-dependent anaerobic ammonium oxidation (anammox) activity of
Candidatus 'Brocadia sinica'
Haruna Hiraizumi*, Mamoru Oshiki, Satoshi Okabe
Hokkaido University, Japan
114A
Cooperative dissolved organic carbon metabolism by a linuron degrading bacterial
consortium
Benjamin Horemans*, Johanna Vandermaesen, Erik Smolders, Dirk Springael
Catholic University of Leuven, Belgium
115A
Isolation of a phenanthrene-degrading and acyl homoserine lactone producing soil
bacterium Erythrobacter sp. 303: a candidate strain to study the relationship between
quorum sensing and biodegradation
Yili Huang*
zhejiang univ., China
116A
Investigation of genes and regulatory elements involved in production of novel
antifungal compounds in Burkholderia cenocepacia H111
Christian Jenul*, Aurelien Carlier, Leo Eberl
University of Zurich / Institute of Plant Biology, Switzerland
39
PS07 – Microbial Interactions and Behavior
Monday 20 August
117A
A close-up on bacterial networking in aquatic habitats
1
2
1
Torsten Jeske* , Annelie Wendeberg , Stefan Bertilsson
1
2
Uppsala University, Sweden, Department of Environmental Microbiology Helmholtz Centre
for Environmental Research - UFZ, Germany
118A
Microbiological and morphological characterization of cyanobacterial coniform
structures
1
1
1
1
1
Hope Johnson* , Kristina Reyes , Nicolas Gonzalez , Joshua Stewart , Frank Ospino , Dickie
1
1
1
2
Nguyen , David Cho , Nahal Ghahremani , John Spear
1
2
California State University Fullerton, USA, Colorado School of Mines, USA
119A
Helicobacter pylori antibody value investigation in chronic patients with ELISA
Abdolmajid Khosravani*, Asghar Sharifi, Reza Cheragh Zadeh, Bahman Sharifi, Hamid
Rezam Mohammadi
Yasouj University of Medical Sciences, Iran
120A
Intraspecies competition by antibiotics in Rhodococcus erythropolis strains
Wataru Kitagawa, Yoshiaki Yasutake*, Tomohiro Tamura
National Insutitute of Advanced Science and Technology (AIST), Japan
121A
Grazing impact on the Cyanobacterium Microcystis aeruginosa by the heterotrophic
flagellate Collodictyon Triciliatum in an experimental pond
Yuki Kobayashi*, Yoshikuni Hodoki, Kako Ohbayashi, Noboru Okuda, Shin-ichi Nakano
Kyoto University, Japan
122A
Environmental friendly remediation technology for reuse of coastal dredged materials
1
1
1
1
Sung-Cheol Koh* , Shin-Young Ha , Kyung-Chul Jeong , Kalu Ibe Ekpeghere , Soo-Hyeon
1
2
3
1
Kim , Soo-Gon Kim , Hong-Gi Kim , In-Soo Kim
1
2
3
Korea Maritime University, South Korea, Sindaeyang Co., Ltd., South Korea, BM
Company, South Korea
123A
A metagenome analysis of photobioreactor associated biofilms reveals key elements of
bacterial-algae interactions
1
1
2
3
Ines Krohn-Molt* , Andreas Pommerening-Röser , Malik Alawi , Markus Schillhabel , Dieter
4
1
Hanelt , Wolfgang R. Streit
1
University Hamburg, Biocenter Klein Flottbek, Microbiology and Biotechnology, Germany,
2
3
University Medical Center Hamburg-Eppendorf, Germany, Christian Alberts University to
4
Kiel, Institute of Clinical Molecular Biology, Germany, University Hamburg, Biocenter Klein
Flottbek, Cell Biology and Phycology, Germany
124A
The novel quorum-quenching N-acylhomoserine lactone acylase from Acidovorax sp.
S7 represents beta-lactamase activity
1
2
3
3
1
Hiroyuki Kusada* , Yu Zhang , Nobutada Kimura , Yoichi Kamagata , Satoshi Hanada
1
National Institute of Advanced Industrial Science and Technology (AIST), University of
2
Tsukuba, Japan, National Institute of Advanced Industrial Science and Technology (AIST),
3
Chinese Academy of Science, China, National Institute of Advanced Industrial Science and
Technology (AIST), Japan
125A
Rhodobacteraceae are involved in promoting marine biofilm initiation and development
1
2
Igor Kviatkovski , Dror Minz*
1
2
Hebrew University of Jerusalem, Israel, Institute for Soil, Water and Environmental Sciences
ARO, Volcani Research Center, Israel
126A
Aeromonas prevalence in chironomid egg masses and characterization of Aeromonas
aquariorum secreted factor that degrades the egg masses
Sivan Laviad*, Tamar Shaked, Malka Halpern, Elah Pick
University of Haifa, Israel
40
PS07 – Microbial Interactions and Behavior
Monday 20 August
127A
Reactivity of deep biota following CO2 injection into basalts: the case study of the
Icelandic pilot site
1
1
1
2
Paul Le Campion* , Bénédicte Ménez , Maria Chiara Marinozzi , Sigurður Reynirgíslason ,
2
2
3
Helgi Arnaralfreðsson , Kiflom G. Mesfin Mesfin , Hólmfríður Sigurðardóttir , Edda Sif
3
1
Aradóttir , Emmanuelle Gérard
1
Equipe Géobiosphère actuelle et Primitive, IPGP, UMR 7154 CNRS, Univ. Paris Diderot,
Sorbonne Paris Cité, Paris, France & Centre de Recherches sur le Stockage Géologique du
2
CO2 (IPGP/TOTAL/SCHLUMBERGER/ADEME), France, Institute of Earth Sciences,
3
University of Iceland, Iceland, Reykjavik Energy, Iceland
128A
Xylanases secreted by Penicillium chrysogenum and enzymatic treatment of banana
(Musa sp.) fibers
1
1
1
Luciana de Campos Leite , Ana Paula de Souza Pallu , Maria Beatriz Calderan Rodrigues ,
1
2
1
Ana Carolina Murad Lima , Andréa Cristina Bogas* , Rafael Nora Tannus
1
Tamoios Tecnologia e Consultoria, São Paulo – SP and Genetics Department, ESALQ2
USP, Brazil, University of São Paulo, Genetics Department, ESALQ-USP, Brazil
129A
Interaction between Cry1Ia and Vip3Aa proteins from Bacillus thuringiensis towards
larvae of Spodoptera spp (Lepidoptera)
Manoel V F Lemos*, Vivian B Bergamasco, Deise R P Mendes, Odair A Fernandes, Janete A
Desidério
UNESP/Campus de Jaboticabal, Brazil
130A
Self-adaption of methane-producing communities to acetate-pH-inducing acid crisis by
shifting pathways and population interaction
Fan Lu, Liping Hao*, Pinjing He, Jianglin Cao, Liming Shao
Tongji University / College of Environmental Science & Engineering, China
131A
Cheater-producer interactions in protease-producing populations of Pseudomonas
fluorescens
Ying (Lucy) Lu*, Steven D. Allison
University of California, Irvine, USA
132A
Using plant ecological models to provide a framework for understanding bacterial
predation defence against protozoan grazing
1
2
3
1
Carla Lutz* , Staffan Kjelleberg , Peter D. Steinberg , Diane McDougald
1
The Centre for Marine Bio-Innovation and School of Biotechnology and Biomolecular
2
Science, University of New South Wales, Sydney 2052, Australia, Singapore Centre on Life
Science Engineering, Nanyang Technological University, Singapore 637551, Australia,
3
School of Biological, Earth and Environmental Science, University of New South Wales,
Sydney, and Sydney Institute of Marine Science, Chowder Bay Road, Mosman 2088, Australia
133A
Study of the competence of a PAH-degrading strain to establish and promote the
phenanthrene degradation by a native Phenanthrene-degrading consortium
1
1
2
1
Marianela Macchi , Sabrina Festa , Irma Morelli , Bibiana Coppotelli*
1
2
CINDEFI (UNLP; CCT-La Plata, CONICET), Argentina, CINDEFI (UNLP; CCT-La Plata,
CONICET) and Comisión de Investigaciones Científicas de la Provincia de Buenos
Aires, Argentina
134A
When it makes sense to socialize whilst being on the move: a small EAL-domain
containing protein, encoded on natural biofilm-promoting plasmids, triggers motility
Jonas Stenløkke Madsen*, Lise Riber, Mette Burmølle, Lars Hestbjerg Hansen, Søren
Johannes Sørensen
Department of Biology, Section for Microbiology, University of Copenhagen, Denmark
135A
Does spatial structure select for enhanced metabolite secretion between interacting cell
types?
Marie Marchal*, David Johnson, Martin Ackermann
EAWAG / Ethz, Switzerland
41
PS07 – Microbial Interactions and Behavior
Monday 20 August
136A
Role of the Type VI secretion system of Pseudomonas fluorescens Pf29Arp in biofilm
process
Muriel Marchi*, Marie Hervé, Anne-Yvonne Guillerm-Erckelboudt, Kévin Gazengel, Morgane
Boutin, Lionel Lebreton, Stéphanie Daval, Alain Sarniguet
INRA - UMR 1349 IGEPP, France
137A
Living together or alone? Tracking relations among bacterial, archaeal and protozoa
communities in activated sludge systems
1
2
2
Marta Martins Neto* , Sandra Chaves , Ana Nicolau
1
2
University of Minho - IBB/CEB, Portugal, University of Lisbon/BioFIG, Portugal
138A
Assessing interactions between human gut enterotype communities in an in vitro
model of the human distal colon
Julie McDonald*, Kathleen Schroeter, Emma Allen-Vercoe
University of Guelph, Canada
139A
The influence of natural bacteria competitors on the cost of sex in Saccharomyces
paradoxus
Eric Miller*, Duncan Greig
Max Planck Institute for Evolutionary Biology, Germany
140A
Multi-species biofilm communities: from close proximity to enhanced cross-genus
sexuality
Pauline Modrie*, Olivier Henriet, Thomas Vanzieleghem, Jacques Mahillon
Université catholique de Louvain, Belgium
141A
Exogenous protease promoted cell aggregation of a filamentous bacterium
Chloroflexus aggregans
Sho Morohoshi*, Shin Haruta, Katsumi Matsuura
Tokyo Metropolitan University, Japan
142A
Analysis of the dynamic of N-acyl-homoserine lactone production in continuous
cultures of Pseudomonas putida IsoF by chemical analysis and immunoassay
1
2
2
1
Marlene Muehlbauer , Maria Barbarossa , Christina Kuttler , Juliano Fonseca , Katharina
1
1
1
1
Buddrus-Schiemann , Petra Kraemer , Burkhard Hense* , Philippe Schmitt-Kopplin , Anton
1
1
Hartmann , Martin Rieger
1
2
Helmholtz Zentrum München, Germany, Technical University Munich, Germany
143A
Environment shift the interaction between Escherichia coli and Pseudomonas
aeruginosa
Kaori Ono*, Hiromu Oura, Masanori Toyofuku, Masakaze Hamada, Toshiaki NakajimaKambe, Hiroo Uchiyama, Nobuhiko Nomura
University of Tsukuba, Japan
144A
Cellulolytic screening of mesophilic and thermophilic fungi from the composting
process of São Paulo Zoo – Brazil
1
1
Suzan Pantaroto de Vasconcellos* , Leonardo André dos Santos , Geomarcia Feitosa da
1
1
1
1
Cruz Ramos , Vitor Batista Ferrari , Leonardo Jun Otuyama , Bruna Nunes Buscariollo ,
1
1
2
Rafael Costa Santos Rocha , Patricia Locosque Ramos , João Batista Cruz , Luiz Juliano
1
Neto
1
2
Federal University of São Paulo (UNIFESP), Brazil, São Paulo Zoo Foundation Park, Brazil
145A
Accumulation of Cs by different isolates of microorganisms, collected from
radionuclide contaminated soils
1
2
3
1
Olena Pareniuk* , Moshynets Olena , Levchuk Svyatoslav , Gudkov Igor
1
2
National University of Life and Environmental Sciences of Ukraine, Ukraine, Institute of
3
Molecular Biology and Genetics of NAS of Ukraine, Ukraine, Ukrainian Institute of Agricultural
Radiology, Ukraine
137
42
PS07 – Microbial Interactions and Behavior
Monday 20 August
146A
Indigenous microbial community dynamics during reductive dechlorination of
groundwater at a chloroethene contaminated site in Victoria, Australia
1
1
2
2
Sayali Patil* , Dr Eric Adetutu , Dr Arturo Aburto , Prof Andrew Ball
1
2
Flinders University of South Australia, Australia, Royal Melbourne Institute of technology,
Australia
147A
Seasonal and spatial changes in three taxon microbial communities present at different
vegetation types on Brazilian Cerrado soil
Alinne Pereira de Castro, Maria Regina Sartori Silva*, Ricardo Kruger
University of Brasilia, Brazil
148A
Differential characterization of bacterial and organic fractions of biofilms fouling the
reverse osmosis membranes
1
1
2
Jean-Jacques Pernelle* , Anne Goubet , Nicolas Boudaud
1
2
Irstea, France, Veolia Environnement Recherche et Innovation, France
149A
Identification of quorum sensing genes in the halophilic archaea; Halococcus
hamelinensis
Eva Preisner*, R. Sean Norman
University of South Carolina, United States
150A
Phaeobacter gallaeciensis cell-to-cell signalling does not influence its antagonism of a
pathogenic vibrio sp. in cultures of microalgae
Maria Prol-Garcia, Paul D'Alvise*, Lone Gram
Technical University of Denmark, Denmark
151A
Abundance and diversity of copper resistance genes cusA and copA in microbial
communities regarding copper impact on marine Chilean sediments
Laurent Quillet*, Besaury Ludovic, Bodilis Josselin
UMR CNRS 6143 Université de Rouen, France
152A
Influence of surface properties and ionic strength on eDNA mediated adhesion of
Staphylococcus xylosus to abiotic surface
Viduthalai R. Regina*, Lokanathan R. Arcot, Jakub Modrzynski, Rikke Meyer
Aarhus University, Denmark
153A
Differential processing of Listeria monocytogenes and Salmonella enterica serovar
Typhimurium by a free-living protozoan (Colpoda sp.)
Rethish Raghu Nadhanan*, Connor Thomas
The University of Adelaide, Australia
154A
Production of Vesicles Containing Live Listeria monocytogenes by the Ciliate Colpoda
sp.
Rethish Raghu Nadhanan*, Connor Thomas
The University of Adelaide, Australia
155A
Phagosome-lysosome fusion, vacuolar acidification and proteases are necessary for
the inactivation of Listeria monocytogenes within the ciliated protozoan Colpoda sp.
Rethish Raghu Nadhanan*, Connor Thomas
The University of Adelaide, Australia
156A
Delineating the differences in microbiological and molecular responses of bacteria
exposed to varying ionizing radiation dose rates and source energies
Anne-Sophie Rambo*, Palmy Jesudhasan, Suresh Pillai
Texas A&M University, USA
43
PS07 – Microbial Interactions and Behavior
Monday 20 August
157A
Potential Role of GGDEF Domain-Containing Proteins in the Red Algal-Associated
Marine Bacterium, Nautella italica sp R11
1
2
2
2
2
Raymond Regalia* , Nicolas Barraud , Tilmann Harder , Torsten Thomas , Staffan Kjelleberg
1
2
Center for Marine Bio-Innovation, Australia, Center for Marine Bio-Innovation, School of
Biotechnology and Biomolecular Sciences, The University of New South Wales, Australia
158A
Cooperation in multispecies biofilms results in enhanced levels of biofilm formation
and is prevalent within natural soil bacteria
Dawei Ren*, Jonas Madsen, Søren Sørensen, Mette Burmølle
University of Cophenhagen, Department of Biology, Denmark
159A
Love hurts: bacterial handling of copper by the cus system
Christopher Rensing*
University of Copenhagen, Denmark
160A
The impact of the conjugative IncP-1 plasmid pKJK5 on multispecies biofilm formation
is highly dependent on the identity of the plasmid host
Henriette Lyng Røder*, Lars Hestbjerg Hansen, Søren Johannes Sørensen, Mette Burmølle
University of Copenhagen, Department of biology, Denmark
161A
Individuality in bacteria under grazing influence
Anja Scherwass*, Johann Cesarz, Andre Schieffer, Hartmut Arndt
University of Cologne, Germany
162A
Occurrence of Listeria in surface waters and its growth properties under environmental
and defined nutritional conditions
Rudolf Schneebeli*, Andreas Elmer, Thomas Egli
Eawag, Switzerland
163A
Production of fungal and bacterial growth modulating secondary metabolites is
widespread among mycorrhiza-associated streptomycetes
1
1
1
1
2
Silvia Schrey* , Erkenbrack Erik , Elisabeth Frueh , Svenja Fengler , Kerstin Hommel , Nadine
3
3
1
3
3
Horlacher , Dirk Schulz , Margret Ecke , Andreas Kulik , Hans-Peter Fiedler , Ruediger
1
2
Hampp , Mika Tarkka
1
2
University of Tuebingen, IMIT-Physiological Ecology of Plants, Germany, UFZ-Helmholtz3
Centre for Environmental Research, Department of Soil Ecology, Germany, University of
Tuebingen, IMIT-Microbiology/Antibiotics, Germany
164A
Chemotaxis by aquatic microbes: behavioural links to the environment
1
1
1
2
3
Justin Seymour* , Thomas Jeffries , Jessica Tout , Roman Stocker , Gene Tyson , Paul
3
Dennis
1
2
University of Technology, Sydney, Australia, Massachusetts Institute of Technology, United
3
States, University of Queensland, Australia
165A
The existence of Roseobacter clade bacteria in concert with phytoplankton
Nannochloropsis oculata enhances the inhibition effect against fish pathogen Vibrio
anguillarum
Noor Emilia Sharifah*, Mitsuru Eguchi
Kinki University, Japan
166A
Systemic Staphylococcus aureus infection mediated by Candida albicans hyphal
invasion in oral co-infection
Mark Shirtliff*
University of Maryland, Baltimore, United States
167A
Social life of an opportunistic bacterial fish pathogen
Lotta-Riina Sundberg*, Tarmo Ketola, Elina Laanto, Jaana Bamford
University of Jyvaskyla, Finland
44
PS07 – Microbial Interactions and Behavior
Monday 20 August
168A
Effect of chemical signaling on the swimming behavior of Vibrio fischeri
Srinivasa Sandeep Suravajhala*, Prabhu Nott
Indian Institute of Science, India
169A
Variations of microbial community structures during seawater desalination process by
reverse osmosis under different conditions
1
1
1
2
2
Yui Takahashi* , Hiroshi X. Chiura , Minoru Ijichi , Yohito Ito , Shigehisa Hanada , Kazuhiro
1
Kogure
1
2
The University of Tokyo, Atomosphere and Ocean Research Institute, Japan, Toray
Industries, Inc., Global Environmental Research Laboratories, Japan
170A
Reduction of folate synthesis represses biofilm formation by decreasing curli synthesis
in Escherichia coli
Yosuke Tashiro*, Satoshi Okabe
Hokkaido University, Japan
171A
Quorum sensing controls population heterogeneity in the marine bacterium
dinoroseobacter shibae
1
1
1
2
1
Jürgen Tomasch* , Diana Patzelt , Hui Wang , Ina Buchholz , Lothar Gröbe , Heinrich
1
1
Lünsdorf , Irene Wagner-Döbler
1
2
Helmholtz-Centre for Infection Research, Germany, Labor L+S AG, Germany
172A
Membrane vesicle production under anaerobic conditions in Pseudomonas aeruginosa
Masanori Toyofuku*, Hiroo Uchiyama, Nobuhiko Nomura
University of Tsukuba, Japan
173A
Bacterial cis-2-unsaturated fatty acids found in the cystic fibrosis airway play a role in
bacterial interspecies signalling during polymicrobial infection of the CF lung
1
2
2
1
1
Kate Twomey* , Oisin J. O' Connell , Mike J. Harrison , Yvonne McCarthy , J. Maxwell Dow ,
2
1
Barry J. Plant , Robert P. Ryan
1
2
University College Cork, Ireland, Cork Adult Cystic Fibrosis Centre, Dept of. Respiratory
Medicine, Cork University Hospital, University College Cork, Ireland
174A
Effects of natural microbial communities on the corrosion rate of steel buried in soil
Kayley Usher*, Anna Kaksonen, Donavan Marney
CSIRO, Australia
175A
Genome mining of the rhizosphere bacterium Pseudomonas sp. SH-C52
1
2
3
4
Menno van der Voort* , Yvonne Schmidt , Jeramie Watrous , Rodrigo Mendes , Harald
2
3
1
Gross , Pieter C. Dorrestein , Jos M. Raaijmakers
1
2
3
Wageningen University, Netherlands, University of Bonn, Germany, University of California
4
at San Diego, USA, Embrapa Environment, Brazil
176A
Foul play: the role of the microbial community in bore fouling
1
1
2
Elizabeth Watkin* , Christopher Bryan , Luke Zappia
1
2
Curtin University, Australia, Water Corporation, Australia
177A
Characterizing co-contaminant effects and cross-inhibition in dechlorinating
enrichment cultures
Kai Wei*, Elizabeth Edwards
University of Toronto, Canada
45
PS07 – Microbial Interactions and Behavior
Monday 20 August
178A
Signaling factor-induced metabolic exchange in interactions of Actinobacteria analyzed
by novel imaging mass spectrometry methods
1
2
3
4
3
Roland Wenter* , Eric Helfrich , Jeramie Watrous , Jörn Piel , Pieter Dorrestein , Bradley
2
Moore
1
2
Scripps Institution of Oceanography, University of California San Diego, USA, University of
California San Diego, Center for Marine Biotechnology and Biomedicine, Scripps Institution of
3
Oceanography, USA, University of California San Diego, Department of Chemistry and
4
Biochemistry, USA, University of Bonn, Kekulé Institute of Organic Chemistry and
Biochemistry, Germany
179A
Effects of electron acceptors on microbial reductive debromination of Polybrominated
diphenyl ethers
1
1
1
1
1
1
Meiying Xu* , Yonggang Yang , Xingjuan Chen , Guilan Chen , Guoping Sun , Jun Guo , Jian
2
3
3
4
Xu , Jizhong Zhou , Zhili He , Bixian Mai
1
2
Guangdong Institute of Microbiology, China, Qingdao Institute of Bioenergy and Bioprocess
3
Technology, China, Institute for Environmental Genomics, University of Oklahoma, USA,
4
Guangzhou Institute of Geochemistry, China
PS08 – Microbial Symbioses
513A
Microbial community typing of deep sea corals from the Red Sea
Till Bayer*, Cornelia M Roder, Christian R Voolstra
King Abdullah University of Science and Technology, Saudi Arabia
514A
Hidden bacterial diversity support the lichen symbiosis
1
1
2
3
Gabriele Berg* , Massimiliano Cardinale , Katharina Riedel , Martin Grube
1
2
3
Graz University of Technology, Austria, University of Greifswald, Germany, KFU
Graz, Austria
515A
Synthetic escherichia coli consortia engineered for syntrophy demonstrate enhanced
biomass productivity
1
2
1
Hans Bernstein* , Steven Paulson , Ross Carlson
1
2
Montana State University; Center for Biofilm Engineering, USA, Montana State
University, USA
516A
Nodulation and nitrogen-fixation in South African Burkholderia have unique
evolutionary origins
1
1
2
1
Chrizelle Beukes , Stephanus Venter* , Ian Law , Emma Steenkamp
1
Department of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology
2
Institute (FABI), University of Pretoria, South Africa, Agricultural Research Council Plant
Protection Research Institute, South Africa
517A
The genus Pseudovibrio contains metabolically versatile and symbiotically interacting
bacteria
1
1
2
1
1
Vladimir Bondarev* , Michael Richter , Jörn Piel , Stefano Romano , Anne Schwedt , Heide
1
Schulz-Vogt
1
2
Max Planck Institute for Marine Microbiology, Germany, University of Bonn, Kekulé-Institute
of Organic Chemistry and Biochemistry, Germany
518A
The eroded genome of a Psychotria leaf symbiont: hypotheses about lifestyle and
interactions with its host
Aurelien Carlier*, Leo Eberl
University of Zürich, Switzerland
46
PS08 – Microbial Symbioses
Monday 20 August
519A
Intestinal bacterial community of Black Tiger shrimp Penaeus monodon: diversity
among different farms and distribution along the digestive tract
1
1
2
Sage Chaiyapechara* , Wanilada Rungrassamee , Phayungsak Mongkol , Amornpan
1
1
1
Klanchui , Nitsara Karoonthaisiri , Pikul Jiravanichpaisal
1
2
National Center for Genetic Engineering and Biotechnology, Thailand, Chulalongkorn
University, Thailand
520A
Microbial symbiosis yielding the emission of the greenhouse gases nitrous oxide and
methane by earthworms: functional links to taxa
1
1
1
2
3
Peter Depkat-Jakob* , Sindy Hunger , Kristin Schulz , George Brown , Siu Tsai , Harold
1
Drake
1
2
3
University of Bayreuth, Germany, Embrapa Florestas, Brazil, Center for Nuclear Energy in
Agriculture, Brazil
521A
A role for small RNAs in human-microbe molecular cross talk?
1
1
2
2
1
Mahesh S Desai* , Jakub Porzuczek , Kai Wang , David Galas , Paul Wilmes
1
2
Luxembourg Centre for Systems Biomedicine, Luxembourg, Institute for Systems Biology,
USA
522A
Illuminating the Enigmatic: Bacterial symbionts of the marine worm Xenoturbella bocki
1
1
1
1
2
Daryl Domman* , Thomas Wienmaier , Dmitrij Turaev , Thomas Rattei , Albert Poustka ,
1
Matthias Horn
1
2
University of Vienna, Austria, Max-Planck Institute for Molecular Genetics, Germany
523A
Dynamics of the gut-microbial communities in arctic ground squirrels: effects of
development and hiberrnation
Khrys Duddleston*, Tim Stevenson, C. Loren Buck
University of Alaska Anchorage, USA
524A
Symbionts in aquatic ciliates are involved in nitrogen cycling
1
1
2
Claudia Dziallas* , Lasse Riemann , Hans-Peter Grossart
1
2
University of Copenhagen, Denmark, Leibniz-Institute of Freshwater Ecology and Inland
Fisheries, Germany
525A
Comparative genomics of Wolbachia and the bacterial species concept
1
1
1
2
1
Kirsten Ellegaard* , Lisa Klasson , Kristina Näslund , Kostas Bourtzis , Siv Andersson
1
2
Uppsala University, Sweden, University of Western Greece, Greece
526A
Metagenomic and single-cell genomic analysis of the gut microbiota of honey bees
1
1
2
1
Philipp Engel* , Vincent G. Martinson , Ramunas Stepanauskas , Nancy A. Moran
1
2
Yale University, USA, Bigelow Laboratory for Ocean Sciences, USA
527A
Cellulolytic microbes isolated from the earthworm gut
Katsuhiko Fujii*, Kana Ikeda, Seo Yoshida
Yamaguchi University, Japan
528A
Characterization of the bacterial community inhabiting the digestive tube of the sea
urchin Paracentrotus lividus
Isabelle F. George*, Benoît Bergk Pinto, Mathieu Bauwens, Chantal De Ridder
Universite Libre de Bruxelles, Belgium
529A
First expressed genes inventory of the endomycorrhizal fungus Gigaspora margarita as
revealed by RNA-seq transcriptomeanalysis
1
2
1
3
1
Stefano Ghignone* , Alessandra Salvioli , Luisa Lanfranco , Nicolas Corradi , Paola Bonfante
1
2
Istituto per la Protezione delle Piante, UOS Torino, C.N.R., Italy, Dipartimento di Scienze
3
della Vita e Biologia dei Sistemi, Università degli Studi di Torino, Italy, Canadian Institute for
Advanced Research, Department of Biology, University of Ottawa, Canada
47
PS08 – Microbial Symbioses
Monday 20 August
530A
Influence of pH and maize genotypes contrasting for phosphorus efficiency on
arbuscular mycorrhizal fungi communities in a Cerrado soil in Brazil
Eliane Gomes*, Francisco de Souza, Christiane Oliveira, Ubiraci Lana, Roberto Noda, Ivanildo
Marriel
Embrapa Maize and Sorghum, Brazil
531A
Endogenic bacteria facilitate chironomids survival in polluted habitats
Malka Halpern*, Yigal Senderovich
University of Haifa, Israel
532A
Characterization of the bacterial community structure in Cecropia-obligate Azteca ants
using 454 pyrosequencing
Alissa Hanshew*, Cameron Currie
University of Wisconsin-Madison, United States
533A
Bacterial community structures differ in spatially close Irciniidae sponge species
1
1
2
3
Cristiane C.P. Hardoim* , Ana I. S. Esteves , Francisco R. Pires , Jorge M. S. Gonçalves ,
4
5
1
Cymon Cox , Joana B.T. Xavier , Rodrigo Costa
1
Microbial Ecology and Evolution Research Group, Centre of Marine Sciences, University of
2
Algrave, Portugal, Research Centre in Biodiversity and Genetic Resources, Biology
3
Department, University of the Azores, Portugal, Fisheries, Biodiversity and Conservation
4
Research Group, Centre of Marine Sciences, University of Algarve, Portugal, Plant
Systematics and Bioinformatics, Centre of Marine Sciences (CCMar), University of
5
Algarve, Portugal, Research Centre in Biodiversity and Genetic Resources, Biology
Department, University of the Azores and Centre for Advanced Studies of Blanes, Spain
534A
Pyrosequencing elucidates degrees of specificity, effects of sample handling and the
extent of cultivation bias for bacterial communities in marine sponges of the family
Irciniidae
1
1
2
3
Cristiane C.P. Hardoim* , Ana I. S. Esteves , Cymon Cox , Joana B.T. Xavier , Rodrigo
1
Costa
1
Microbial Ecology and Evolution Research Group, Centre of Marine Sciences, University of
2
Algarve, Portugal, Plant Systematics and Bioinformatics, Centre of Marine Sciences,
3
University of Algarve, Portugal, Research Centre in Biodiversity and Genetic Resources,
Biology Department, University of the Azores, Portugal and Centre for Advanced Studies of
Blanes, Spain., Portugal
535A
Bacterial landscapes in keratose sponges: insights gained by in-tube fluorescent in situ
hybridization
1
1
2
2
Cristiane C.P. Hardoim* , Rodrigo Costa , Gabriele Berg , Massimiliano Cardinale
1
Microbial Ecology and Evolution Research Group, Centre of Marine Sciences, University of
2
Algarve, Portugal, Institute of Environmental Biotechnology, Graz University of Technology,
Austria
536A
Frankia in-planta sporulation: a unique model of endophyte dormancy inside host cells
in the context of symbiotic relationships
1
1
1
1
1
Aude Herrera-Belaroussi* , A. Pozzi , H.h. Bautista-Guerrero , I. Nouioui , L. Cotin , R.
1
1
2
1
Pépin , P. Fournier , F. Menu , M. Fernandez
1
2
Université Lyon 1, CNRS, UMR 5557, Ecologie Microbienne, France, Université Lyon 1,
CNRS, UMR 5558, Laboratoire de Biométrie et de Biologie Evolutive, France
537A
Establishment of artificial symbiotic system between Escherichia coli and an insect
Yoshiko Ishii*, Takahiro Hosokawa, Yoshitomo Kikuchi, Takema Fukatsu
National Institute of Advanced Industrial Science and Technology, Japan
48
PS08 – Microbial Symbioses
Monday 20 August
538A
Microbial landscapes on the external tissue surfaces of three reef-building corals,
Porites compressa, Montipora capitata and Pocillopora damicornis, as revealed by
scanning electron microscopy
1
2
Ian Johnston* , Forest Rohwer
1
2
Bethel University, United States, San Diego State University, United States
539A
Analysis of six poribacterial single-cell genomes reflects key features of spongemicrobe interactions
1
2
3
2
Janine Kamke* , Tanja Woyke , Alexander Sczyrba , Konstantinos Mavromatis , Natalia
2
4
Ivanova , Ute Hentschel
1
2
3
University of Wuerzburg, Germany, DOE Joint Genome Institute, USA, University of
4
Bielefeld, Center for Biotechnology, Germany, University of Wuerzburg, Julius von Sachs
Institute for Biological Sciences, Germany
540A
Bacterial communities in the guts of honey bees Apis cerana and Apis mellifera in
Korea
Byung-Yong Kim*, Jae-Hyung Ahn, Jaekyeong Song, Hang-Yeon Weon
National Academy of Agricultural Science, South Korea
541A
Marine epibiotic bacteria isolated from the surface of different jellyfish species
Maja Kos*, Valentina Turk
National institute of Biology, Marine Biology Station Piran, Slovenia
542A
Isolation, characterization, and genomic analysis of the symbiotic gut bacteria of
honeybees and bumblebees
Waldan Kwong*, Nancy Moran
Yale University, USA
543A
Chlamydia as cure: Protochlamydia amoebophila increases amoebal survival in the
face of Legionella pneumophila infection
1
1
1
2
1
Lena König* , Frederik Schulz , David M. Berry , Michele S. Swanson , Matthias Horn
1
2
University of Vienna, Austria, University of Michigan Medical School, USA
544A
Diversity of gorgonian-associated bacterial communities in Northwestern
Mediterranean Sea
1
1
2
1
Marie La Riviere* , Marie Roumagnac , Joaquim Garrabou , Marc Bally
1
2
Mediterranean Insitute of Oceanography (UMR 7294 MIO), France, Institut de Ciències de la
Mar (ICM-CSIC),, Spain
545A
Biodiversity of prokaryotic communities associated with the ectoderm of Ectopleura
crocea (Cnidaria, Hydrozoa)
1
2
2
2
Gian Marco Luna* , Cristina Gioia Di Camillo , Marzia Bo , Giuseppe Giordano , Cinzia
2
3
Corinaldesi , Giorgio Bavestrello
1
2
National Research Council - Institute of Marine Sciences (ISMAR-CNR), Italy, DiSVA,
3
Polytechnic University of Marche, Italy, DIPTERIS, Università di Genova, Italy
546A
The role of oil-degraders in survival of corals in oil contaminated environments
Huda Mahmoud*, Lulwa Al-Dahash
Kuwait University, Kuwait
547A
Rhizosphere and gut common microbial ecology
Esperanza Martinez-Romero*, Luis Servin, Tabita Ramírez-Puebla, Luis Bolaños, Arturo Vera,
Julio Martinez-Romero, Marco A. Rogel, Mónica Rosenblueth
Genomics Science Center, UNAM, Mexico
49
PS08 – Microbial Symbioses
Monday 20 August
548A
Lignocellulose digestion in the hindgut of higher termites: Specific association of
Spirochaetes, Fibrobacteres and TG3 with the fiber fraction
1
1
2
1
Aram Mikaelyan* , Jürgen Strassert , Gaku Tokuda , Andreas Brune
1
2
Max Planck Institute for Terrestrial Microbiology, Germany, University of the Ryukyus, Japan
549A
Transfer of atmospheric fixed nitrogen from cyanobacteria to feather moss - an
investigation using SIMS technique
Nurun Nahar*, Ulla Rasmussen
Stockholm University/Department of Botany, Sweden
550A
Whole genome sequence of the defensive beewolf symbiont 'Candidatus Streptomyces
philanthi' reveals piericidin biosynthesis cluster
1
1
1
2
2
3
Taras Nechitaylo , Tobias Engle* , Sabrina Köhler , Robert Weiss , Diane Dunn , Colin Dale ,
1
Martin Kaltenpoth
1
Research Group Insect Symbiosis, Max Planck Institute for Chemical Ecology, Germany,
2
3
Department of Human Genetics, University of Utah, USA, Department of Biology, University
of Utah, USA
551A
Illumina RNASeq analysis of the hindgut microbiome in the termite Reticulitermes
flavipes
Michael Nelson*, Pascal LaPierre, Charles Bridges, Daniel Gage, Joerg Graf
University of Connecticut, United States
552A
Diversity and distribution of methanogens in higher termites
James Nonoh*, Kristina Paul, Andreas Brune
MPI for Terrestrial microbiology, Germany
553A
Bacterial flagellar motility plays a pivotal role in an insect-microbe gut symbiosis
1
2
3
2
Tsubasa Ohbayashi* , Wataru Kitagawa , Takema Fukatsu , Yoshitomo Kikuchi
1
2
Hokkaido University, Japan, Hokkaido University and National Institute of Advanced
3
Industrial Science and Technology, Japan, National Institute of Advanced Industrial Science
and Technology, Japan
554A
Enrichment of a novel lineage of methanogenic archaea distantly related to the
Thermoplasmatales from the intestinal tract of termites
Kristina Paul*, James Nonoh, Andreas Brune
Max Planck Institute for terrestrial Microbiology, Germany
555A
A quest for microbial indicators of the Tuber melanosporum production using an
environmental genomics approach
1
1
1
1
1
Alessandra Pontiroli* , Hervé Sanguin , Marc Ducousso , Antoine Galiana , Christine Leroux ,
2
3
4
1
4
Odile Domergue , Daniel Mousain , Robin Duponnois , Yves Prin , Ezékiel Baudoin
1
2
3
LSTM-CIRAD, France, LSTM-INRA, France, Société d’Horticulture et d’Histoire Naturelle de
4
l’Hérault/INRA, France, LSTM-IRD, France
556A
Description of a new AMF strain from Ecuador, a potential epitype for Rhizophagus
invermaius (Glomus invermaium)
1
2
2
2
Valentine Potten* , Carolina Senés Guerrero , Gloria Torres Cortés , Arthur Schüßler ,
3
1
1
Christopher Walker , Stephan Declerck , Sylvie Cranenbrouck
1
2
Université Catholique de Louvain-la-Neuve, Belgium, Ludwig Maximilian University of
3
Munich, Germany, n/a, United Kingdom
557A
Identification of antimicrobial compounds produced by coral-associated bacteria
1
2
2
3
2
Jean-Baptiste Raina* , Dianne Tapiolas , Cherie Motti , Bette Willis , David Bourne
1
2
James Cook University/Australian Institute of Marine Science, Australia, Australian Institute
3
of Marine Science, Australia, James Cook University, Australia
50
PS08 – Microbial Symbioses
Monday 20 August
558A
Effect of thermal stress on coral-associated bacterial communities
1
2
3
4
4
Jean-Baptiste Raina* , Adrian Lutz , Francois Seneca , Dianne Tapiolas , Cherie Motti , Bette
2
4
Willis , David Bourne
1
2
James Cook University/Australian Institute of Marine Science, Australia, James Cook
3
4
University, Australia, Stanford University, United States, Australian Institute of Marine
Science, Australia
559A
Understanding host-symbiont associations in relation to the environment in closely
related sponge species
1
1
1
2
Julie Reveillaud* , Loïs Maignien , Mitchell L. Sogin , Ann Vanreusel
1
2
Josephine Bay Paul Center, Marine Biological Laboratory, USA, Marine Biology Section,
Ghent University, Belgium
560A
Bacterial community structure in the Nod-deficient intestinal environment
Susan Robertson*, Heidi Mascarenhas, Jun Yu Zhou, Dana Philpott
University of Toronto, Canada
561A
Germ free models (zebrafish and rainbow trout) reveal difference in the responses of
the innate immune system to bacteria from salmonid microbiota
2
Jaime Romero*, Paola Navarrete, Rafael Opazo , Maria Jimenez
Universidad de Chile, INTA, Chile
562A
Genome evolution in the horizontally-transmitted chemoautotrophic symbiont of a
deep-sea Bathymodiolius mussel
1
1
1
1
2
Lizbeth Sayavedra* , Jillian M. Petersen , Silke Wetzel , Michael Richter , Eric Pelletier ,
2
1
Valerie Barbe , Nicole Dubilier
1
2
Max Planck Institute for Marine Microbiology, Germany, Commissariat à l’Energie
Atomique/Genoscope, France
563A
Phylogeny and physiology of tunicate symbionts affiliated with the
gammaproteobacterial Endozoicomonas-clade
1
1
2
3
2
Lars Schreiber* , Kasper U. Kjeldsen , Jeppe Jensen , Matthias Obst , Peter Funch , Andreas
2
Schramm
1
Aarhus University / Department of Bioscience, Center for Geomicrobiology, Denmark,
2
3
Aarhus University / Department of Bioscience, Denmark, Göteborg University / Department
of Biological and Environmental Sciences, Sweden
564A
Steps towards establishing probiotics in the distal colon: characterizing the primary
colonizers of in vitro colonic biofilms
Kathleen Schroeter*, Julie McDonald, Cezar Khursigara, Emma Allen-Vercoe
University of Guelph, Canada
565A
An Enigmatic Bacterial Symbiont Residing in the Nucleus of Amoebae
1
2
1
Frederik Schulz* , Rok Kostanjšek , Matthias Horn
1
2
University of Vienna, Department of Microbial Ecology, Austria, Univerza v Ljubljani, Oddelek
za biologijo, Slovenia
566A
Arbuscular mycorrhizal Fungi associated with Saffron (Crocus sativus) in Iran
1
2
2
2
Ebrahim Sedaghati* , Pejman Khodaygan , Mina Kolahnamadi , Samare Aminizadeh
1
Department of Plant Protection, Faculty of Agriculture, Vali-e-Asr University of
2
Rafsanjan, Iran, Vali-e-Asr University of Rafsanjan, Iran
567A
Coral mucus-associated Pseudoalteromonas demonstrating antibacterial activity
Maya Shnit-Orland*, Alex Sivan, Ariel Kushmaro
Ben Gurion University of the Negev, Israel
51
PS08 – Microbial Symbioses
Monday 20 August
568A
The non-phototrophic microbiota of halophilic seashore lichens
1
2
1
Margrét Auður Sigurbjörnsdóttir* , Starri Heiðmarsson , Anna Rut Jónsdóttir , Oddur
1
Vilhelmsson
1
2
University of Akureyri, Iceland, The Icelandic Institute of Natural History, Iceland
569A
Freshwater cyanobacterial bloom is connected to the grazing food chain via fungal
parasitism
Télesphore Sime-Ngando*, Mélanie Gerphagnon, Delphine LATOUR, Jonathan Colombet
UMR CNRS 6023 Université Blaise Pascal, 63171 Aubière, France
570A
Factors affecting microbial community structure in Mediterranean dictyoceratid sponge
species; host phylogeny versus biogeography
1
1
1
1
Katerina Skaraki* , Thanos Dailianis , Panagiotis Kasapidis , Elena Sarropoulou , Jacques
1
2
1
1
Lagnel , Adriani Pantazidou , Antonios Magoulas , Georgios Kotoulas
1
Hellenic Centre for Marine Research, Institute of Marine Biology and Genetics, Greece,
2
National and Kapodistrian University of Athens, Faculty of Biology, Department of Ecology
and Systematics, Greece
571A
Distribution and phylogeny of the Sponge-Symbiont 'Candidatus Entotheonella
palauensis' in selected sponges from Micronesia
Georg Steinert*, Peter J. Schupp
Carl von Ossietzky University Oldenburg, Germany
572A
'Candidatus Ancillula trichonymphae', a novel lineage of endosymbiotic Actinobacteria
in termite gut flagellates of the genus Trichonympha
1
1
2
1
Jürgen F. H. Strassert* , Tim Köhler , Renate Radek , Andreas Brune
1
2
MPI for Terrestrial Microbiology, Germany, Free University of Berlin, Institute of
Biology/Zoology, Germany
573A
Reductive genome evolution in chemolithotrophic intracellular symbionts of deep-sea
Calyptogena clams
Yoshihiro Takaki*, Mamiko Nishino, Takeru Koshi-ishi, Shigeru Shimamura, Takao Yoshida,
Miwako Tsuda, Chiaki Kato, Tadashi Maruyama
Japan Agency for Marine -Earth Science and Technology, Japan
574A
Detection and determination of algal-polysaccharide-degrading bacteria in the digestive
tract of abalone Haliotis gigantea through a year
1
1
2
3
Reiji Tanaka* , Hiromitsu Miyawaki , Shunpei Iehata , Hiroto Maeda
1
2
3
Mie University, Japan, Antofagasta University, Chile, Kagoshima University, Japan
575A
Redefining 'Candidatus Arthromitus': segmented filamentous bacteria in arthropod guts
are members of Lachnospiraceae
Claire Thompson*, Rahel Vier, Aram Mikaelyan, Tobias Wienemann, Andreas Brune
Max Planck Institute for Terrestrial Microbiology, Germany
576A
Novel bacteriocyte-associate symbionts of Pineus strobi (Insecta: Hemiptera:
Adelgidae)
Elena Toenshoff, Gitta Szabo*, Daniela Gruber, Matthias Horn
University of Vienna, Austria
577A
In vivo expression screening for genes of Marinobacter adhaerens HP15 essential for
its interaction with the marine diatom Thalassosira weissflogii
Ingrid Torres-Monroy*, Matthias Ullrich
Jacobs University Bremen, Germany
52
PS08 – Microbial Symbioses
Monday 20 August
578A
The infection cycle of the intracellular Acanthamoeba symbiont Amoebophilus
asiaticus
1
1
2
1
Han-Fei Tsao* , Thomas Penz , Rok Kostanjšek , Matthias Horn
1
2
University of Vienna / Department of Microbial Ecology, Austria, Univerza v Ljubljani /
Oddelek za biologijo, Slovenia
579A
Outer membrane protein A of Vibrio cholerae suppresses its survival time in presence
or absence of Acanthamoeba castellanii
Soni Priya Valeru*
Karolinska Institutet, Sweden
580A
Microdiversity and footprints of recombination in populations of Verminephrobacter,
the heritable symbiont of earthworms
1
1
2
1
Flávia Viana* , Michael Macey , Kasper Kjeldsen , Andreas Schramm
1
2
Department of Bioscience, Microbiology, Aarhus University, Denmark, Center for
Geomicrobiology, Department of Bioscience, Aarhus University, Denmark
581A
Detection of an active nitrogen-fixing population in the gastrointestinal tract of the
wood-eating catfish Panaque nigrolineatus
1
2
3
4
Joy Watts* , Ryan McDonald , Fan Zhang , Harold Schreier
1
2
3
University of Portsmouth, United Kingdom, Towson University, USA, University of Maryland
4
Center for Environmental Science, USA, University of Maryland Baltimore County, USA
582A
Gut microbiota contributing to the growth of fast-growing transgenic fish is similar to
that in obese mammals
Qingyun Yan*, Yuhe Yu, Xuemei Li
Institute of Hydrobiology, Chinese Academy of Sciences, China
583A
The genome of an intracellur symbiont of deep sea clam, Calyptogena phaseoliformis,
is still in an early phase of reductive genome evolution
1
1
1
2
Takao Yoshida* , Yoshihiro Takaki , Shigeru Shimamura , Masatoshi Tsukahara , Maiko
2
3
3
4
1
Nezuo , Makiko Shimoji , Kazuhito Satou , Morimi Teruya , Tadashi Maruyama
1
2
Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Japan, BioJet
3
4
Co.,LTD, Japan, OIAS, Japan, OITC, Japan
PS09 – Pathways and Physiology
453A
Biodegradation of C7 and C8 iso-alkanes under methanogenic and sulfate-reducing
conditions
Nidal Abu Laban*, Kathy Semple, Rozlyn Young, Anh Dao, Julia Foght
University of Alberta/Department Biological Sciences, Canada
454A
Are microorganisms involved in freshwater humic matter degradation? A
metagenomics approach
1
2
2
Martin Allgaier* , Ivette Salka , Hans-Peter Grossart
1
2
Berlin Center for Genomics in Biodiversity Research, Germany, Leibniz-Institute of
Freshwater Ecology and Inland Fisheries, Germany
455A
Microbial influences on arsenic release from Japanese paddy soils
1
1
1
1
2
Seigo Amachi* , Keitaro Kudo , Eri Honma , Diantao Dong , Tomoyuki Makino , Noriko
2
Yamaguchi
1
2
Chiba University, Japan, National Institute for Agro-Environmental Sciences, Japan
53
PS09 – Pathways and Physiology
Monday 20 August
456A
Caspase homologs in prokaryotic genomes and metagenomes
1
1
2
2
Johannes Asplund Samuelsson* , John Larsson , Chris L Dupont , Shibu Yooseph ,
2
2
1
1
1
Johannes Goll , Mathangi Thiagarajan , Karolina Ininbergs , Narin Celepli , Björn Brindefalk ,
1
Birgitta Bergman
1
2
Stockholm University, Sweden, The J. Craig Venter Institute, United States
457A
Physiological characteristics of marine anammox bacteria enriched from sea
sediments, Hiroshima, Japan
1
1
1
1
2
Takanori Awata* , Tomonori Kindaichi , Noriatsu Ozaki , Akiyoshi Ohashi , Mamoru Oshiki ,
2
Satoshi Okabe
1
2
Hiroshima University, Japan, Hokkaido University, Japan
458A
Novel findings on degradation metabolic pathways of endocrine disrupters, persistent
organic pollutants and pharmaceuticals by ligninolytic fungi
1
2
2
2
2
Tomas Cajthaml* , Zdena Kresinova , Monika Cvancarova , Alena Filipova , Stefano Covino ,
3
4
Tatiana Stella , Monika Moeder
1
2
Institute of Microbiology, Academy of Sciences , Czech Republic, Institute of Microbiology,
3
v.v.i., Academy of Sciences of the Czech Republic, Czech Republic, Università degli Studi
4
della Tuscia, Italy, UFZ-Centre for Environmental Research Leipzig-Halle, Germany
459A
Genome characterization of Pelosinus fermentans JBW45 isolated during in situ
stimulation for Cr(VI) reduction
1
1
1
2
3
Laura Camilleri* , Kara De Leon , Mary Young , Steven Brown , Jeffrey Skerker , Morgan
3
3
3
1
Price , Adam Deutschbauer , Adam Arkin , Matthew Fields
1
2
Montana State University, United States, Oak Ridge National Laboratory, United States,
3
Lawrence Berkeley National Laboratory, United States
460A
Proteomic, physiological, and in silico testing of economic tradeoffs in metabolic
networks
Ross Carlson*, Reed Taffs, James Folsom
Montana State University, United States
461A
Proteome analyses of hydrogen producing hyperthermophilic archaeon Thermococcus
onnurineus NA1 in different one-carbon substrate culture conditions
1
1
1
1
1
Young-Ho Chung , Yoon-Jung Moon* , Joseph Kwon , Sung-Ho Yun , Hye Li Lim , Min-Sik
2
2
2
1
1
Kim , Sung Gyun Kang , Jung-Hyun Lee , Jong -Soon Choi , Seung Il Kim
1
2
Korea Basic Science Institute, South Korea, Korea Ocean Research and Development
Institute, South Korea
462A
Genes to phenotype: establishing a physiological and metabolic basis of mixotrophy in
model marine bacteria
Michael Cunliffe*
Marine Biological Association of the United Kingdom, United Kingdom
463A
Bacterial amyloids are abundant and have multiple functions in biofilms
1
2
2
3
Morten Simonsen Dueholm* , Poul Larsen , Mads Toft Søndergård , Daniel Otzen , Per
2
Halkjær Nielsen
1
2
Aalborg University, Denmark, Aalborg University, Section of
3
Biotechnology, Denmark, Aarhus University, iNANO, Denmark
464A
The dark way of making oxygen
Katharina Ettwig*, Daan R Speth, Joachim Reimann, Ming Liang Wu, Mike S.M. Jetten, Jan
T.M. Keltjens
Radboud University, Dept. of Microbiology, Netherlands
54
PS09 – Pathways and Physiology
Monday 20 August
465A
The overlapping gene pair htgA/yaaW in Escherichia coli O157:H7 EDL933
1
2
2
3
3
Lea Fellner* , Niklas Bechtel , Richard Landstorfer , Svenja Simon , Daniela Oelke , Siegfried
2
2
Scherer , Klaus Neuhaus
1
2
Technische Universitaet Muenchen, Germany, Lehrstuhl für mikrobielle Oekologie,
Wissenschaftszentrum Weihenstephan, Technische Universitaet Muenchen, Germany,
3
Lehrstuhl für Datenanalyse und Visualisierung, Fachbereich Informatik und
Informationswissenschaft, Universitaet Konstanz, Germany
466A
Ecology and evolution of a hybrid isoprenoid-producing actinomycete lineage
Kelley Gallagher*, Paul Jensen
Scripps Institution of Oceanography, United States
467A
Reduction of methacrylate by Geobacter sulfurreducens AM-1 - new property relevant
for industrial wastewater treatment
1
2
3
3
Alexander Galushko* , Anna Obraztsova , Kestas Laurinavichius , Oxana Arkhipova , Galina
4
5
6
Mikoulinskaia , Fred Rainey , Vasilii Akimenko
1
2
3
Vienna University, Austria, Synthetic Genomics, USA, Institute Biochemistry Physiology
4
5
Microorganisms RAS, Russia, Institute Bioorganic Chemistry RAS, Russia, University of
6
Alaska, USA, Institute Biochemistry Physiology Microorganisms RAS, USA
468A
The role of C4 metabolism in the marine diatom Phaeodactylum tricornutum
1
1
2
3
Maya Haimovich-Dayan* , Nitsan Garfinkel , Daniela Ewe , Yehouda Marcus , Ansgar
2
2
1
Gruber , Peter G. Kroth , Aaron Kaplan
1
2
3
Hebrew University, Israel, Universität Konstanz, Germany, Tel Aviv University, Israel
469A
Polyphosphate storage in response to nitrogen limitation in Beggiatoa alba
Sandra Havemeyer*, Heide Schulz-Vogt
Max Planck Institute for Marine Microbiology, Germany
470A
Characterization of novel sulfate-reducing bacteria isolated from tidal flat sediment
1
2
2
2
Yuriko Higashioka* , Hisaya Kojima , Miho Watanabe , Manabu Fukui
1
2
Kochi National College of Technology, Japan, Institute of Low Temperature Science,
Hokkaido University, Japan
471A
Salmonella Stn regulates membrane composition and integrity
Toshiya Hirayama*, Masayuki Nakano
Nagasaki University, Japan
472A
The poly(ethylene succinate) (PES)degradation of thermophilic actinomycetes 06174T-1
in soil
1
2
Kim Chi Hoang* , Min Tseng
1
2
Ta Hwa Institute of Technology, Taiwan, Bioresource Collection and Research Center, Food
Industry Research and Development Institute, Taiwan
473A
Bacterial degradation of steroid compounds - new insights into the side chain
degradation pathway
1
2
2
1
Johannes Holert* , Onur Yücel , Žarko Kulić , Bodo Philipp
1
2
University of Muenster, Germany, University of Konstanz, Germany
474A
Expression of genes involved in aerobic degradation of dichloromethane by
Xanthobacter autotrophicus under different nutritional conditions
Akifumi Hosoda*, Hiroto Tamura
Meijo University, Japan
475A
Characterization of tert-butyl-alcohol-hydroxylase, a Rieske oxygenase in MTBE
degradation pathway of Methylibium petroleiphilum PM1
1
1
2
Krassimira Hristova* , Anthony Kappell , Jian Sun
1
2
Marquette University, United States, China Agricultural University, China
55
PS09 – Pathways and Physiology
Monday 20 August
476A
Metabolic adaptations in microbial communities in the Baltic Sea region
1
1
2
2
2
Karolina Ininbergs* , John Larsson , Christoper L Dupont , Shibu Yooseph , Johannes Goll ,
2
1
1
1
Mathangi Thiagarajan , Narin Celepli , Johannes Asplund-Samulesson , Björn Brindefalk ,
1
Birgitta Bergman
1
2
Stockholm University, Sweden, J. Craig Venter Institute, USA
477A
Comparative genomic analysis and BTEX degradation pathways of
Pseudoxanthomonas spadix BD-a59
Che Ok Jeon, Eun Jin Choi*, Hyun Mi Jin, Renukaradhya K. Math
Chung-Ang University, South Korea
478A
Involvement of the anaerobic respiration of Shewanella Oneidensis MR-1 in the stability
of extracellular U(VI) nanowires
Shenghua Jiang, Sunhwa Park*, Hor-Gil Hur
Gwangju Institute of Science & Technology, South Korea
479A
Dichloromethane degradation in sediments and identification of a dichloromethanefermenting Dehalobacter sp.
1
2
3
Shandra D. Justicia-Leon* , E. Erin Mack , Frank E. Löffler
1
2
Georgia Institute of Technology, United States, DuPont Corporate Remediation Group,
3
United States, University of Tennessee, United States
480A
Optimization of culture conditions for the production of butanol from sweet sorghum
juice by Clostridium beijerinckii SBP2-HB
1
2
2
3
Miho Kanemoto* , Manami Akiyama , M. Habibur Rahman , Yoshinori Sato , Shigeru
2
2
2
2
Chohnan , Youji Nitta , Yasurou Kurusu , Hiroyuki Ohta
1
2
3
Tokyo University of Agriculture and Technology, Japan, Ibaraki University, Japan, National
Research Institute for Cultural Properties, Tokyo, Japan
481A
Evidence of hybrid N2O production from NH2OH and NO2 in cell suspension of
15
oligotrophic ammonia-oxidizing bacterial strain Nitrosomonas sp. AL212 using a N
18
and O tracer technique
1
2
1
Chie Katsuyama* , Keisuke Koba , Yuichi Suwa
1
2
Chuo University, Japan, Tokyo University of Agriculture and Technology, Japan
482A
Proteomic characterization of polycyclic aromatic hydrocarbon(PAHs) - utilizing marine
bacterium, Novosphingobium pentaromativorans US6-1
1
1
1
2
Seung Il Kim* , Sungho Yun , Young Ho Chung , Kae Kyoung Kwon
1
2
Korea Basic Science Institute, South Korea, Korea Ocean Research & Development
Institute, South Korea
483A
Early lessons from sequencing the Desulfitobacterium pangenome, from carbon to
silicon and back again
1
2
2
3
4
5
Thomas Kruse* , Julien Maillard , Christof Holliger , Nico Boon , Jan Gerritse , Ute Lechner ,
6
7
8
1
1
Lynne Goodwin , Patrick Chain , Betty Lobos , Willem de Vos , Hauke Smidt
1
2
Wageningen University, Laboratory of Microbiology, Netherlands, Ecole Polytechnique
3
Fédérale de Lausanne / Laboratory for Environmental Biotechnology, Switzerland, Ghent
University, Laboratory of Microbial Ecology and Technology (LabMET), Belgium,
4
5
Deltares, Netherlands, Martin-Luther-Universität Halle, Institute of Biology/Microbiology,
6
7
Germany, DOE Joint Genome Institute, USA, Los Alamos National Laboratory / Bioscience
8
Division, USA, Washington University School of Medicine, Genome Sequencing Center, USA
484A
Peptidolytic systems of Synergistetes bacteria, with an emphasis on a novel
fluoroacetate-degrading bacterium, Synergistes sp. strain MFA1
1
1
1
2
1
Lex Leong* , Stuart Denman , Carl Davis , Phil Hugenholtz , Chris McSweeney
1
2
CSIRO Livestock Industries, Australia, Australian Centre for Ecogenomics, Australia
-
56
PS09 – Pathways and Physiology
Monday 20 August
485A
Metaproteomic study of functional microbial community in thermophilic anaerobic
digestion
Yi-Wen Lin, Yi -Chia Chang, Shir-Ly Huang*
National Central University, Taiwan
486A
A protein exclusive of filamentous cyanobacteria involved in determination of cell
division plane
1
1
2
2
1
Dinka Mandakovic* , Carla Trigo , José Enrique Frías , Enrique Flores , Luz Mónica Vásquez
1
2
Pontificia Universidad Católica de Chile, Chile, Instituto de Bioquímica Vegetal y
Fotosíntesis, Consejo Superior de Investigaciones Científicas y Universidad de Sevilla,
Espana
487A
Genomic investigation of the filamentous foam forming Candidatus 'Microthrix
parvicella' isolated from activated sludge
1
1
1
1
2
Simon McIlroy* , Rikke Kristiansen , Mads Albertsen , Søren Karst , Simona Rossetti , Valter
2
1
3
3
1
Tandoi , Jeppe Nielsen , Steve Petrovski , Robert Seviour , Per Nielsen
1
2
3
Aalborg University, Denmark, Water Research Institute, CNR, Italy, La Trobe University,
Australia
488A
Changes in the metabolic profile of Streptomyces coelicolor under heavy metal ion
stress
1
2
3
Anne Morgenstern* , Anne Behrend , Dieter Spiteller
1
2
Max-Planck Institute For Chemical Ecology, Germany, Leibniz-Institute of Vegetable and
3
Ornamental Crops, Germany, University of Konstanz, Germany
489A
A new way of activating non-substituted aromatic hydrocarbons: Identification of direct
carboxylation of naphthalene
Housna Mouttaki*, Jörg Johannes, Rainer U. Meckenstock
Institute of Groundwater Ecology, Helmholtz Zentrum München, Germany
490A
The role of dehydroascorbate as surveillance molecule of oxidative stress and
programmed cell death
Omer Murik*, Aaron Kaplan
Hebrew University of Jerusalem, Israel
491A
Insight into the sulfur metabolism of Thioalkalivibrio sulfidiphilus HL-EbGr7 with
quantitative proteomics
1
2
3
4
4
Gerard Muyzer* , Dimitry Yu. Sorokin , Peter Schaap , Peter Verhaert , Martijn Pinkse
1
2
Institute for Biodiversity and Ecosystem Dynamics, Netherlands, Winogradsky Institute for
3
4
Microbiology, Russia, Wageningen University, Netherlands, Delft University of Technology,
Netherlands
492A
Benzene degradation under anaerobic conditions
Kerstin Nicolaisen*, Rainer U. Meckenstock
Institute of Groundwater Ecology, Helmholtz Zentrum München, Germany
493A
Study of a novel oxygen-sensitive, denitrifying Bacillus abundant in soil
Maja Nielsen*, Vincenzo Cerciello, Kasper U. Kjeldsen, Eline P. Hansen, Lars Schreiber,
Andreas Schramm, Kai Finster
Aarhus University, Denmark
494A
Oxidation kinetics of nitrite-oxidizing bacteria from activated sludge
1
2
1
Boris Nowka* , Holger Daims , Eva Spieck
1
2
University of Hamburg/Microbiology, Germany, University of Vienna/Microbial
Ecology, Austria
57
PS09 – Pathways and Physiology
Monday 20 August
495A
The mechanism of heterocyst development in the cyanobacterium Anabaena sp.
PCC7120 under nitrogen deprived conditions
Masayuki Ohmori*, Shigeki Ehira
Chuo University, Japan
496A
Meta-genomic analysis for the elucidation of physiology of an anammox bacterium,
Candidatus 'Brocadia sinica'
1
2
1
1
Mamoru Oshiki* , Kaori Shinyako , Hisashi Satoh , Satoshi Okabe
1
2
Hokkaido University, Japan, Tokyo Engineering Consultants Co. LTD, Japan
497A
A bacterium representing marine agarolytic novel genus in the family
Flavobacteriaceae, isolated from seawater
1
1
1
1
2
Seong Chan Park* , Yeoung Min Hwang , Han Na Choe , Keun Sik Baik , Ye-Seul Hwang ,
2
1
Duwoon Kim , Chi Nam Seong
1
2
Sunchon National University, South Korea, Chonnam National University, South Korea
498A
Constraining the nitrogen metabolism of deep-sea vent chemosynthetic microbes using
stable nitrogen isotopic analyses: An experimental study at in situ seafloor pressures
1
2
1
1
Ileana Perez-Rodriguez* , Stefan Sievert , Marilyn Fogel , Dionysis Foustoukos
1
2
Carnegie Institution of Washington, USA, Woods Hole Oceanographic Institution, USA
499A
Relative importance of chemosynthesis in a polluted tropical estuary
Alex Prast*, Camila Signori, Giselle Parno, Bruno Rego, Ricardo Pollery, Angela Sanseverino
University Federal of Rio de Janeiro, Brazil
500A
Different ecophysiologies of two Dehalococcoides isolates from the Bitterfeld region of
germany
1
1
2
3
3
Marlén Pöritz* , Ulrike Heinemann , Lorenz Adrian , Tesfaye Wubet , Mika Tarkka , Ivonne
2
1
Nijenhuis , Ute Lechner
1
Martin-Luther-University Halle-Wittenberg, Institute of Biology/Microbiology, Germany,
2
Helmholtz-Centre for Environmental Research – UFZ, Department of Isotope
3
Biogeochemistry, Germany, Helmholtz-Centre for Environmental Research – UFZ,
Department of Soil Ecology, Germany
501A
Genome of Lactococcus piscium strain MKFS47 from modified atmosphere packaged
meat
1
1
2
2
2
Riitta Rahkila* , Per Johansson , Margarita Andreevskaya , Pia Laine , Lars Paulin , Petri
2
1
Auvinen , Johanna Björkroth
1
Department of Food Hygiene and Environmental Health, University of Helsinki, Finland,
2
Institute of Biotechnology, University of Helsinki, Finland
502A
Response to phosphorus limitation by the chemoheterotrophic strain Pseudovibrio sp.
FO-BEG1
Stefano Romano*, Vladimir Bondarev, Thorsten Dittmar, Heide Schulz-Vogt
Max Planck Institute for Marine Microbiology, Germany
503A
Medium optimization and production of the wild type pesticide degrader strain
Aminobacter MSH1 in a Bioreactor
1
2
3
2
Nadja Schultz-Jensen* , Berith Elkær Knudsen , Zuzanna Frkova , Jens Aamand , Jette
4
2
Thykaer , Sebastian Reinhold Sørensen
1
2
National Geological Survey of Greenland and Denmark (GEUS), Denmark, National
3
geological Survey of Greenland and Denmark (GEUS), Denmark, Department of Environment
4
Science, Denmark Department of Systems Biology Technical University of Denmark Denmark
504A
The inhibitory potential of silver-zinc nanoparticles on Aspergillus parasiticus
1
1
1
2
Ebrahim Sedaghati* , Saied Mollayi , Fatemeh Rostami , Nader Doraki
1
Department of Plant Protection, Faculty of Agriculture, Vali-e-Asr University of
2
Rafsanjan, Iran, Rafsanjan Food Control Laboratory (RFCL), Iran
58
PS09 – Pathways and Physiology
Monday 20 August
505A
Key aromatic dioxygenases are involved in the catabolism of hydroxylated- benzoates
and -phenylacetates in Burkholderia xenovorans LB400
Michael Seeger*, Romero Maria Jose
Universidad Tecnica Federico Santa Maria, Chile
506A
Molecular insights into anaerobic biological dehalogenation - An important
environmental process unraveled by combined genomic, biochemical and
physiological studies
1
2
3
4
5
3
Jana Seifert , Goris Tobias , Adrian Lorenz , Boll Matthias , Lechner Ute , Nijenhuis Ivonne ,
5
2
3
3
3
Sawers Gary , Schubert Torsten , Seifert Jana* , Tarkka Mika , von Bergen Martin , Wubet
3
2
Tesfaye , Diekert Gabriele
1
2
UFZ-Helmholtz Center for Environmental Research GmbH, Germany, Friedrich Schiller
3
University Jena, Germany, UFZ-Helmholtz Center for Environmental Research, Germany,
4
5
University Leipzig, Germany, Martin-Luther-University Halle, Germany
507A
Organohalide respiring Firmicutes – from dedicated degraders to all-rounders
Hauke Smidt*, Thomas Kruse, Farai Maphosa, Tian Ye
Wageningen University, Netherlands
508A
Identification of a robust bacterial haloacid uptake system
Jimmy Tsang*, Xianbin Su
School of Biological Sciences, The University of Hong Kong, Hong Kong
509A
Casting a net: filaments produced by Microcystis sp. in field and laboratory populations
1
1
1
1
2
2
Gad Weiss* , Moshe Harel , Einat Daniel , Avraham Wilenz , Ora Hadas , Assaf Sukenik ,
3
4
1
1
Bojan Sedmak , Elke Dittmann , Sergei Braun , Aaron Kaplan
1
2
The Hebrew University of Jerusalem, Israel, Israel Oceanographic and Limnological
3
4
Research, Israel, National Institute of Biology, Slovenia, University of Potsdam, Germany
510A
Mercury methylation by sulfate reducers: assessment of a high-throughput method for
isolation and physiological characterisation
Colin Yannick*, Marisol Goñi-Urriza, Jérome Gury, Pierre Caumette, Rémy Guyoneaud
Université de Pau et des Pays de l'Adour, France
511A
Physiological and genomic characterization of a newly isolated Geobacter sp. strain AY
that detoxify 1,2-dichloroethane to ethylene
1
2
3
Naoko Yoshida* , Kiyotoshi Asahi , Arata Katayama
1
2
Toyohashi University of Technology, Japan, Environmental Science Institute of Nagoya
3
city, Japan, EcoTopia Institute, Nagoya University, Japan
512A
Isolation of an L-amino acid oxidase-producing marine bacteria and analysis of its
physiological and biochemical properties
Zhiliang Yu*, Hua Qiao, Ning Zhou
College of Biological and Environmental Engineering, Zhejiang University of
Technology, China
59
PS09 – Pathways and Physiology
Monday 20 August
PS10 – Single Cell Microbiology
214A
Improvements of geneFISH method to enable a broader application
1
1
2
2
Jimena Barrero Canosa* , Cristina Moraru , Elke Allers , Melissa Duhaime , Matthew
2
1
Sullivan , Rudolf Amann
1
2
Max Planck Institute for Marine Microbiology, Germany, University of Arizona, United States
215A
Flow cytometric fingerprinting – methods and controls for monitoring dynamics in
complex microbial communities
Birke Brumme*, Christin Koch, Susann Müller
UFZ - Helmholtz Centre for Environmental Research, Germany
216A
Identification of living ammonia-oxidizing archaea by Raman microspectroscopy - a
first step towards targeted sorting
Christoph Böhm, David Berry, Markus Schmid*, Michael Wagner, Michael Wozak
University of Vienna, Austria
217A
Development of a bioreporter assay for the detection of methyl halides
Muhammad Farhan Ul Haque*, Thierry Nadalig, Françoise Bringel, Hubert Schaller, Stéphane
Vuilleumier
University of Strasbourg, France
218A
Destabilized GFP allows making the distinction between short-term and long-term
effect of nutrient status in process-related conditions
1
2
2
1
1
Shanshan Han* , Frank Delvigne , Alison Brognaux , Gitte Charbon , Søren Sørensen
1
2
University of Copenhagen, Institute of Biology, Denmark, Univesité de Liège, Gembloux
Agro-Bio Tech, Belgium
219A
Use of FISH in difficult environments: application to hydrolysed wheat straw
Jennifer Harris-Hellal*, Hafida Tris, Fabienne Battaglia-Brunet, Catherine Joulian
French geological survey (BRGM), France
220A
Acquiring Reference Genomes from Uncultured Microbes by Micromanipulation and
Low-complexity Metagenomics
Søren M. Karst*, Mads Albertsen, Jeppe L. Nielsen, Kåre L. Nielsen, Per H. Nielsen
Aalborg University/Department of Biotechnology, Chemistry, and Environmental
Engineering, Denmark
221A
Improving robustness in batch cultures by investigating heterogeneity at single cell
level
1
2
2
3
4
Luisa Lundin* , Shanshan Han , Inês Nunes , Anna-Lena Heins , Rita Lencastre Fernandes ,
2
2
3
4
Gitte Charbron , Waleed Abu Al-Soud , Anna Eliasson Lantz , Krist Gernaey , Søren J.
2
Sørensen
1
2
University of Copenhagen, Denmark, University of Copenhagen/Department of Biology,
3
Denmark, Technical University of Denmark/Department of Systems Biology, Denmark,
4
Technical University of Denmark/Department of Chemical and Biochemical Engineering,
Denmark
222A
History-dependence in bacterial signaling
Roland Mathis*, Martin Ackermann
ETHZ/Eawag, Switzerland
223A
Tracking sources and dynamics of bacterial communities in homes
Marzia Miletto*, Steven E. Lindow
University of California, Berkeley, United States
60
PS10 – Single Cell Microbiology
Monday 20 August
224A
Stochastic noise on RpoS expression determines cellular permissiveness for horizontal
gene transfer of an Integrative and Conjugative Element
Ryo Miyazaki*, Marco Minoia, Nicolas Pradervand, Sandra Sulser, Jan Roelof van der Meer
University of Lausanne, Switzerland
225A
High resolution single cell analytics to follow microbial community dynamics in natural
ecosystems
Susann Muller*, Thomas Hübschmann, Bärbel Kiesel, Ingo Fetzer, Sabine Kleinsteuber,
Carsten Vogt, Hauke Harms
Helmholtz Centre for Environmental Research, Germany
226A
Evaluation of the effect of sample preparation, chemical fixation and hybridization on
13
15
isotopic composition of C- and N-labelled microbial cells using NanoSIMS
1
1
1
1
Niculina Musat* , Hryhoriy Stryhanyuk , Lorenz Adrian , Petra Bombach , Jean-Nicolas
2
1
Audinot , Hans Hermann Richnow
1
2
Helmholtz Centre for Environmental Research - UFZ, Germany, Centre de Recherche
Gabriel Lippmann, Luxembourg
227A
Single-cell level based approach to investigate bacterial metabolism during batch
industrial fermentation
Marta Nierychlo*, Poul Larsen, Niels Thomas Eriksen, Per Halkjær Nielsen
Department of Biotechnology, Chemistry and Environmental Engineering; Aalborg University,
Denmark
228A
Single-cell activity of SAR86 differs from other gammaproteobacterial subgroups in
waters off the west Antarctic Peninsula in summer and fall
Mrinalini Nikrad*, Matthew T. Cottrell, David L. Kirchman
University of Delaware, United States
229A
Single cell genomics of segmented filamentous bacteria (SFB)
1
2
2
2
Sünje Johanna Pamp* , Paul Blainey , Eoghan Harrington , Stephen R. Quake , David A.
2
Relman
1
2
Stanford University School of Medicine / Dept. of Microbiology & Immunology, USA, Stanford
University, USA
230A
A single cell approach for revealing the phylogenetic identity of unknown sulfatereducing microbes in a marine sediment
1
1
2
1
Dorthe G. Petersen* , Karen G. Lloyd , Lars Schreiber , Kasper U. Kjeldsen , Bo B.
1
2
Jørgensen , Andreas Schramm
1
2
Aarhus University/Center for Geomicrobiology, Department of Bioscience, Denmark, Aarhus
University/Department of Bioscience, Microbiology, Denmark
231A
Linking emulsion PCR
1
2
1
1
Leena Pitkänen* , Manu Tamminen , Christina Lyra , Marko Virta
1
2
University of Helsinki, Finland, Massachusetts Institute of Technology, United States
232A
Uncovering the dark matter of the human microbiota through high throughput single
cell genomics and targeted pangenomics
1
2
2
3
3
Mircea Podar* , Alisha Campbell , James Campbell , Tanja Woyke , Alexander Sczyrba ,
3
4
4
Susannah Tringe , Ann Griffen , Eugene Leys
1
2
Oak Ridge National Laboratory and University of Tennessee, USA, Oak Ridge National
3
4
Laboratory, USA, Joint Genome Institute, USA, Ohio State University, USA
233A
Detection of bacterial gene expression by mRNA PNA FISH - a new user friendly and
rapid molecular test
1
2
3
2
Anne K I Rasmussen , Tine Yding Wolff , Trine Rolighed Thomsen* , Jan Lorenzen
1
2
3
AdvanDx, Denmark, The Danish Technological Inst., Life Sci. Div., Denmark, Chemistry,
and Environmental Engineering, Aalborg Univ., Denmark
61
PS10 – Single Cell Microbiology
Monday 20 August
234A
Insights into microbial functioning using Raman Stable Isotope Probing (RSIP) at the
single cell level
1
2
3
1
Daniel Read* , Rich Boden , Colin Murrell , Andrew Whiteley
1
2
Centre for Ecology & Hydrology, United Kingdom, Plymouth University, United Kingdom,
3
University of East Anglia, United Kingdom
235A
Single cell protein production and growth rates of natural marine bacterial populations
measured with the methionine analog homopropargylglycine
1
2
1
Ty Samo* , Steve Smriga , Farooq Azam
1
2
UC San Diego/Scripps Institution of Oceanography, United States, Massachusetts Institute
of Technology, United States
236A
Reads2Type: an online tool for rapid bacterial typing
Dhany Saputra*, Thomas Sicheritz Pontén, Ole Lund
Danmarks Tekniske Universitet, Denmark
237A
Solid-phase cytometry as a tool for sensitive and rapid quantification of Vibrio
cholerae/Vibrio mimicus in environmental water samples
1
1
2
1
Sonja Schauer* , Regina Sommer , Andreas Farnleitner , Alexander Kirschner
1
2
Medical University of Vienna, Austria, Vienna University of Technology, Austria
238A
Nitrogen fixation in the presence of ammonium: a role for phenotypic heterogeneity and
bet hedging
1
2
3
3
2
Frank Schreiber* , Niculina Musat , Mathias Kirf , Carsten Schubert , Marcel Kuypers , Martin
1
Ackermann
1
2
ETH Zurich and Eawag, Switzerland, Max Planck Institute for marine Microbiology,
3
Germany, Eawag, Switzerland
239A
First core facility for microbial single cell genomics
R. Stepanauskas*, B. Thompson, N. Poulton, B. Swan, E. Dmitrieff, B. Tupper, W. Bellows, E.
Field, M. Sieracki
Bigelow Laboratory for Ocean Sciences, United States
240A
Regulation of ICEclc transfer in Pseudomonas knackmussii B13
Sandra Sulser*, Veronica Bellini, Jan Roelof van der Meer
University of Lausanne, Switzerland
241A
Miniaturizing genomics: single genome barcoding and sequencing
1
2
3
1
Manu Tamminen* , Francois Vigneault , Marko Virta , Eric Alm
1
2
3
Massachusetts Institute of Technology, USA, Harvard Medical School, USA, University of
Helsinki, Finland
242A
Analysing bioavailability of different molecules with microbial bioreporters
Marko Virta*
University of Helsinki, Finland
62
PS10 – Single Cell Microbiology
Tuesday 21 August
PS11 – Archaea: Important players in diverse microbial ecosystems
001B
Methanogenic and methanotrophic archaeon communities in Antarctic permafrost
samples differed in biogenic methane content
1
2
3
3
Irina Alekhina* , Ilya Stepanov , Andrey Abramov , Ekaterina Karavaevskaya , Elizaveta
3
3
4
2
Rivkina , David Gilichinsky , Jean Robert Petit , Sergey Bulat
1
2
Arctic and Antarctic Research Institute, Russian Federation, Petersburg Nuclear Physics
3
Institute RAS, Russian Federation, Institute of Physicochemical and Biological Problems in
4
Soil Science RAS, Russian Federation, LGGE CNRS-UJF, France
389B
Temporal patterns in the abundance and diversity of ammonia oxidizing archaea and
bacteria in aquarium biofilters
1
2
3
3
2
Samik Bagchi* , Siegfried E. Vlaeminck , Laura Sauder , Josh D. Neufeld , Willy Verstraete ,
2
Nico Boon
1
2
King Abdullah University of Science and Technology (KAUST), Saudi Arabia, Laboratory of
3
Microbial Ecology and Technology (LabMET), Ghent University, Belgium, Department of
Biology, University of Waterloo, Canada
002B
The distribution and ecophysiology of novel thermophilic, non-ammonia-oxidizing
thaumarchaea in Yellowstone National Park
Jacob Beam*, Zackary Jay, Mark Kozubal, William Inskeep
Montana State University, USA
003B
Archaeal abundance across a pH gradient in an arable soil and its relationship with
bacterial and fungal growth rates
Per Bengtson, Anna Sterngren*, Johannes Rousk
Lund University, Sweden
004B
Abundance and diversity of Ammonia-oxidizing Archaea and Bacteria in Lake Superior
and Erie
1
2
2
Annette Bollmann* , Robert Michael McKay , George Bullerjahn
1
2
Miami University, United States, Bowling Green State University, United States
005B
Archaeal community structure and diversity of Charcoal from Amazonian dark earth
Fabiana Cannavan*, Amanda Lima, Maria Brossi, Acácio Navarrete, Lucas Mendes, Mariana
Germano, Siu Tsai
University of São Paulo - Center of Nuclear Energy in Agriculture, Brazil
006B
Abundance and diversity of nitrifying prokaryotes in drinking water treatment plants
1
1
2
2
1
Mei-Chun Chen* , Toshikazu Fukushima , Sin-Ming Liu , Pei-Chu Chen , Liang-Ming Whang
1
2
National Cheng Kung University, Taiwan, Taiwan Water Corporation, Taiwan
007B
Archaeal and Bacterial Abundance Patterns in Sediments of Aarhus Bay, Denmark
Xihan Chen*, Mark Lever, Bo Barker Jørgensen
Aarhus University, Denmark
008B
Representatives of the uncultured Euryarchaeota Clade LDS prevail among filterable
Archaea in northern freshwater habitats
1
2
Anna Fedotova* , Svetlana Dedysh
1
2
Winogradsky Institute of Microbiology, Russia, Winogradsky Institute of Microbiology
Russian Academy of Sciences, Russia
009B
Enrichment and characterization of three freshwater ammonia-oxidizing archaea
1
2
1
Elizabeth French* , Jessica Kozlowski , Annette Bollmann
1
2
Miami University, USA, University of Alberta, Canada
63
PS11 – Archaea: Important players in diverse microbial ecosystems
Tuesday 21 August
010B
Methanogenic archaea in a Sub-Arctic acidic palsa peatland
1
2
1
3
1
Lars Ganzert* , Andrea Kiss , Susanne Liebner , Dirk Wagner , Mette Svenning
1
2
Universtiy of Tromsø, Arctic and Marine Biology, Norway, Alfred Wegener Institute for Polar
3
and Marine Research, Periglacial Research, Germany, Helmholtz Centre Potsdam, German
Centre for Geosciences, Germany
011B
Towards understanding geomicrobiology of an extreme environment: characterization
of a novel Acidianus species involved in iron a sulphur cycles isolated from CopahueCaviahue acidic geothermal area
1
2
1
3
Alejandra Giaveno* , María Sofía Urbieta , Ricardo Ulloa , Elena González Toril , Edgardo
2
Donati
1
2
IDEPA (CCT Comahue-CONICET- UNCo), Argentina, CINDEFI Universidad Nacional de La
3
Plata, Argentina, Centro de Astrobiología (INTA CSIC), Espana
012B
Niche specialization of terrestrial thaumarchaea
1
2
3
4
Cecile Gubry-Rangin* , Christopher Quince , Robert Griffiths , Michael Schloter , James
1
1
Prosser , Graeme Nicol
1
2
3
University of Aberdeen, United Kingdom, University of Glasgow, United Kingdom, Centre for
4
Ecology and Hydrology, United Kingdom, Helmholtz Zentrum München, United Kingdom
013B
Archaea diversity and their roles on nitrogen cycling at extreme lake
1
2
Yasemin Gulecal* , Yildirim Dilek
1
2
Istanbul University, Turkey, University of Miami, USA
014B
Archaeal versus bacterial ammonia oxidation in oligotrophic and eutrophic freshwater
sediments
1
2
1
Martina Herrmann* , Oliver Spott , Kirsten Küsel
1
2
Friedrich Schiller University Jena, Institute of Ecology, Germany, Helmholtz Centre for
Environmental Research - UFZ, Department Soil Physics, Germany
015B
Ammonium oxidation kinetics of a natural microbial population dominated by Archaea
Rachel Horak, Allan Devol*, Wei Qin, David Stahl, Anitra Ingalls, Virginia Armbrust
University of Washington, USA
286B
Niche partitioning of marine group i crenarchaeota in the euphotic and upper
mesopelagic zones of the east china sea
1
2
2
2
Anyi Hu* , Nianzhi Jiao , Rui Zhang , Yang Zao
1
2
Institute of Urban Environment, Chinese Academy of Sciences, China, Xiamen University,
China
016B
Archaeal nitrification in acidic forest soils receiving high atmospheric N deposition
1
2
3
2
2
4
Kazuo Isobe* , Junko Ikutani , Yuichi Suwa , Yu Takebayashi , Muneoki Yoh , Yunting Fang ,
4
1
1
2
Jiangming Mo , Keishi Senoo , Shigeto Otsuka , Keisuke Koba
1
2
The University of Tokyo, Japan, Tokyo University of Agriculture and Technology, Japan,
3
4
Chuo University, Japan, Chinese Academy of Sciences, China
017B
Enrichment and characterization of autotrophic ammonia-oxidizing thaumarchaea from
an agricultural soil
1
2
1
3
4
Man-Young Jung* , Jong-Geol Kim , Soo-Je Park , Jaap Damsté , Eugene Madsen , Sung1
Keun Rhee
1
2
Chungbuk National University, South Korea, Chungbuk national university, South Korea,
3
4
NIOZ Royal Netherlands Institute for Sea Research, Netherlands, Cornell University, USA
018B
Methanogenesis in deep warm groundwater
1
1
2
1
3
Kenji Kato* , Kazuyo Nagaosa , Urumu Tsunogai , Hiroaki Nashimoto , Hideki Yoshikawa ,
3
3
3
Yoshito Sasaki , Takahiro Asano , Kazuhiro Aoki
1
2
3
Shizuoka University, Japan, Nagoya University, Japan, JAEA, Japan
64
PS11 – Archaea: Important players in diverse microbial ecosystems
Tuesday 21 August
019B
Prevalence and diversity of ammonia-oxidising archaea and bacteria during
composting of municipal waste
Nabla Kennedy*, David Dowling, David Ryan
Institute of Technology, Carlow, Ireland
020B
Archaea of the Miscellaneous Crenarchaeotal Group (MCG) are abundant, diverse, and
widespread in marine sediments
1
2
3
4
5
Kyoko Kubo* , Karen G. Lloyd , Jennifer Biddle , Rudolf Amann , Andreas Teske , Katrin
4
Knittel
1
2
Institute of Low Temperature Science, Hokkaido University, Japan, Aarhus University,
3
4
Denmark, University of Delaware, USA, Max Planck Institute for Marine Microbiology,
5
Germany, University of North Carolina at Chapel Hill, USA
021B
Effect of carbon source on microbial community structure in a high cell density
anaerobic reactor
Kankana Kundu*, Shilpi Sharma, T R Sreekrishnan
Indian Institute of Technology, Delhi, India
022B
The existence of ammonia-oxidizing archaea in wastewater treatment plants
1
2
1
1
Halil Kurt* , Özgür melih Çelik , Mert Kumru , Alper Tunga Akarsubaşı
1
2
Istanbul Technical University, Turkey, Universitätsmedizin Berlin, Charite, Germany
023B
Acidophilic ammonia oxidising archaea: explaining high rates of nitrification in low pH
soils?
Laura Lehtovirta*, James Prosser, Graeme Nicol
University of Aberdeen, United Kingdom
024B
Opening the archaeal box in an oligotrophic freshwater environment
1
2
3
4
Marc Lliros* , Tamara García-Armisen , Sean A Crowe , François Darchambeau , Cedric
5
2
6
6
6
Morana , Céline Michiels , Melodie Scmitz , Kathleen de Saedeleer , Laetitia Montante ,
4
5
5
4
2
Floeur Roland , Wim Thiery , Steven Bouillon , Alberto V Borges , Pierre Servais , Jean Pierre
6
Descy
1
2
Autonomous University of Barcelona, Spain, Université Libre de Bruxelles, Belgium,
3
4
5
University of Southern Denmark, Denmark, Université de Liège, Belgium, Katholieke
6
Universiteit Leuven, Belgium, Facultés Universitaires Notre-Dame de la Paix, University of
Namur, Belgium
025B
Emergent macrophytes alter the composition of the archaeal community in freshwater
and saline wetlands
1
2
2
2
2
Marc Lliros* , Rosalia Trias , Olaya Ruiz-Rueda , Carles Borrego , Lluis Bañeras
1
2
Autonomous University of Barcelona, Spain, University of Girona / Molecular Microbial
Ecology Group, Institute of Aquatic Ecology, Spain
026B
Inter-domain horizontal gene transfer, a major role in the adaptation of archaea to
mesophilic lifestyles?
1
2
3
2
Purificacion Lopez-Garcia* , Philippe Deschamps , Yvan Zivanovic , David Moreira
1
2
3
CNRS & University Paris-Sud, France, ESE, CNRS & University Paris-Sud, France, IGM,
CNRS & University Paris-Sud, France
027B
Archaeal abundance and diversity in tidal flats, Northern Arabian Gulf
Huda Mahmoud, Anwar Al-Qattan*
Kuwait University, Kuwait
028B
Archaea in canopy wetlands
Guntars Martinson*, Franziska Brandt, Ralph Conrad
Max Planck Institute for Terrestrial Microbiology, Germany
65
PS11 – Archaea: Important players in diverse microbial ecosystems
Tuesday 21 August
029B
Photoinhibition of archaeal and bacterial ammonia-oxidizers: insights from laboratory
cultures and natural stream biofilms
1
1
2
3
Stephanie N Merbt* , Jean-Christophe Auguet , Dave A. Stahl , Greame W. Nicol , Jim I.
3
1
1
Prosser , Eugenia Martí , Emilio O. Casamayor
1
2
3
Ceab.CSIC, Spain, University of Washington, United States, University of
Aberdeen, Scotland
030B
Methanogenic diversity and activity in a high-temperature biodegraded oil field
Hanako Mochimaru*, Daisuke Mayumi, Hideyoshi Yoshioka, Susumu Sakata, Hideyuki
Tamaki, Yoichi Kamagata
National Institute of Advanced Industrial Science and Technology, Japan
031B
The uncultivated SM1 euryarchaeon- uncovering its mystery
Christine Moissl-Eichinger*, Alexander Probst
Institute for Microbiology and Archaea Center, University of Regensburg, Germany
032B
Archaeal ammonia oxidizers are the predominant players along the salinity gradient of
the evaporitic high-altitude wetland, Salar de Huasco - Chile
1
2
2
3
2
Veronica Molina* , Cristina Dorador , Carolina Cubillos , Klaudia Hernández , Martha Hengst ,
4
5
6
Lasse Olsen , Laura Bristow , Camila Fernández
1
2
3
Universidad Andres Bello, Chile, Universidad de Antofagasta, Chile, Centro de
4
Investigación y Desarrollo de la Región de Los Lagos, Chile, Norweigan University of Science
5
6
and Technology, Norway, University of Southern Denmark, Denmark, CNRS UMR-7621
Banyuls-Sur-Mer, France
033B
Influence of Ammonium Concentration on amoA mRNA Levels of Ammonia-Oxidizing
Archaea within Sand of an Eelgrass Zone (Shimoda, Japan)
Tatsunori Nakagawa*, Yoshifumi Ando, Ryou Ishii, Reiji Takahashi
Nihon University, Japan
034B
Microbial assemblages linked to the methanecycle in Arctic thaw ponds
1
2
3
4
1
Karita Negandhi* , Connie Lovejoy , Michael J. Whiticar , Pierre E. Galand , Isabelle Laurion
1
Institut national de la recherche scientifique, Centre Eau Terre Environnement, Centre for
2
northern studies (CEN), Canada, Université Laval, , Institut de Biologie Intégrative et des
3
4
Systèmes, Canada, University of Victoria, Canada, Observatoire Océanologique de Banyuls,
UPMC-CNRS, Benthic Ecogeochemistry Laboratory (LECOB), France
035B
Abundances and diversity of ammonia-oxidizing microorganisms associated with
granular activated carbon in different full-scale drinking water purification plants in
Japan
Jia Niu*, Ikuro Kasuga, Futoshi Kurisu, Hiroaki Furumai
The University of Tokyo, Japan
036B
Comparative genomic analysis of the transport systems in Thaumarchaeota
1
1
1
2
1
Pierre Offre* , Anja Spang , Michaela Stieglmeier , Michael Wagner , Christa Schleper
1
2
University of Vienna / Department of Genetics in Ecology, Austria, University of Vienna /
Department of Microbial Ecology, Austria
037B
Determination of the Synergistic Acute Effects of Antibiotics on Acetoclastic
Methanogens
1
2
1
1
1
Gozde Ozbayram* , Bahar Ince , Sevcan Aydin , Zeynep Cetecioglu , Osman Arikan , Orhan
1
Ince
1
2
Istanbul Technical University, Turkey, Bogazici University, Turkey
66
PS11 – Archaea: Important players in diverse microbial ecosystems
Tuesday 21 August
038B
Metagenomic analysis of sedimentary ammonia-oxidizing archaea co-cultured with
sulfur-oxidizing bacteria
1
2
2
2
Soo-Je Park* , Rohit Ghai , Ana-Belen Martin-Cuadrado , Francisco Rodriguez-Valera , Sung1
Keun Rhee
1
2
Chungbuk National University, South Korea, Universidad Miguel Hernandez, Spain
039B
AmoA-based consensus phylogeny of ammonia-oxidizing archaea and deep
sequencing of amoA genes from soils of four different geographic regions
1
1
1
2
3
Michael Pester* , Thomas Rattei , Andreas Richter , Alexander Gröngröft , Jörg Overmann ,
4
1
1
Barbara Reinhold-Hurek , Alexander Loy , Michael Wagner
1
2
3
University of Vienna, Austria, University of Hamburg, Germany, DSMZ, Germany,
4
University of Bremen, Germany
040B
Novel methylotrophic methanogenic archaea implicated in reduced methane emissions
from bovine rumen
1
2
1
1
2
Morten Poulsen , Clarissa Schwab , Bent Borg Jensen , Ricarda M. Engberg , Anja Spang ,
1
2
3
1
2
Ole Højberg , Gabriel Milinovich , Andreas Schramm , Peter Lund , Tim Urich*
1
2
Aarhus University / Department of Animal Science, Denmark, University of Vienna
3
/Department of Genetics in Ecology, Austria, Aarhus University / Department of Bioscience,
Denmark
041B
Metagenomic analysis of an Archaea-dominated subsurface biofilm
1
2
1
Alexander Probst* , Thomas Rattei , Christine Moissl-Eichinger
1
2
University of Regensburg, Germany, University of Vienna, Austria
042B
Low-ammonia niche of ammonia-oxidizing archaea in a municipal wastewater treatment
plant
1
2
3
1
Laura Sauder* , Francien Peterse , Stefan Schouten , Josh D. Neufeld
1
2
3
University of Waterloo, Canada, ETH Zürich, Switzerland, NIOZ Royal Netherlands Institute
for Sea Research, Netherlands
043B
The genome of the ammonia-oxidizing archaeon Nitrososphaera gargensis reveals
unexpected metabolic versatility and unique adaptations to an extreme environment
1
2
1
3
4
Anja Spang* , Anja Poehlein , Pierre Offre , Sabine Zumbrägel , Susanne Haider , Elena V.
5
6
4
4
4
Lebedeva , Thomas Rattei , Christoph Böhm , Markus Schmid , Alexander Galushko , Rolf
2
1
3
3
4
Daniel , Christa Schleper , Eva Spieck , Wolfgang Streit , Michael Wagner
1
Department of Genetics in Ecology, University of Vienna, Althanstr. 14, 1090 Vienna, Austria,
2
Laboratorium für Genomanalyse, Universität Göttingen, 37077 Göttingen, Germany,
3
Biozentrum Klein Flottbek, Abteilung für Mikrobiologie und Biotechnologie, Universität
4
Hamburg, Ohnhorststrasse 18, 22609 Hamburg, Germany, Department of Microbial Ecology
5
University of Vienna Althanstr. 14, 1090 Vienna, Austria, Winogradsky Institute of
Microbiology, Russian Academy of Sciences, Prospect 60-let Oktyabrya 7/2, Moscow,
6
117312, Russia Department of Computational Systems Biology, University of Vienna,
Althanstr., 14, 1090, Austria
044B
Methane production in hydrolectric reservoirs: methanogenic activity potential in
brazilian river
1
1
Adriana Maria Torres Ballesteros* , Diego Armando Castillo Franco , Cristina Rossi
2
3
1
Nakayama , Artur Luiz da Costa da Silva , Vivian Helena Pellizari
1
2
Universidade de São Paulo, Brazil, Universidade Federal de São Paulo, Brazil,
3
Universidade Federal do Pará, Brazil
045B
Distribution of metabolically active Archaea in the Guaymas basin cold seep
sediments: evidence for anaerobic methanotrophic communities
Adrien Vigneron*, Cruaud Perrine, Pignet Patricia, Caprais Jean-Claude, Godfroy Anne, Toffin
Laurent
IFREMER, France
67
PS11 – Archaea: Important players in diverse microbial ecosystems
Tuesday 21 August
046B
Intact polar lipids and gene expression to trace archaeal populations in the
environment
1
2
2
2
3
Laura Villanueva* , Nicole Bale , Yvonne Lipsewers , Angela Pitcher , Laura Buckles , Johan
3
2
4
4
Weijers , Ellen Hopmans , Stefan Schouten , Jaap Sinninghe Damsté
1
2
Royal Netherlands Institute for Sea Research, Netherlands, Royal NIOZ, Netherlands,
3
4
University of Utrecht, Netherlands, Royal NIOZ/University of Utrecht, Netherlands
047B
Archaea: important dwellers in a dark, oligotrophic karst cave, central China
Hongmei Wang*
China University of Geosciences (Wuhan), China
048B
Revealing the physiology, function and evolution of important archaeal groups in deepsea ecosystems
Xiang Xiao*, Yu Zhang, Fengping Wang, Ying He, Jun Xu
Shanghai Jiao Tong University, China
049B
Systematic investigation on the environmental adaptation mechanism of the piezophilic
and hyperthermophilic archaean Pyrococcus yayanosii CH1
Jun Xu*, Xuegong Li, Xinwei Yang, Lupeng Liu, Ying He, Fengping Wang, Xiang Xiao
Shanghai JiaoTong University, China
PS12 – Genetic Potential and Expression: key functions in microbial communities
490B
Insights into the nutritional ecology of gut microbes operating in a wild carnivore
1
2
3
4
5
María Alcaide López* , Enzo Messina , Jörg Peplies , Miguel A. Simón , Guillermo López ,
6
7
Michail M. Yakimov , Manuel Ferrer
1
2
Consejo Superior de Investigaciones Científicas (CSIC), Spain, Institute for Coastal Marine
3
4
Environment (IAMC), Italy, Ribocon GmbH, Germany, Environmental Council of the Regional
5
6
Government of Andalusia, Spain, Egmasa-Consejería de Medio Ambiente, Spain, Institute
7
for Coastal Marine Environment (IAMC) - CNR, Ireland, CSIC, Institute of Catalysis, Spain
491B
Identification of novel glycoside hydrolases involved in lignocellulosic biomass
degradation from a sugarcane field soil metagenome
1
1
1
Thabata Maria Alvarez* , Douglas Antônio Alvaredo Paixão , João Paulo Franco Cairo ,
1
1
1
2
1
Fernanda Buchli , Isabela de Oliveira Pereira , Roberto Ruller , Rolf Prade , Fabio Squina
1
2
Brazilian Bioethanol Science and Technology Laboratory, Brazil, Oklahoma State
University, USA
492B
Dynamic genomic content and expression of H2 oxidation genes in ubiquitous sulphuroxidizing bacteria in the deep sea
1
2
1
1
Karthik Anantharaman* , John Breier , Cody Sheik , Gregory Dick
1
2
University of Michigan, Ann Arbor, United States, Woods Hole Oceanographic
Institution, United States
493B
Changes in the Vibrio harveyi outer membrane subproteome and transcriptome during
adaptation to cold seawater
1
1
1
1
1
Inés Arana* , Maite Orruño , Idoia Garaizabal , Claudia Parada , Itxaso Montánchez ,
2
1
Vladimir Kaberdin , Isabel Barcina
1
2
Universidad del País Vasco (UPV/EHU), Spain, Universidad del País Vasco (UPV/EHU) and
Ikerbasque (Basque Foundation for Science), Spain
68
PS12 – Genetic Potential and Expression
Tuesday 21 August
494B
Bacterial laccases: from bioinformatics to function
Luka Ausec*, Miha Črnigoj, Levin Pal, Vesna Jerman, Ines Mandic-Mulec
University of Ljubljana, Biotechnical Faculty, Department of Food Science and Technology,
Slovenia
495B
Genomic investigation of the ecological functioning of bacterial chitinases
Yani Bai*, Eiko Kuramae, Wietse de Boer, Hans van Veen
NIOO-KNAW, Netherlands
496B
Bacterial response to antibiotics in experimental wetlands: fate of antibiotics,
abundance and expression of resistance genes
1
2
2
1
Björn Berglund* , Ghazanfar Ali Khan , Jerker Fick , Per-Eric Lindgren
1
2
Linköping University, Sweden, Umeå University, Sweden
497B
Investigation of a metagenomic library for aerobic toluene degradation genes
1
2
3
1
Emna Bouhajja* , George Isabelle , Mark R. Liles , Spirodon Agathos
1
2
3
Earth and Life Institute, Belgium, Université Libre de Bruxelles, Belgium, Auburn
University, United States
498B
Analysis of the microbial nitrogen cycle in the Okavango basin of southern Africa for
sustainable land use management
Claudia Sofía Burbano*, Jann Lasse Grönemeyer, Thomas Hurek, Barbara Reinhold-Hurek
Department of Microbe-Plant Interactions, University of Bremen, Germany
499B
Fungal peroxidases and soil organic matter decomposition: are ectomycorrhizal
Cortinarius species the key players?
1
1
2
1
1
Inga Bödeker* , Karina Clemmensen , Wietse deBoer , Åke Olson , Björn Lindahl
1
Swedish University of Agricultural Sciences/Department of Forest Mycology and Plant
2
Pathology, Sweden, NIOO-KNAW/Microbial Ecology, Netherlands
500B
Function based screening of CO2 reducing enzymes by using metagenomic libraries
from hydrothermal deep-sea systems
Stefanie Böhnke*, Mirjam Perner
University of Hamburg, Germany
501B
Microbial ecology of Antarctic aquatic ecosystems determined using metagenomics
and metaproteomics
Ricardo Cavicchioli*, Federico M. Lauro, Matthew Z. DeMaere, Timothy Williams J., Mark V.
Brown, Sheree Yau, David Wilkins
The University of New South Wales, Australia
502B
Antibiotic resistance in sedimentary denitrifying communities
1
1
1
1
2
Thibaut Cazier* , Chen Yan , Roose-Amsaleg Celine , Josette Garnier , Fabienne Petit ,
2
1
Thierry Berthe , Anniet Laverman
1
2
UMR 7619 Sisyphe, University Pierre et Marie Curie/CNRS, France, UMR 6143 M2C,
Université de Rouen, France
503B
Chronic effect of sulfamethoxazole on methanogenic pathway
1
2
1
1
Zeynep Cetecioglu* , Bahar Ince , Derin Orhon , Orhan Ince
1
2
Istanbul Technical University, Turkey, Bogazici University, Turkey
504B
Strategies for screening metagenomic libraries in multiple surrogate hosts
Trevor Charles*, Jiujun Cheng, Kathy Lam, Katja Engel, Tanya Romantsov, Josh Neufeld
University of Waterloo, Canada
69
PS12 – Genetic Potential and Expression
Tuesday 21 August
505B
Deciphering Functional Microbial Communities: From Community Omics to Single
Organism Physiology
Ludmila Chistoserdova*, Marina Kalyuzhnaya, Alexey Vorobev, David Beck, Ildar
Mustakhimov, Janet Matsen, Nicole Smalley, Usanisa Setboonsarng, Mary Lidstrom
University of Washington, United States
506B
Gene expression and preservative efficacy studies of five lux-based E.coli biosensor
strains using novel bioluminescent method
Melissa Choong*, David Naseby
University of Hertfordshire, United Kingdom
507B
Responses of bacterial and archaeal ammonia oxidizers to copper stress in fluvo-aquic
soil
Jiulan Dai, Hua Liu, Xuekun Li*, Tianlin Shen, Lianxin Zhu, Renqing Wang
Shandong University, China
508B
Complete genome sequence of Methylocystis sp. strain SC2 and a comparative study
among methanotroph genomes
Bomba Dam, Somasri Dam, Werner Liesack*
MPI for Terrestrial Microbiology, Germany
509B
Transcriptomic landscape of the coral holobiont in White Plague Disease
Camille Daniels*, Manuel Aranda, Cornelia Roder, Chatchanit Arif, Christian Voolstra
King Abdullah University of Science and Technology (KAUST), Saudi Arabia
510B
Sequencing the active soil metagenome for assessing soil microbial functions using an
integrated "Omics" approach
1
2
3
3
4
Maude M. David* , Emmanuel Prestat , Lydia Zeglin , Peter Bottomley , Robert Hettich , Ari
2
2
4
5
5
Jumpponen , Charles Rice , Manesh Shah , Susannah Tringe , Tijana Glavina del Rio ,
4
3
1
Nathan Verberkmoes , David Myrold , Janet K. Jansson
1
2
3
Lawrence Berkeley National Laboratory, USA, Kansas State University, USA, Oregon State
4
5
University, USA, Oak Ridge National Laboratory, United States, Joint Genome Institute, USA
511B
Nitrogen fixation by symbiotic and biofilm-forming chemoautotrophs in dark, sulfidic
caves
Mahesh S Desai*, Karoline Assig, Sharmishtha Dattagupta
University of Göttingen, Germany
512B
Characterization of a new biosurfactant produced by a microorganism isolated from
hydrocarbon-contaminated mangrove sediments
1
2
3
4
Daniela Domingos* , Bruna Dellagnezze , Suzan Vasconcellos , Itamar Melo , Valéria
2
Oliveira
1
2
Campinas State University , Brazil, Campinas State University - UNICAMP / Division of
3
4
Microbial Resources, Brazil, São Paulo Federal University - Unifesp, Brazil, Brazilian
Company of Agricultural Research - EMBRAPA, Brazil
513B
Metatranscriptome of the methanotrophic community in lake sediment obtained using
RNA stable isotope probing
1
1
2
Marc Dumont* , Bianca Pommerenke , Peter Casper
1
2
Max Planck Institute for Terrestrial Microbiology, Germany, Leibniz-Institute of Freshwater
Ecology and Inland Fisheries, Germany
514B
Comparative analysis of functional diversity along nutrient gradients in freshwater
lakes and a comparison with marine environments
1
1
1
1
Alexander Eiler* , Katarzyna Zaremba , Siv GE Andersson , Stefan Bertilsson , Katherine D
2
3
McMahon , Ramunas Stepanauskas
1
2
3
Uppsala University, Sweden, University of Wisconsin, USA, Bigelow Laboratory for Ocean
Sciences, USA
70
PS12 – Genetic Potential and Expression
Tuesday 21 August
515B
The integrase of Vibrio rotiferianus DAT722 is required for defence against protozoan
grazing
1
2
1
2
1
Martina Erken , Rita Rapa , Peter D. Steinberg , Maurizio Labbate , Diane McDougald*
1
2
University of New South Wales, Australia, University of Technology Sydney, Australia
516B
Active nitrogen fixing heterotrophic bacteria at and below the oxic-anoxic interface in
the Baltic Sea
1
2
3
4
Hanna Farnelid* , Mikkel Bentzon-Tilia , Anders F. Andersson , Stefan Bertilsson , Günter
5
5
5
2
Jost , Matthias Labrenz , Klaus Jürgens , Lasse Riemann
1
2
3
Linnaeus University, Sweden, University of Copenhagen, Denmark, KTH Royal Institute of
4
5
Technology, Sweden, Uppsala University, Sweden, Leibniz Institute for Baltic Sea Research,
Germany
517B
Phylogenetic and functional analysis of a lignocellulose-degrading bacterial enrichment
culture
Babu Fathepure*, Madhu Prabhakaran, Brian Couger, Patricia Canaan, Rolf Prade
Oklahoma State University, United States
518B
Quantification of amoA transcriptional activity from bacterial and archaeal nitrificants in
response to pesticide treatment
1
1
1
2
Louise Feld* , Morten Schostag Nielsen , Anders Risbjerg Johnsen , Regin Rønn , Carsten
1
Suhr Jacobsen
1
2
Geological survey of Denmark and Greenland, Denmark, University of
Copenhagen, Denmark
519B
Mining the rumen microbiome for new lignocellulolytic bioactivities - a phage display
approach
1
2
3
3
3
Dragana Gagic* , Ciric Milica , Christina Moon , Graeme Attwood , Sinead Leahy , Chris
4
5
Creevey , Jasna Rakonjac
1
2
AgResearch Limited, Grasslands Research Centre, New Zealand, Massey University/
3
AgResearch Ltd, Grasslands Research Centre, New Zealand, AgResearch Ltd, Grasslands
4
Research Centre, New Zealand, Teagasc, Animal & Grassland Research and Innovation
5
Centre, Ireland, Massey University, Institute of Molecular BioSciences, New Zealand
520B
Fast adaptive response of sediment microbial communities to an oil input
Marisol Goni Urriza*, Sandrine Païssé, Thibault Stalder, Alicia Courtiès, Robert Duran
Equipe Environnement et Microbiologie EEM-IPREM UMR 5254, Université de Pau et des
Pays de l’Adour, France
521B
Quantitative Detection of pcrA gene in Perchlorate Degradation with Different Actived
Sludge System
Xiangyu Guan*, Yuxuan Xie, Fei Liu
China University of Geoscience, China
522B
Diversity and functional capability of free-living N fixing bacteria in Southern Australian
soils
Vadakattu Gupta*
CSIRO Ecosystem Sciences, Australia
523B
Culturability and ecophysiology of marine microorganisms associated with a
phytoplankton bloom
Richard Hahnke*, Alexander Mann, Hanno Teeling, Christin Bennke, Bernhard Fuchs, Rudolf
Amann, Jens Harder
Max Planck Institute for Marine Microbiology, Germany
71
PS12 – Genetic Potential and Expression
Tuesday 21 August
524B
Deep branching monooxygenases in methanotrophic bacteria: function and diversity
Stephanie Hainbuch*, Claudia Lüke, Peter Frenzel
MPI for terrestrial Microbiology, Germany
525B
Analysis of the amino acid residues in dockerin modules responsible for selective
cohesin-dockerin interaction from Clostridium cellulovorans
Sung Ok Han*, Sang Duck Jeon, Ji Eun Lee, Su Jung Kim, Ji Eun Joo
Korea University, South Korea
526B
In situ visualization and targeted identification of de novo synthesized proteins in
uncultured microbes
1
1
1
1
Roland Hatzenpichler* , Elizabeth Trembath-Reichert , Brett Babin , John Bagert , Karuna
2
1
2
1
1
Chourey , Grayson Chadwick , Robert Hettich , David Tirrell , Victoria Orphan
1
2
California Institute of Technology, USA, Oak Ridge National Laboratories, USA
527B
Genetic properties and antibiotic resistance of Campylobacter jejuni isolates from
diarrhea patients
Eun Seon Hur*, Po Hyun Park, Jong Hwa Kim, Jong Sung Son, Hee Jeong Yun, Yea Eun
Lee, Yun Sook Choi, Mi Hye Yoon, Jong Bok Lee
Gyeonggi Institute of Health and Environment, South Korea
528B
DNA sorption blocker "G2" increase DNA recovery from subsoil clay sediment >1.000
times
1
2
Carsten Suhr Jacobsen , Jacob Bælum*
1
2
Geological Survey of Denmark and Greenland, Denmark, DTU, Novo-Nordisk Foundation
Center for Biosustainability, Denmark
529B
Functional and taxonomic drivers of metagenome partitioning by substrate type
1
1
2
2
Thomas Jeffries* , Justin Seymour , Kelly Newton , Jim Mitchell
1
2
University of Technology Sydney, Australia, Flinders University, Australia
530B
Analysis of the amino acid residues in dockerin modules responsible for selective
cohesin-dockerin interaction from Clostridium cellulovorans
Sangduck Jeon, Ji Eun Lee, Su Jung Kim, Ji Eun Joo, Sung Ok Han*
Korea university, South Korea
531B
Cellobiose-consuming microbes as a key to explaining variation of anaerobic end
products in peatlands
1
2
1
3
Heli Juottonen* , Eeva-Stiina Tuittila , Kim Yrjälä , Hannu Fritze
1
2
3
University of Helsinki, Finland, University of Eastern Finland, Finland, Finnish Forest
Research Institute, Finland
532B
Quantification of resistance genes for last resort antibiotics from wastewater treatment
plants
Antti Karkman*, Susanna Pussila, Marko Virta
University of Helsinki, Finland
533B
Insight into norfloxacin resistance of Acinetobacter oleivorans DR1: target gene
mutation, persister and RNA-seq analyses
Jisun Kim*, Hoon Jung, Jaemin Noh, Woojun Park
Korea University, South Korea
72
PS12 – Genetic Potential and Expression
Tuesday 21 August
534B
Fungal assimilatory nitrate reductases in agricultural soils
1
2
3
4
Sylvia Klaubauf* , Markus Gorfer , Marzena Blumhoff , Alexander Urban , Erich
5
6
6
6
5
Inselsbacher , Dragana Bandian , Birgit Mitter , Angela Sessitsch , Wolfgang Wanek , Joseph
2
Strauss
1
2
CBS-KNAW Fungal Biodiversity Centre, Netherlands, Fungal Genetics and Genomics Unit
3
and University of Natural Resources and Life Sciences, Austria, University of Natural
4
Resources and Life Sciences, Austria, Department of Systematic and Evolutionary Botany,
5
Faculty Center for Biodiversity, University of Vienna, Austria, Department of Chemical
Ecology and Ecosystem Research, Faculty Center for Ecology, University of
6
Vienna, Austria, Fungal Genetics and Genomics Unit, Bioresources Unit, AIT- Austrian
Institute of Technology GmbH, Austria
535B
Functional diversity in saline and hypersaline marine and freshwater environments
1
1
1
1
2
Alvaro Lafraya* , Mónica Martínez , María Alcalde , Rafael Bargiela , Tatyana N. Chernikova ,
3
2
3
2
Violetta LaCono , Olga V. Golyshina , Michail M. Yakimov , Peter N. Golyshin , Manuel
1
Ferrer
1
2
CSIC, Institute of Catalysis, Spain, School of Biological Sciences, Bangor University, Wales,
3
Institute for Coastal Marine Environment (IAMC), Italy
536B
From phylogeography to genetic determinism - attempts to link geographical origin of
cowpea Bradyrhizobium populations with pedo-eco-climatic parameters and genetic
potential
1
2
3
4
1
Antoine Le Quéré* , Marc Neyra , Jean-Paul Ambrosi , Diégane Diouf , Ibrahima Ndoye ,
1
1
Elisabeth Navarro , Tatiana Krasova-Wade
1
Institut de Recherche pour le
2
3
4
Développement, France, Irstea, France, CNRS, France, Université Cheikh Anta
Diop, Senegal
537B
Amino acid substitutions in naphthalene dioxygenase from Pseudomonas sp. strain
NCIB 9816-4 result in regio- and stereo-specific hydroxylation of flavanone and
isoflavanone
1
1
2
3
4
Hyunji Lee* , Jiyoung Seo , Jaehong Han , Joong-Hoon Ahn , Michael J. Sadowsky ,
3
1
Youhoon Chong , Hor-Gil Hur
1
2
Gwangju Institute of Science & Technology (GIST), South Korea, Department of
3
Biotechnology, Chung-Ang University, South Korea, Department of Bioscience and
Biotechnology, and Bio/Molecular Informatics Center, Konkuk University, South Korea,
4
Department of Soil, Water, and Climate; and BioTechnology Institute, University of
Minnesota, USA
538B
Effect of specific epm gene mutations on mature biofilm formation by Pseudomonas
alkylphenolia
Kyoung Lee*, Keun Soo Kim, Jin Il Sung
Changwon National University, South Korea
539B
Quantification and high-throughput sequencing of denitrification genes and transcripts
from soils reveal active groups of denitrifiers and contribute to the understanding of
high N2O emissions from low pH soils
Binbin Liu*, Lars Bakken, Åsa Frostegård
Norwegian University of Life Sciences, Norway
540B
Shotgun sequencing of metatranscriptomes to analyze complex functional
communities involved in waste valorization bioprocesses
1
2
3
3
Gregory Marandat* , Hugues Carlei , Sebastien Lacroix , Anne-Sophie Lepeuple , Jean4
4
Jacques Pernelle , Theodore Bouchez
1
2
AgroParisTech / IRSTEA-ANRT-VERI, France, AgroParisTech / IRSTEA-ADEME-VERI,
3
4
France, VERI, France, IRSTEA, France
73
PS12 – Genetic Potential and Expression
Tuesday 21 August
541B
Identification of new microbial enzymes from forest and marine ecosystems by a
metagenomic approach
Martin Marjolaine*, Vandenbol Micheline
Gembloux Agro-Bio Tech, University of Liege, Belgium
542B
Life on human surfaces: skin metagenomics
1
2
2
3
3
Alban Mathieu* , Tom C. Delmont , Timothy M. Vogel , Patrick Robe , Renaud Nalin , Pascal
2
Simonet
1
2
Environmental Microbial Genomics, Université de Lyon, France, Ecole Centrale of Lyon,
3
France, LibraGen, France
543B
Diversification within major lineages of freshwater bacteria revealed by single cell
comparative genomics and time-series metagenomics
1
1
1
2
Katherine McMahon* , Benjamin Crary , Trevor Ghylin , Leong-Keat Chan , Ramunas
3
2
4
4
Stepanauskas , Rex Malmstrom , Stefan Bertilsson , Siv Andersson
1
2
3
University of Wisconsin Madison, USA, DOE Joint Genome Institute, USA, Bigelow
4
Laboratory for Ocean Sciences, USA, Uppsala University, Sweden
544B
Detection of halometabolite producers in sponge-associated bacteria by a genetic
approach
Mohd Azrul Naim Mohamad*, Shaonan Zhou, Anne van Zon, Hauke Smidt, Sipkema Detmer
Wageningen University, Netherlands
545B
Deducing the role of reductive dehalogenase enzymes in mixed microbial cultures used
for bioremediation of 1,1,2,2-terachloroethane
Olivia Molenda*, Laura Hug, Marie Manchester
University of Toronto, Canada
546B
What About High Andean Forest Soils? Taxonomic and functional assignment of
cloned sequences fron a metagenome
Jose Salvador Montana Lara*, Diego Javier Jimenez Avella, Monica Hernandez, Tatiana
Angel, Sandra Baena Garzon
Pontificia Universidad Javeriana, Colombia
547B
Rapid turnover and high variability of functional gene and transcript abundance in soils
1
2
Sergio Morales* , William Holben
1
2
University of Otago, New Zealand, University of Montana, United States
548B
Assessing the gastrointestinal microbiome through metatranscriptomics in a large
prospective cohort
1
1
1
2
2
Xochitl Morgan* , Nicola Segata , Joshua Reyes , Ashlee Earl , Georgia Giannoukos , Dawn
2
3
1
4
4
Ciulla , Jacques Izard , Wendy Garrett , Matthew Boylan , Andrew Chan , Curtis
1
Huttenhower
1
2
3
Harvard School of Public Health, USA, The Broad Institute, USA, The Forsythe Institute,
4
USA, Harvard Medical School, USA
549B
A putative cognate long chain flavodoxin protects Pseudomonas aeruginosa from
oxidative stress and plays an antimutator role
1
1
1
2
2
Alejandro Moyano , Yanina Rizzi , Romina Tobares , Adriana Krapp , Néstor Carrillo , Andrea
1
Smania*
1
CIQUIBIC-CONICET, Departamento de Química Biológica, Facultad de Ciencias Químicas,
2
Universidad Nacional de Córdoba, Argentina, IBR-CONICET, Facultad de Ciencias
Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, Argentina
550B
Linking mixed microbial community phenotype to individual genotypes
1
2
1
1
1
Emilie Muller* , Nicolás Pinel , Patrick May , Hugo Roume , Paul Wilmes
1
2
LCSB / University of Luxembourg, Luxembourg, Institute for Systems Biology, United States
74
PS12 – Genetic Potential and Expression
Tuesday 21 August
551B
Growth and transcriptomic analysis of inorganic sulphur oxidation in the heterotrophic
marine Roseobacter sp. MED193
Sarala Devi Muthusamy*, Federico Baltar, Jarone Pinhassi
Linnaeus University, Sweden
552B
Insights in the proteomics of triclosan degrading isolate Sphingopyxis sp. from
activated sludge
1
1
1
2
1
Jeppe Lund Nielsen* , Ihab Lolas , Henrik Kjeldal , Heidi Gough , Allan Stensballe
1
2
Aalborg University, Denmark, University of Washington, United States
553B
Genetic potential and expression dynamics during a pulsed-activity event (wet-up) in
desert biological soil crust
1
1
1
1
1
Ulisses Nunes da Rocha , Niels J. Klitgord* , Lara Rajeev , Julyan Fortney , Seth Axen ,
1
1
1
1
Nicholas J. Bouskill , Benjamin Bowen , Cheryl Kerfeld , Aindrila Mukhopadhyay , Ferran
2
1
1
Garcia-Pichel , Eoin L. Brodie , Trent R. Northen
1
2
Lawrence Berkeley National Laboratory, United States, Arizona State University, United
States
554B
Dissecting the functionality of the human microbiome: a "metaparental mating"
approach for the facile recovery of genetically competent bacteria from the human gut
1
1
2
1
Paraic O Cuiv* , Wendy Smith , Charmaine Chew , Mark Morrison
1
2
CSIRO Livestock Industries, Australia, University of Queensland, Australia
555B
Horizontally acquired genes in marine Synechococcus confer a selective advantage
during copper/oxidative stress
1
1
1
2
Brian Palenik* , Rhona Stuart , Bianca Brahamsha , Kayla Busby
1
2
University of California, San Diego-SIO, USA, University of California San Diego, USA
556B
ATP-dependent RecG helicase functions in bacterial transcription
Woojun Park*
Korea University, South Korea
557B
Responses of microbial functional groups to land use changes in Amazon Rainforest
soils
1
2
3
4
4
4
Fabiana Paula , Jorge Rodrigues , Rebecca Mueller , Liyou Wu , Tong Yuan , Ye Deng ,
4
3
5
6
1
Jizhong Zhou , Brendan Bohannan , Klaus Nusslein , James Tiedje , Vivian Pellizari*
1
2
Universidade de Sao Paulo/ Instituto Oceanografico, Brazil, University of Texas at Arlington/
3
4
Department of Biology, USA, University of Oregon/ Department of Biology, USA, University
5
of Oklahoma/ Institute for Environmental Genomics, USA, University of Massachusetts
6
Amherst/ Department of Microbiology, USA, Michigan State University/ Center for Microbial
Ecology, USA
558B
A revised RNA and DNA co-extraction protocol for quantification of microbial gene
expression from problematic soils and sediments
1
2
3
4
Mélanie M Paulin* , Mette H Nicolaisen , Carsten S Jacobsen , Anne Louise Gimsing , Jan
2
3
Sørensen , Jacob Bælum
1
2
Université de Moncton, Canada, Section of Genetics and Microbiology, Department of
3
Agriculture and Ecology, Faculty of Life Sciences, University of Copenhagen, Denmark, The
4
Geological Survey of Denmark and Greenland, Denmark, The Danish Environmental
protection agency, Denmark
559B
Nitrogen fixation in the unicellular chlorophyll d-containing cyanobacterium
Acaryochloris sp. HICR111A
1
1
1
2
1
Ulrike Pfreundt* , Remus Mohr , Björn Voß , Lucas J. Stal , Wolfgang R. Hess
1
2
Albert-Ludwigs-Universität Freiburg, Institute for Biology, Germany, Department of Marine
Microbiology, Netherlands Institute of Ecology NIOO-KNAW, Netherlands
75
PS12 – Genetic Potential and Expression
Tuesday 21 August
560B
Growth efficiency and genome content distinguish the ecological strategies of bacteria
Benjamin R. Roller*, Brian D. Klahn, Thomas M. Schmidt
Michigan State University, United States
561B
Effects of sediments, water, and land use patterns in shaping microbial community
composition and functioning in urban freshwater system
1
1
1
1
Gourvendu Saxena* , Sheela Reuben , Kalyan Chakravarthy Mynampati , Niyang Nyi Nyi ,
2
3
3
2
4
Yuting Liang , Daniela Drautz , Rohan Williams , Jizhong Zhou , Peter Steinberg , Staffan
3
5
6
7
1
Kjelleberg , Phanikumar Mantha , Stephan Schuster , Gary Andersen , Sanjay Swarup
1
2
3
National University of Singapore, Singapore, University of Oklahoma, USA, Nanyang
4
5
Technological University, Singapore, University of New South Wales, Australia, Michigan
6
7
State University, USA, Penn University, USA, Lawrence Berkeley National Laboratory, USA
562B
Novel organization of hydrocarbon degradation pathways genes revealed in microbial
community derived from Brazilian petroleum reservoirs through metagenomic analysis
1
1
2
Isabel Natalia Sierra García* , Javier Correa Alvarez , Suzan Pantaroto Vasconcellos ,
3
1
1
Eugenio Vaz Santos Neto , Anete Pereira de Souza , Valéria Maia de Oliveira
1
2
3
Campinas State University, Brazil, Federal University of Sao Paulo, Brazil, PETROBRAS
R&D Center, Brazil
563B
Genome sequence of Lactobacillus pentosus KCA1 reveals novel genes for vaginal
adaptation
1
2
2
1
Roland J. Siezen* , Jean M Macklaim , Gregory B Gloor , Jos Boekhorst , Sacha A.F.T. van
1
2
3
Hijum , Gregor Reid , Kingsley C. Anukam
1
Center for Molecular and Biomolecular Informatics, Radboud University Medical Centre,
2
Netherlands, Canadian Research&Development Centre for Probiotics, Lawson Health
3
Research Institute, Canada, Department of Medical Laboratory Sciences, College of Medical
Sciences, University of Benin, Nigeria
564B
Prospecting new metagenomic carbohydrases for second generation bioethanol
Elisângela Soares Gomes*, Gisele Regina Rodrigues, Eliana Gertrudes de Macedo Lemos
State University of São Paulo “Júlio de Mesquita Filho”, Jaboticabal Campus (FCAV), Brazil
565B
Cellulose expression by brown blotch-causing pseudomonads provides a fitness
advantage during colonisation of Agaricus bisporus mushroom caps and under waterlimiting conditions
Andrew Spiers*, Koza Anna
University of Abertay Dundee, United Kingdom
566B
Metatranscriptomic survey of a New Zealand geothermal spring identifies ecosystem
functionality
1
2
3
2
Matthew Stott* , Jeff Lyford , Xochitl Morgan , Maqsudal Alam
1
2
3
GNS Science, New Zealand, University of Hawaii at Manoa, United States, Harvard
University, United States
567B
Screening of clones from the soil of Caatinga as producers of cellulolytic enzymes
1
2
1
2
3
Mírian Sáber , Daniela Domingos* , Vanessa Kavamura , Valéria Oliveira , Itamar Melo
1
2
São Paulo University - USP / ESALQ, Brazil, Campinas State University - UNICAMP /
3
Division of Microbial Resources, Brazil, Brazilian Company of Agricultural Research EMBRAPA, Brazil
568B
Anaerobic biodegradation of aliphatic hydrocarbons by a methanogenic culture
enriched from oil sands tailings
Boonfei Tan*, Kathleen Semple, Julia Foght
University of Alberta, Canada
76
PS12 – Genetic Potential and Expression
Tuesday 21 August
569B
Evaluation of metatranscriptomic protocols and application to the study of planktonic
freshwater microbial communities
Despina Tsementzi*, Rachel Poretsky, Luis M Rodriguez-R, Alex Luo, Konstantinos
Konstantinidis
Georgia Institute of Technology, USA
570B
Transcriptome analysis of the ectomycorrhizal fungus Paxillus involutus provide
insights into the mechanisms of organic matter degradation
1
1
2
1
3
1
Anders Tunlid* , Francois Rineau , Doris Roth , Firoz Shah , Mark Smits , Tomas Johansson ,
1
4
5
2
Björn Canbäck , Peter Bjarke Olsen , Per Persson , Morten Nedergaard Grell , Erika
6
6
2
Lindquist , Igor V. Grigoriev , Lene Lange
1
2
Lund University, Department of Biology, Sweden, Aalborg University, Department of
3
Biotechnology and Chemistry, Denmark, Hasselt University, Centre for Environmental
4
5
Sciences, Belgium, Novozymes, Denmark, Umeå University, Department of Chemistry,
6
Sweden, Department of Energy, Joint Genome Institute, USA
571B
One-year monitoring of subfamily I.2.C catechol 2,3-dioxygenase gene expression and
microbial community dynamics in hypoxic, aromatic hydrocarbon contaminated
groundwater
1
1
1
1
1
András Táncsics* , Milán Farkas , Balázs Kovács , Sándor Szoboszlay , István Szabó ,
1
2
1
József Kukolya , Balázs Vajna , Balázs Kriszt
1
2
Szent István University, Hungary, Eötvös Loránd University, Hungary
572B
Comparison of three genes encoders lipoxygenases from Shewanella woodyi strain
DSM 12036
1
2
Silvana Pompeia Val-Moraes* , Eliamar Aparecida Nascimbém Pedrinho , Eliana Gertrudes
2
3
3
4
Macedo Lemos , Ignacio Fita , Xavi Carpena , Maria Angeles Manresa
1
2
Universidade Estadual Paulista, Brazil, Universidade Estadual Paulista (UNESP FCAV),
3
4
Brazil, Institute de Biologia Molecular (IBMB-CSIC), Espana, Universitat de Barcelona
(UB), Espana
573B
Methane oxidizing bacteria are adaptable to increasing ammonium load
David van der Ha, Dorien Gorteman, Adrian Ho*, Nico Boon
Laboratory of Microbial Ecology and Technology (LabMET), Belgium
574B
Functional screening of the Zenne river: discovery of a new β-lactamase
1
2
1
Ken Vercammen* , Tamara Garcia-Armisen , Pierre Cornelis
1
2
Vrije Universiteit Brussel, Belgium, ULB, Belgium
575B
Uncovering the diversity and structure of anaerobic hydrocarbon degrader
communities with enhanced assays for fumarate-adding enzymes
1
1
2
3
Frederick von Netzer* , Giovanni Pilloni , Friederike Gründger , Sara Kleindienst , Martin
2
3
1
Krüger , Katrin Knittel , Tillmann Lueders
1
2
Helmholtz Zentrum München, Institute of Groundwater Ecology, Germany, Federal Institute
3
for Geosciences and Natural Resources, Geomicrobiology, Germany, Max-Planck-Institute
for Marine Microbiology, Dept. Molecular Ecology, Germany
576B
Distribution of a sulfur oxidizing bacterium Sulfuricella denitrificans and proteomic
insights into cold adaptation
Tomohiro Watanabe*, Hisaya Kojima, Manabu Fukui
The Institute of Low temperature Science, Hokkaido University, Japan
577B
Effect of antibiotic use in dairy production on antibiotic resistance levels and microbial
communities in manure
1
2
1
Fabienne Wichmann* , Sheila Andrew , Jo Handelsman
1
2
Yale University, USA, University of Connecticut, USA
77
PS12 – Genetic Potential and Expression
Tuesday 21 August
578B
Community proteomic analysis of syntrophic terephthalate-degrading biofilm using two
dimensional HPLC-high resolution mass spectrometry
Jer-Horng Wu*, Feng-Yau Wu, Yun-Chiao Chou, Shu-Hui Chen, Hung-Jen Huang
National Cheng Kung University, Taiwan
579B
Interactive effects of clipping and warming on functional genes of soil microbial
communities involved in carbon and nitrogen cycles in a tallgrass prairie
1
1
1
1
1
1
2
Kai Xue* , Jianping Xie , Ye Deng , Liyou Wu , Zhili He , Joy Nostrand , Yiqi Luo , Jizhong
1
Zhou
1
2
Institue for environmental genomics, United States, University of Oklahoma, United States
580B
Impacts of CO2 concentration, N deposition and plant diversity on soil microbial
community
1
1
1
1
1
2
2
Kai Xue* , Zhili He , Liyou Wu , Ye Deng , Joy Nostrand , Sarah Hobbie , Peter Reich ,
1
Jizhong Zhou
1
2
Institue for environmental genomics, United States, University of Minnesota, United States
581B
Cloning of specific genes involved in the biodegradation of aromatic compounds
through classical and innovative metagenomic approaches
1
1
1
1
1
Jun Yuan* , Laure Franqueville , Samuel Jacquiod , Nathalie Lombard , Tom Delmont ,
2
3
4
1
Xiaojun Zhang , Laurent Philippot , Jean-Claude Lazzaroni , Pascal Simonet
1
2
3
Ecole Centrale de Lyon, France, Shanghai JiaoTong University, China, INRA/University of
4
Burgundy, France, Université de Lyon, France
582B
DNA-SIP to characterize microbial community involved in toluene degradation in oil
sand tailings enrichment cultures
Saima Zamir, Julia Foght, Tariq Siddique*
University of Alberta, Canada
583B
Competitive gene regulation model for XylR/DmpR regulator of the NtrC family
Dayi Zhang*, Wei E. Huang
The University of Sheffield, United Kingdom
584B
Feedback mechanisms of carbon-cycle to climate warming mediated by microbes
1
1
1
1
1
1
1
Jizhong Zhou* , Kai Xue , Jianping Xie , Ye Deng , Liyou Wu , Zhili He , Joy Nosstrand , Yiqi
2
Luo
1
2
Institute for environmental genomics, United States, University of Oklahoma, United States
PS13 – Managing Microbial Communities
386B
Enrichment culture of bacteria to cleanup perchlorate-contaminated alluvial aquifer in
estuary
Yeonghee Ahn*, Tae-hee Kim
Dong-A Univ., South Korea
387B
Investigation of bacteria from composting of "Fundação Parque Zoológicode São
Paulo", using octanoic acid as carbon source for produce PHAmcl
Vitor B. Ferrari, Leonardo Jun Otuayama, Bruna N. Buscariollo*, Marília Tâmisa Araújo
Quintino, Alyne Marrem, Maria Aparecida Juliano, Luiz Juliano Neto, Patrícia Locosque
Ramos, Suzan Pantaroto Vasconcellos, Rafael C. S. Rocha
Federal University of São Paulo - UNIFESP, Brazil
78
PS13 – Managing Microbial Communities
Tuesday 21 August
388B
The impact of solid retention time on bacterial community diversity in laboratory-scale
sequencing batch reactors: revealed by 16S rDNA amplicon pyrosequencing
Samik Bagchi*, Berenice Garcia Tellez, Hari Anandarao, Pascal Saikaly
King Abdullah University of Science and Technology (KAUST), Saudi Arabia
390B
Metaproteomic and metagenomic characterisation of floccular and granular
phosphorus removal biofilms
1
2
3
4
5
Jeremy Barr* , Bas Dutilh , Andrew Cook , Toshikazu Fukushima , Marcus Hastie , Jeffery
5
6
6
3
3
Gorman , Chongle Pan , Robert Hettich , Gene Tyson , Philip Bond
1
2
San Diego State University, United States, Centre for Molecular and Biomolecular
Informatics, Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen
3
Medical Centre, Netherlands, The University of Queensland, Advanced Water Management
4
Centre (AWMC), Australia, Division of Environmental Engineering, Faculty of Engineering,
5
Japan, Protein Discovery Centre, Queensland Institute of Medical Research (QIMR),
6
Australia, Chemical Sciences Division, Oak Ridge National Laboratories, United States
391B
Acetoclastic methanogenesis in a microbial community associated with a subbituminous coal seam in NSW, Australia
Sabrina Beckmann*, John Webster, Torsten Thomas, Michael Manefield
University of New South Wales (UNSW), Australia
392B
Interactions between autochthonous microbial community and invading microbial
strains in biofilm
Micol Bellucci*, Kim Milferstedt, Renaud Escudié, Gaëlle Gévaudan, Nicolas Bernet, JeanJacques Godon, Jean-Philippe Steyer, Jérôme Harmand
INRA-Laboratoire de Biotechnologie de l'Environnement, France
393B
Efficient nitrifying bioreactors operated at extremely low dissolved oxygen
concentrations produce low N2O emissions
1
2
2
2
2
Micol Bellucci* , Tomoko Yamamoto , Shohei Riya , Shohei Mizuma , Ryo Kanai , Kohei
2
2
3
2
2
Kamimura , Keisuke Hojo , Thomas Peter Curtis , Masaaki Hosomi , Akihiko Terada
1
2
INRA-Laboratoire de Biotechnologie de l'Environnement, France, Tokyo University of
3
Agriculture and Technology, Japan, Newcastle University, United Kingdom
394B
Correlation of enterococci community structure to microbial and physico-chemical
parameters in surface water in the North West Province, South Africa
Carlos Bezuidenhout, Lesego Molale*
North-West University: Potchefstroom Campus, South Africa
395B
Anaerobic microbial community response to crude oil spill in the marsh sediments of
southeast Louisiana
Raj Boopathy*
Nicholls State University, United States
396B
Microbial population dynamics in groundwater and surrogate sediments during HRC
biostimulation for Cr(VI)-reduction
1
1
2
3
4
Kara Bowen De Leon* , B. D. Ramsay , D. R. Newcomer , B. Faybishenko , T. C. Hazen , M.
1
W. Fields
1
2
Montana State University, United States, Pacific Northwest National Laboratory, United
3
4
States, Lawrence Berkeley National Laboratory, United States, University of Tennessee/Oak
Ridge National Laboratory, United States
397B
Insights into the diversity of iron depositing biofilms in technical water systems
Burga Braun*, Josephin Schröder, Ulrich Szewzyk
Berlin University of Technology, Germany
®
79
PS13 – Managing Microbial Communities
Tuesday 21 August
398B
Similar organic micropollutants fate in anaerobic mesophilic digesters fed with the
same contaminated sludge but exhibiting different microbial populations and different
metabolisms
Florence Braun*, Jerome Hamelin, Anais Bonnafous, Jean-philippe Steyer, Dominique
Patureau
INRA, France
399B
Marine biofilm communities colonizing antifouling paints in the Mediterranean Sea
1
2
3
4
5
Jean-François Briand* , Mercedes Camps , Gérald Gregori , Agnès Bouchez , Aude Barani ,
4
2
2
Brigitte Le Berre , Christine Bressy , Yves Blache
1
2
3
MAPIEM - Universite Sud-Toulon Var, France, Universite Sud-Toulon Var, France, CNRS,
4
5
France, INRA, France, Aix-Marseille University, France
400B
Isolation and identification of microbial species native to an oil sands tailings pond and
capable of degrading oil sands process-affected water acid-extractable organics
Lisa Brown*, Elena Dlusskaya, Ania Ulrich
University of Alberta, Canada
401B
Seasonal variability of microorganisms in different sources and water storage areas in
the same town
M. Angeles Calvo*, Esteban Leonardo Arosemena, Judith Pérez, Laura Corbella, Alex
Rodríguez, Gisela Girmé, Eduard Grau, Jana Cantavella, Judit Fuentes, Montserrat Mora
Universidad Autónoma de Barcelona, Spain
402B
Selective enrichment of hydrocarbonoclastic bacteria producing storage compounds of
biotechnological relevance
1
2
2
2
2
Rita Castro* , Paulo Castro , Madalena Alves , Isabel Rocha , Maria Alcina Pereira
1
2
University of Minho, Portugal, University of Minho / Institute for Biotechnology and
Bioegineering, Portugal
403B
Microbial communities involved in the corrosion of concrete sewer infrastructure
1
2
2
1
Barry Cayford* , Paul Dennis , Gene Tyson , Phil Bond
1
2
Advanced Water Management Centre, The University of Queensland, Australia, Australian
Centre for Ecogenomics and Advanced Water Management Centre, The University of
Queensland, Australia
404B
Tracking the survival of bacteria exposed to monochloramine disinfection in drinking
water treated by a biologically active filter
Tara Clancy*, Tzu-Hsin Chiao, Ameet Pinto, Chuanwu Xi, Lutgarde Raskin
University of Michigan, United States
405B
Response of the bacteria community and the IncP1 mobilome to linuron in on farm
biopurification systems treating pesticide contaminated wastewater
1
1
1
2
2
Simone Dealtry* , Viola Weichelt , Holger Heuer , Vincent Dunon , Dirk Springael , Kornelia
1
Smalla
1
2
Julius Kühn-Institute, Germany, KU Leuven, Belgium
406B
Gut microbiota dominated by Enterobacter spp. in a morbidly obese patient
Na Fei*, Shuiming Xiao, Jian Shen, Xiaoyan Pang, Linghua Wang, Menghui Zhang, Xiaojun
Zhang, Liping Zhao
Shanghai Jiao Tong University, China
407B
Use of an aerobic selector to overcome filamentous bulking in activated sludge
Vânia Ferreira*, Catarina Martins, Maria Olívia Pereira, Ana Nicolau
University of Minho / IBB, Portugal
80
PS13 – Managing Microbial Communities
Tuesday 21 August
408B
Characterising the physical structure and microbial community structure of drinking
water biofilms
1
1
2
1
Katherine Fish* , Isabel Douterelo , A. Mark Osborn , Joby Boxall
1
2
The University of Sheffield, United Kingdom, The University of Hull, United Kingdom
409B
Study of encystment and resistance to disinfection treatments of Hartmannella, a freeliving amoebae
1
2
2
3
Emilie Fouque* , Marie-Cécile Trouilhé , Philippe Humeau , Philippe Hartemann , Vincent
4
5
Thomas , Yann Héchard
1
2
3
CSTB, France, Centre scientifique et technique du bâtiment, France, University of
4
5
Lorraine, France, STERIS R&D, France, University of Poitiers, France
410B
Impact of an inoculation step on the start-up phase of a novel MBBR autotrophic N
removal process
Gilberte Gaval*
Veolia Environment Research and Innovation, France
411B
Chloroflexi in methanogenic crude oil degrading systems
1
2
2
2
2
2
Russell Grant* , A. Sherry , C. M. Aitken , D. M. Jones , N. D. Gray , B. F. J Bowler , S. R.
3
2
Larter , I. M. Head
1
2
3
University of York, United Kingdom, Newcastle University, United Kingdom, University of
Calgary, Canada
412B
Use of microorganisms in sustainable water treatment for horticultural production: the
case of constructed wetlands
1
2
3
4
Nicolas Gruyer* , Martine Dorais , Gérald J. Zagury , Beatrix W. Alsanius
1
2
Agriculture and Agrifood Canada / Laval University, Canada, Agriculture and Agrifood,
3
Canada, Department of Civil, Geological and Mining Engineering, École Polytechnique de
4
Montréal, Canada, Swedish University of Agricultural Sciences, Department of Horticulture,
Microbial Horticulture Laboratory, Sweden
413B
Stability assessment of the microbial community in a wastewater treatment plant via
correlation analysis
1
1
1
2
Susanne Günther* , Christin Koch , Thomas Hübschmann , Isolde Röske , Roland Arno
1
2
1
1
Müller , Thomas Bley , Hauke Harms , Susann Müller
1
2
Helmhotz-Centre for Environmental Research, Germany, University of Technology, Germany
414B
Long-term preservation of key players of nitrogen and carbon cycles
1
1
2
3
2
Kim Heylen* , Sven Hoefman , Eva Spieck , Boran Kartal , Andreas Pommerening-Roeser ,
3
1
1
Katharina Ettwig , Bram Vekeman , Paul De Vos
1
2
3
Ghent University, Belgium, Hamburg University, Germany, Radboud
University, Netherlands
415B
Optimisation of total protein extraction and sample preparation for the metaproteomic
analysis of complex microbial communities by tandem mass spectrometry
Susan Hove Jensen*, Per Halkjær Nielsen, Allan Stensballe
Aalborg University, Denmark
416B
Effect of a hyperthermophilic pre-treatment on nitrous oxide emission - pattern and
population dynamics of nitrifying and denitrifying bacteria during composting of swine
waste
Wakako Ikeda-Ohtsubo*, Erika Shindo, Keisuke Miyauchi, Ginro Endo
Tohoku Gakuin University, Japan
417B
Managing microbial life by a novel bioreactor equipped with a microbubble generator
by an oscillating porous board
1
1
2
1
Tsukasa Ito* , Tomo Kubota , Seichin Kinuta , Kenji Amagai
1
2
Gunma University, Japan, Optnics Precision Co.,ltd., Japan
81
PS13 – Managing Microbial Communities
Tuesday 21 August
418B
Limitation of short solid retention time operation in an inclined plate membrane
bioreactor and effect on microbial community and activity
Suda Ittisupornrat*, Tomohiro Tobino, Kyoungjin An, Kazuo Yamamoto
The University of Tokyo, Japan
419B
Assessment of methods for measuring biocorrosion of carbon steel and comparison of
corrosion capabilities between two species Desulfovibrio
Crystal Johnson*, Heather Drilling, Bradley Stevenson, Paul Lawson
Department of Microbiology and Plant Biology and OU Biocorrosion Center, University of
Oklahoma, USA
420B
Large-scale production of a mixed culture of sulfate reducing bacteria for
bioremediation of acid mine drainage
Carl Johnston, Douglas Schell*, Daniel Lisko
Youngstown State University, USA
421B
Detection of aquatic Streptomyces by quantitative PCR for monitoring of taste-andodour episodes in water reservoirs
1
1
1
2
Niels O. G. Jorgensen* , Jeanette E. Lylloff , Maria H. Mogensen , Michele Burford , Louise
3
Schlüter
1
2
University of Copenhagen, Department of Agriculture & Ecology, Denmark, Australian
3
Riverine Institute, Griffith University, Australia, Carbon 14 Agency, DHI Group, Denmark
422B
Physico-chemical and microbiological monitoring of three biotrickling filters dedicated
for the treatment of hydrogen sulfide (H2S) and methyl mercaptan (CH3SH)
Marc Jovic*, Nathalie Brack, Cécile Rouillon, Isabelle Charron, Philippe Zozor, Christophe
Renner, Anne-Sophie Lepeuple
Veolia Environnement Recherche & Innovation, France
423B
Role of Hyphomicrobium-like bacteria associated with granular activated carbon filter
in drinking water purification process in the removal of assimilable organic carbon
Ikuro Kasuga*, Suwat Soonglerdsongpha, Yukihiro Osaka, Futoshi Kurisu, Hiroaki Furumai
The University of Tokyo, Japan
424B
Hydrolytic community development in low temperature anaerobic bioreactors treating
synthetic sewage
Ciara Keating*, Denise Cysneiros, Dermot Hughes, Therese Mahony, Vincent O'Flaherty
National University of Ireland, Galway, Ireland
425B
Quantitative proteomic analysis of ibuprofen-degrading Patulibacter sp. strain I11
1
2
1
1
2
Henrik Kjeldal* , Barbara Almeida , Ihab Lolas , Anders Dahl Knudsen , Gilda Carvalho , Kåre
1
2
1
Lehmann Nielsen , Maria Teresa Barreto Crespo , Jeppe Lund Nielsen
1
2
Aalborg University, Denmark, Instituto de Biologia Experimental e Tecnológica, Portugal
426B
Bacterial biofilm communities enhance the degradation of polychlorinated biphenyls
(PCBs) in sediment
1
1
1
1
2
Birthe Venoe Kjellerup* , Sarah Edwards , Chiara Draghi , Emily Balbier , Kevin Sowers
1
2
Goucher College, United States, University of Maryland Baltimore County, United States
427B
Impact of temperature variations on bacterial population involved in MBBR autotrophic
N-removal process
1
1
1
1
1
Sébastien Lacroix* , Gilberte Gaval , Régis Gagneux , Mickael Samspon , Estelle Gonidec ,
2
1
1
Romain LEMAIRE , Juan-Carlos Ochoa , Anne-Sophie LEPEUPLE
1
2
Veolia Environnement Research and Innovation, France, Veolia Water, France
82
PS13 – Managing Microbial Communities
Tuesday 21 August
428B
Molecular Characterization of PHA-Storing Microorganisms in Feast and Famine
Selection
Sébastien Lacroix, Aude Fourçans*, Elise Blanchet, Maria Albuquerque, Olivier Ropars,
Nathalie Brack, Cécile Rouillon, Nassima Bouabida, Dores Cirne, Anne-Sophie Lepeuple
Veolia Environnement Recherche et Innovation, France
429B
Biostimulation of pesticide degradation in groundwater aquifers with addition of
oxygen at different concentrations
Suzi Levi*, Pou L. Bjerg, Hans-Jørgen Albrechtsen
Technical University of Denmark, Environment, Denmark
430B
T-RFLP and Pyrosequencing Approach to Clarify Bacterial Groups that Affects
Dewaterability of Activated Sludge
Ning Li*, Hiroyasu Satoh, Takashi Mino
Department of Socio-cultural and Environmental Studies, Graduate School of Frontier
Sciences, The University of Tokyo, Japan
431B
Strategies for the management of surface microbial communities based on volatile
compounds and visible light
1
1
2
3
Stefan Liebminger* , Tomislav Cernava , Lisa Oberauner , Michael Fürnkranz , Massimiliano
3
3
Cardinale , Gabriele Berg
1
2
3
RCPE GmbH, Austria, ACIB GmbH, Austria, Graz, University of Technology / Institute of
Environmental Biotechnology, Austria
432B
Long-term microbial community dynamics in a full scale biogas plant
Rico Lucas*, Daniel Beyer, Anne Brandt
Helmholtz Centre for Environmental Research GmbH - UFZ, Germany
433B
The bacterial and archaeal demographics of farm wastes bioreactors
1
1
1
2
1
1
1
Terence Marsh* , F. Yang , R. Rossi , Z. Yue , R. Chen , J. M. MacLellan , W. Liao
1
2
Michigan State University, USA, Hefei University of Technology, China
434B
Synthetic ecosystem engineering for improved microbial consortia design
1
2
1
Michael Mee* , Harris Wang , George Church
1
2
Harvard Medical School, United States, Wyss Institute for Biologically Inspired Engineering,
USA
435B
Disturbances as lever for managing biofilm morphology and community structure
Kim Milferstedt*, Gaëlle Santa-Catalina, Renaud Escudié, Jean-Jacques Godon, Nicolas
Bernet
INRA-LBE, France
436B
How to choose the best inoculum for starting an anaerobic digester?
Kim Milferstedt*, Aline Sandré, Jérôme Hamelin, Jean-Jacques Godon
INRA-LBE, France
437B
Biopolymers productions by mixed aerobic cultures using crude glycerol as feedstock
Rita Moita Fidalgo*, Paulo Costa Lemos
Requimte, FCT/UNL, Portugal
83
PS13 – Managing Microbial Communities
Tuesday 21 August
438B
Distinct and complex microbial communities in water-phase and biofilms of a
wastewater bioreactor as revealed by barcoded 16S rRNA gene pyrosequencing
1
2
3
3
Jose A. Morillo-Perez* , Desiree Villahermosa , Juan M. González , Maximino Piñeiro-Vidal ,
2
4
5
5
Emilio García-Robledo , Sokratis Papaspyrou , Waleed A. Al-Soud , Søren J. Sørensen ,
1
6
2
Jesus González-López , Hauke Smidt , Alfonso Corzo
1
Water Research Institute, Department of Microbiology, University of Granada, Spain,
2
Department of Biology, Faculty of Marine and Environmental Sciences, University of Cadiz,
3
4
Spain, Institute for Natural Resources and Agrobiology, IRNAS-CSIC, Spain, Institute for
5
Marine Science of Andalusia, ICMAN-CSIC, Spain, Department of Biology, Unversity of
6
Copenhagen, Denmark, Laboratory of Microbiology, Wageningen University, Netherlands
439B
Architecture evolution of biomass aggregates in single stage nitritation/anammox
reactors
1
2
3
3
A. Gizem Mutlu* , Anna Katrine Vangsgaard , Marlene Mark Jensen , Barth F. Smets
1
2
Technical University of Denmark, Denmark, DTU Chemical and Biochemical Engineering,
3
Denmark, DTU Environmental Engineering, Denmark
440B
Monitoring the changes in marine aquaculture environment associated with the
emergence of antibiotic resistance genes
1
1
2
3
4
Windi Muziasari* , Äntti Karkman , Manu Tamminen , Satoshi Managaki , Ogo Mitsuko ,
4
1
Satoru Suzuki , Marko Virta
1
2
University of Helsinki, Finland, MIT, Massachusetts Institute of
3
4
Technology, USA, Yokohama National University, Japan, Ehime University, Japan
441B
Optimization of the attachment of bacteria on inert or biodegradable supports for
environmental applications
Vizma Nikolajeva*, Zaiga Petrina, Tatjana Griba, Katrina Potapova, Andrejs Berzins, Olga
Muter
University of Latvia, Latvia
442B
Evaluation of the microbial diversity in the São Paulo´s Zoo Park Foundation to obtain
polyhydroxyalkanoates
1
1
1
2
Bruna Nunes Buscariollo* , Vitor Ferrari , Leonardo Jun Otuyama , João Batista Cruz , José
3
1
1
1
G. C. Gomez , Suzan P. Vasconcellos , Patrícia L. Ramos , Luiz Juliano Neto , Rafael C. S.
1
Rocha
1
2
Federal University of São Paulo - UNIFESP, Brazil, São Paulo´s Zoo Park Foundation,
3
Brazil, University of São Paulo - USP, Brazil
443B
Comparative community genomics of San Juan basin coal beds
1
1
1
1
1
Antoine Pagé* , Young Song , Charles Howes , Eugene Kuatsjah , Nicole Sukdeo , Brad
2
3
1
Huizinga , Dariusz Strapoc , Steven Hallam
1
2
3
University of British Columbia, Canada, ConocoPhillips Corporation, USA, Dariusz
BioGeoChem LLC, USA
444B
Proteolytic screening of isolated microorganisms from the composting process
adopted at São Paulo Zoo Park Foundation
1
2
2
Suzan Pantaroto de Vasconcellos* , Marghuel A. Silveira , Rafael Costa Santos Rocha ,
2
3
2
2
Débora Okamoto , João Batista Cruz , Maria Helena S. Cezari , Luiz Juliano Neto ,
1
2
3
Federal University of São Paulo (UNIFESP), Brazil, UNIFESP, Brazil, São Paulo Zoo Park
Foundation, Brazil
445B
In-situ microbial activity in membrane-aerated biofilms performing autotrophic nitrogen
conversion
Carles Pellicer*, Carlos Domingo, Barth F. Smets
DTU Environment, Technical University of Denmark, Denmark
84
PS13 – Managing Microbial Communities
Tuesday 21 August
446B
Response of pig slurry sulphate-reducing community to additions of sulphate and
volatile fatty acids
Pascal Peu*, Anne-Marie Pourcher, Patrick Dabert
IRSTEA, France
447B
Enhanced natural attenuation of contaminated aquifers with iron oxide nanoparticles
1
1
2
1
3
Giovanni Pilloni* , Carolin Meyer , Armin Meyer , Julian Bosch , Sebastian Höss , Heinrich
2
1
1
Eisenmann , Rainer Meckenstock , Tillmann Lueders
1
2
3
Helmholtz Zentrum Munich, Germany, Isodetect GmbH, Germany, Ecossa, Germany
448B
Rpf protein from Tomitella biformata AHU 1821 increase the number of cultivable
bacteria from permafrost ice wedge
1
1
2
1
1
Indun Dewi Puspita* , Moe Uehara , Taiki Katayama , Michiko Tanaka , Wataru Kitagawa ,
3
1
1
Cindy H. Nakatsu , Yoichi Kamagata , Kozo Asano
1
2
Hokkaido University, Japan, National Institute of Advanced Industrial Science and
3
Technology, Japan, Purdue University, United States
449B
Evaluation of the lipolytic activity of isolated microorganisms arising from composting
process of the São Paulo Zoo
1
2
2
Patricia Locosque Ramos , Bruna Carolina Borim , Marghuel A. Silveira , Rafael Costa
2
2
3
2
Santos Rocha , Bruna Nunes Buscariollo , João Batista Cruz , Luiz Juliano Neto , Suzan
2
Pantaroto de Vasconcellos*
1
2
3
Universidade Federal de São Paulo, Brazil, Unifesp, Brazil, SPZFP, Brazil
450B
Functional microbial communities involved in glucose and xylose fermentation:
influence of pH
1
1
1
1
1
Charlotte Richard* , Thomas Labatut , Angeline Guenne , Celine Madigou , Laurent Mazeas ,
2
1
Marielle Bouix , Theodore Bouchez
1
2
Irstea, France, AgroParisTech, France
451B
Methanotrophic bacteria in oilsands tailings ponds of northern Alberta
Ali Saidi-Mehrabad, Zhiguo He, Ivica Tamas, Christine Sharp*, Allyson Brady, Peter Dunfield
University of Calgary, Canada
452B
Metaproteogenomic insights beyond bacterial response to naphthalene exposure and
bio-stimulation
1
2
1
3
4
3
Jana Seifert* , M.e. Guazzaroni , F.a. Herbst , I. Lores , J. Tamames , A.i. Peláez , M.
2
2
1
5
2
6
Alcaide , M.v. del Pozo , M. von Bergen , J.l.r. Gallego , R. Bargiela , D.h. Pieper , R.
7
3
2
Rosselló-Móra , J. Sánchez , M. Ferrer
1
2
UFZ-Helmholtz Center for Environmental Research, Germany, CSIC, Institute of Catalysis,
3
4
Spain, Facultad de Medicina, Universidad de Oviedo, Spain, CSIC, Centro Nacional de
5
Biotecnología, Spain, Área de Prospección e Investigación Minera, Universidad de
6
7
Oviedo, Spain, HZI-Helmholtz Center for Infection Disease, Germany, CSIC-UIB, Spain
453B
How immigration might alleviate the effects of an influenza pandemic: a freshwater
microbiology story
1
2
3
1
4
1
Andrew Singer* , Katja Lehmann , Thomas Bell , Michael Bowes , David Bass , Dawn Field
1
2
NERC - Centre for Ecology & Hydrology, United Kingdom, University of Oxford, United
3
4
Kingdom, Imperial College London, United Kingdom, Natural History Museum, United
Kingdom
454B
Bioremediation of petrolium contaminated soil
Dr. Padma Singh*, Richa Saini, Shreyasri Dutta
Gurukul Kangri University, India
T
85
PS13 – Managing Microbial Communities
Tuesday 21 August
455B
Microbiomics towards improved intestinal health and function in monogastric farm
animals
Hauke Smidt*
Wageningen University, Netherlands
456B
Variance calculations for quantitative real-time polymerase chain reaction experiments
with multiple levels of replication
1
1
2
1
Susana Soto Rojo* , Gary Glonek , Cecilia Demergasso , Patricia Solomon
1
2
The University of Adelaide, Australia, Universidad Catolica del Norte, Chile
457B
A novel direct rRNA quantitative detection method using molecular weight cut-off
membrane
1
2
1
1
Yasuyuki Takemura* , Yuji Sekiguchi , Hideki Harada , Kengo Kubota
1
2
Tohoku University, Japan, Advanced Industrial Science and Technology, Japan
458B
Egalitarianism in biofilms
Yu Tao*, Dawen Gao, Yuan Fu, Haoyu Wang
Harbin Institute of Technology, China
459B
A novel method to characterize biodegradable organic matter in reclaimed water using
bacterial growth fingerprint
Parinda Thayanukul*, Futoshi Kurisu, Ikuro Kasuga, Hiroaki Furumai
The University of Tokyo, Japan
460B
Seasonal variation of fecal indicators in a drinking water reservoir
1
1
1
2
1
Hsin-hsin Tung* , Chia-Chen Wu , Hao-Yu Lo , Yung-Hao Ching , Pei-Te Chiueh
1
2
National Taiwan University / Inst Environmental Engineering, Taiwan, Tzu Chi University,
Taiwan
461B
Impacts of Oxytetracycline on Performance of Thermophilic Anaerobic Manure
Digesters and Active Microbial Population
1
2
2
1
1
Gokhan Turker* , Orhan Ince , Fulya Suzen , Emine Ertekin , Bahar Ince
1
2
Bogazici University, Turkey, Istanbul Technical University, Turkey
462B
Biofilm based bioaugmentation strategies for the treatment of pesticide waste streams
Pieter Verhagen*, Leen De Gelder, Nico Boon
University College Ghent, Belgium
463B
Changes of gut microbiota associated with obesity, insulin resistance and inflammation
in high fat diet-fed mice
1
2
2
3
3
3
Jingjing Wang* , Hang Tang , Chenhong Zhang , Yufeng Zhao , Liping Zhao , Jian Shen
1
State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology,
2
Shanghai Jiao Tong University, China, Key Laboratory of MOE for Microbial metabolism and
3
School of Life Science & Biotechnology, Shanghai Jiao Tong University, China, Shanghai
Centre for Systems Biomedicine, Shanghai Jiao Tong University, China
464B
A gut microbiota-targeted, dietary intervention for amelioration of chronic inflammation
underlying metabolic syndrome
Shuiming Xiao*, Na Fei, Xiaoyan Pang, Jian Shen, Linghua Wang, Baorang Zhang, Menghui
Zhang, Xiaojun Zhang, Chenhong Zhang, Min Li, Zhengsheng Xue, Jingjing Wang, Jie Feng,
Jiaqi Liu, Wenmin Long, Liping Zhao
Shanghai Jiao Tong University, China
465B
Elucidating nitrous oxide formation pathways in a nitrifying bioreactor towards
nitrification: the effect of dissolved oxygen
1
1
1
1
1
Tomoko Yamamoto* , Keisuke Hojo , Micil Bellucci , Megumi Kuroiwa , Kazuo Isobe , Chie
2
1
1
2
1
1
Katsuyama , Sheng Zhou , Masaaki Hosomi , Yuichi Suwa , Keisuke Koba , Akihiko Terada
1
2
Tokyo University of Agriculture and Technology, Japan, Chuo University, Japan
86
PS13 – Managing Microbial Communities
Tuesday 21 August
466B
Convergent development of anodic bacterial communities in microbial fuel cells
1
1
1
2
2
Matthew Yates* , Patrick Kiely , Douglas Call , Hamid Rismani-Yadzi , Kyle Bibby , Jordan
2
1
1
Peccia , John Regan , Bruce Logan
1
2
Pennsylvania State University, United States, Yale University, United States
467B
Enhanced rate of fungal biodegradation of polyurethane and a study of fungal colonial
succession under composting conditions
1
2
1
Urooj Zafar* , Alan Heyworth , Geoff Robson
1
2
University of Manchester, United Kingdom, The TEG Group plc, Westmarch House, 42
Eaton Avenue, Buckshaw Village, Chorley, United Kingdom
468B
Structural changes of gut microbiota during berberine-mediated prevention of obesity
and insulin resistance in high-fat diet-fed rats
1
2
1
1
1
2
Xu Zhang* , Yufeng Zhao , Menghui Zhang , Xiaoyan Pang , Jia Xu , Chaoying Kang , Meng
2
1
3
3
3
3
1
Li , Chenhong Zhang , Zhiguo Zhang , Yifei Zhang , Xiaoying Li , Guang Ning , Liping Zhao
1
State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology,
2
Shanghai Jiao Tong University, China, Shanghai Center for Systems Biomedicine, Shanghai
3
Jiao Tong University, China, Shanghai Clinical Center for Endocrine and Metabolic Diseases
and Division of Endocrine and Metabolic Diseases, Rui Jin Hospital, Shanghai Jiao Tong
University, China
PS14 – Microbial Community Diversity: 16S and Beyond - Main Authors D – M
248B
Analyzing microbial diversity using the metagenomics tools of BioNumerics®
Katrien De Bruyne, Johan Goris, Katleen Vranckx*, Hannes Pousseele, Koen Janssens
Applied Maths NV, Belgium
249B
Metagenomics for practical management of microbial drinking water quality
Aleida de Vos van Steenwijk*, Janneke Krooneman, Bert Geurkink, Gijs Faber, Inez Dinkla
Bioclear, Netherlands
250B
Microbiome of Brazilian mangrove sediments as revealed by metagenomics
1
2
2
3
Armando Dias* , Diego Javier Jiménez , Diego Chaves , Danice Mazzer Luvizotto , Francisco
3
3
3
4
Dini-Andreote , Cristiane Cipola Fasanella , Maryeimy Varon Lopez , Sandra Baena , Rodrigo
5
5
3
Gouvêa Taketani , Itamar Soares Melo , Fernando Dini Andreote
1
2
University São Paulo - USP, Brazil, Colombian Corporation of Agricultural Research
3
(CORPOICA), Colombia, Department of Soil Science, “Luiz de Queiroz” College of
4
Agriculture, University of São Paulo, Brazil, Colombian Center for Genomic and
5
Bioinformatics from Extreme Environments (GeBiX), Colombia, Laboratory of Environmental
Microbiology, EMBRAPA Environment, Brazil, Brazil
251B
Consequences of agricultural land use in semi-arid ecosystems for soil bacterial
diversity revealed by genetic profiling of 16S rRNA genes
1
2
1
1
3
Guo-chun Ding* , Yvette Piceno , Nicole Weinert , Holger Heuer , Anja Dohrmann , Angel
4
4
3
1
Carrillo , Thema Castellanos , Christoph Tebbe , Kornelia Smalla
1
2
3
Julius Kühn-Institut, Germany, Earth Sciences Division, USA, Biodiversity, Johann Heinrich
4
von Thünen Institute, Germany, Centro de Investigaciones biologicas del Noroeste, Mexico
252B
Restoration process of a coal mining soil influences microbial community diversity,
abundance, and composition
1
2
2
2
Patricia Dorr de Quadros* , Kateryna Zhalnina , Austin Davis-Richardson , Jennie Fagen ,
1
2
Flavio Camargo , Eric Triplett
1
2
Federal University of Rio Grande do Sul, Brazil, University of Florida, United States
87
PS14 – Microbial Community Diversity
Tuesday 21 August
253B
Pyrosequencing analysis of bacterial community structure in an experimental drinking
water distribution system
Isabel Douterelo*, Rebecca Sharpe, Katherine Fish, Joby Boxall
The University of Sheffield, United Kingdom
254B
Microbial methane oxidation in livestock slurry surface crusts: community structure
and inhibition by N species
1
2
1
1
Yunfeng Duan* , Nico Boon , Lars Elsgaard , Søren O. Petersen
1
2
Aarhus University, Denmark, Ghent University, Belgium
255B
Deep into the bacterial communities living in soils cultivated with sugarcane in Brazil
1
1
1
2
Ademir Durrer* , Thiago Gumiere , Mayra C A Costa , Rodrigo G Taketani , Fernando D
1
Andreote
1
2
University of São Paulo, ESALQ, Brazil, Embrapa Environment, Brazil
256B
NCMA: A bioresource center for marine microorganisms
David Emerson*, Willie Wilson, Michael Preston
Bigelow Laboratory for Ocean Sciences, United States
257B
Effects of extremely short sludge retention time and short hydraulic retention time on
microbial community in an external membrane bioreactor
Ipek Ergal*, Mert Kumru, Halil Kurt, Senem Teksoy Başaran, Seval Sözen, Derin Orhon, Alper
Tunga Akarsubaşı
Istanbul Technical University, Turkey
258B
Molecular characterization of partial nitrification followed by anammox process
1
2
1
1
2
Elif Esen* , Duygu Dityapak , Halil Kurt , Mert Kumru , Bilge Alpaslan Kocamemi , Neslihan
2
1
Semerci , Alper Tunga Akarsubaşı
1
2
Istanbul Technical University, Turkey, Marmara University, Turkey
259B
Culture independent analysis of the colonic bacteriota during a long term probiotic
feeding study
1
1
1
2
2
James Evans* , Julian Marchesi , Eshwar Mahenthiralingam , Sue Plummer , Iveta Garaiova
1
2
Cardiff University, United Kingdom, Cultech, United Kingdom
260B
Stable isotope probing and metagenomics of active DMS degraders from terrestrial
environments
Ozge Eyice*, Moto Namura, Yin Chen, Hendrik Schäfer
University of Warwick, United Kingdom
261B
Are microbial communities of subsoils influenced by agricultural management?
1
2
2
3
4
Doreen Fischer* , Timo Kautz , Ulrich Köpke , Jean Charles Munch , Michael Schloter
1
2
Helmholtz Zentrum Muenchen , Germany, University of Bonn/ Institute of Organic
3
Agriculture, Germany, Technical University Munich/Chair for Soil Ecology, Germany,
4
Helmholtz Zentrum Muenchen/Environmental Genomics, Germany
262B
Short-term temporal changes in community structure overwhelm changes from
phosphorus addition in bacterioplankton communities of the Eastern Mediterranean
1
2
3
3
Stelios Fodelianakis* , Tron Frede Thingstad , Panagiotis Kasapidis , Paraskeyi Pitta , Ioannis
1
1
Karakassis , Emmanuel Ladoukakis
1
2
Department of Biology, University of Crete, Greece, University of Bergen, Department of
3
biology, Norway, Hellenic Centre for Marine Research, Greece
88
PS14 – Microbial Community Diversity
Tuesday 21 August
263B
Metagenomic analysis of water supply in geographically defined areas of low and high
incidence rates of inflammatory bowel disease in Manitoba, Canada
1
2
3
4
Jessica Forbes* , Gary Van Domselaar , Charles Bernstein , Denis Krause , Ehsan
4
Khafipour
1
Department of Medical Microbiology and Infectious Diseases, University of Manitoba, Canada
2
3
National Microbiology Laboratory, Public Health Agency of Canada, Canada, Department of
4
Internal Medicine, University of Manitoba, Canada, Department of Animal Science, University
of Manitoba, Canada
264B
Gut microbiome analysis of infected calves with low or high doses of Mycobacterium
avium subspecies paratuberculosis (MAP) at different ages identifies specific bacteria
associated with the outcome
1
2
2
2
3
Jessica Forbes , Jeroen De Buck , Rienske Mortier , Herman Barkema , Steve Hendrick ,
4
5
5
Gary Van Domselaar , Denis Krause , Ehsan Khafipour*
1
Department of Medical Microbiology and Infectious Diseases, University of Manitoba,
2
Canada, Department of Production Animal Health, Faculty of Veterinary Medicine, University
3
of Calgary, Canada, Western College of Veterinary Medicine, University of Saskatchewan,
4
Canada, National Microbiology Laboratory, Public Health Agency of Canada, Canada,
5
Department of Animal Science, University of Manitoba, Canada
265B
Effects of an ecological engineered oxygenation event on the microbial community
structure in an anoxic fjord in western Sweden
1
2
2
3
1
Michael Forth* , Bengt Liljebladh , Anders Stigebrandt , Per Hall , Alexander Treusch
1
2
University of Southern Denmark, Institute of Biology, Denmark, University of Gothenburg,
3
Department of Earth Science, Sweden, University of Gothenburg, Department of Chemistry,
Sweden
266B
Bacterial endophytes of forest conifers: specificity and adaptive potential of an
unexplored symbiosis
Carolin Frank*, Alyssa Carrell, Emily Wilson
University of California, Merced, United States
267B
Development of rapid technologies for the assessment of biodegradation potential in
contaminated groundwater using gene array technologies
1
2
2
2
2
3
Alessandra Frau* , M. J. Larkin , L. Kulakov , C. Allen , A. Kulakova , B. Mc Polin , R.
3
Doherty
1
2
Queen's University Belfast, United Kingdom, Queen's University Belfast - School of
3
Biological Sciences, United Kingdom, Queen's University Belfast - School of Planning,
Architecture and Civil Engineering, United Kingdom
268B
Pyrosequencing based assessment of bacterial and fungal community compositions in
compacted forest soils
1
1
2
1
Beat Frey* , Stefan Schmutz , Franco Widmer , Martin Hartmann
1
2
Swiss Federal Research Institute WSL, Switzerland, Agroscope Reckenholz Taenikon
ART, Switzerland
269B
Spatial and temporal variations of bacterial community in a sewage polluted urban
river: the Zenne River (Belgium)
1
1
2
1
1
Tamara Garcia-Armisen* , Ozgul Inceoglu , Natacha Brion , Adriana Anzil , Pierre Servais
1
2
Ecologie des Systèmes Aquatiques / Université Libre de Bruxelles, Belgium, Analytische en
Milieu Chemie/Vrije Universiteit Brussel, Belgium
270B
Variations of microbial abundance and diversity along a 260cm long peat core
indicative of flooding in the earliest holocene in central China
Linfeng Gong*, Wang Hongmei, Liu Qiao
China University of Geosciences, China
89
PS14 – Microbial Community Diversity
Tuesday 21 August
271B
Deconstructing the Microbial Community Degrading Plant Material in a Wet, Tropical
Forest
1
2
3
Dara Goodheart* , T.C. Hazen , M.K. Firestone
1
2
3
UC Berkeley, USA, University of Tennessee, Knoxville, UC Berkeley
272B
Integrated assessment of freshwater streams associated with wastewater treatment
plant discharge: microbiological and ecotoxicological approaches
Adrienne Gregg*, Hai Doan, Anupama Kumar
CSIRO Land and Water, Australia
273B
Gut bacterial communities in the giant land snail Achatina fulica and their modification
by sugarcane-based diet
1
2
2
3
M. Angela B. Grieco* , Alexander M. Cardoso , Janaína J.V. Cavalcante , Ricardo P. Vieira ,
3
4
5
2
Joyce L. Lima , Maysa , M. Clementino , Ana Tereza R. Vasconcelos , Eloi S. Garcia ,
2
6
3
Wanderley de Souza , Rodolpho M. Albano , Orlando B. Martins
1
2
Instituto Nacional de Metrologia, Qualidade e Tecnologia, Brazil, Diretoria de Programas,
3
Instituto Nacional de Metrologia, Qualidade e Tecnologia, Brazil, Instituto de Bioquímica
4
Médica, Universidade Federal do Rio de Janeiro, Brazil, Instituto Nacional de Controle da
5
Qualidade em Saúde, Fundação Oswaldo Cruz, Brazil, Laboratório Nacional de Computação
6
Científica, Brazil, Departamento de Bioquímica, Universidade do Estado do Rio de
Janeiro, Brazil
274B
Microbial activity and profile of bacterial communities in soil grown with sugarcane as
affected by straw cover and soil moisture
1
1
2
2
2
Régia Gualter* , Vitor Vargas , Thiago Gumiere , Pedro Andrade , Fernando Andreote ,
3
3
Heitor Cantarella , Adriana Silveira
1
2
Pós-Graduação em Agricultura Tropical e Subtropical, IAC, Brazil, Escola Superior de
3
Agricultura “Luiz de Queiroz”, Brazil, Instituto Agronômico-IAC, Centro de Solos e Recursos
Agroambientais, Brazil
275B
Abundance and diversity of boxB, a diagnostic gene for aerobic benzoate catabolism,
in a coastal norwegian fjord and computational diversity predictions in other
metagenomes
1
1
2
1
Christopher Gulvik* , T. Chad Effler , Reantha Pillay , Alison Buchan
1
2
The University of Tennessee, United States, Farragut High School, United States
276B
Using shotgun metagenomic data for less biased 16S rRNA gene community analysis
Jiarong Guo*, James Cole, Titus Brown, James Tiedje
Michigan State University, United States
277B
Bacterial community of the fresh volcanic deposits on barren land, grassland, and
woodland in the Island of Miyake, Japan, as revealed by pyrosequencing-based
analysis of 16S rRNA genes
1
2
3
4
4
Yong Guo* , Reiko Fujimura , Yoshinori Sato , Wataru Suda , Kenshiro Oshima , Masahira
4
5
2
Hattori , Takashi Kamijo , Hiroyuki Ohta
1
United Graduate School of Agricultural Science, Tokyo University of Agriculture and
2
3
Technology, Japan, Ibaraki University, Japan, Independent Administrative Institution
4
National Research Institute for Cultural Properties Tokyo, Japan, The University of
5
Tokyo, Japan, University of Tsukuba, Japan
90
PS14 – Microbial Community Diversity
Tuesday 21 August
278B
Microbial communities in soils from different agricultural management systems
revisited: A comparison of traditional and next-generation molecular tools
1
2
1
2
Martin Hartmann , Salome Schneider , Beat Frey , Franco Widmer*
1
2
Swiss Federal Research Institute WSL, Switzerland, Agroscope Reckenholz-Tänikon
Research Station ART, Switzerland
279B
Characterization of microbial communities in a UASB reactor treating municipal sewage
using sulfur-redox reaction process
1
1
1
1
Masashi Hatamoto* , Aida Azrina Azmi , Shinya Ono , Akinobu Nakamura , Masanobu
2
1
Takahashi , Takashi Yamaguchi
1
2
Nagaoka University of Technology, Japan, Tohoku University, Japan
280B
Comparative analysis of microbial diversity of Pockmark sediments of the Oslo Fjord
1
2
3
Thomas Haverkamp* , Øyvind Hammer , Kjetill S. Jakobsen
1
2
3
University of Oslo, Norway, Natural History Museum, University of Oslo, Norway, Centre for
Ecological and Evolutionary Synthesis, Dept. of Biology, University of Oslo, Norway
281B
Metabolic classification of "functional gene" amplicon libraries using HMM-denoising
and filtering: Finding fhs from homoacetogens in next generation sequencing datasets
Gemma Henderson*, Eric Altermann, Peter H. Janssen
AgResearch Ltd., New Zealand
282B
"High precision melting curve": a novel method for fast screening of environmental
samples for changes in bacterial phylogenetic composition prior to deep sequencing
1
2
3
4
Mathis Hjort Hjelmsø , Louise Feld , Lars Hestbjerg Hansen , Carsten Suhr Jacobsen*
1
University of Copenhagen / Geological Survey of Denmark and Greenland, Department of
2
Geochemistry, Denmark, Geological Survey of Denmark and Greenland, Department of
3
Geochemistry, Denmark, University of Copenhagen, Faculty of Natural Sciences, Department
4
of Biology, Denmark, Geological Survey of Denmark and Greenland, Department of
Geochemistry / Center for Permafrost (CENPERM), Department of Geography and Geology,
University of Copenhagen / University of Copenhagen, Faculty of Life Sciences, Institute of
Environment, Denmark
283B
Endophytic bacteria within the green siphonous seaweed Bryopsis: exploration of a
partnership
Joke Hollants*, Frederik Leliaert, Olivier De Clerck, Anne Willems
Ghent University, Belgium
284B
Simultaneous detection of diversity of bacterial 16S and IncP plasmids and merA genes
in soil samples by amplicon pyrosequencing
Peter Nikolai Holmsgaard*, Lars Hestbjerg Hansen, Søren Johannes Søren
University of Copenhagen, Denmark
285B
Comparison of bacterial community structures in 13 wastewater treatment plants from
two geographically distant cites in China using 16S rRNA gene-based pyrosequencing
Anyi Hu*, Jibing He, Chang-Ping Yu
Institute of Urban Environment, Chinese Academy of Sciences, China
287B
Systematic design of 18S rDNA primers for assessing eukaryotic diversity
1
2
3
3
3
3
Luisa Hugerth* , Daniel Lundin , Emilie Muller , Laura Lebrung , Hugo Roume , Paul Wilmes ,
2
Anders Andersson
1
2
3
Science for Life Laboratory, Sweden, Kungliga Tekniska Högskolan, Sweden, University of
Luxemburg, Luxembourg
91
PS14 – Microbial Community Diversity
Tuesday 21 August
288B
The Structure of Microbial Community in the Artificial and Natural Wetland Using
Pyrosequencing Data
Yeoung Min Hwang*, Keun Sik Baik, Seong Chan Park, Han Na Choe, Sonny Ramos, Ju Sik
Cho, Dong Cheol Seo, Chi Nam Seong
Sunchon National University, South Korea
289B
Studying the gut microbiota using rainbow trout as a model: the dynamics of the
microbiota changes after first feeding
Hans-Christian Ingerslev*, Mette Boye, Inger Dalsgaard, Lone Madsen
Technical University of Denmark, National Veterinary Institute, Denmark
290B
Microbial structure change in the groundwater samples from two boreholes at depths
of -250m in Horonobe Underground Research Laboratory
1
1
1
1
1
2
Kotaro Ise* , Isao Nanjo , Hiroki Amamiya , Yuki Amano , Teruki Iwatsuki , Takahiro Asano ,
3
1
1
Koji Kageyama , Yoshito Sasaki , Hideki Yoshikawa
1
2
3
Japan Atomic Energy Agency, Japan, CHUGAI TECHNOS Corporation, Japan, Gifu
University, Japan
291B
Similarity and composition of the bovine rumen bacterial community
Elie Jami, Itzhak Mizrahi*
Agricultural research organization, Volcani, Israel
292B
Comparative analysis of microplankton from the surrounding seawater of two deepwater coral reefs in the Norwegian Sea
1
1
2
2
1
Sigmund Jensen* , Jessica Ray , Michael D. J. Lynch , Josh D. Neufeld , Martin Hovland
1
2
University of Bergen, Norway, University of Waterloo, Canada
293B
Changes in bacterial community degrading chlorinated compounds by Fenton reagent
1
2
2
1
Eun Hea Jho , Naresh Singhal , Susan Turner , Kyoungphile Nam*
1
2
Seoul National University, South Korea, University of Auckland, New Zealand
294B
Comparisons of red pepper effects on kimchi fermentation using pyrosequencing and
H-NMR
Hyun Mi Jin, Sang Hyeon Jeong*, Che Ok Jeon
Chung-Ang University, South Korea
295B
Seasonal dynamics of microbial communities in polycyclic aromatic hydrocarbon contaminated sediments
1
2
2
2
Gloria Johnston* , Linda Farnham , Daniel Lisko , Carl Johnston
1
2
Kent State University, United States, Youngstown State University
296B
Zooming in on Lactic Acid Bacteria during industrial malting
1
2
1
1
2
Annelies Justé , Sofie Malfliet , Pieter Busschaert , Sam Crauwels , Luc De Cooman , Guido
2
1
1
Aerts , Kris Willems , Bart Lievens*
1
Laboratory for Process Microbial Ecology and Bioinspirational Management (PME&BIM), KU
Leuven Association, Lessius Mechelen, Campus De Nayer, Belgium and Scientia Terrae
2
Research Institute, B-2860 Sint-Katelijne-Waver, Belgium, Laboratory of Enzyme,
Fermentation and Brewing Technology (EFBT), Consortium for Industrial Microbiology and
Biotechnology (CIMB), Department of Microbial and Molecular Systems (M2S), LFoRCe,
K.U.Leuven Association, KaHo Sint-Lieven, B-9000 Ghent, Belgium
297B
Molecular analysis of microbial communities in the hydrocarbon-bearing sediments of
Lake Baikal
1
1
2
1
Vitaly Kadnikov* , Andrey Mardanov , Tamara Zemskaya , Nikolay Ravin
1
2
Centre “Bioengineering” RAS, Russian Federation, Limnological Institute, SB RAS, Russian
Federation
1
92
PS14 – Microbial Community Diversity
Tuesday 21 August
298B
Temporal dynamics of the microbial comunity structure in dark ocean of the western
north pacific
1
1
1
1
1
Ryo Kaneko* , Mario Uchimiya , Hideki Fukuda , Shoutaro Suzuki , Hiroshi Ogawa , Toshi
1
2
1
Nagata , Makio Honda , Koji Hamasaki
1
2
The University of Tokyo / Atmosphere and Ocean Research Institute, Japan, Japan Agency
for Marine-Earth Science and Technology, Japan
299B
Microbial diversity and spatial distribution in deep subseafloor sediments of the Izena
Cauldron, Okinawa Trough
1
2
1
2
2
Sanae Kano* , Yosuke Onishi , Takashi Yoshida , Hiroshi Ishida , Nobuhiro Maeda , Manabu
3
3
4
5
1
Tatsuta , Tetsuya Miwa , Nobuhiro Goto , Nobuyuki Okamoto , Yoshihiko Sako
1
2
3
Kyoto University, Japan, The General Environmental Technos Co., Ltd, Japan, Japan
4
Agency for Marine-Earth Science and Technology, Japan, Deep Ocean Resources
5
Development Co., Ltd, Japan, Japan Oil, Gas and Metals National, Japan
300B
Hydrazine synthase: a unique functional gene to study the biodiversity of anammox
bacteria
1
1
1
1
2
Boran Kartal* , Harry R. Harhangi , Mathilde Le Roy , Theo van Alen , Bao-lan Hu , Susannah
3
4
1
1
G. Tringe , Zhe-Xue Quan , Mike S.M. Jetten , Huub J.M. Op den Camp
1
2
3
Radboud University Nijmegen, Netherlands, Zhejiang University, China, JGI, United
4
States, Fudan University, China
301B
Cryopreservation techniques applied to the analysis of oceanic picoplankton diversity
Masanobu Kawachi*, Mary-Helene Noel, Mikihide Demura
National Institute for Environmental Studies, Japan
302B
Microbial community changes in response to chloramine residues in a lab-scale system
1
1
2
Bal KC , Arumugam Sathasivan , Maneesha Ginige*
1
2
Curtin University, Australia, CSIRO, Australia
303B
Discovery of cellulose-disrupting enzymes from an avicel-adapted forest soil eukaryotic
community by a metatranscriptomic approach
Nobutada Kimura*, Kazuto Takasaki, Manabu Kanno, Yoichi Kamagata
National Institute of Advanced Industrial Science and Technology (AIST), Japan
304B
Investigating the etiology of bovine digital dermatitis by a combination of 16S rRNA
gene analysis and fluorescence in situ hybridization
1
2
3
2
2
Kirstine Klitgaard* , Marianne Rasmussen , Nynne Capion , Mette Boye , Tim K Jensen
1
2
National Veterinary Institute, Technical University of Denmark, Denmark, Technical
3
University of Denmark, National Veterinary Institute, Denmark, University of Copenhagen,
Faculty of Life Science, Department of Large Animal Science, Denmark
305B
Analysis of microbial community functions involved in effective and eco-friendly
industrial tannery wastewater treatment
1
1
1
1
2
Sung-Cheol Koh* , Kalu Ibe Ekpeghere , Shin-Young Ha , Soo-Hyeon Kim , Hong-Gi Kim , In1
3
Soo Kim , Bong-Keun Song
1
2
3
Korea Maritime University, South Korea, BM Company, South Korea, University of North
Carolina, South Korea
306B
Deep Ocean microbial communities in the South Adriatic Pit
1
2
1
1
2
Marino Korlević* , Danny Ionescu , Paolo Paliaga , Tina Šilović , Rudolf Amann , Mirjana
1
1
Najdek , Sandi Orlić
1
2
Ruđer Bošković Institute Center for Marine Research, Croatia, Max Planck Institute for
Marine Microbiology, Germany
93
PS14 – Microbial Community Diversity
Tuesday 21 August
307B
The biodegradation of para-nitrophenol by river water biofilms: a functional marker
approach
1
2
2
2
1
Agnieszka Kowalczyk* , Roger van Egmond , Chris Finnegan , Oliver Price , Gary Bending ,
1
Hendrik Schafer
1
2
The University of Warwick, United Kingdom, Safety & Environmental Assurance Centre,
Unilever, United Kingdom
308B
Effects of commercially available enzymes and antimicrobial peptides on bacteria
communities in sydney harbour, Australia
1
2
3
2
Agnete Krabbe Katholm* , Henrik T. Jespersen , Annemette Palmqvist , Kjeld Schaumburg ,
4
3
Eva Wallström , Benni W. Hansen
1
2
3
Roskilde University, Denmark, Roskilde University, CISMI/FiBaC, Denmark, Roskilde
4
University, Department of Environmental, Social and Spatial Change, Denmark, EnPro
ApS, Denmark
309B
Phylogenetic diversity of planktonic bacterial communities of Lake Hévíz
Gergely Krett*, Katalin Jáger, Judit Makk, Károly Márialigeti, Andrea K. Borsodi
Eötvös Loránd University; Department of Microbiology, Hungary
310B
Monitoring microbial species and total elemental of urban air particulate in Istanbul
1
2
3
1
1
Mert Kumru* , Melih Özgür Çelik , Kerem Uzel , Aslı Baysal , Süleyman Akman , Alper Tunga
1
Akarsubaşı
1
2
Istanbul Technical University, Turkey, Charité - Universitätsmedizin
3
Berlin, Germany, Bogazici University, Turkey
311B
Microbial community dynamics of İSTAÇ landfill leachate wastewater treatment plant in
İstanbul, Turkey
1
2
1
1
Halil Kurt , Aslıhan Demircan , Mert Kumru , Alper Tunga Akarsubaşı*
1
Istanbul Technical University Molecular Biology, Biotechnology & Genetics Research
2
Centre, Turkey Yildiz Technical University, Faculty of Chemical and Metallurgical
Engineering, Bioengineering Department, Turkey
312B
Distribution of ammonia-oxidizing archaea and bacteria along an ammonia gradient in
oceanic sediment
1
1
1
2
3
Lorenzo Lagostina* , Lars Schreiber , Mark Lever , Thomas Evans , Tobias Goldhammer ,
4
1
Andreas Schramm , Dorthe Groth Petersen
1
Center for Geomicrobiology, Department of Bioscience, Aarhus University, Denmark,
2
3
Department of Geoscience, University of Bremen, Germany, Center for Marine
4
Environmental Sciences, University of Bremen, Germany, Department of Bioscience,
Microbiology, Aarhus University, Denmark
313B
Archaeal and bacterial communities in the potential gas hydrate bearing sediments at
offshore SW Taiwan
1
1
1
1
1
Mei-Chin Lai* , Chuan-Chuan Hung , Shu-Yao Wu , Shu-Jung Lai , Jiun-Yan Ding , Saulwood
2
3
4
Lin , Tsanyao Frank Yang , Po-Chun Chen
1
2
National Chung Hsing University/Department of Life Sciences, Taiwan, National Taiwan
3
Univ/Institute of Oceanography, Taiwan, National Taiwan Univ/Dept. of
4
Geosciences, Taiwan, Central Geological Survey, Taiwan
314B
Assessing biodiversity of thermophilic fungal species in composts using conventional
and molecular techniques
Adrian Langarica Fuentes*, Geoff D. Robson, Pauline S. Handley
University of Manchester, United Kingdom
315B
Isolation and characterization of Cr(VI)-reducing bacteria from a chromium
contaminated aquifer in Guanajuato, México with potential application in
bioremediation
Paloma Lara*, Enrique Morett, Katy Juárez
Universidad Nacional Autónoma de México/ Instituto de Biotecnología, Mexico
94
PS14 – Microbial Community Diversity
Tuesday 21 August
316B
Paenibacillus hankukensis sp. nov., isolated from soil
1
1
2
1
2
Geon-Hyoung Lee , Sung-Jun Cho* , Sung-Heun Cho , Suhk-Hwan Park , Seung Bum Kim
1
2
Kunsan National University/Dept. of Biology, South Korea, Dept. of Microbiology & Molecular
Biology, Chungnam National University, South Korea
317B
Phylogenetic Characterization of Actinobacteria in a Bamboo (Sasa boreali) Forest Soil
by Using Pyrosequencing
Hyojin Lee*, Kyungsook Whang
Department of Microbial & Nano Materials, Mokwon University, South Korea
318B
Rhizosphere bacterial communities of bacterial wilt resistant or susceptible tomato
cultivars and a non-host baechu cultivar
1
2
1
1
1
Hyoung Ju Lee* , Byung Kwon Kim , Myung Hwan Lee , Hyun Gi Kong , Eun Joo Jung , Hae
1
2
1
Jin Joo , Jihyun F. Kim , Seon-Woo Lee
1
2
Dong-A University, South Korea, Yonsei University, South Korea
319B
The malodor deodorizing effect of Effective Microorganism (EM) in food garbage
Young Ok Lee*, Hong-Jae Choi
Daegu University, South Korea
320B
Microbial ecology surrounding methylated sulfur and selenium compound formation in
freshwater
1
1
2
3
3
Celine Lesaulnier* , Gabriel Singer , Jutta Niggemann , Cédric Gerard , Xavier LeCoz , Claus
1
2
1
Pelikan , Thorsten Dittmar , Alexander Loy
1
2
3
University of Vienna, Austria, Max Planck Institute, Germany, Nestlé Research Center,
Switzerland
321B
Abundance and diversity of Sphingomonas in Shenfu petroleum-wastewater irrigation
zone, China
Hui Li*, Lisha Zhou, Ying Zhang, Siqin Han, Hui Xu
Institute of Applied Ecology, Chinese Academy of Science, China
322B
Identification of novel bacterial copper membrane monooxygenases (CuMMO) related
to C1-C4 alkane oxidation in a natural hydrocarbon plume
Meng Li*, Sunit Jain, Brett Baker, Chris Taylor, Gregory Dick
University of Michigan, USA
323B
Identification of bacteria and T4-type bacteriophages that assimilate carbon from root
cap cells under aerobic and anaerobic soil conditions using a DNA-SIP approach
Yong Li*, Takeshi Watanabe, Jun Murase, Susumu Asakawa, Makoto Kimura
Nagoya University, Japan
324B
Bacterial and archaeal diversity in soil from Atlantic forest of Sao Paulo State
1
2
1
Julia Elidia Lima* , Armando Cavalcante Franco Dias , Emiliana Manesco Romagnoli , Ademir
1
1
Durrer , Fernando Dini Andreote
1
2
ESALQ - University of Sao Paulo, Brazil, CENA - University of Sao Paulo, Brazil
325B
Microarray and N isotope analyses of denitrifying communities in New River Estuary,
USA
1
2
3
1
2
Jessica Lisa* , Amal Jayakumar , Craig Tobias , Bongkeun Song , Bess Ward
1
2
3
UNC Wilmington, USA, Princeton University, USA, University of Connecticut, USA
326B
Polyphasic approach for assessing changes in marine microbial community under the
double stress of UV and diesel oil
Shiu-Mei Liu*, Chi-Yuen Yen, Hung-Hsuan Chien
Institute of Marine Biology, National Taiwan Ocean University, Taiwan
15
95
PS14 – Microbial Community Diversity
Tuesday 21 August
327B
The effect of whey permeate additions on growth performance, gastrointestinal
morphology, and colonic microbiota of postweaned piglets
1
1
2
3
Sarmauli Manurung* , Tim Kare Jensen , Bent Borg Jensen , Lars Mølbak
1
2
Technical University of Denmark, National Veterinary Institute, Denmark, University of Århus,
3
Department of Animal health, Welfare, and Nutrition, Denmark, Chr Hansen A/S, Animal
Health and Nutrition, Denmark
328B
Sulfur-cycling bacteria dominate marine harbour structures with past evidence of
accelerated low water corrosion (ALWC)
1
2
3
4
Florence Marty* , Sandrine Païsse , Jean-François Ghiglione , José M. Sánchez-Amaya ,
5
2
1
1
Hervé Gueuné , Laurent Quillet , Mark C.M. van Loosdrecht , Gerard Muyzer
1
2
Delft University of Technology, Netherlands, Université de Rouen, UFR des Sciences/2M2C,
3
UMR CNRS 6143, France, Université Pierre et Marie Curie (Paris 6)/ Laboratoire
4
d'Océanographie Biologique de Banyuls, France, Universidad de Cádiz/ Laboratorio de
5
Corrosión, Spain, CORRODYS, Centre de Corrosion Marine et Biologique, France
329B
Finding microbial species: taxonomic unit discovery using SSU ribosomal RNA
sequences at a global scale
João Frederico Matias Rodrigues*, Christian von Mering
University of Zürich, Switzerland
330B
Microbial community structure based on 16S rRNA and pmoA genes in the dissolved
methane treatment reactors receiving UASB effluents
1
2
2
1
Norihisa Matsuura* , Masashi Hatamoto , Takashi Yamaguchi , Akiyoshi Ohashi
1
2
Hiroshima University, Japan, Nagaoka University of Technology, Japan
331B
Bacterial community diversity increases with soil organic matter decomposition:
insights from a dual-stable isotope probing method
1
1
1
1
1
2
Rebecca Mau* , Cindy Liu , Michael Dwan , Egbert Schwartz , Paul Dijkstra , Lance Price ,
1
Bruce Hungate
1
2
Northern Arizona University, USA, Translational Genomics Research Institute, USA
332B
A novel fine-scale approach for sampling deep-sea Fe oxide-dominated hydrothermal
vent microbial mats at Loihi Seamount
1
2
3
3
2
Sean McAllister* , Nam Siu , Richard Davis , Bradley Tebo , Craig Moyer
1
2
3
University of Delaware, USA, Western Washington University, USA, Oregon Health &
Science University, USA
333B
Deep sequencing of evolving populations in bacterial biofilms
Kerensa McElroy*, Jerry Woo, Marwan Majzoub, Janice Hui, Staffan Kjelleberg, Scott Rice,
Suhelen Egan, Torsten Thomas
University of New South Wales, Australia
334B
Analysis of the bacterial diversity in the fecal material of the endangered Yangtze
finless porpoise, Neophocaena phocaenoides asiaeorientalis
1
2
2
2
2
Richard McLaughlin* , Q. Zhao , M. Chen , J. Zheng , D. Wang
1
2
Gateway Technical College, United States, Institute of Hydrobiology, Chinese Academy of
Sciences, China
335B
The Microbial Database for Danish Wastewater Treatment Plants
Artur Mielczarek*, Poul Larsen, Jeppe Lund Nielsen, Per Halkjær Nielsen
Aalborg University, Denmark
336B
Molecular diversity of the giant symbiotic bacterium Epulopiscium fishelsoni in fish
from the Red Sea
Sou Miyake*, Uli Stingl
KAUST, Saudi Arabia
96
PS14 – Microbial Community Diversity
Tuesday 21 August
337B
Microplanktonic community structure in a coastal system relative to a Phaeocystis
bloom inferred from morphological and Tag pyrosequencing methods
1
1
1
2
Sébastien Monchy , Jean-David Grattepanche , Elsa Breton , Dionigia Meloni , Giovanna
2
2
2
2
3
Sanciu , Magali Chabé , Laurence Delhaes , Eric Viscogliosi* , Télesphore Sime-Ngando ,
1
Urania Christaki
1
2
LOG, Université du Littoral Côte d'Opale, France, CIIL, Institut Pasteur de Lille, France,
3
LMGE, Université Blaise Pascal, France
338B
Dynamics changes in soil microbial community inoculated with phosphate-solubilizing
bacteria (PSB) for enhancing Cd removal efficiency in phytoremediation
Hee Sun Moon*, Seulki Jeong, Kyoungphile Nam
Seoul National University, South Korea
339B
Microbial diversity in the frass of an endemic New Zealand wood boring beetle larvae,
the Huhu grub (Prionoplus reticularis, Coleoptera; Cerambycidae)
Hugh Morgan*, Ian McDonald, Jay Viswam
University of Waikato, New Zealand
340B
Community compositions in swine manure biogas plants
Freya Mosbæk*, Piotr Starnawski, Jeppe Lund Nielsen
Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg
University, Denmark
341B
Microbial diversity pattern during the cheese ripening: study on traditional Croatian
cheeses
1
2
2
1
Mirna Mrkonjic Fuka* , Marion Engel , Stefanie Wallisch , Andrea Skelin , Sulejman
1
2
Redžepović , Michael Schloter
1
2
University of Zagreb Faculty of Agriculture, Croatia, Helmholtz Zentrum München, Germany
342B
Investigation of microbial diversity of aerosols at a saline playa in Victoria, Australia
using culturing and 454 sequencing
1
1
2
1
Chris Munday* , Patrick De Deckker , Nigel Tapper , Gwen Allison
1
2
Australian National University, Australia, Monash University, Australia
PS15 – Mobility of Genes and the Species Concept
469B
Insights into the Rumen Plasmidome
1
2
1
2
3
Aya Brown Kav , Goor Sasson* , Elie Jami , Adi Doron-Faigenboim , Itai Benhar , Itzhak
2
Mizrahi
1
2
3
ARO / Tel Aviv University, Israel, ARO, Israel, Tel Aviv University, Israel
470B
Identification of an arsenic resistance transposon nested in a TnMERI1-like class II
mercury resistance transposon of Bacillus sp. MB24
1
2
2
3
1
Mei-Fang Chien* , Hui-Erh Yang , Fan-Fan Chen , Masaru Narita , Keisuke Miyauchi , Ginro
1
2
Endo , Chieh-Chen Huang
1
2
Tohoku Gakuin University/Faculty of Engineering, Japan, National Chung Hsing University 3
Department of Life Sciences, Taiwan, Tohoku Afforestation and Environmental Protection
Ltd., Japan
471B
Metagenomic recovery and analysis of accessory genes present on mobile genetic
elements
1
2
3
1
Vincent Dunon* , Rob Lavigne , Eva Top , Dirk Springael
1
2
Division of Soil and Water Management, KU Leuven, Belgium, Division of Gene Technology,
3
KU Leuven, Belgium, Department of Biological Sciences, University of Idaho, United States
97
PS15 – Mobility of Genes and the Species Concept
Tuesday 21 August
472B
Bioinformatic evidence and characterization of novel putative large conjugative
transposons from genera Bacteroides and Prevotella
Katja Gorenc*, Tomaž Accetto, Gorazd Avguštin
University of Ljubljana, Biotechnical faculty, Slovenia
473B
Secondary metabolism as a driving force in species evolution
Paul Jensen*, Kevin Penn, Natalie Millan, Kelle Freel
University of California San Diego, United States
474B
Complete nucleotide sequence of self-transmissible plasmid pD2RT provides new
insight into diversity and distribution of toluene-catabolic plasmids
1
2
2
2
1
Jekaterina Jutkina* , Lars Hestbjerg Hansen , Lili Li , Anders Norman , Eeva Heinaru , Eve
1
1
Vedler , Ain Heinaru
1
2
University of Tartu, Institute of Molecular and Cell Biology, Estonia, University of
Copenhagen, Institute of Biology, Denmark
475B
Strain-level genomic variation in natural populations of Lebetimonas from an erupting
deep sea volcano
Julie Meyer*, Julie Huber
Marine Biological Laboratory, United States
476B
A multilocus sequence analysis of the genus Salinispora
Natalie Millan*, Kelle Freel, Paul Jensen
Scripps Institution of Oceanography, United States
477B
Origin and fate of an IncP-1 plasmid, pKJK10
Jochen Mueller*, Paula Martínez-Lavanchy, Matthias Kästner, Hermann Heipieper
Helmholtz Centre for Environmental Research - UFZ, Germany
478B
Tracing host-plasmid dynamics within the deeply sequenced Acid Mine Drainage model
system
1
1
2
3
1
Anders Norman* , Brian Thomas , Christopher Miller , Vincent Denef , Jillian Banfield
1
2
3
University of California Berkeley, USA, University of Colorado, USA, University of
Michigan, USA
479B
Disinterring ecologically distinct populations of Candidatus Accumulibacter phosphatis
Ben Oyserman*, Katherine McMahon
University of Wisconsin, Madison, USA
480B
Limiting the occurrence of antimicrobial resistance through targeted interventions
directed at plasmid stability
1
1
1
2
2
Leise Riber* , Mette Burmølle , Stefan Morbjerg , Martin Alm , Peter Thomsen , Lars
1
1
Hestbjerg Hansen , Søren Johannes Sørensen
1
2
Institute of Biology, University of Copenhagen, Denmark, BioModics ApS, Denmark
481B
Bacterial strains isolated from marine aquaculture environments harbor SXT/R391-like
integrative and conjugative elements (ICEs) encoding resistance to antibiotics, mercury
and quaternary ammonium compounds
Arturo Rodríguez-Blanco*, Manuel L. Lemos, Carlos R. Osorio
University of Santiago de Compostela CIF:Q1518001A, Spain
482B
Transformation and conjugal transfer of foreign genes into the filamentous multicellular
cyanobacteria (Subsection V) Fischerella and Chlorogloeopsis
1
1
2
1
2
Karina Stucken* , Judith Ilhan , Mayo Roettger , Tal Dagan , William F. Martin
1
Heinrich-Heine Universität Düsseldorf/ Institute of Genomic Microbiology, Germany,
2
Heinrich-Heine Universität Düsseldorf/ Institute of Molecular Evolution, Germany
98
PS15 – Mobility of Genes and the Species Concept
Tuesday 21 August
483B
An environmental multiresistance plasmid can be transferred to foodborne pathogens
1
2
3
3
Eva Van Meervenne* , Els Van Coillie , Frederiek - Maarten Kerckhof , Frank Devlieghere ,
2
4
5
3
Lieve Herman , Leen De Gelder , Eva Top , Nico Boon
1
2
Ghent University / Institute for Agricultural and Fisheries Research, Belgium, Institute for
3
4
Agricultural and Fisheries Research, Belgium, Ghent University, Belgium, University College
5
Ghent, Belgium, University of Idaho, United States
484B
Integron characterization and typing of Belgian isolates of Shiga toxin-Producing
Escherichia coli
1
2
3
2
3
Eva Van Meervenne* , Nico Boon , Karen Verstraete , Frank Devlieghere , Koen De Reu ,
3
4
4
3
Lieve Herman , Glenn Buvens , Denis Piérard , Els Van Coillie
1
2
Ghent University / Institute for Agricultural and Fisheries Research, Belgium, Ghent
3
4
University, Belgium, Institute for Agricultural and Fisheries Research, Belgium, Universitair
Ziekenhuis Brussel, Belgium
485B
ODoSE: a webserver for genome-wide calculation of adaptive divergence in
prokaryotes
1
2
2
3
4
Michiel Vos* , Tim te Beek , Marc van Driel , Martijn Huynen , Adam Eyre-Walker , Mark van
5
Passel
1
2
University of Exeter, United Kingdom, Netherlands Bioinformatics
3
4
Centre, Netherlands, Radboud University, Netherlands, University of Sussex, United
5
Kingdom, Wageningen University, Netherlands
PS16 – Soil Microbiology and Heterogeneity
076B
Soil persistent Escherichia coli
1
1
1
2
2
Florence Abram* , Nicole Clarke , John Murphy , Emma Moynihan , Fiona Brennan
1
2
NUI, Galway, Ireland, Teagasc, Ireland
077B
Diversity and composition of nitrogen fixing communities in Argentinean soils as
affected by agricultural practices
1
2
3
2
4
O. Mario Aguilar* , Monica Collavino , James Tripp , Priscila Calderoli , María Laura Vidoz ,
5
3
Mariano Donato , Jonathan P. Zehr
1
IBBM-CONICET, Universidad Nacional de La Plata, Facultad Ciencias Exactas, Argentina,
2
3
Universidad Nacional de La Plata, Facultad Ciencias Exactas, Argentina, University of
4
5
California, USA, Universidad del Nordeste, Argentina, Universidad Nacional de La Plata,
Facultad Ciencias Naturales y Museo, Argentina
078B
Application of quantitative PCR methods for the analysis of a BTEX contaminated
plume
Christopher Allen*, Paul Flanagan, Anna Kulakova, Leonid Kulakov, Michael J Larkin
Queen's University Belfast, United Kingdom
079B
Bacterial nitrifying and denitrifying communities in soils with organic and conventional
agricultural practices
Celine Amsaleg*, Mehdi Zerarka, Anniet M Laverman, Josette Garnier
University Pierre and Marie Curie, France
080B
Effect of conversion of conventional pasture to intensive silvopastoral systems on soil
bacterial communities
1
1
1
1
Ziv Arbeli* , Ana María Cubillos Cárdenas , Victoria E. Vallejo , Wilson Teran , Richard P.
2
1
Dick , Fabio Roldan
1
2
Pontificia Universidad Javeriana, Colombia, The Ohio State University, Colombia
99
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
081B
The Effect of carbon input on the evolution of the soil microbial community in the
central hyper-arid Namib Desert
1
1
1
2
Alacia Armstrong , Jean-Baptiste Ramond* , Marla I. Tuffin , Don A. Cowan
1
Institute for Microbial Biotechnlogy and Metagenomics (IMBM), University of the Western
2
Cape, South Africa, Department of Genetics, University of Pretoria, South Africa
082B
Diversity of methane-oxidizing bacteria in rice paddy field ecosystem: investigation by
cultivation method and fluorescence in situ hybridization
1
2
1
1
1
Susumu Asakawa* , Dayéri Dianou , Chihoko Ueno , Takuya Ogiso , Tran Van Huy , Arata
1
1
Katayama , Makoto Kimura
1
2
Nagoya University, Japan, Centre National de la recherche Scientifique et
technologique, Burkina Faso
083B
The microbial community structure of soil samples enriched with methanol at different
pH and temperature
1
2
3
3
Rozelin Aydin* , Francien Peterse , Stefan Schouten , Jaap S Sinninghe Damsté , Hauke
4
4
Smidt , Alfons JM Stams
1
2
3
Laboratory of Microbiology, Netherlands, ETH Zurich, Switserland, NIOZ, Netherlands,
4
Wageningen University/Laboratory of Microbiology, Netherlands
084B
Microbial characterization of angled core samples of a zerovalent iron barrier in
Belgium
1
2
3
4
3
3
3
Rozelin Aydin* , F Maphosa , Q Simons , H Sapion , S van Roy , N Hermans , L Bastiaens ,
2
H Smidt
1
2
Laboratory of Microbiology, Netherlands, Wageningen University/Laboratory of Microbiology,
3
4
Netherlands, VITO, Belgium, SAPION, Belgium
085B
The mineral composition and presence of charcoal in artificial soils determine microbial
community structure and the response to spiked phenanthrene
1
2
3
2
3
Doreen Babin* , Guo-Chun Ding , Geertje Johanna Pronk , Holger Heuer , Katja Heister ,
3
2
Ingrid Kögel-Knabner , Kornelia Smalla
1
2
Julius-Kühn Institut, Germany, Julius-Kühn Institut, Federal Research Centre for Cultivated
3
Plants, Germany, Technische Universität München, Lehrstuhl für Bodenkunde, Germany
086B
Hydraulically active biopores stimulate pesticide mineralization in agricultural subsoil
1
1
2
2
1
Nora Badawi* , Anders R. Johnsen , Kristian K. Brandt , Jan Sørensen , Jens Aamand
1
2
GEUS, Denmark, University of Copenhagen, Dept. of Agriculture and Ecology, Denmark
087B
Exploring the structure and function of fungal communities in forest soils: challenges
and limitations of current methodologies
Petr Baldrian*, Tomáš Větrovský, Jana Voříšková, Ivana Eichlerová, Jaroslav Šnajdr, Lucia
Žifčáková, Martina Štursová
Institute of Microbiology ASCR, Czech Republic
088B
Microbial communities in ephemeral streams and the impact of saline mine discharge
1
2
1
Janina Beyer-Robson* , Philip Bond , Sue Vink
1
2
Sustainable Minerals Institute, The University of Queensland, Australia, Advanced Water
Management Centre, The University of Queensland, Australia
089B
Characteristics of metal-tolerant bacteria and their plasmids isolated from a platinum
mine tailings dam in South Africa
Carlos Bezuidenhout*, Tladi Mahlatsi, Laurette Marais, Mark Maboeta
North-West University: Potchefstroom Campus, South Africa
100
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
090B
Impact of nutrient addition on microbial community decomposition of wheat residues
13
and carbon sequestration assessed with C labelled wheat
1
1
2
2
1
Andrew Bissett* , Clive Kirkby , Maria Luisa Gutierrez Zamora , Mark Brwon , Peter Thrall ,
1
Richardson Alan
1
2
CSIRO Plant Industry, Australia, School of Biotechnology and Biomolecular Sciences,
University of New South Wales, Australia
091B
Carbon isotope fractionation of Italian rice field soil under H2/CO2 and different
temperature regimes
Martin Blaser*, Ralf Conrad
Max-Planck-Institute for Terrestrial Microbiology, Germany
092B
Extracellular enzyme activity assay as indicator of soil microbial functional diversity
and activity
Niels Bohse Hendriksen, Anne Winding*
Aarhus University, Dept. of Environmental Science, Denmark
093B
Degradation of fungal mycelia in soil: decomposition rate and microbial community
analysis
Vendula Brabcova*, Monika Nováková, Anna Davidová, Petr Baldrian
Institute of Microbiology, ASCR, Czech Republic
094B
Functional diversity and quantification of catabolic genes (BPH) in "Amazonian dark
earth" and its adjacent soils
1
1
1
2
1
Maria Brossi* , Mariana Germano , Lucas Mendes , Shoko Iwai , Siu Tsai
1
2
University of São Paulo - Center of Nuclear Energy in Agriculture, Brazil University of
California, USA
095B
Enzyme kinetics and temperature sensitivity in Arctic permafrost soils
1
1
1
1
1
Jiří Bárta* , Markéta Applová , Iva Lacmanová , Petr Čapek , Kateřina Diáková , Hana
1
2
Šantrůčková , Andreas Richter
1
Department of Ecosystem Biology, University of South Bohemia, Czech Republic,
2
Department Terrestrial Ecosystem Research, University of Vienna, Austria
096B
Factors influencing the bacterial community structure and distribution in northern
peatlands
1
2
2
Hinsby Cadillo-Quiroz* , Stephen Zinder , Joseph Yavitt
1
2
Arizona State University, USA, Cornell University, USA
097B
Effects of plants materials on the dissipation of herbicide pendimethalin in soil and its
microbial communities
Bing-Sheng Chen*, Fang-Yu Hsu, Jui-Hung Yen
Department of Agricultural Chemistry, National Taiwan University, Taiwan
098B
Changes in soil microbial community structure and metabolic activity following the
convertion from the native Pinus massoniana plantations to the exotic Eucalyptus
urophylla × grandis plantations
Falin Chen*, Kai Zhang, Yifeng Li, Hua Zheng
State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental
Sciences, Chinese Academy of Sciences, China
101
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
099B
Plasmid isolation and characterization from a biofilter system used for pesticide
removal
1
2
2
2
2
2
María Del Papa* , María Martini , María Salas , Jose López , Ileana Salto , María Giusti ,
2
2
2
3
Mauricio Lozano , Gonzalo Torres Tejerizo , Mariano Pistorio , Andreas Schlüter , Alfred
3
2
Pühler , Antonio Lagares
1
2
Universidad Nacional de La Plata-UNLP, Argentina, Instituto de Biotecnología y Biología
3
Molecular-IBBM-CONICET-UNLP, Argentina, Lehrstuhl für Genetik, Universität
Bielefeld, Germany
100B
Influence of management practices on microbial consortia in paddy soils
Thilo Eickhorst*, Hannes Schmidt, Stefan Knauth, Rolf Tippkötter
University of Bremen, Soil Science, Germany
101B
Microbial diversity and physicochemical properties of soil in the lead (Pb) and zinc (Zn)
mining area of Ishiagu, Nigeria
Uchechi Ekwenye*, Chiedozie Nwachukwu
Michael Okpara University of Agriculture,Umudike, Nigeria
102B
Changes of soil microbiome due to repeated addition of manure from oxytetracyclinetreated dairy cow
1
1
2
3
1
Dana Elhottova* , Martina Kyselkova , Robert Bradley , Heike Schmitt , Jiri Jirout , Nadezda
4
2
1
Vrchotova , Nancy Allard , Havlickova Petra
1
2
Biology Centre ASCR, Institute of Soil Biology, Czech Republic, Sherbrooke University,
3
Faculty of Science, Canada, Utrecht University, Institute for Risk Assessment Sciences,
4
Netherlands, Global Change Research Centre ASCR, Lab Metabol & Isotop Anal, Czech
Republic
103B
Transport of BAM degrading bacteria facilitated by fungal hyphae increases BAM
mineralization in sand
1
2
1
2
Berith Elkær Knudsen* , Lea Ellegaard-Jensen , Christian Nyrop Albers , Søren Rosendahl ,
1
Jens Aamand
1
2
GEUS, Denmark, University of Copenhagen, Denmark
104B
Degradation of the herbicide diuron by different Mortierella strains
1
2
1
Lea Ellegaard-Jensen* , Jens Aamand , Søren Rosendahl
1
2
University of Copenhagen, Denmark, Geological Survey of Denmark and Greenland
(GEUS), Denmark
105B
The effects of light, fertilization, plant density on Arbuscular mycorrhizal fungi in root of
Compositae poisonous herb Ligularia virgaurea
Huyuan Feng*, Guoxi Shi, Yongjun Liu, Shengjing Jiang, Lin Mao, Gang Cheng, Guozhen Du,
Lizhe An
School of Life Sciences, Lanzhou University, China
106B
Bacterial and Biochemical indicators of agricultural management for soil under no-till
crop production
1
1
2
1
1
Eva Figuerola , Leandro Guerrero , Alejandro Ferrari , Silvina Rosa , Leonardo Erijman , Luis
2
Wall*
1
Instituto de Investigaciones en Ingeniería Genética y Biología Molecular (INGEBI2
CONICET), Argentina, LBMIBS - DCyT - University of Quilmes, Argentina
107B
Bacterial Mobilization of Sulfur and Phosphorous in Biochar Amended Soils
1
1
2
1
Aaron Fox , Ruth Cullen , Witold Kwapinski , Achim Schmalenberger*
1
2
University of Limerick, Life Sciences, Ireland, University of Limerick, Chemical and
Environmental Sciences, Ireland
102
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
108B
How does the disruption of Pleurozium and Sphagnum moss carpets effect the
microbial communities of black spruce in boreal forested peatlands
Mark Fox*, Yves Bergeron, Pascal Drouin
University of Quebec, Canada
109B
Microbial activity and plant community recovery from grazing may be mediated by
nutrient availability in low Arctic meadows
1
1
2
3
Gaia Francini* , Minna-Maarit Kytöviita , Sari Stark , Minna Männistö
1
2
3
University of Jyväskylä, Finland, University of Lapland, Finland, METLA, Finland
110B
Treated waste water irrigation affects the soil microbiome seasonal dynamics
1
2
1
Sammy Frenk* , Yitzhak Hadar , Dror Minz
1
2
Agricultural Research Organization - Volcani Center, Israel, The Hebrew University, Israel
111B
Soil bacterial community composition, activity and size disruption by metal oxide
nanoparticles
1
2
2
2
1
Sammy Frenk* , Tal Ben-Moshe , Ishai Dror , Brian Berkowitz , Dror Minz
1
2
Agricultural Research Organization - Volcani Center, Israel, Weizmann Institute of
Science, Israel
112B
Succession of nitrogen-cycling microbes in early volcanic environment on the island of
Miyake (Japan) revealed by metagenomics
1
2
3
2
1
Reiko Fujimura* , Seok-Won Kim , Yoshinori Sato , Wataru Suda , Tomoyasu Nishizawa ,
2
2
4
1
Kenshiro Oshima , Masahira Hattori , Takashi Kamijo , Hiroyuki Ohta
1
2
3
Ibaraki University, Japan, The University of Tokyo, Japan, Center for Conservation and
4
Restoration Techniques National Research Institute for Cultural Properities, Japan, University
of Tsukuba, Japan
113B
Diversity of Desulfonating Bacteria in the Mycorrhizosphere
Jacinta Gahan*, Achim Schmalenberger
University of Limerick, Life Sciences, Ireland
114B
Pseudomonas putida constructs for buried landmine detection
Shany Gefen-Treves*, Sharon Yagur-Kroll, Shimshon Belkin
Hebrew University of Jerusalem, Israel
115B
Eukariotic metatranscriptomes from two contrasted alpine meadows
Roberto Geremia*, Tarfa Mustafa, Lucie Zinger, Philippe Choler, Eric Coissac, Jean-Marc
Bonneville
Université Grenoble 1, CNRS, France
116B
Comparison of bacterial numbers and carbon usage patterns in tree root zones
between copper mine tailing sites and control sites in the keweenaw peninsula of
michigan
Timothy Gsell*
Governors State University, USA
117B
Is alginate the only "super-star" among the Pseudomonas putida exopolysaccharides
under water stress?
1
1
2
1
Gamze Gulez* , Arnaud Dechesne , Tim Tolker-Nielsen , Barth F. Smets
1
2
Technical University of Denmark, Denmark, Copenhagen University, Denmark
118B
The role of sugarcane managements on the structuring of fungal communities in soils
1
2
3
Thiago Gumiere* , Ademir Durrer Bigaton , Mayra Camargo Andrade Costa , Fernando Dini
3
Andreote
1
2
ESALQ/USP, Brazil, “Luiz de Queiroz” College of Agriculture/University of São Paulo, Brazil,
3
Queiroz ”College of Agriculture/University of São Paulo, Brazil
103
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
119B
Seeping volcanic CO2 and its effects on freshwater environments
1
1
2
1
Simone Gwosdz* , Ingo Möller , Hans Richnow , Martin Krueger
1
2
Federal Institute for Geosciences and Natural Resources, Germany, Helmholtz Centre for
Environmental Research, Germany
120B
Impact of simulated climate change scenarios on extracellular enzyme activity of soil
microbes
1
2
2
2
3
Verena Hammerl* , Kerstin Grant , Jürgen Kreyling , Anke Jentsch , Karin Pritsch , Michael
3
Schloter
1
2
3
TU München, Germany, University of Bayreuth, Germany, Helmholtz Zentrum München,
Germany
121B
Soil fungal and bacterial communities respond differently to long-term climate change
and their responses are consistent despite seasonal variations in temperature and
water availability
Merian Haugwitz*, Lasse Bergmark, Anders Michelsen, Anders Priemé
University of Copenhagen, Denmark
122B
Effects of free-air CO2 enrichment (FACE) and soil warming on ammonia-oxidizing
bacteria and archaea in flooded paddy soil
Masahito Hayatsu*, Kanako Tago, Takeshi Tokida, Hirofumi Nakamura, Hidemitsu Sakai,
Yasuhiro Usui, Kentaro Hayashi, Toshihiro Hasegawa
National Institute for Agro-Environmental Sciences, Japan
123B
Sub-arctic alpine heath tundra has a more open and bacterial-dominated N cycle than
adjacent mountain birch forest
1
1
2
1
Maria Hellman* , Karina Clemmensen , Anders Michelsen , Sara Hallin
1
2
Swedish University of Agricultural Sciences, Sweden, University of Copenhagen, Denmark
124B
Microbial communities associated with root-knot nematodes in soil
Holger Heuer*, Mohamed Adam, Johannes Hallmann
Julius Kühn-Institute, Germany
125B
Effect of three fungicides on degradation of diuron in tea field soil and impacts on soil
Yu-hua Hsiao*, Zhi-Zhan Li, Jui-Hung Yen
Department of Agricultural Chemistry, National Taiwan University, Taiwan
126B
Diversity of acidophilic actinobacteria in red soils, and genomic characterization of a
novel Streptomyces lineage
1
1
1
2
2
1
Ying Huang , Xiaoxuan Guo* , Xiaoying Rong , Xiaomin Li , Yongsheng Gao , Jisheng Ruan
1
2
Institute of Microbiology, Chinese Academy of Sciences, China, Jiangxi Agricultural
University, China
127B
Metagenomic analysis uncovered novel structure of microbial communities involved in
denitrification in paddy soil
1
1
2
1
1
Hideomi Itoh* , Satoshi Ishii , Yutaka Shiratori , Kenshiro Oshima , Shigeto Otsuka , Masahira
1
1
Hattori , Keishi Senoo
1
2
The University of Tokyo, Japan, Niigata Agricultural Research Institute, Japan
104
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
128B
Shifts in bacterial community structures along xenobiotic contamination gradients in
soils of cold and temperate climates
1
2
3
3
4
Irena Ivshina , Victor Bezel , Tatyana Zhuykova , Valentina Zhuykova , Ludmila Kostina ,
4
1
1
5
Tatyana Kamenskikh , Anastasiya Krivoruchko* , Maria Kuyukina , Lyubov Ogurtsova ,
5
6
Andrey Soromotin , Tatyana Moiseenko
1
Institute of Ecology and Genetics of Microorganisms / Perm State National Research
2
3
University, Russia, Institute of Ecology of Plants and Animals, Russia, Nighny Tagil State
4
Social-Pegagogical Academy, Russia, Institute of Ecology and Genetics of Microorganisms,
5
Russia, Research Institute of Ecology and Natural Resources Managment of Tyumen State
6
University, Russia, Vernadsky Institute of Geochemistry and Analytical Chemistry, Russia
129B
Drying and rewetting events affecting the fate of sulfadiazine in rhizosphere soil and its
effects on sul gene abundance
1
2
3
2
4
Sven Jechalke* , Ingrid Rosendahl , Joost Groeneweg , Jan Siemens , Viviane Radl , Holger
1
1
Heuer , Kornelia Smalla
1
2
Julius Kühn-Institut-Federal Research Centre for Cultivated Plants (JKI), Germany, Institute
of Crop Science and Resource Conservation, Soil Science and Soil Ecology, University of
3
Bonn, Germany, Institute of Bio- and Geosciences, Agrosphere, Forschungszentrum Jülich
4
GmbH, Germany, Helmholtz Zentrum München, German Research Center for Environmental
Health, Germany
130B
Towards defining bio-indicateurs of arsenic mobility in soils
Catherine Joulian*, Jennifer Harris-Hellal, Anne Mercier, Valerie Laperche, Francis Garrido,
Fabienne Battaglia-Brunet
French geological survey (BRGM), France
131B
Diversity and abundance of nitrous oxide reductase genes associated with
Bacteroidetes in organic compound-rich soils
1
1
1
1
2
1
Jaejoon Jung* , Jaemin Noh , Sungjong Choi , Hoon Jung , Kate Scow , Woojun Park
1
2
Korea University, South Korea, University of California, Davis, United States
132B
Effect of aeration and high efficiency microorganisms in controlling emissions and
pathogen outbreak from mortality disposal system: a bench-scale study of in-vessel
stabilization of carcass digestion
1
1
2
3
Md. ANirban Jyoti* , Sang-Seob Lee , Weon-Wha Jeong , John J. Bang
1
2
Kyonggi University, South Korea, Environmental Infrastructure Research Department Water
Supply & Sewerage Research Division, National institute of Environmental Research, South
3
Korea, Department of Environmental, Earth and Geospatial Science, North Carolina Central
University, USA
133B
Soil fungal communities and enzyme activities in a sandy, highly weathered tropical
soil treated with biochemically contrasting organic residues
1
1
1
2
Bhanudacha Kamolmanit , Patma Vityakon , Wanwipa Kaewpradit , Georg Cadisch , Frank
2
Rasche*
1
Khon Kaen University/Department of Plant Science and Agricultural Resources, Thailand,
2
University of Hohenheim/Institute of Plant Production and Agroecology in the Tropics and
Subtropics, Germany
134B
Response of soil microbial community against pulse perturbation by aromatic
pollutants
1
2
3
4
1
Hiromi Kato* , Hiroshi Mori , Fumito Maruyama , Atsushi Toyoda , Yoshiyuki Ohtsubo , Genki
1
1
2
5
1
6
Fuchu , Ryo Endo , Ayumi Dozono , Masatoshi Miyakoshi , Yuji Nagata , Asao Fujiyama ,
2
1
Ken Kurokawa , Masataka Tsuda
1
2
3
Tohoku University, Japan, Tokyo Institute of Technology, Japan, Tokyo Medical and Dental
4
5
University, Japan, National Institute of Genetics, Japan, University of Würzburg, Germany,
6
National Institute of Informatics, Japan
105
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
135B
The soil metaproteome of two different soil samples - a comparison of protein
extraction protocols
1
2
3
3
Katharina Maria Keiblinger* , Ines C Wilhartitz , Thomas Schneider , Leo Eberl , Katharina
4
5
Riedel , Sophie Zechmeister-Boltenstern
1
2
University of Natural Resources and Life Sciences, Austria, Eawag, Department of
3
Environmental Microbiology, Switzerland, University of Zurich, Institute of Plant Biology,
4
5
Switzerland, Institute of Microbiology, University of Greifswald, Germany, Institute for Soil
Research, Department of Forest and Soil Sciences, University of Natural Resources and Life
Sciences (BOKU), Austria
136B
Controls on the function and genetic diversity of the coupled processes of nitrification
and denitrification in tributary sediments
1
2
2
2
Haryun Kim* , A. Ogram , K. R. Reddy , H. Bae
1
2
BioEMCo, CNRS, France, University of Florida, United States
137B
Metatranscriptome analysis of microbial community in flooded rice microcosm
Yongkyu Kim*, Werner Liesack
Max Planck Institute for terrestrial microbiology, Germany
138B
Methanol consumption by methylotrophs is correlated with vegetation type, pH, and
substrate concentration in aerated soils
Steffen Kolb*, Astrid Stacheter, Harold L. Drake
University of Bayreuth, Germany
139B
Organic matter decomposition: feedbacks on plant and microbial community structure
Jan Kopecky*, Veronika Hrdinkova, Marketa Sagova-Mareckova
Crop Research Institute, Czech Republic
140B
Metabolic potential of pesticide-contaminated soils revealed with deep sequencing and
metagenomic analysis
1
2
2
1
Pawel Krawczyk* , Marcin Golebiewski , Marcin Ostajewski , Dorota Tokarska , Michal
3
1
3
1
1
Kaminski , Adamska Dorota , Marta Blaszkiewicz , Adam Sobczak , Leszek Lipinski , Andrzej
1
Dziembowski
1
2
Institute of Biochemistry and Biophysics PAS, Poland, Department of Biotechnology,
3
Nicolaus Copernicus University, Poland, Institute of Genetics and Biotechnology, University
of Warsaw, Poland
141B
Effects of quality and quantity of plant-derived organic substrates on the fungal
communities present in an arable soil
Dirk Krüger*, Julia Moll, Björn Hoppe, Kezia Goldmann, François Buscot
Helmholtz Centre for Environmental Research - UFZ, Germany
142B
Phytase producing bacteria from Himalayan soil and their tricalcium phosphate
solubilizing abilities
1
1
2
1
1
Vinod Kumar* , Prashant Singh , Punesh Sangwan , A. K. Verma , Sanjeev Agrawal
1
2
G.B. Pant University of Agriculture and Technology, Pantnagar, India, C.C.S. Haryana
Agriculture University, Hisar, India
143B
Characterization of Microbial communitites in sub-surface flow constructed wetlands of
United Arab Emirates
Rajkumari Kumaraswamy*, Rahsed Algaoud, Jorge Rodríguez
Masdar Institute of Science and Technology, United Arab Emirates
144B
Combined impacts of climate changes and anthropogenic activities on dryland soil
microbiota of the Southwest United States
1
1
1
2
2
Cheryl Kuske* , Blaire Steven , Chris Yeager , Jayne Belnap , Sasha Reed
1
2
Los Alamos National Laboratory, USA, United States Geological Survey, USA
106
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
145B
Cell abundance and microbial community composition over a complete oil sand mining
and recultivation process
Michael Lappé*, Beate Schneider, Jens Kallmeyer
University of Potsdam / Institute of Earth and Environmental Science, Germany
146B
A comparative study of the microbial ecology of burnt and unaffected soil in a firedamaged upland heath
Michael Larkin*, Christopher Allen, Leonid Kulakov, Anna Kulakova, Alessandra Frau, Roisin
Grimes, Holly Clements, Prasanna Pentlvalli
Queen's University Belfast, United Kingdom
147B
Combination of culture-independent and dependent approach reveals positive
correlation between abundance of Beta-proteobacteria and mineral weathering in
nutrient-poor forest soil
1
2
3
4
Cendrella Lepleux* , Marie-Pierre Turpault , Philippe Oger , Pascale Frey-Klett , Stéphane
4
Uroz
1
2
INRA - UMR 1136 - IAM team, France, INRA - UR 1138 - Biogeochemistry of Forest
3
4
Ecosystems, France, CNRS - UMR5570 - Earth Science Laboratory, France, INRA UMR1136 - Tree microbes Interactions, France
148B
Dissolved organic carbon influences microbial community composition and diversity in
managed aquifer recharge systems
1
2
3
1
Dong Li* , Jörg Drewes , Jonathan Sharp , Mazahirali Alidina
1
2
King Abdullah University of Science and Technology, Saudi Arabia, Water Reuse and
Desalination Center (WDRC), King Abdullah University of Science and Technology, Saudi
3
Arabia, NSF Engineering Research Center ReNUWIt, Civil and Environmental Engineering,
Colorado School of Mines, USA
149B
Combined effects of hypoxia and polybrominated diphenyl ethers on microbial
communities in surface marine sediment
Laam Li*, Singaram Gopalakrishnan, Yuki Y.K. Chan, Jill M.Y. Chiu, Rudolf S.S. Wu
The University of Hong Kong, Hong Kong
150B
Molecular cloning, expression, and biochemical characterization of a cellulase from
Streptomyces coelicolor A3(2)
1
1
1
1
1
Ju Hyeon Lim* , Da Yeon Park , Xuemei Jin , Won-Jae Chi , Jae Seon Park , Yong-Keun
2
1
Chang , Soon-Kwang Hong
1
2
Department of Biological Science, Myongji University, South Korea, Department of Chemical
and Biomolecular Engineering, KAIST, South Korea
151B
Effect of amending green manures and herbicide pendimethalin on soil microbial
communities
Chien-Liang Liu*, Fang-Yu Hsu, Jui-Hung Yen
Department of Agricultural Chemistry, National Taiwan University, Taiwan
152B
Abundance and community composition of sulfate-reducing prokaryotes in paddy soils
around a Chinese mercury mining area
Yu-Rong Liu*, Li-Mei Zhang, Yuan-Ming Zheng, Ji-Zheng He
Research Center for Eco-Environmental Sciences,Chinese Academy of Sciences, China
107
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
153B
Autothermal thermophilic sludge addition modifies soil bacterial communities and
promotes plant development
1
1
1
2
2
Eva Lloret* , Marta Goberna , Josefa Blaya , Nicholas J, Bouskill , Ulas Karaoz , José A.
1
2
Pascual , Eoin L. Brodie
1
2
CEBAS-CSIC, Spain, Lawrence Berkeley National Laboratory, USA
154B
Microbial communities in organically farmed rice fields: the influence of the crop
rotation stage
1
2
2
2
Ana Lopes* , Diana Bello , Ángeles Prieto-Fernández , Carmen Trasar-Cepeda , Fernando
3
3
4
1
Gil-Sotres , Maria Leirós , Célia Manaia , Olga Nunes
1
2
Universidade do Porto - Faculdade de Engenharia, Portugal, Dpto Bioquímica del Suelo,
3
IIAG-CSIC, Spain, Dpto Edafoloxía e Química Agrícola, Facultade de Farmacia, Universidade
4
de Santiago de Compostela, Spain Escola Superior de Biotecnologia, Universidade Católica
Portuguesa, Portugal
155B
Diversity of soil fungi in the north slope forest of Changbai Mountain Natural Reserve
1
1
1
1
2
2
Guozhong Lu* , Xiaodong Sun , Zhihui Zhao , Hong Yang , Wenshuang Xiu , Shuyuan Lu ,
2
Hua Jiang
1
2
Dalian Nationalities University, China, Liaoning Normal University, China
156B
Soil microbial community responses to elevated temperatures as revealed by
comparative metagenomics
1
2
2
2
2
2
2
Chengwei Luo , Liyou Wu , Lei Cheng , Kai Xue , Qichao Tu , Ye Deng , Sherry Rebecca ,
2
2
2
3
4
5
2
Dejun Li , Zhili He , Yiqi Luo , Edward Schuur , Patrick Chain , James Tiedje , Jizhong Zhou ,
1
Konstantinos Konstantinidis*
1
2
3
Georgia Institute of Technology, USA, University of Oklahoma, USA, University of Florida,
4
5
USA, Los Alamos National Laboratory, USA, Michigan State University, USA
157B
Physiological and molecular responses to water stress of a polycyclic aromatic
hydrocarbons degrading bacteria isolated from Patagonian soil
1
1
1
2
Laura Madueño* , Bibiana Coppotelli , Irma Morelli , Hector Alvarez
1
2
Universidad Nacional de la Plata / CINDEFI, Argentina, Universidad Nacional de la
Patagonia San Juan Bosco / CRIDECIT, Argentina
158B
Diversity of populations of P-solubilising bacteria is related to soil P status
1
1
1
2
1
Carolyn Mander* , Sandra Young , Steve Wakelin , Leo Condron , Maureen O'Callaghan
1
2
AgResearch Ltd, New Zealand, Lincoln University, New Zealand
159B
Evaluation of temporal changes in soil quality indicators in Table grape (Thompson
seedless) under organic amendment applications using Chilean natural ecosystems as
base line
1
2
3
Maria Mercedes Martinez –Salgado* , Marc Ortega , Janssens Marc
1
University Federico Santa Maria, Chile- CATA/ University of Bonn/ Horticulture Institute,
2
3
Germany, Federico Santa Maria University / CATA, Chile, University of Bonn, Germany
160B
Methanogenic archaea communities in microtopographic gradients in three
Scandinavian peatlands receiving different levels of nitrogen deposition and its relation
with the above ground vegetation
1
2
1
1
Magalí Martí Generó* , Bjorn J.M. Robroek , Per-Eric Lindgren , Bo H Svensson
1
2
Linköpings Universitet, Sweden, Utrecht University, Netherlands
161B
Real Time Quantification of 16SrRNA gene copies in Brazilian Spodosols
Elisa Matos*, Emiliana Romagnoli, Marcio Lambais
Escola Superior de Agricultura Luiz de Queiróz - USP, Brazil
108
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
162B
The use of natural Mn oxide-coated sands as a remediation amendment for Pb
contaminated soils: effects on soil microbial activity and community structure
1
1
1
1
2
Clare McCann* , Matthew Wade , Neil Gray , Russell Davenport , Karen Hudson-Edwards ,
3
Karen Johnson
1
2
3
Newcastle University, United Kingdom, University of London, United Kingdom, Durham
University, United Kingdom
163B
The rhizosphere effect on the bacterial taxonomic and metabolic diversity in soybean
crop field from Brazilian Amazonian region
1
2
1
Lucas William Mendes* , Eiko Eurya Kuramae , Acácio Aparecido Navarrete , Johannes A
2
1
van Veen , Siu Mui Tsai
1
2
Center for Nuclear Energy in Agriculture - University of Sao Paulo, Brazil, Netherlands
Institute of Ecology NIOO-KNAW, Netherlands
164B
Investigating the response of soil nitrifiers to organic and inorganic ammonia sources
Yiyu Meng*, Graeme Nicol, James Prosser
University of Aberdeen, United Kingdom
165B
Exploring the microbe-mediated soil H2 sink: A lab-based study of the physiology and
related H2 consumption of isolates from Harvard Forest
1
1
1
1
1
2
Laura Meredith* , Deepa Rao , Kelden Pehr , Tanja Bosak , Shuhei Ono , Colleen Hansel ,
1
Ronald Prinn
1
2
Massachusetts Institute of Technology, USA, Harvard University, USA
166B
Combined rRNA versus rRNA gene approach in the evaluation of long-term soil
contamination effects on prokaryotic communities
Anu Mikkonen*, Minna Santalahti, Kaisa Lappi, Anni-Mari Pulkkinen, Leone Montonen, Leena
Suominen
University of Helsinki, Finland
167B
Novel micro-scale [ H]leucine incorporation assay reveals heterogeneous distribution
of co-selected antibiotic resistance in Cu contaminated soil
Jakub Modrzynski*, Kristian Brandt, Jeanette Berg, Ole Nybroe
University of Copenhagen, Denmark
168B
Impact of soil bioturbation by earthworms on Aphanomyces oospore spreading and
colonisation power
1
2
3
Cécile Monard* , Jan Lagerlöf , Jan Stenlid
1
2
Swedish University of Agricultural Sciences, Sweden, SLU - Department of Ecology,
3
Sweden, SLU - Department of Forest Mycology and Plant Pathology, Sweden
169B
Phenanthrene's degradation in latosol: effect of contaminant's concentration and the
addition of surfactin
Daniel Morais*, Julia Barros, Marcos Tótola
Universidade Federal de Viçosa, Brazil
170B
Mitigation of N2O emission from agricultural soil by utilizing N2O-reducing denitrifiers
(I): screening of potent N2O-mitigating strains
1
1
2
3
1
Tomoyasu Nishizawa* , Aihua Quan , Kanako Tago , Satoshi Ishii , Kazuo Isobe , Shigeto
1
1
Otsuka , Keishi Senoo
1
2
Graduate School of Agricultural and Life Sciences, The University of Tokyo, Japan, National
3
Institute for Agro-Environmental Sciences, Japan, School of Engineering Hokkaido University,
Japan
171B
The detection of benzene-assimilating bacteria in methanogenic enrichment culture
originated from river sediment using Stable Isotope Probing
Mana Noguchi*, Futoshi Kurisu, Ikuro Kasuga, Hiroaki Furumai
The University of Tokyo, Japan
3
109
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
172B
Development of molecular tools to study denitrifying fungi from soil
1
2
2
3
2
Amy Novinscak* , Claudia Goyer , Bernie Zebarth , David Burton , Martin Chantigny , Martin
1
Filion
1
2
3
Université de Moncton, Canada, Agriculture and Agri-Food Canada, Canada, Nova Scotia
Agricultural College, Canada
173B
Impact of MCPA in nitrogen mineralization and urease activity in andisoil soil
1
1
1
1
1
Evelyn Padilla* , Graciela Palma , Paula Cartes , Rolando Demanet , Milko Jorquera , María
1
de la Luz Mora
1
Universidad de La Frontera, Chile
174B
In situ nitrate, pH, and temperature control denitrifier community composition and N2O
emissions from northern peatlands
Katharina Palmer*, Marcus Horn
University of Bayreuth, Department of Ecological Microbiology, Germany
175B
Purification and biochemical characterization of a novel xylanase produced by Bacillus
sp. MX47, a soil-borne isolate
1
1
1
2
1
Da Yeon Park* , Ju-hyeon Lim , Won-Jae Chi , Yong-Keun Chang , Soon-Kwang Hong
1
2
Department of Biological Science, Myongji University, South Korea, Department of Chemical
and Biomolecular Engineering, KAIST, South Korea
176B
Seasonal changes of nitrogen-cycle genes abundances and bacterial communities in
acidic forest soils
Woojun Park*, Jaejoon Jung, Jinki Yeom, Jiwon Han, Jisun Kim
Korea University, South Korea
177B
Assessing the soil fungal diversity using Illumina sequencing of the internal
transcribed spacer region
1
2
3
2
1
Eric Pinto* , Erika Yashiro , Helene Hirzel , Jan Roelof van der Meer , Antoine Guisan
1
2
University of Lausanne / Department of Ecology and Evolution, Switzerland, University of
3
Lausanne / Department of Fundamental Microbiology, Switzerland, Centre hospitalier
universitaire vaudois, Switzerland
178B
Evaluation of the ISO standard 11063 "Soil DNA extraction procedure" for assessing
microbial abundance and community structure
1
1
2
2
1
Pierre Plassart* , Sébastien Terrat , Robert Griffiths , Bruce Thomson , Samuel Dequiedt ,
1
1
2
1
3
Mélanie Lelièvre , Tiffanie Régnier , Mark Bailey , Laurent Philippot , Antonio Bispo , Pierre1
1
1
1
Alain Maron , Christophe Mougel , Philippe Lemanceau , Lionel Ranjard
1
2
3
INRA - UMR1347 Agroecologie, France, CEH, United Kingdom, ADEME, France
179B
Are plant biodiversity and microbial diversities tightly linked? A case study of
grassland manipulated plots and denitrifying bacteria
Thomas Pommier*, Lamia El Moujahid, Xavier Le Roux, Floriant Bellvert, Michalet Serge,
Franck Poly
UMR5557 CNRS - USC INRA 1193, France
180B
The biofumigation effect of Brassica napus on soil microbial communities
Clarissa Potgieter, Misha de Beer, Sarina Claassens*
North-West University, South Africa
181B
Microbiological indicators of restoration succession of forestry-drained peatlands
1
2
3
1
1
Anuliina Putkinen* , Heli Juottonen , Eeva-Stiina Tuittila , Krista Peltoniemi , Anne Tolvanen ,
1
2
1
Tero Tuomivirta , Kim Yrjälä , Hannu Fritze
1
2
3
Finnish Forest Research Institute, Finland, University of Helsinki, Finland, University of
Eastern Finland, Finland
110
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
182B
Bioprospecting of biosurfactant-producing bacteria in Trindade Island soils
Victor Pylro*, Fábio da Silva, Gisely Barcelos, Carlos Schaefer, Marcos Tótola
Federal University of Viçosa, Brazil
183B
A comparative study of microbial responses to an aromatic pollutant (anthracene) in
Pinus halepensis litters from Mediterranean coastal and inland areas
Leila Qasemian*, Daniel Guiral, Anne-Marie Farnet
Mediterranean Institute of marine and terreastrial Biodiversity and Ecology, UMR CNRS 7263IRD 273, Marseille France, France
184B
Selection of highly specialized microbial communities in Biological Sand Filters
treating Acid Mine Drainage
1
2
3
4
Jean-Baptiste Ramond* , Pamela J Welz , Don A Cowan , Stephanie G Burton , Marla I
1
Tuffin
1
Institute for Microbial Biotechnlogy and Metagenomics (IMBM), University of the Western
2
Cape, South Africa, Biocatalysis and Technical Biology Research Group, Cape Peninsula
3
University of Technology, South Africa, Department of Genetics, University of Pretoria, South
4
Africa, University of Pretoria, South Africa
185B
Impact of crop rotation and fertilization on free-living diazotrophs in wheat rotations
Kate Reardon*, Hero Gollany
USDA-ARS, United States
186B
Changes in soil microbial activities under conservation agricultural practices in South
African maize production
1
1
2
Owen Rhode , Andre Nel* , Carlos Bezuidenhout
1
2
Agricultural Research Council-Grain Crops Institute, South Africa, Faculty of Natural
Sciences, Unit of Environmental Sciences and Management, North–West University
(Potchefstroom Campus), South Africa
187B
Selection of enzymes for the development and validation of multi-enzymatic indicators
of agricultural soil quality
1
1
2
2
3
4
1
5
Wassila Riah* , J Trap , N Cheviron , C Mougin , S Criquet , S Houot , M Legras , J. F Vian ,
6
6
6
7
1
1
A Bispo , C Grand , L Galsomies , G Peres , K Laval , I Trinsoutrot-Gattin
1
2
Engineering school in agriculture esitpa, biosol, France, PESSAC, INRA de Versailles3
4
Grignon, France, IMEP UMR CNRS 6116, France, UMR Environnement et Grandes
5
6
7
Cultures, INRA de Versailles, France ISARA-Lyon, France ADEME, France University
Rennes, UMR CNRS France
188B
Metagenomic investigation of metal and antimicrobial co-resistance of prolonged
copper exposed soil
Michael Roggenbuck*, Lars H Hansen, Søren J. Sørensen
University of Copenhagen, Denmark
189B
Action of antimicrobial substances produced by Streptomyces sp. 235 against a biofilm
of Desulfovibrio alaskensis NCIMB 13491
Juliana Rosa, Elisa Korenblum, Fernanda Abreu, Ulysses Lins, Lucy Seldin, Rosalie Coelho*
Universidade Federal do Rio de Janeiro, Brazil
190B
Warming altered the effects of grazing on nitrogen-associated functional gene
abundance in an alpine meadow of the Tibet Plateau, China
1
1
2
3
1
Yichao Rui* , Zhihong Xu , Yanfen Wang , Shiping Wang , Chengrong Chen
1
2
Griffith University, Australia, Graduate University of Chinese Academy of Sciences,
3
China, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, China
111
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
191B
Mineralogy contributes to heterogeneous bacterial sediment communities
1
2
1
Wilfred Röling* , Egija Zaura , Susana Direito
1
2
VU University Amsterdam, Netherlands, Academic Centre for Dentistry Amsterdam (ACTA),
Netherlands
192B
Nitrifying community in permafrost-affected soils on Samoylov Island in the Lena River
Delta, Siberia
1
2
2
3
Tina Sanders* , Claudia Fiencke , Eva Maria Pfeiffer , Eva Spieck
1
2
Helmholtz Zentrum Geesthacht, Germany, University of Hamburg, Institute for soil sience,
3
Germany, University of Hamburg, Germany
193B
Interactions of the herbicide simazine and microbial communities in agricultural soils
1
1
1
1
1
2
Michael Seeger* , Marcela Hernandez , V Morgante , C Flores , M González , Z Jia , R
2
Conrad
1
2
Universidad Tecnica Federico Santa Maria, Chile, Max-Planck Institute for Terrestrial
Microbiology, Marburg
194B
Improvement of the detection of alkane monooxygenase AlKB genes in cultivated
bacteria and in environmental samples using a combination of alkB primers
Lucy Seldin, Diogo Jurelevicius*, Vanessa Alvarez, Raquel Peixoto, Alexandre Rosado
Universidade Federal do Rio de Janeiro (UFRJ), Brazil
195B
Comparison of DNA extraction methods for soil Actinobacteria
1
2
3
Angelica Serrano Vázquez* , Horacio Pérez-Juárez , Salvador Rodríguez-Zaragoza , Víctor
3
3
Manuel Rivera-Aguilar , Jesus Bazán-Cuenca
1
2
Universidad Nacional Autónoma de México, Mexico, Doctorado en Ciencias Biomédicas,
3
UNAM. Instituto de Ecología, UNAM, Mexico, Facultad de Estudios Superiores-Iztacala,
UNAM, Mexico
196B
Biological soil crusts from Tehuacan Valley, Puebla, Mexico
1
2
2
Angelica Serrano Vázquez* , Salvador Rodríguez-Zaragoza , Hector Godinez , Angélica
3
4
2
Serrano-Vázquez , Horacio Pérez-Juárez , Jesús Bazán-Cuenca
1
2
Universidad Nacional Autónoma de México, Mexico, Facultad de Estudios Superiores3
Iztacala, UNAM, Mexico, Posgrado en Ciencias Biológicas, UNAM. Facultad de Estudios
4
Superiores-Iztacala, UNAM, Mexico, Doctorado en Ciencias Biomédicas, UNAM. Intituto de
Ecología, UNAM, Mexico
197B
Genetic and physiological structures of bacterial communities in agricultural soil
irrigated with untreated wastewater for more than 40 years
Tianlin Shen*, Jiulan Dai, Renqing Wang
Shandong University, China
198B
Impact of soil fertilization with "alpeorujo" transformed by Coriolopsis rigida on
culturable bacterial communities
1
2
2
Jose Antonio Siles Martos* , Javier Pascual , Victor González-Menéndez , Inmaculada
1
1
2
Sampedro , Inmaculada García-Romera , Gerald Bills
1
2
Estación Experimental del Zaidín (CSIC), Spain, Fundación MEDINA, Spain
199B
The role of diversity in microbial degradation of pentachlorophenol
1
2
2
1
Aki Sinkkonen* , Tomasz Płociniczak , Magdalena Pacwa-Plociniczak , Sara Ollila , Martin
1
Romantschuk
1
2
University of Helsinki, Finland, University of Silesia, Poland
200B
Site, soil depth or management - what matters for arable soil microbial communities?
1
1
2
3
Timo Sipilä , Kim Yrjälä , Laura Alakukku , Ansa Palojärvi*
1
2
University of Helsinki, Department of Biosciences, Finland, University of Helsinki,
3
Department of Agricultural Sciences, Finland, MTT Agrifood Research Finland, Finland
112
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
201B
Barley root exudates influence community structure of ammonia oxidisers and
nitrification rates in soil
1
1
2
1
Marcin Skiba* , Timothy George , Elizabeth Baggs , Tim Daniell
1
2
The James Hutton Institute, United Kingdom, University of Aberdeen, United Kingdom
202B
Rainfall events rapidly affect extracellular enzyme production and microbial biomass in
forest soil
Jaroslav Snajdr*
Institute of Microbiology of the ASCR, Czech Republic
203B
Changes of soil microbial communities in Rhizosphere of GM and wild type corn
Hong-Gyu Song*, Hwa-Young Lee
Kangwon National University, South Korea
204B
Comparison of soil microbial communities in Rhizosphere of GM and wild type corn by
DGGE
Hong-Gyu Song*, Nam-Mi Park
Kangwon National University, South Korea
205B
Microbial community From Deep Soil Volatile Organic Compound Contaminated Site,
Rayong province
Manatsawat Sriwichai*, Sakunnee Bovonsombut
Dept. of Biology, Thailand
206B
Study of bacterial diversity in an agricultural soil
Aurore Stroobants*, Bernard Bodson, Daniel Portetelle, Micheline Vandenbol
Gembloux Agro Bio-Tech - ULg, Belgium
207B
Impact of depth and soil compaction on bacterial diversity in soil
1
1
2
2
1
Aurore Stroobants* , Florine Degrune , Claire Olivier , Christian Roisin , Bernard Bodson ,
1
1
Daniel Portetelle , Micheline Vandenbol
1
2
Gembloux Agro Bio-Tech - ULg, Belgium, Centre wallon de Recherches
agronomiques, Belgium
208B
Quantification of metal resistance genes in sedimentary bacterial populations
1
2
1
1
Roosa Stéphanie* , Gabriel Billon , Ruddy Wattiez , David Gillan
1
2
University of Mons, Belgium, Laboratoire de géosystèmes, France
209B
Consequences of tree dieback caused by bark beetle outbreak on the structure and
function of soil fungal community in a coniferous forest soil
Martina Štursová*, Jaroslav Šnajdr, Petr Baldrian
Institute of Microbiology AS CR, v.v.i., Czech Republic
210B
Inhibition effect of aluminum complex on soil bacteria at neutral pH condition
1
1
1
2
2
Koichi Suto* , Yasuyuki Namioka , Chihiro Inoue , Shinichi Miura , Masato Yamaguchi
1
2
Tohoku University, Japan, Yoshino Gypsum Co., Ltd, Japan
211B
Diversity of insecticide-degrading Burkholderia in sugarcane field soils - The
Burkholderia symbionts which confer insecticide resistance on stinkbugs live in soil 1
2
3
2
1
Kanako Tago* , Yoshitomo Kikuchi , Atsushi Nagayama , Tomoyuki Hori , Masahito Hayatsu
1
2
National Institute for Agro-Environmental Sciences, Japan, National Institute of Advanced
3
Industrial Science and Technology, Japan, Okinawa Prefectural Agricultural Research
Center, Japan
212B
Bioremediation of multicontaminated soil in microcosm and batch bioreactor: a
bacterial community study
1
2
1
3
4
1
Natalia Taketani* , Rodrigo Taketani , Andrea Rizzo , Siu Tsai , Selma Leite , Claudia Cunha
1
2
3
4
CETEM / MCT, Brazil, EMBRAPA, Brazil, CENA / USP, Brazil, EQ / UFRJ, Brazil
113
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
213B
Carbon biosequestration potential and microbial stimulation by pyrolized carbon
(Biochar) in soil
Neslihan Tas*, Cristina Castanha, Ken Reichl, Marc Fischer, Margaret Torn, Janet Jansson
Lawrence Berkeley National Laboratory, JGI, JBEI, United States
214B
Changes in soil microbial community and nitrogen cycling in mixed plantations of
Eucalyptus urograndis and Acacia mangium culminates in soil nitrate increase
1
2
1
Caio Tavora Coelho da Costa Rachid* , Fabiano de Carvalho Balieiro , Raquel Silva Peixoto ,
3
2
1
Marisa de Cassia Piccolo , Guilherme Montandon Chaer , Alexandre Soares Rosado
1
2
3
Universidade Federal do Rio de Janeiro, Brazil, Embrapa, Brazil, Universidade de São
Paulo, Brazil
215B
Polycyclic aromatic hydrocarbons degradation and effects on soil microbial
communities
1
1
1
1
Isabelle Trinsoutrot Gattin* , Nadia Laurent , Caroline Dubois , Lisa Castel , Marthe Akpa2
1
3
1
2
Vinceslas , Christophe Gangneux , Florence Portet-Koltalo , Isabelle Gattin , Fabrice Bureau ,
1
Marc Legras
1
Unité Agri'Terr laboratoire BioSol, Esitpa- Ecole d'ingénieurs en
2
3
Agriculture, France, Laboratoire d'écologie Upres-Ea Ecodiv, France, UMR 6014
COBRA, France
216B
Microbial biomass and enzyme activities in soils along a chronosequence in temperate
rainforest of New Zealand
1
2
2
1
Stephanie Turner* , Robert Mikutta , Georg Guggenberger , Axel Schippers
1
2
Bundesanstalt für Geowissenschaften und Rohstoffe, Germany, Leibniz Universität
Hannover, Institut für Bodenkunde, Germany
217B
The effect of seven different vegetation types on the composition of the litter and soil
microbial community
Michaela Urbanova*, Jaroslav Snajdr, Petr Baldrian
Institute of Microbiology, Academy of Sciences of the Czech Republic, Czech Republic
218B
Microbial functional diversity and stability of soil decomposition activity
1
2
3
Masayuki Ushio* , Takeshi Miki , Teri C. Balser
1
2
3
Kyoto University, Japan, National Taiwan University, Taiwan, The University of Florida, USA
219B
A survey on the occurrence of dermatophytes in recreational beach sand
1
2
1
2
A. Velegraki , M.A. Efstratiou , M. Arabatzis , Panayiota Prodromou*
1
2
Mycology Lab, Dept of Microbiology, Medical School, Univ of Athens, Greece, University of
Aegean
220B
Role of the Agr communication system in adaptation of Listeria monocytogenes
populations to soil
Anne-Laure Vivant*
INRA, France
221B
Transformation of polysaccharides and phenolic compounds by soil actinobacteria
1
2
1
Tomáš Větrovský* , Kari Steffen , Petr Baldrian
1
2
Institute of Microbiology AS CR, Czech Republic, University of Helsinki, Finland
222B
Iron-oxidizers in bacterial colonies formed on surface of paddy soil
1
1
2
3
1
Takeshi Watanabe* , Susumu Asakawa , Hiroaki Sumida , Do Minh Nhut , Katsuya Yano ,
4
Makoto Kimura
1
2
3
Nagoya University, Japan, Nihon University, Japan, Kien Giang Agriculture Extension
4
Center, Viet Nam, Northeast Institue of Geography and Agroecology, Chinese Academy of
Sciences, China
114
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
223B
Microbial community structure of reintroduced native foraging animal pits in arid
Australia
1
2
1
1
Ivan Wong* , David Eldridge , Mark Brown , Brett Neilan
1
Biotechnology and Biomolecular Sciences, University of New South
2
Wales, Australia, Biological, Earth and Environmental Sciences, University of New South
Wales, Australia
224B
Isolation and characterization of octachlorinated dibenzofuran-degrading bacteria from
dioxins-contaminated soil
Jer-Horng Wu, Wei-Yu Chen*
National Cheng Kung University, Taiwan
225B
The impacts of vinclozolin on soil microbial population
Yun-Hsuan Wu*, Chung-Ting Lu, Yu-Kai Chin, Jui-Hung Yen
Department of Agricultural Chemistry, National Taiwan University, Taiwan
226B
Examination of the biases in soil bacterial and archaeal community analysis using
paired-end Illumina sequencing
Erika Yashiro*, Eric Pinto, Jan van der Meer
University of Lausanne, Switzerland
227B
Differential responses of experimental warming on soil microbial communities between
two ecosystems
1
1
1
1
1
1
1
Mengting Yuan* , Lei Cheng , Liyou Wu , Zhili He , Ye Deng , Kai Xue , Tong Yuan , Joy Van
1
2
1
3
1
Nostrand , Edward Schuur , Yiqi Luo , James Tiedje , Jizhong Zhou
1
Institute for Environmental Genomics and Department of Microbiology and Plant Science,
2
3
University of Oklahoma, USA, Department of Biology, University of Florida, USA, Center for
Microbial Ecology, Michigan State University, USA
228B
Partitioning of methane production in rice field soil into rice straw, soil and rice root
organic matter
Quan Yuan*, Judith Pump, Ralf Conrad
Max Planck Institute for Terrestrial Microbiology, Germany
229B
Microorganisms’ characterizarion from four mine tailings
1
1
2
Gisela Yupanqui* , Alvarino Bustamante , Miryam More
1
2
Universidad Nacional Federico Villarreal, Peru, San Martin de Porres University, Peru
230B
Tolerance evaluations of rhizospheric actinomycetes to lead growing in vitro
Francisco Javier Zavala Diaz de la Serna*, Rosario Peralta-Perez, Pamela E. Silva-Escalante,
Guadalupe Virginia Nevarez-Moorillon, Quintin Rascón-Cruz
Universidad Autonoma de Chihuahua/Facultad de Ciencias Quimicas, Mexico
231B
Degradation and detoxification of trichothecene mycotoxins by soil bacteria
Ting Zhou*
Agriculture & Agri-Food Canada -Guelph Food Research Center, Canada
232B
Anaerobic methane oxidization in peat ecosystems: enrichment and characterization of
new nitrite dependent methane-oxidizing bacteria
1
2
2
2
3
3
Baoli Zhu* , Gijs van Dijk , Christian Fritz , Fons Smolders , Mike Jetten , Katharina Ettwig
1
2
Radboud University Nijmegen, Netherlands, Department of Ecology, Radboud University
3
Nijmegen, Netherlands, Department of Microbiology, Department of Ecology, Netherlands
115
PS16 – Soil Microbiology and Heterogeneity
Tuesday 21 August
PS17 – The Starving Majority; life at low energy flux
233B
Quantification of total microbial activity in subsurface sediments using a tritium-based
hydrogenase enzyme assay
Rishi Ram Adhikari*, Jens Kallmeyer
University of Potsdam, Institute of Earth and Environmental Sciences, Germany
234B
4-chloro-2-methylphenoxyacetic acid concentration and additional carbon source
determine the measured centimetre-scale vertical variability of mineralization potential
around the groundwater table
Meriç Batıoğlu-Pazarbaşı*, Sebastian R. Sørensen, Jens Aamand
Geological Survey of Denmark and Greenland / Department of Geochemistry, Denmark
235B
Microbiology of deep stratified sediments on the New Jersey shallow shelf (IODP Exp.
313)
Anja Breuker, Susanne Stadler, Axel Schippers*
Federal Institute for Geosciences and Natural Resources (BGR), Germany
236B
Identification of organisms involved in methanogenic toluene biodegradation using
stable isotope probing
1
2
1
1
Jane Fowler* , Maria-Luisa Gutierrez-Zamora , Xiaoli Dong , Christoph W. Sensen , Mike
2
1
Manefield , Lisa Gieg
1
2
University of Calgary, Canada, Centre for Marine Bio-Innovation, UNSW, Australia
237B
In Caulobacter crescentus, the artificial production of the alarmone (p)ppGpp retards
cell differenciation and initiation of chromosome replication
Diego Gonzalez*, Justine Collier
Department of Fundamental Microbiology, Switzerland
238B
Enrichment and characterization of high- and low-affinity herbicide-degrading bacteria
from a groundwater aquifer
1
2
1
2
3
Erkin Gozdereliler* , Nico Boon , Jens Aamand , Karen De Roy , Michael Granitsiotis , Hans4
1
Jørgen Albrechtsen , Sebastian Reinhold Sørensen
1
Geological Survey of Denmark and Greenland, Department of Geochemistry, Denmark,
2
3
Ghent University, Faculty of Bioscience Engineering, Belgium, Helmotz Zentrum Munchen,
4
Institute of Groundwater Ecology, Germany, Technical University of Denmark, Department of
Environmental Engineering, Denmark
240B
Microbial response of dedicated pesticide degraders to low and poorly bio-available
concentrations of pesticides
1
1
1
1
Steffi Herrmann* , Aswini Sekhar , Oanh Thi Phi Nguyen , Benjamin Horemans , Jens
2
1
Aamand , Dirk Springael
1
Division of Soil and Water Management, Department of Earth and Environmental Sciences,
2
KU Leuven, Belgium, Geological Survey of Greenland and Denmark, Denmark
241B
Enrichment and characterization of sulfate reducing bacteria from subseafloor
sediments of the Nankai Trough seismogenic zone
1
2
2
1
Anna Kaksonen* , Stephanie Austin , Timothy McCredden , Christina Morris , Elizabeth
2
3
Watkin , Fumio Inagaki
1
2
CSIRO Land and Water, Australia, School of Biomedical Sciences, Curtin University,
3
Australia, Geomicrobiology Group, Kochi Institute for Core Sample Research, Japan Agency
for Marine-Earth Science and Technology (JAMSTEC), Japan
242B
What controls microbial cell abundance and distribution in deep subseafloor
sediments?
Jens Kallmeyer*
University of Potsdam, Germany
116
PS17 – The Starving Majority
Tuesday 21 August
243B
Vertical profiling of genetic trait in the ocean drilling sediments up to 100 m depth
1
2
1
1
1
Mikihiko Kawai* , Atsushi Toyoda , Yoshihiro Takaki , Shinro Nishi , Wataru Arai , Ikuo
3
4
1
1
1
1
Uchiyama , Takehiko Itoh , Taishi Tsubouchi , Yuki Morono , Kan Aoike , Ken Takai , Asao
2
1
1
Fujiyama , Fumio Inagaki , Hideto Takami
1
2
Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Japan, National
3
Institute of Genetics, Research Organization of Information and Systems, Japan, National
4
Institute of Basic Biology, National Institutes of Natural Sciences, Japan, Tokyo Institute of
Technology, Japan
244B
Estimating bacterial activity and turnover of vegetative cells, bacterial necromass and
TOC in Aarhus Bay sediment
1
1
1
2
2
Alice Langerhuus* , Hans Røy , Mark Lever , Fumio Inagaki , Yuki Morono , Bo B.
1
3
Jørgensen , Bente Aa. Lomstein
1
Center for Geomicrobiology, Department of Bioscience, Aarhus University, Denmark,
2
Geomicrobiology group, Kochi Institute for Core Sample Research, Japan Agency for Marine3
Earth Science and Technology, Japan, Section for Microbiology, Department of Bioscience,
Aarhus University, Denmark
245B
Insights into the physiology of Geobacter metallireducens at low growth rates
1
2
3
4
3
Sviatlana Marozava* , Wilfred Röling , Jana Seifert , Robert Küffner , Martin von Bergen ,
1
Rainer Meckenstock
1
Institute of Groundwater Ecology, Helmholtz Zentrum München GmbH, Germany,
2
Department of Molecular Cell Physiology, Faculty of Earth and Life Sciences, VU University
3
Amsterdam, Netherlands, Department Proteomics, Helmholtz Center for Environmental
4
Research GmbH – UFZ, Germany, Lehr- und Forschungseinheit Bioinformatik, Institut für
Informatik, Ludwig-Maximilians-Universität München, Germany
246B
Active microbial eukaryotes amidst a marine subsurface RNA paleome
1
2
1
William Orsi* , Jennifer Biddle , Virginia Edgcomb
1
2
Woods Hole Oceanographic Institution, USA, University of Delaware, USA
247B
Biofilm formation of the 2, 6-dichlorobenzamide (BAM) degrading Aminobacter sp.
strain MSH1 at macropollutant and micropollutant BAM concentrations
1
1
2
1
Aswini Sekhar* , Benjamin Horemans , Jens Aamand , Dirk Springael
1
2
Katholic University (KU) Leuven, Belgium, GEUS, Denmark
PS18 – The Unknowns: rare ones and unculturables
050B
Entrapment of single cell anaerobic microorganisms in alginate microbeads - towards
cultivation of the "un-culturable"
1
2
1
Rosa Maria Aragão Peralta* , Maria Teresa Alvarez Aliaga , Bo Mattiasson
1
2
Department of Biotechnology, Lund University, Sweden, Instituto de Investigaciones
Fármaco Bioquímicas, Universidad Mayor de San Andrés, Bolivia
051B
Single cell genomics of uncultured oral Chloroflexi, Deltaproteobacteria and
Synergistes
1
1
1
2
2
Alisha Campbell* , James Campbell , Steve Allman , Tanja Woyke , Alexander Sczyrba , Cliff
3
3
3
1
Beall , Ann Griffen , Eugene Leys , Mircea Podar
1
2
University of Tennessee, Oak Ridge National Laboratory, United States, DOE Joint Genome
3
Institute, United States, Ohio State University, United States
117
PS18 – The Unknowns: rare ones and unculturables
Tuesday 21 August
052B
Single-cell genomic characterization of human oral representatives of the uncultured
SR1 and TM7 bacterial phyla
1
1
1
1
2
James Campbell* , Alisha G. Campbell , Steve Allman , James G. Elkins , Tanja Woyke ,
2
2
1
Patrick Schwientek , Alexander Sczyrba , Mircea Podar
1
2
Oak Ridge National Laboratory, USA, DOE Joint Genome Institute, USA
053B
New culturing methods to observe microbial population growth at low concentrations
of environmental pollutants
1
1
2
Kamila Czechowska-Kusio* , Barbara Kazmierczak , Jan van der Meer
1
2
Yale University, USA, Lausanne University, Switzerland
054B
Gammaproteobacterial methanotrophs are rare biosphere members in acidic wetlands
of Northern Russia
Olga Danilova*, Svetlana Dedysh
Winogradsky Institute of Microbiology RAS, Russian Federation
055B
Detection of novel microbes correlated with ammonia concentration in soil
Austin Davis-Richardson*, Kateryna Zhalnina, Eric Triplett
University of Florida, United States
056B
Stories from the rare biosphere: thermophilic endospore-forming bacteria in Aarhus
Bay sediment
1
2
1
1
1
Julia R. de Rezende* , Casey Hubert , Kasper Kjeldsen , Alice Langerhuus , Bente Lomstein ,
1
1
Hans Røy , Bo Barker Jørgensen
1
2
Center for Geomicrobiology, Aarhus University, Denmark, Newcastle University, United
Kingdom
057B
Managing microbial communities for reconstructing complex metagenomes
1
2
3
3
1
Tom Delmont* , Emmanuel Prestat , Eric Pelletier , Denis LePaslier , Pascal Simonet ,
1
Timothy Vogel
1
2
3
Ecole centrale de Lyon, France, LBNL, USA, Genoscope, France
058B
Aggregate scale distribution and cultivation of Gemmatimonadetesfrom agricultural
soil
Mariam Fawaz*, Jennifer DeBruyn, Chelsea DeLay, Sean Schaeffer, Mark Radosevich
University of Tennessee, United States
239B
Isolation of 2-methyl-4-chlorophenoxyacetic acid degrading bacteria from groundwater
sediments using a novel low substrate flux approach
1
2
3
1
Erkin Gozdereliler* , Arnaud Dechesne , Mette Haubjerg Nicolaisen , Rebecca Emilie Sharp ,
1
2
2
1
Jens Aamand , Hans-Jørgen Albrechtsen , Barth Smets , Sebastian Reinhold Sørensen
1
Geological Survey of Denmark and Greenland, Department of Geochemistry, Denmark,
2
Technical University of Denmark, Department of Environmental Engineering, Denmark,
3
University of Copenhagen, Department of Agriculture and Ecology, Denmark
059B
Rarity and diversity of human-associated Archaea revisited - evidence of uncultured
organisms related to Thermoplasmatales in human periodontal biofilms
Hans-Peter Horz*, Ilse Seyfarth, Georg Conrads
RWTH Aachen University; Division of Oral Microbiology and Immunology, Germany
060B
Isolation and characterization of the OCS116 alpha-proteobacterial clade from the Red
Sea
Francy Jimenez*, Ulrich Stingl, David Kamanda Ngugi
King Abdullah University of Science and Technology, Saudi Arabia
118
PS18 – The Unknowns: rare ones and unculturables
Tuesday 21 August
061B
Microbial community structure and ecophysiology of candidate division TM7 in
activated sludge
1
1
1
1
Tomonori Kindaichi* , Shiro Yamaoka , Noriatsu Ozaki , Akiyoshi Ohashi , Jeppe Lund
2
2
Nielsen , Per Halkjær Nielsen
1
2
Hiroshima University, Japan, Aalborg University, Denmark
062B
Enigmatic dendriform planctomycetes from northern wetlands: isolation and
characterization
1
1
2
1
Irina Kulichevskaya* , Yulia Serkebaeva , Werner Liesack , Svetlana Dedysh
1
2
S.N. Winogradsky Institute of Microbiology, Russian Academy of Sciences, Russia, MaxPlanck-Institut für terrestrische Mikrobiologie, Germany
063B
Unculturable state of Ralstonia solanacearum by copper treatment showed distinct
phenotypic changes
Seon-Woo Lee*, Hyun Gi Kong, Hae Young Um, Hyoung Ju Lee, Eunsook Chung, Jai-Heon
Lee
Dong-A University, South Korea
064B
Selective cultivation of nitrifying bacteria present in drinking water treatment plants
1
1
1
2
1
Kengo Momiuchi* , Hirotsugu Fujitani , Norisuke Ushiki , Yoshiteru Aoi , Satoshi Tsuneda
1
2
Waseda University, Japan, Hiroshima University, Japan
065B
Mesotoga lineages: important bacterial constituents of the 'rare biosphere' in polluted
environments
1
1
2
2
1
3
Camilla Nesbo* , Nidal A. Laban , Jane Fowler , Lisa Gieg , Julia Foght , Olga Zhaxybayeva
1
2
3
University of Alberta, Canada, University of Calgary, Canada, West Virginia
University, United States
066B
Functional and structural characteristics of a new esterase isolated from oil diesel
contaminated soil
1
2
1
3
Mariana Pereira* , Thaís Maester , Andrea Fernandes , Eliana Lemos
1
2
3
Brazilian Laboratory of Biosciences LNBio, Brazil, University of Sao Paulo, Brazil, University
of Sao Paulo State, Brazil
067B
Investigating the effect of methane mitigating diets on rumen microbiota using
untargeted massively parallel sequencing
1
2
1
Elizabeth Ross* , Peter Moate , Ben Hayes
1
2
BioSciences Research - Department of Primary Industries, Australia, Department of Primary
Industries, Australia
068B
Development of Diffusion Growth chambers for the isolation of novel spongeassociated bacteria
1
2
3
Peter Schupp* , Susanna Whitfield , Carsten Thoms
1
2
3
University of Oldenburg, Germany, University of Guam Marine Laboratory, Guam, Friedrich
Schiller University Jena, Germany
069B
Inability of even deep genome sequencing to detect a rare variant in a "pure culture"
Pravin Shrestha*, Derek R Lovley
University of Massachusetts, United States
070B
The activated sludge bulking filamentous organism Eikelboom morphotype 0803
embraces two distinct phylotypes within the Chloroflexi
1
2
1
1
Lachlan Speirs* , Tadashi Nittami , Joseph Tucci , Robert Seviour
1
2
Latrobe University, Australia, Yokohama National University, Japan
071B
Screening of verrucomicrobia from soil using metabolic characteristics
Taku Suenaga*, Shigeto Otsuka, Hideomi Itoh, Kazuo Isobe, Keishi Senoo
The University of Tokyo, Japan
119
PS18 – The Unknowns: rare ones and unculturables
Tuesday 21 August
072B
Characteristics of a 4-chlorophenol degrading, sulfate-reducing bacterium isolated
from a river sediment contaminated with chlorinated solvents
1
2
1
3
1
Daisuke Suzuki* , Xinxin Cui , Zhiling Li , Chunfang Zhang , Arata Katayama
1
2
EcoTopia Science Institute, Nagoya University, Japan, Department of Civil Engineering and
3
Architecture, Nagoya University, Japan, Graduate School of Engineering, Nagoya University,
Japan
073B
Comparative physiological analysis of previously uncultured Nitrospira strains isolated
from wastewater treatment plants
1
1
2
1
Norisuke Ushiki* , Hirotsugu Fujitani , Yoshiteru Aoi , Satoshi Tsuneda
1
2
Waseda university, Japan, Hiroshima university, Japan
074B
Abundance and novel lineages of Thraustochytrids in Hawaiian waters
1
2
3
2
David Wang* , Qian Li , Xin Wang , Nianzhi Jiao
1
2
3
Peking University, China, Xiamen University, China, University of Hawaii, USA
075B
Genome comparision between culturable and nonculturable Methanococcus
maripaludis strains
1
2
3
4
4
5
Xiaoyi Wang* , Paul Greenfield , Paul Monis , Dongmei Li , Phil Hendry , Tara Sutherland
1
2
CSIRO Land and Water, Australia, CSIRO Mathematics Informatics and Statistics, Australia,
3
4
Australian Water Quality Centre, SA Water, Australia, CSIRO Food and Nutritional Sciences,
5
Australia, CSIRO Ecosystem Sciences, Australia
PS19 – Virus-Bacteria Interactions
351B
Single cell perspective of phage infection of marine Pseudoalteromonas using
phageFISH - a novel method for gene specific detection of both intracellular and free
viruses
1
2
1
1
1
Elke Allers , Cristina Moraru* , Melissa Duhaime , Erica Beneze , Natalie Solonenko , Jimena
2
2
1
Barrero Canosa , Rudolf Amann , Matthew B. Sullivan
1
2
University of Arizona, USA, Max Planck Institute for Marine Microbiology, Germany
352B
Viral manipulation of the genetic landscape of hydrothermal vent microbial
communities
1
2
1
Rika Anderson* , William Brazelton , John Baross
1
2
University of Washington, United States, East Carolina University, United States
353B
Prochlorococcus strains resistant to phage continue evolving toward an improved
growth rate and reduced resistance range
Sarit Avrani*, Daniel A Schwartz, Debbie Lindell
Technion - Israel Institute of Technology, Israel
354B
Employing UV and filtration systems in the treatment and removal of the pathogenic
noroviruses from sewage waste
1
2
3
4
2
5
6
Maria Barrett , K. Fitzhenry , V. O'Flaherty , W. Dore , M. Cormican , G. Collins* , E. Clifford
1
Microbial Ecology Laboratory, Department of Microbiology, School of Natural Science,
2
3
National University of Ireland, Ireland, Medical Microbiology, UHG, Ireland, College of
4
5
Engineering and Informatics, Ireland, Marine Institute, Ireland, Microbial Ecophysiology
6
Laboratory, School of Natural Sciences, Ireland, Ryan Institute for Environment, Marine and
Energy, Ireland
120
PS19 – Virus-Bacteria Interactions
Tuesday 21 August
355B
Interaction between viruses and prokaryotes throughout the water column in the
Atlantic Ocean
1
1
2
1
1
Daniele De Corte* , Eva Sintes , Taichi Yokokawa , Thomas Reinthaler , Gerhard J Herndl
1
2
University of Vienna, Austria, Royal Netherlands Institute for Sea Research, Netherlands
356B
Control of the biofilm-forming bacteria by phages isolates of activated sludge from
refinery wastewater treatment systems
1
1
1
1
2
Sergio De Paula* , Roberto D Sousa , Vinicius D Silva , Livia C Fidelis , Cynthia C Silva ,
3
3
3
2
Maira O Sousa , Rodrigo S Sousa , Ana Paula Torres , Valeria M Oliveira
1
2
Federal University of Viçosa, Brazil, Campinas University 3
UNICAMP, Brazil, Petrobras, Brazil
357B
Quantification of temperate Rhizobiophages and associated host populations in
subsurface sediments of ODP Leg 201
Tim Engelhardt*, Heribert Cypionka, Bert Engelen
Carl-von-Ossietzky University Oldenburg, Institut für Chemie und Biologie des
Meeres, Germany
358B
Abundance and morphology of thermophilic phages in Obsidian Pool, Yellowstone
National Park
1
1
2
Hallgerd Eydal* , John R Spear , Lise Øvreås
1
2
Colorado School of Mines, United States, University of Bergen, Norway
359B
A metagenomic survey of viral communities in four perennial ponds of the Mauritanian
Sahara
Laura Fancello*
Université d'Aix-Marseille, France
360B
Metagenomic comparison of the viral communities in the deep Atlantic and
Mediterranean waters
Juan Antonio Garcia*, Gerhard J. Herndl, Christian Winter
University of Vienna, Austria
361B
Tectivirus preying on the Bacillus cereus group: prevalence, phage-host interactions
and host life-traits changes
Annika Gillis*, Jacques Mahillon
Universite catholique de Louvain-ELIM, Belgium
362B
Mutations in porin-like genes in the marine cyanobacterium Synechococcus sp.
WH8109 confer resistance to T7-like podoviruses
Eyal Greengrass*, Debbie Lindell
Technion, Israel
363B
Sequential and simultaneous application of bacteriophages against Pseudomonas
aeruginosa in vitro and in waxmoth larvae
1
2
3
2
4
Alex Hall* , Daniel De Vos , Ville-Petri Friman , Jean-Paul Pirnay , Angus Buckling
1
2
ETH Zürich, Switzerland, Laboratory for Molecular and Cellular Technology, Brussels,
3
4
Belgium, University of Oxford, United Kingdom, University of Exeter, United Kingdom
364B
Dynamics of bacteriophages in supernatant of wastewater treatment processes
Yang He*, Satoh Hiroyasu, Mino Takashi
The University of Tokyo, Japan
365B
Viral impacts on bacterioplankton community gene transcription in the central Gulf of
Maine
Ian Hewson*, Erin Eggleston
Cornell University, United States
121
PS19 – Virus-Bacteria Interactions
Tuesday 21 August
366B
Bacteroidetes phage genomes suggest that multiple novel phage types are widespread
in the global oceans
1
1
2
3
Karin Holmfeldt* , Natalie Solonenko , Nathan Verberkmoes , Lasse Riemann , Matthew
1
Sullivan
1
2
3
University of Arizona, USA, Oak Ridge National Lab, USA, University of Copenhagen,
Denmark
367B
Ecogenomics of marine picocyanobacterial podoviruses
1
2
1
Sijun Huang* , Nianzhi Jiao , Feng Chen
1
2
University of Maryland Center for Environmental Science, United States, Xiamen
University, China
368B
Mechanisms leading to establishment of superinfective Pf4 phage in Pseudomonas
aeruginosa PAO1 biofilms
1
1
2
1
Janice Gee Kay Hui* , Anne Mai-Prochnow , Janosch Klebensberger , Diane McDougald ,
1
1
1
1
Kerensa McElroy , Torsten Thomas , Staffan Kjelleberg , Scott Rice
1
2
Centre for Marine Bio-Innovation, University of New South Wales, Australia, Institute of
Technical Biochemistry, University of Stuttgart, Germany
369B
Understanding the interaction between a deep-sea filamentous phage SW1 with its host
Shewanella piezotolerans WP3
1
2
2
Huahua Jian* , Xiang Xiao , Fengping Wang
1
2
Shanghai Jiao Tong University, China, State Key Laboratory of Microbial Metabolism and
School of Life Science & Biotechnology, State Key Laboratory of Ocean Engineering,
Shanghai Jiao Tong University, China
370B
Isolation and genomic characterization of four bacteriophages infecting marine bacteria
belonging to the Proteobacteria and Bacteroidetes
Ilnam Kang*, Hani Jang, Hyun-Myung Oh, Jang-Cheon Cho
Inha University, South Korea
371B
Metagenomic study of uncultured viruses in sea cucumbers and shrimps
Kyoung-Ho Kim*, Eun Soo Noh
Pukyong National University, South Korea
372B
Infection pattern of Microcystis cyanophage in a eutrophic pond
Shigeko Kimura*, Takashi Yoshida, Naohiko Hosoda, Takashi Honda, Sotaro Kuno, Rikae
Kamiji, Ryoya Hashimoto, Yoshihiko Sako
Kyoto University, Japan
373B
A comparative analysis of multiple roseophage infecting a single host from a genomics
perspective
1
2
1
Thomas Lane* , Charles Budinoff , Alison Buchan
1
2
University of Tennessee, Genome Sciences and Technology, United States, University of
Tennessee, Microbiology Department, United States
374B
Role of oxidative stress on the conversion of the filamentous bacteriophage Pf4 of
Pseudomonas aeruginosato a lytic form during biofilm development
1
1
2
3
2
Anne Mai-Prochnow* , Janice Hui , Staffan Kjelleberg , Diane McDougald , Scott Rice
1
2
University of New South Wales / Centre for Marine Bio-Innovation, Australia, University of
New South Wales / Centre for Marine Bio-Innovation and Nanyang Technological University /
3
The Singapore Centre on Environmental Life Sciences Engineering, Australia, University of
New South Wales / Centre for Marine Bio-Innovation and Nanyang Technological University /
The Advanced Environmental Biotechnology Centre, Australia
122
PS19 – Virus-Bacteria Interactions
Tuesday 21 August
375B
Proteomic analysis of interactions between filamentous Pf4 phage with its P.
aeruginosa PAO1 host
1
2
1
1
Manisha Mukherjee* , Ling Zhong , Staffan Kjelleberg , Scott A. Rice
1
2
Singapore Centre on Environmental Life Sciences Engineering, Singapore, University of
New South Wales, Australia
376B
Are certain viral genes more likely to become CRISPR spacers?
Daniel Nasko*, Shawn Polson, Jaysheel Bhavsar, Eric Wommack
University of Delaware, United States
377B
Induction of a viral community infecting nitrate reducing bacteria within a nitrate and
uranium contaminated aquifer
Donald Pan*, Rachel Watson, Zheng Huan Tan, Daniel Snow, Karrie Weber
University of Nebraska Lincoln, USA
378B
Metagenomics of Phage-Harbored Metabolic Genes in the Red-Sea
Alon Philosof*, Oded Beja
Technion- Israel Institute of Technology, Israel
379B
Heat output from marine microbial communities
Peter Salamon*, Essmaiil Djamali, James Nulton, Peter Turner, Forest Rohwer
San Diego State University, United States
380B
Effect of viruses on bacterial community structure and single-cell carbon and nitrogen
assimilation
1
1
1
2
Abdul Rahiman Sheik* , Gaute Lavik , Phyllis Lam , Corina P.D. Brussaard , Marcel M.M.
1
Kuypers
1
2
Max Planck Institute for Marine Microbiology, Germany, Royal Netherlands Institute for Sea
Research, Netherlands
381B
Dynamics and diversity of marine viruses and prokaryotes along a depth gradient in
Sognefjorden, Norway
Julia Endresen Storesund*, Ruth-Anne Sandaa, Svein Rune Erga, Siv Prestegard, Frede
Thingstad
University of Bergen, Norway
382B
Habitat dependent virus–bacteria interactions
1
1
2
2
Sigitas Sulcius* , Ricardas Paskauskas , Jamileh Javidpour , Ulrich Sommer
1
2
Klaipeda University, Lithuania, Helmholtz Centre for Ocean Research, Germany
383B
Characterisation and diversity of freshwater cyanophages in water bodies that support
harmful cyanobacterial blooms
Siobhan Watkins*, Joy Watts, Paul Hayes
University of Portsmouth, United Kingdom
384B
Selective parasites improve host evolvability
Hywel Williams*
University of Exeter, United Kingdom
385B
Virioplankton diversity and genomic repertoire across the Baltic Sea salinity gradient
1
1
1
1
Lisa Zeigler Allen* , Christopher Dupont , Andrey Tovchigrechko , Mathangi Thiagarajan ,
1
1
2
2
2
Johannes Goll , Jeff Hoffman , John Larsson , Mark Eriksson , Karolina Ininbergs , Birgitta
2
1
1
Bergman , Shibu Yooseph , Craig Venter
1
2
J. Craig Venter Institute, United States, Stockholm University, Sweden
123
PS19 – Virus-Bacteria Interactions
Thursday 23 August
PS20 – Bioinformatics in Microbial Ecology
001A
Grinder: a versatile amplicon and shotgun sequence simulator
1
1
2
1
1
Florent Angly* , Dana Willner , Forest Rohwer , Philip Hugenholtz , Gene Tyson
1
2
Australian Centre for Ecogenomics, Australia, San Diego State University, USA
002A
Comprehensive Analysis of Antibiotic Resistance Genes in River Sediment, Well Water
and Soil Microbial Communities Using Metagenomic DNA Sequencing
1
2
2
1
Johan Bengtsson* , Fredrik Boulund , Erik Kristiansson , DG Joakim Larsson
1
2
University of Gothenburg, Sweden, Chalmers University of Technology, Sweden
003A
Semantic tools for the management of phototrophic biofilm data
Andreas Bohn*
Univ Nova Lisboa / Inst Tecnologia Quimica Biologica, Portugal
004A
DOE Systems Biology Knowledgebase: capturing the functional complement of
individual members of microbial communities using reference genomes
1
2
1
1
1
Dylan Chivian* , Folker Meyer , Michael Sneddon , Keith Keller , Paramvir Dehal , Andreas
2
2
2
2
2
Wilke , Narayan Desai , Jared Wilkening , Kevin Keegan , William Trimble , Robert
3
2
1
Cottingham , Rick Stevens , Adam Arkin
1
2
3
Lawrence Berkeley National Lab, United States, Argonne National Lab, United States, Oak
Ridge National Lab, United States
005A
Effect of denoising in biological conclusions of amplicon-based microbial community
studies
1
2
3
4
Jose C. Clemente Litran* , Daniel McDonald , J. Gregory Caporaso , Rob Knight
1
2
Department of Chemistry and Biochemistry, University of Colorado, USA, Biofrontiers
3
Institute, University of Colorado, USA, Department of Computer Science, Northern Arizona
4
University, USA, Howard Hughes Medical Insitute, USA
006A
RDP tools for gene-targeted analysis
James Cole*, Benli Chai, Jordan Fish, Qiong Wang, Donna McGarrell, C. Titus Brown, Yanni
Sun, James Tiedje
Michigan State University, United States
007A
Maudules: a new soil oriented Hidden Markov Model database dedicated to functionally
bin soil nucleic acids and proteins sequences
1
2
1
3
Maude M. David , Emmanuel Prestat* , Richard S. Canon , Konstantinos Mavromatis , Janet
1
K. Jansson
1
2
3
Lawrence Berkeley National Laboratory, USA, Kansas State University, USA, Joint Genome
Institute, USA
008A
Extracellular hydrolases and molecular ecology of Aspergillus species
Domenico Davolos*, Biancamaria Pietrangeli
INAIL, Department of Productive Plants and Interaction with the Environment (DIPIA), Italy
010A
DOE Systems Biology Knowledgebase: From genome sequence to evidence-based
metabolic models
1
2
2
1
1
Paramvir Dehal* , Chris Henry , Ross Overbeek , Ben Bowen , John-Marc Chandonia , Pavel
1
1
2
1
1
Novichkov , William Riehl , Scott Devoid , Michael Sneddon , Keith Keller , Robert
3
4
2
1
Cottingham , Sergei Maslov , Rick Stevens , Adam Arkin
1
2
3
Lawrence Berkeley National Lab, United States, Argonne National Lab, United States, Oak
4
Ridge National Laboratory, United States, Brookhaven National Lab, United States
011A
Molecular ecological network analyses
1
1
2
1
3
1
Ye Deng* , Yihuei Jiang , Yunfeng Yang , Zhili He , Feng Luo , Jizhong Zhou
1
2
3
University of Oklahoma, USA, Tsinghua University, China, Clemson University, USA
124
PS20 – Bioinformatics in Microbial Ecology
Thursday 23 August
012A
CoNet - a co-occurrence network inference tool
Karoline Faust*, Jeroen Raes
VIB-VUB, Belgium
013A
Scaling microbial ecology software from desktop to cloud computing systems provides
new insight into a range of microbial systems
1
1
1
1
Antonio Gonzalez* , Meg Pirrung , Will Van Treuren , Jesse Stombaugh , J. Gregory
2
1
Caporaso , Rob Knight
1
2
University of Colorado at Boulder, United States, Northern Arizona University, USA
014A
A Bayesian approximation to the neutral model
Keith Harris*, Christopher Quince
University of Glasgow, United Kingdom
015A
The Diversity of Fungi and Bacteria in Bioaerosols Emitted during Composting of
Municipal Solid Waste
1
2
2
2
2
Pin-Jing He , Na Yang* , Fan Lu , Wei Zheng , Li-Ming Shao
1
2
Tongji University, China, Institute of Waste Treatment and Reclamation, Tongji
University, China
016A
EMSL: A national user facility for cutting-edge environmental and molecular research open to scientists from around the world
Matthias Hess*, Donald R. Baer, Nancy J. Hess, Scott E. Baker
Washington State University, Environmental Molecular Sciences Laboratory, Pacific Northwest
National Laboratory, USA
017A
PyroTRF-ID: A novel bioinformatics approach for the indentification of terminalrestriction fragments using microbiome pyrosequencing data
1
1
1
2
2
Christof Holliger* , David Weissbrodt , Noam Shani , Lucas Sinclair , Grégory Lefevbre ,
2
3
1
Jacques Rougemont , Pierre Rossi , Julien Maillard
1
2
3
EPFL ENAC IIE LBE, Switzerland, EPFL SV PTECH PTBB, Switzerland, EPFL ENAC IIE
GR-CEL, Switzerland
018A
Evolution and distribution of key enzymes from the benzoate degradation pathway in
metagenomic datasets
Valerie Hubalek*
Uppsala University, Sweden
019A
Crass: identification and assembly of CRISPR loci using unassembled metagenomic
sequencing reads
Michael Imelfort, Connor Skennerton*, Gene Tyson
University of Queensland, Australia
461B
FRAGALIGN: Alignment of DNA length polymorphisms by dynamic programming within
the R environment.
Christopher Jones*
Swedish University of Agricultural Sciences, Sweden
188B
Clustom: a novel method for clustering metagenome sequences by minimizing
overlaps
1
1
2
3
Kyung Mo Kim* , Tae-Kyung Kim , Jeongsu Oh , Soon Gyu Hong
1
2
Korea Research Institute of Bioscience and Biotechnology, South Korea, Chungbuk National
3
University, South Korea, Korea Polar Research Institute, South Korea
020A
Beta diversity measurements, sequencing error, and complexity in microbial gene
surveys
Justin Kuczynski*
University of Colorado, United States
125
PS20 – Bioinformatics in Microbial Ecology
Thursday 23 August
021A
MeTaxa: an ultra-fast and accurate taxonomic classifier for metagenomic sequences
Chengwei Luo*, Luis Rodriguez-R, Konstantinos Konstantinidis
Georgia Institute of Technology, USA
022A
Mobile gene pool in long-term copper polluted soil
Wenting Luo*, Michael Roggenbuck, Lars H. Hansen, Søren J. Sørensen, Leise Riber
University of Copenhagen, Denmark
023A
AXIOME and SSUnique: new computational tools for automated exploration of
microbial diversity and taxonomic novelty
Michael Lynch*, Andre Masella, Michael Hall, Andrea Bartram, Josh Neufeld
University of Waterloo, Canada
024A
Characterization and molecular modeling of a lipolytic enzyme from metagenomic
library of soil contaminated with of petroleum hydrocarbons
1
2
3
Thaís Maester* , Mariana Pereira , Eliana Lemos
1
2
3
Universidade de São Paulo, Brazil, Universidade de São Paulo/ LNBio, Brazil, UNESP/Dpto
de Tecnologia, Brazil
025A
High resolution shotgun metagenomic analysis of diel virioplankton dynamics
1
1
2
1
1
Rachel Marine* , Daniel Nasko , Shannon Williamson , Shawn Polson , Eric Wommack
1
2
University of Delaware, United States, Lake Pend Oreille Waterkeeper, United States
026A
Refactoring Greengenes
1
2
3
4
Daniel McDonald* , Rob Knight , Todd DeSantis , Phil Hugenholtz
1
Department of Computer Science and Biofrontiers Institute, University of Colorado, USA,
2
3
Howard Hughes Medical Institute, Boulder, USA Department of Bioinformatics, Second
4
Genome Inc., San Bruno, USA Australian Centre for Ecogenomics, School of Chemistry and
Molecular Biosciences and Institute for Molecular Bioscience, Australia
027A
Metagenomics and microbial proteases
Laura Morris*
Cardiff University, United Kingdom
028A
Characterization of the diversity and prevalence of antibiotic resistance gene
determinants in the environment using a metagenomic approach
Joseph Nesme*, Sébastien Cécillon, Tom O. Delmont, Pascal Simonet, Jean-Michel Monier
Ecole Centrale de Lyon, France
029A
Pyrotrimmer: a user-friendly software for pre-processing multiplex pyrosequencing
data
1
2
3
Jeongsu Oh* , Soon Gyu Hong , Kyung Mo Kim
1
2
Chungbuk National University, South Korea, Korea Polar Research Institute, South
3
Korea, Korea Research Institute of Bioscience and Biotechnology, South Korea
030A
Reconstruction of metagenomes from 16S rRNA gene sequence in biofilm formation
process
1
1
1
2
1
Shujiro Okuda* , Yuki Tsuchiya , Chiho Kiriyama , Masumi Itoh , Hisao Morisaki
1
2
Ritsumeikan University, Japan, Hokkaido University, Japan
031A
The gut microbiota of lean cloned and non-cloned pigs during diet-induced obesity
1
1
2
1
Rebecca Pedersen* , Anders Andersen , Jan Stagsted , Mette Boye
1
2
DTU-Veterinary Institute, Denmark, University of Aarhus-Department of Food
Science, Denmark
126
PS20 – Bioinformatics in Microbial Ecology
Thursday 23 August
032A
The abundance and expression of secondary metabolism genes in marine plankton
reveals new phylogenetic diversity of micro-eukaryote ketosynthase domains
1
2
2
1
1
Kevin Penn* , Lisa Allen , Andrew Allen , Nadine Ziemert , Paul Jensen
1
2
Scripps Institution of Oceanography, University of California, San Diego, USA, The J. Craig
Venter Institute, USA
033A
Megx.net: Marine ecological genomics in the light of Micro B3
1
1
1
1
1
Julia Schnetzer* , Renzo Kottmann , Sebastian Groß , Michael Schneider , Pelin Yilmaz , Pier
1
2
1
Luigi Buttigieg , Aleksandar Pop Ristov , Frank Oliver Glöckner
1
2
Max Planck Institute for marine microbiology, Germany, InterWorks, Macedonia
211B
Metaproteome analysis of rat microbiota reveals gut section resolved species
distribution and enzymatic functionalities
1
2
2
3
2
4
Jana Seifert* , S.b. Haange , N. Schlichting , H. Till , A. Oberbach , M. von Bergen
1
2
UFZ-Helmholtz Center for Environmental Research GmbH, Germany, Leipzig University
Medical Centre, Integrated Research and Treatment Center (IFB) Adiposity Diseases,
3
4
Germany, University Hospital of Leipzig, Department of Pediatric Surgery, Germany, UFZHelmholtz Centre for Environmental Research, Department of Proteomics, Germany
034A
MetaDBScreen: tools to create metagenomic databases on demand
Léa Siegwald, Frédéric Texier, Christine Hubans-Pierlot*
Genoscreen, France
035A
Exploring microbial controls on methane cycling using MLTreeMap
Young Chang Song*, Antoine Page, Steven Hallam
University of British Columbia, Canada
036A
CAMERA: The resources of data, bioinformatics tools, and computations for microbial
ecology
Shulei Sun*, Jing Chen, Weizhong Li, Abel Lin, Ilkay Altintas, Eric Allen, Mark Ellisman,
Jeffrey Grethe
University of California, San Diego, United States
037A
Exploiting the antimicrobial potential of soil metagenomic libraries from the Iberian
Peninsula with high-throughput micro-fermentation and screening systems
Marina Sánchez-Hidalgo*, Gerald F. Bills, Olga Genilloud
Fundación MEDINA, Centro de Excelencia en Investigación de Medicamentos Innovadores en
Andalucía, Spain
038A
ePANAM: a web server dedicated to the analysis of next generation amplicons
1
1
1
2
Najwa Taib* , Gisèle Bronner , Jean-Christophe Charvy , Engelbert Mephu Nguifo , Vincent
3
1
Breton , Didier Debroas
1
2
Université Blaise Pascal / LMGE - UMR CNRS 6023, France, Université Blaise Pascal /
3
LIMOS - UMR CNRS 6158, France, Université Blaise Pascal/LPC-UMR CNRS 6533, France
039A
Evaluation method for potential functionome harbored in the genome and metagenome
1
2
3
4
3
Hideto Takami* , Takeaki Taniguchi , Yuki Moriya , Tomomi Kuwahara , Mamoru Kanehisa ,
3
Susumu Goto
1
2
Japan Agency for Marine-Earth Science & Technology, Japan, Mitsubishi Research Institute,
3
4
Japan, Kyoto University/Chemical Research Institute, Japan, Kagawa University, Japan
040A
Archetypal analysis of gene expression data is an alternative tool in transcriptome data
processing
Juliane Thoegersen*, Lars Jelsbak, Soeren Molin
Technical University of Denmark, Denmark
127
PS20 – Bioinformatics in Microbial Ecology
Thursday 23 August
042A
Biodiversity of nitrogen fixation microorganisms from nodule bacteria
Bakhtiyor Umarov*
Institute of Microbiology, Uzbekistan
043A
'OPM' – an R package for analysing OmniLog Phenotype Microarray data
Lea Vaas, Johannes Sikorski*, Nora Buddruhs, Anne Fiebig, Hans-Peter Klenk, Markus Göker
Leibniz Institute-DSMZ German Collection of Microorganisms and Cell Cultures, Germany
044A
Can we identify the native function of beta-lactamases bioinformatically and are we able
to identify those that provide antibiotic resistance?
Gisle Alberg Vestergaard*, Søren J. Sørensen, Lars H. Hansen
Molecular Microbial Ecology Group, University of Copenhagen, Denmark
045A
SILVA: comprehensive databases for quality checked and aligned ribosomal RNA
sequence data compatible with ARB
1
1
1
2
1
Pelin Yilmaz* , Elmar Pruesse , Christian Quast , Wolfgang Ludwig , Joerg Peplies , Frank
1
Oliver Gloeckner
1
2
Max Planck Institute for Marine Microbiology, Germany, Technical University of
Munich, Germany
046A
Metagenomics community traits workflow by the Biodiversity Virtual e-Laboratory
(BioVeL) project
1
1
2
1
Pelin Yilmaz* , Renzo Kottmann , Antonio Fernàndez Guerra , Frank Oliver Gloeckner ,
3
Matthias Obst
1
2
Max Planck Institute for Marine Microbiology, Germany, Center for Advanced Studies of
3
Blanes, CEAB–CSIC, Blanes, Spain, Spain, University of Göteborg, Sweden
PS21 – Microbial Community Diversity: 16S and beyond - Main Authors N-Z
214A
Describing the cuturable and unculturable bacterial communities from guarana leaves,
a native Amazon crop, and its applicability to pathogen control of Colletotrichum spp.
1
1
1
1
Maria Letícia Bonatelli* , Sarina Tsui , Bruna Durante Batista , Maria Carolina Quecine ,
1
2
1
1
Joelma Marcon , Paulo Teixeira Lacava , Aline Pizzirani-Kleiner , Elliot Kitajima , João Lúcio
1
de Azevedo
1
2
ESALQ/USP, Brazil, UNIFAL, Brazil
215A
High-throughput sequencing of fungal communities in disease suppressive soils
1
2
2
3
Vadakattu Gupta* , Christopher Penton , James Tideje , Kathy Ophel-Keller , Stephen
4
5
1
6
Neate , Michael Gillings , Paul Harvey , David Roget
1
2
3
CSIRO Ecosystem Sciences, Australia, CME, Michigan State University, USA, SARDI,
4
5
6
Australia, DEEDI, Australia, Macquaire University, Australia, CSIRO (retired), Australia
216A
Identification of acetate utilizers in marine sediment using DNA-Stable Isotope Probing
Hyunsoo Na*, Kasper Kjeldsen, Mark Lever, Bo Barker Jørgensen
Aarhus University, Denmark
217A
Characterization of nitrifying and total bacterial community structure in five different
small drinking water networks
Zsuzsanna Nagymáté*, Károly Márialigeti
Eötvös Loránd University; Department of Microbiology, Hungary
128
PS21 – Microbial Community Diversity
Thursday 23 August
218A
The microbial footprint of a city: Views from Lake Michigan
1
2
1
Ryan Newton* , Mitchell Sogin , Sandra McLellan
1
2
University of Wisconsin-Milwaukee, Great Lakes WATER Institute, United States, Josephine
Bay Paul Center, Marine Biological Laboratory, United States
219A
An assessment of seasonal shifts in bacterial community composition in a Singaporean
reservoir system using 16S rRNA pyrosequencing
1
1
2
3
4
Charmaine Ng* , Damien Raingeard , Peter Steinberg , Ole Larsen , Diane McDougald
1
Advanced Environmental Biotechnology Centre, Nanyang Environment and Research Water
2
Institute, Nanyang Technological University, Singapore, Sydney Institute of Marine Science,
3
Chowder Bay, NSW, Australia, DHI-NTU Water & Environment Research Centre and
4
Education Hub, Nanyang Technological University, Singapore, Centre for Marine Biofouling
and Bio-Innovation, School of Biological, Earth and Environmental Sciences, University of
New South Wales, Sydney, Australia
220A
Niche partitioning of ammonia-oxidizing archaea in the water column and brineseawater interface of the Red Sea
David Kamanda Ngugi*, Ulrich Stingl
King Abdullah University of Science and Technology (KAUST), Saudi Arabia
221A
A novel polyphosphate-accumulating organism in full-scale enhanced biological
phosphorus removal plants: 'Candidatus Halomonas phosphatis'
Hien Nguyen*, Jeppe Nielsen, Per Nielsen
Aalborg University, Denmark
222A
Spatial variation of archaeal community structure in Barents Sea sediment
Tan Thi Nguyen*, Bjarne Landfald
University of Tromsø, Norway
223A
Reasons for overestimating relative abundances of Eikelboom filamentous morphotype
Type 0041 in activated sludge, using existing FISH probes designed to target it
1
2
2
1
2
Tadashi Nittami* , Lachlan Speirs , Joseph Tucci , Masatoshi Watanabe , Robert Seviour
1
2
Yokohama National University, Japan, La Trobe University, Australia
224A
Evaluation of external 16S rRNA genes for quality control of massive parallel 16S rRNA
gene sequencing
Nahiro Noda, Akiko Ohashi, Yuji Sekiguchi*
National Institute of Advanced Industrial Science and Technology (AIST), Japan
225A
Diversity and biogeographic variation in microbial mat archaeal and bacterial
populations within three natural Bahamian hypersaline lagoons
Sean Norman*, Erin Fichot, Benjamin Bey
University of South Carolina, USA
226A
Genetic characterization of industrial isolates of Acidithiobacillus caldus by Multi
Locus Sequence Typing analysis
1
2
3
2
2
Harold Nuñez , Juan Pablo Cárdenas , Amir Shmaryahu , Paulo Covarrubias , Lillian Acuña ,
2
Raquel Quatrini*
1
2
Fundación Ciencia & Vida, Fundación Ciencia & Vida; Facultad de Ciencias Biologicas,
3
Universidad Andrés Bello, Chile, Fundación Ciencia & Vida, Chile
227A
New insights into microbial communities in intensive care units
1
1
2
3
Lisa Oberauner* , Christin Zachow , Stefan Lackner , Stefan Liebminger , Christoph
4
4
1
Högenauer , Karl-Heinz Smolle , Gabriele Berg
1
Graz University of Technology/Institute for Environmental Biotechnology, Austrian Centre of
2
Industrial Biotechnology, Austria, Medical University of Graz/Center for Medical Research,
3
4
Austria, Research Center Pharmaceutical Engineering, Austria, Medical University of
Graz/Department of Internal Medicine, Austria
129
PS21 – Microbial Community Diversity
Thursday 23 August
228A
Culture-dependent and -independent community analysis of endophytic bacteria in
arabidopsis thaliana
Shigenori Odashima*, Shigeto Otsuka, Kazuo Isobe, Keishi Senoo
The University of Tokyo, Japan
229A
Molecular characterization of bacterial phylogenetic and functional groups at
Terrebonne Bay along the coastline of the Gulf of Mexico
Ola Olapade*
Albion College, USA
230A
Diversity of bacterial community in the acid mine drainage by using pyrosequencing
Seong Chan Park*, Yeoung Min Hwang, Keun Sik Baik, Han Na Choe, Sonny Ramos, CheonYoung Park, Chi Nam Seong
Sunchon National University, South Korea
231A
Microorganism and macroorganism communities: random co-occurrence or correlated
patterns?
1
2
2
3
Christina Pavloudi* , Aikaterini Vasileiadou , Elena Sarropoulou , Ioanna Kalantzi , Nafsika
2
3
2
2
Papageorgiou , Irini Tsikopoulou , Panagiotis Kasapidis , Jacques Lagnel , Georgios
2
3
2
Kotoulas , Ioannis Karakassis , Christos Arvanitidis
1
Institute of Marine Biology and Genetics, Hellenic Centre for Marine Research and
2
Department of Biology, University of Crete, Greece, Institute of Marine Biology and Genetics,
Hellenic Centre for Marine Research and Department of Biology, University of Patras, Greece,
3
Department of Biology, University of Crete, Greece
232A
Analysis of diversity and abundance of taxonomic and functionally important bacterial
populations in mangroves from Brazil
1
2
3
4
5
Vivian Pellizari* , Rubens Duarte , Fernando Andreote , Timothy Johnson , Benli Chai ,
6
2
2
4
Itamar Melo , Felipe Freitas , Márcia Bícego , James Tiedje ,
1
2
Universidade de São Paulo, Brazil, Universidade de São Paulo/ Instituto Oceanográfico,
3
4
Brazil, Universidade de São Paulo - ESALQ, Brazil, Michigan State University/ Center for
5
Microbial Ecology, USA, Michigan State University / Center for Microbial Ecology, USA,
6
Empresa Brasileira de Pesquisa Agropecuária / EMBRAPA Meio Ambiente, Brazil
233A
Microbial communities of methane cycle in boreal peatlands under a warming climate
1
2
1
1
3
Krista Peltoniemi* , Heli Juottonen , Päivi Mäkiranta , Timo Penttilä , Henri Siljanen , Tero
1
1
Tuomivirta , Hannu Fritze
1
2
3
Finnish Forest Research Institute (Metla), Finland, University of Helsinki, Finland, University
of Eastern Finland
234A
Changes in eco-functional gene community composition as a response to artificial
warming in permafrost and grassland soils
1
2
3
3
1
C. Ryan Penton* , Edward A.G. Schuur , Liyou Wu , Jizhong Zhou , Jim Cole , Amanda
1
1
1
Pham , Derek St. Louis , James M. Tiedje
1
2
Michigan State University, Center for Microbial Ecology, USA, University of Florida,
3
Department of Biology, USA, University of Oklahoma, Dept. Botany and Microbiology, USA
235A
Seasonal changes in abundance and diversity of N-cycling microorganisms across
agricultural soils
1
2
3
2
Michele C Pereira e Silva* , Franck Poly , Brigitte Hai , Nadine Guillaumaud , Michael
3
1
1
Schloter , Jan Dirk van Elsas , Joana F Salles
1
2
3
University of Groningen, Netherlands, CNRS-Université Lyon 1, France, Department for
Terrestrial Ecogenetics, Helmholtz Zentrum München, Germany,
236A
Microbial diversity and community composition in humic lakes
1*
2
2
1
1
Sari Peura , Alexander Eiler , Stefan Bertilsson , Hannu Nykänen , Marja Tiirola , Roger
1
Jones
1
2
University of Jyväskylä, Finland, Uppsala University, Sweden
130
PS21 – Microbial Community Diversity
Thursday 23 August
237A
Improved group-specific primers for T-RFLP and Q-PCR analysis of complex soil and
rhizosphere microbial communities
Stefan Pfeiffer, Birgit Mitter*, Milica Pastar, Branislav Nikolic, Angela Sessitsch
1
A.I.T. Austrian Institute of Technology, Austria
238A
Gut microbial community composition and metabolic profiles in C57BL/6J and
C57BL/6N mice
1
1
1
2
1
Barbara Pfitzner* , Melanie Kahle , Alesia Walker , Jan Rozman , Martin Klingenspor , Valerie
1
1
1
1
Gailus-Durner , Helmut Fuchs , Philippe Schmitt-Kopplin , Michael Schmid , Susanne
1
1
1
Neschen , Martin Hrabé de Angelis , Anton Hartmann
1
2
Helmholtz Zentrum München, Germany, Technical University Munich, Germany
239A
Microbial community structure differences associated with elevated hydrocarbon
concentrations in sediment near and far from the Deepwater Horizon MC-252 wellhead
1
1
1
1
2
Yvette Piceno* , Lauren Tom , Francine Reid , Sharon Borglin , Julian Fortney , Dominique
2
1
2
3
3
Joyner , Angelica Pettenato , Terry Hazen , Chelsea Spier , William Stringfellow , Jakk
1
1
Wong , Gary Andersen
1
2
3
Lawrence Berkeley National Lab, USA, University of Tennessee, USA, University of the
Pacific, USA
240A
Testing the limits of 454 pyrotag sequencing: reproducibility, quantitative assessment
and comparison to T-RFLP fingerprinting of aquifer microbes
Giovanni Pilloni*, Michael S. Granitsiotis, Marion Engel, Tillmann Lueders
Helmholtz Zentrum Munich, Germany
241A
Microbial biodiversity on sulfide chimneys from active and inactive vent sites of
hydrothermal fields in the Manus Basin, Papua New Guinea
1
2
2
3
1
Petra Pjevac* , Marcos Yoshinaga , Eoghan P. Reeves , John V. Marshall , Rudolf Amann ,
1
Anke Meyerdierks
1
2
Max-Planck Institute for Marine Microbiology, Germany, MARUM - Center for Marine
3
Environmental Sciences, Germany, University Bremen, Germany
242A
Vertical distribution of microbial communities in the Zmajevo oko (Rogoznica lake)
during stratified and mixed conditions
1
2
3
2
Petra Pjevac* , Marino Korlević , Elvira Bura Nakić , Sandi Orlić
1
2
Max Planck Institute for Marine Microbiology, Germany, Ruđer Bošković Institute Center for
3
Marine Research, Croatia, Ruđer Bošković Institute Division for Marine and Environmental
Research, Croatia
243A
The magnitude of microbial diversity in different deep-sea sites (basins, slopes,
seamounts) and submarine volcanoes around the Eastern Mediterranean Sea using
pyrosequencing analysis
1
2
1
Paraskevi Polymenakou* , Christos A. Christakis , Nikolaos Lampadariou , Paraskevi
2
3
3
4
Nomikou , Nikos Kyrpides , Konstantinos Mavrommatis , Manolis Mandalakis , Vasilios
1
5
Lykousis , Anastasios Tselepides
1
2
Hellenic Centre for Marine Research, Greece, National and Kapodistrian University of
3
4
Athens, Greece, Joint Genome Institute, Department of Energy, USA, University of Crete,
5
Department of Chemistry, Greece, University of Piraeus, Department of Maritime Studies,
Greece
244A
Phylogenetic diversity among cultivated strains and environmental clones of the
families Streptomycetacea and Micromonosporacea from near-shore marine sediments
1
2
3
Alejandra Prieto-Davo* , Luis Jesús Villarreal-Gómez , Paul Jensen
1
2
Universidad Nacional Autónoma de México, Mexico, Universidad Autónoma de Baja
3
California, Mexico, Scripps Institution of Oceanography, USA
131
PS21 – Microbial Community Diversity
Thursday 23 August
245A
Do apatite deposits select for phosphorus-solubilising bacteria?
1
2
3
2
2
Sabine Ragot* , Josef Zeyer , Helmut Brandl , Gerhard Furrer , Anna Lazzaro
1
Swiss Federal Institute of Technology Zürich, Institute of Agricultural Sciences, Switzerland,
2
Swiss Federal Institute of Technology Zürich, Institute of Biogeochemistry and Pollutant
3
Dynamics, Switzerland, University of Zürich, Institute of Evolutionary Biology and
Environmental Studies, Switzerland
246A
Impact of hydrocarbon compounds on bacterial communities in coastal zones:
development of molecular tools and biosensors
1
2
Md. Matiur Rahman* , Dr. A.K.M Rafiul Islam
1
2
Yamanashi University, Japan, Rajshahi University, Bangladesh
247A
Pseudomonas sp. nov., a novel species isolated from grasses straw in the Peruvian
Altiplano
1
2
2
3
Elena Ramos* , Martha-Helena Ramírez-Bahena , Angel Valverde , Encarna Velázquez ,
4
1
2
Carmen Velezmoro , Doris Zuñiga , Alvaro Peix
1
Laboratorio de Ecología Microbiana y Biotecnología Marino Tabusso, Universidad Nacional
2
Agraria La Molina, Peru, Instituto de Recursos Naturales y Agrobiología. IRNASA-CSIC,
3
Spain, Unidad Asociada Grupo Interacción Planta-Microorganismo, Universidad de
4
Salamanca-IRNASA (CSIC), Spain, Universidad Nacional Agraria La Molina, Peru
317A
16S rRNA analysis of the organic residue composting process adopted at Zoo Park
Foundation of São Paulo - Brazil
1
1
1
Patricia Locosque Ramos* , Bruna Nunes Buscariollo , Leonardo Jun Otuyama , João Batista
2
1
1
1
Cruz , Rafael Costa Santos Rocha , Suzan Pantaroto Vasconcellos , Luiz Juliano Neto
1
2
Universidade Federal de São Paulo, Brazil, Fundação Parque Zoológico de São Paulo,
Brazil
318A
Microbial diversity in brackish water zone of Gwangyang Bay
1
1
1
1
1
Sonny Ramos* , Seong Chan Park , Yeoung Min Hwang , Han Na Choe , Keun Sik Baik ,
2
1
Chul Park , Chi Nam Seong
1
2
Sunchon National University, South Korea, Gwangyang Health College, South Korea
319A
Effects of seasonality and plant chemical diversity on microbial communities in
mediterranean schrubland
1
1
2
2
1
Anais Rancon* , Nicolas Montès , Nathalie Fromin , Stephan Hättenschwiler , Pascal Mirleau
1
2
Aix-Marseille University / Mediterranean Institut of Biodiversity and Ecology, France, Center
of Functional Ecology and Evolution, France
320A
Elucidating the co-diversification of vertebrate animals and their intestinal microbiota
as a basis for molecular detection and source tracking of bacterial faecal pollution in
water
1
1
2
3
Georg Reischer* , Nathalie Schuster , Ruth Ley , Andreas Farnleitner
1
2
3
Vienna University of Technology, Austria, Cornell University, United States, Interuniversity
Cooperation Center Water & Health, Austria
321A
Who is who in litter decomposition? Metaproteomics reveals major microbial players
and their biogeochemical functions
1
2
3
2
Katharina Riedel* , Thomas Schneider , Katharina M. Keiblinger , Emanuel Schmid , Katja
4
5
5
6
2
Sterlinger-Gleixner , Günther Ellersdorfer , Bernd Roschitzki , Andreas Richter , Leo Eberl ,
3
Sophie Zechmeister-Boltenstern
1
2
University of Greifswald / Institute for Microbiology, Germany, Institute of Plant Biology /
3
University of Zurich, Switzerland, University of Natural Resources and Life Sciences (BOKU) /
4
Institute for Soil Research, Austria, University of Natural Resources and Life Sciences
5
(BOKU) / Institute of Applied Microbiology, Austria, University and ETH Zurich / Functional
6
Genomics Center Zurich, Switzerland, University of Vienna / Chemical Ecology and
Ecosystem Research, Austria
132
PS21 – Microbial Community Diversity
Thursday 23 August
322A
Importance of adaptation and functional redundancy for the structure and functioning
of freshwater microbial communities
1
2
3
Mauricio Rocha Dimitrov* , Hauke Smidt , Paul J. Van den Brink
1
2
Wageningen University, Netherlands, Wageningen University / Laboratory of Microbiology,
3
Netherlands, Wageningen University / Department of Aquatic Ecology and Water Quality
Management, Netherlands
323A
Bacterial and eukaryotic diversity in acid mine drainage precipitates following
reclamation with successional plants as revealed by pyrosequencing
1
2
1
Claudia Rojas* , Rosemary Gutierrez , Mary Ann Bruns
1
2
The Pennsylvania State University, United States, University of the Philippines
Baguio, Philippines
324A
Biological Nitrogen Fixation and Bacterial Community Diversity in the Soil of the
Brazilian Atlantic Forest
Emiliana Romagnoli*, Silvia E. Barrera, Fernando D. Andreote, Marcio R. Lambais
1
University of Sao Paulo, Brazil
325A
Quantification of Archaea and Bacteria Domains in the sheep rumen incubated under
two diet conditions
1
1
2
2
Emiliana Romagnoli* , Lucas D. Lopes , Lilia L.R.F Silva , Fernanda M. Nakamura , Maicon
1
1
1
2
2
Sbardella , Rafaela Pereira Weliton D. Silva Adibe L. Abdalla , Siu M. Tsai , Fernando D.
1
3
Andreote Rodrigo Mendes
1
2
Escola Superior de Agricultura Luiz de Queiroz, University of Sao Paulo, Brazil, Centre for
3
Nuclear Energy in Agriculture, University of Sao Paulo, Brazil, Embrapa Environment,
Laboratory of Environmental Microbiology, Brazil
326A
Microbial diversity and composition in the sediment of a laterally subdivided drinking
water reservoir system
1
2
Kerstin Röske* , Isolde Röske
1
2
Sächsische Akademie der Wissenschaften zu Leipzig, Germany, Technische Universität
Dresden, Germany
327A
Diversity and proteomic characterization of saturated and unsaturated LCFA anaerobic
degrading communities
1
2
1
2
Andreia F. Salvador* , Ariane Bize , M. Madalena Alves , Théodore Bouchez , Diana Z.
1
Sousa
1
IBB-Institute for Biotechnology and Bioengineering, Centre of Biological Engineering,
2
University of Minho, Portugal, Irstea, UR HBAN, France
328A
Pyrosequencing enumeration of the bacterial community in the A2O process for the
treatment of municipal sewage
1
1
2
3
3
Byoung In Sang* , Byung-Chun Kim , Seil Kim , Taesub Shin , Hyunook Kim
1
2
Hanyang University, South Korea, Korea Institute of Science and Technology, South
3
Korea, University of Seoul, South Korea
329A
Eikelboom Type 0581: characterization of an uncommon filamentous morphotype in
Portuguese activated-sludge systems
1
2
2
2
Liliana Santos* , Marta Neto , Alcina Pereira , Ana Nicolau
1
2
University of Minho, Portugal, University of Minho / IBB, Portugal
330A
Planktonic and attached microbes in deep subsurface
1
2
1
1
1
Yoshito Sasaki* , Takahiro Asano , Kotaro Ise , Yuki Amano , Tomofumi Sato , Hiroaki
1
1
1
1
Murakami , Hiroki Amamiya , Teruki Iwatsuki , Hideki Yoshikawa
1
2
Japan Atomic Energy Agency (JAEA), Japan, CHUGAI TECHNOS Corporation, Japan
133
PS21 – Microbial Community Diversity
Thursday 23 August
331A
Empirical metadata-based quality testing for operational taxonomic units
Sebastian Schmidt*, João F. Matias Rodrigues, Christian von Mering
Institute for Molecular Life Sciences, University of Zurich, Switzerland
332A
Effects of ozone and nitrogen deposition on alpine soil microbial communities
1
2
3
3
3
Salome Schneider* , Martin Hartmann , Seraina Bassin , Matthias Volk , Jürg Fuhrer , Franco
4
Widmer
1
Molecular Ecology, Agroscope Reckenholz-Tänikon Research Station ART, Switzerland,
2
Rhizosphere Processes, Swiss Federal Research Institute WSL, Birmensdorf, Switzerland,
3
Air Pollution and Climate, Agroscope Reckenholz-Tänikon Research Station ART, Zurich,
4
Switzerland, Molecular Ecology, Agroscope Reckenholz-Tänikon Research Station ART,
Zurich, Switzerland
333A
A less biased primer combination resulting in a more representative description of
fungal communities
Ursel Schuette*, Jim Bever, Anna Rosling
Indiana University, United States
334A
Bacterial community changes as potential bioindicators for hydrocarbon contamination
in coastline environments in Rio de Janeiro, Brazil
Lucy Seldin, Diogo Jurelevicius Jurelevicius*, Vanessa Alvarez, Joana Marques, Felipe Dias
Universidade Federal do Rio de Janeiro (UFRJ), Brazil
335A
Bacterial community structure associated with the anode of sediment microbial fuel
cells from the Red Sea and Tampa Bay sediment: revealed by 16s rRNA gene
pyrosequencing
1
1
1
2
Noura Shehab* , Pascal Saikaly , Gary Amy , Buce Logan
1
2
King Abdullah University of Science and Technology, Saudi Arabia, Penn State
University, USA
336A
Application of stable isotope probing in a marine bioremediation study to identify
aerobic benzene degrading microorganisms
Petra Sheppard*, Andrew Ball
Royal Melbourne Institute of Technology, Australia
337A
Changes in the intestinal microflora diversity of thirteen-lined ground squirrels during
Victor Sherony*, Bonita Bratina
University of Wisconsin-La Crosse, United States
338A
Investigating the Bacterial Community in Marine Sediment and Dead Ark Clams on the
South Coast of Korea using a Culture-dependent Approach
Na-Ri Shin*, Min-Soo Kim, Mi-Ja Jung, Tae Woong Whon, Jin-Woo Bae
Kyung Hee University, South Korea
339A
Bacterial diversity of activated sludge treating saline wastewater of waterway oil
terminal
1
2
1
2
Cynthia Canedo Silva* , Livia C F Silva , Samantha Fonseca , Vinicius D Silva , Roberto D
2
3
3
3
2
Sousa , Rodrigo S Souza , Maira P Sousa , Ana Paula R Torres , Sergio O De Paula , Valeria
1
M Oliveira
1
2
3
UNICAMP, Brazil, Federal University of Vicosa, Brazil, Petrobras, Brazil
340A
Molecular microbial diversity in New Zealand groundwater
1
2
3
3
1
Kosala Sirisena* , Christopher Daughney , Craig Herbold , Charles Lee , Ken Ryan , Geoffrey
1
Chambers
1
School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand,
2
3
Institute of Geological and Nuclear Sciences, Lower Hutt, New Zealand, Department of
Biological Sciences, University of Waikato, Hamilton, New Zealand
134
PS21 – Microbial Community Diversity
Thursday 23 August
341A
Changes of microbial diversity during bioremediation of PAH contaminated woodchips
by composting
Branislav Slavik*, Eva Burianova, Kamila Cajthamlova, Tomas Cajthaml
Institute of Microbiology, AS CR, Czech Republic
342A
Impact of heavy metals on archaeal and bacterial communities in upland soils
Jaekyeong Song*, Jae-Hyung Ahn, Byung-Yong Kim, Hang-Yeon Weon, In-Cheol Park
National Academy of Agricultural Science, South Korea
343A
Microbiology of ammonia oxidation in the Grand River: disentangling molecular
signatures of wastewater effluent from autochthonous prokaryotic communities
Puntipar Sonthiphand*, Eduardo Cejudo, Sherry L. Schiff, Josh D. Neufeld
University of Waterloo, Canada
344A
Biochar effect on bacterial structure communities, soil and soybean (G. max) root
system
1
2
2
Janne Louize Sousa Santos , Clovis Daniel Borges , Danielle Gregório Gomes Caldas , Beata
3
2
Emoke Madari , Siu Mui Tsai*
1
Federal University Of Goiás (Ufg)/Center For Nuclear Energy In Agriculture (Cena), Brazil,
2
3
Center For Nuclear Energy In Agriculture (Cena), Brazil, Embrapa Rice and Bean/Federal
University Of Goiás Brazil
345A
Prevalence of chitinolytic bacteria of Aeromonas genus in an aquatic environment with
high anthropogenic pollution
1
1
2
1
Claudiana Souza , Maicon Passine , Edith Mariela Burbano-Rosero , Bianca Almeida ,
3
1
Cristine Barreto , Irma Rivera*
1
2
University of São Paulo / Institute of Biomedical Science, Brazil, Universidad de Nariño,
3
Colombia, Universidade Católica de Brasília, Brazil
346A
Development of a dynamic in vitro model for the human ileum
1
2
2
3
3
Maria Stolaki* , Erwin G. Zoetendal , Eddy J. Smid , Mans Minekus , Koen Venema , Michiel
4
Kleerebezem
1
2
Wageningen University, Netherlands, Wageningen University/Top Institute of Food and
3
Nutrition, Netherlands, TNO Quality of Life/Top Institute of Food and Nutrition, Netherlands,
4
Wageningen University/NIZO Food Research/Top Institute of Food and Nutrition, Netherlands
347A
Estimation of biphenyl dioxygenase diversity in soils using gene-targeted
metagenomics
Michal Strejcek*, Ondrej Uhlik, Lucie Musilova, Tomas Macek, Martina Mackova
Institute of Chemical Technology Prague, Czech Republic
348A
Linking the soil functioning with the microbial diversity in the agricultural soils across
The Netherlands
Agnieszka Szturc-Koetsier*, Gerdit Greve, Heike Schmitt
Utrecht University, Netherlands
349A
Impacts of Oxytetracycline on Performance of Thermophilic Anaerobic Manure
Digesters and Active Microbial Population
Fulya Süzen*
Istanbul Technical University/Institute of Sciences, Turkey
350A
Characterization of a Vibrio spp community in the English Channel through pyrH and
toxR gene partial sequencing during a warm and a cold water period
1
2
3
1
1
Amadou Tall* , Aurélie Touron-Bodilis , Régis Delesmont , Elvire Antajan , Anna Teillon ,
1
1
1
1
1
Margot Legoff , Emilie Troadec , David Richard , Claire Boisset , Dominique Hervio-Heath
1
2
3
IFREMER, France, EDF R&D, France, Eurofins IPL Environnement, France
135
PS21 – Microbial Community Diversity
Thursday 23 August
273A
Characterization of bacterial communities associated with Pistacia lentiscus L. from the
abandoned Sardinian mining area
1
2
2
2
3
Elena Tamburini* , Simona Sergi , Daniela Cau , Paolo La Colla , Giovanna Cappai ,
3
4
Alessandra Carucci , Gianluigi Bacchetta
1
2
Dept. of Biomedical Sciences, University of Cagliari, Italy, Section of General Microbiology
and Virology & Microbial Biotechnologies, Dept. of Biomedical Sciences, University of Cagliari,
3
09042 Monserrato (CA), Italy, Dept. of Civil-Environmental Engineering and Architecture,
4
University of Cagliari, Piazza d'Armi, 09123 Cagliari (CA) Italy, Italy, Biodiversity
Conservation Centre, Dept. of Life and Environmental Sciences, University of Cagliari, Viale S.
Ignazio 13, 09123 Cagliari (CA), Italy
274A
Metabolic potential of microbial community in a subtropical freshwater little changed by
a level-5 typhoon attack
1
2
1
1
Sen-Lin Tang* , Ching-Hung Tseng1 Tseng , Pei-Wen Chiang , Jia-Rong Liou , Yi-Long
3
3
3
Chen , Ting-Chang Hsu , Fuh-Kwo Shiah
1
2
Biodiversity Research Center, Academia Sinica, Taiwan, TIGP on Bioinformatics, Academia
3
Sinica, Taiwan, Research Center for Environmental Changes, Academia Sinica, Taiwan
275A
Primer choice matters: the comparison of eight 454-pyrosequencing primer pairs on
soil bacterial community profile
Anna Taskinen, Marja Tiirola, Sari Peura
University of Jyväskylä/Department of Biological and Environmental Sciences, Finland
276A
Deep sequencing of 16S rRNA gene to efficiently assess bacterial richness and the rare
biosphere in soils
1
1
2
2
Sebastien Terrat* , Samuel Dequiedt , Dipankar Bachar , Richard Christen , Christophe
1
1
1
3
4
Mougel , Mélanie Lelièvre , Pierre-Alain Maron , Pierre Plassart , Patrick Wincker , Corinne
4
5
5
6
3
Cruaud , Claudy Jolivet , Dominique Arrouays , Antonio Bispo , Philippe Lemanceau , Lionel
1
Ranjard
1
2
GenoSol platform - UMR 1347 Agrosup/uB/INRA, France, Nice University - UMR 6543 3
Virtual Biology Laboratory, France, UMR 1347 Agroecology Agrosup/uB/INRA, France,
4
French Alternative Energies and Atomic Energy Commission - Genomic Institute-Genoscope,
5
6
France, US 1106 - INFOSOL Unit, France, ADEME - Forest and Agricultural Service, France
277A
Bacterial identity and distribution on marine snow aggregates – implications for the
biological carbon pump
1
1
1
2
Stefan Thiele* , Bernhard M. Fuchs , Rudolf Amann , Morten H. Iversen
1
2
MPI for Marine Microbiology, Germany, MARUM - University of Bremen, Germany
278A
Bacterial community structure and function in relation to highly variable environmental
conditions in a dynamic coastal ecosystem (the Gulf of Trieste, Northern Adriatic)
Tinkara Tinta*, Jana Vojvoda, Valentina Turk
National institute of Biology, Marine Biology Station Piran, Slovenia
279A
A comparative study of the gastrointestinal microbiota of two freshwater aquaculture
species
Phillip Titus*, Lourens De Wet, Karin Jacobs
Stellenbosch University, South Africa
280A
Evaluation of oligonucleotide probe-based gene capture for recovering environmental
functional gene diversity
Tomohiro Tobino*, Kazuo Yamamoto
The University of Tokyo, Japan
281A
Differential extraction of extracellular and intracellular DNA from marine sediments
1
1
2
2
1
Andrea Torti* , Mark Alexander Lever , Yuki Morono , Fumio Inagaki , Bo Barker Jørgensen
1
2
Center for Geomicrobiology, Aarhus University, Denmark, Kochi Institute for Core Sample
Research, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Japan
136
PS21 – Microbial Community Diversity
Thursday 23 August
282A
Characterization of cellulolytic symbionts among core gut microbiota in captive giant
pandas (Ailuropoda melanoleuca)
1
2
3
1
Hein Min Tun* , Nathalie Mauroo , Chan San Yuen , Mabel Ting Wong , Frederick Chi-Ching
1
Leung
1
2
School of Biological Sciences, The University of Hong Kong, Hong Kong, Department of
3
Pathology, The University of Hong Kong, Hong Kong, Clinical Laboratory, Veterinary Center,
Ocean Park Corporation, Hong Kong
283A
Characteristics of the bacterial community exposed to jellyfish
1
2
2
2
Valentina Turk* , Tinkara Tinta , Maja Kos , Alenka Malej
1
2
National institute of Biology, Marine Biology Station Piran, Slovenia, National Institute of
Biology, Marine Biology Station Piran, Slovenia
284A
Metabolically active bacteria during biotransformation of aromatic pollutants in
contaminated soil
1
1
1
1
2
2
Ondrej Uhlik* , Michal Strejcek , Lucie Musilova , Jiri Wald , Jakub Ridl , Miluse Hroudova ,
2
1
1
Cestmir Vlcek , Martina Mackova , Tomas Macek
1
2
Institute of Chemical Technology Prague, Czech Republic, Institute of Molecular Genetics,
Czech Academy of Sciences, Czech Republic
285A
Comparative Microbial Diversity in Organically Rich Sedimentary Basins, Coal and
Shale, and Oil Reservoirs in the Deep Continental Subsurface
1
2
2
Burcu Unal* , Vicente Gomez-Alvarez , Klaus Nüsslein
1
2
University of Massachusetts, Amherst, USA, U.S. Environmental Protection Agency,
Cincinnati, USA
285B
Application of Illumina-based microbial community analysis for water quality
monitoring in freshwater ecosystems
1
2
3
3
3
Tatsuya Unno* , Sangjung Park , Trevor Gould , Bruce Jarvis , Jane Phillips , Michael
3
Sadowsky
1
2
Jeju National University, South Korea, National Institute of Environmental Research, USA,
3
University of Minnesota, USA
286A
Feeding yacon tuber increases intestinal fermentation and alters microbial community
structure in rats
1
1
1
2
Ni Wayan Arya Utami* , Michiko Tanaka , Teruo Sone , Cindy Hatsuyo Nakatsu , Kozo
1
Asano
1
2
Hokkaido University, Japan, Purdue University, United States
287A
Diversity of wood-inhabiting fungi affects decomposition activity in Norway spruce
wood
1
2
2
3
2
Lara Valentín* , Tiina Rajala , Mikko Peltoniemi , Jussi Heinonsalo , Taina Pennanen , Raisa
2
Mäkipää
1
2
Autonomous University of Barcelona, Spain, Finnish Forest Research Institute, Finland,
3
University of Helsinki, Finland
288A
Characterisation of small intestinal Streptococcus and Veillonella populations
Bartholomeus van den Bogert*, Oylum Erkus, Kun Xie, Eddy J. Smid, Erwin G. Zoetendal,
Michiel Kleerebezem
Wageningen University, Netherlands
289A
Structure and diversity of bacteria and Archaea communities in sediments from
Tropical Mangroves
1
2
1
Maryeimy Varón Lopez , Eiko Kuramae* , Fernando Dini Andreote
1
Department of Soil Science, “Luiz de Queiroz” College of Agriculture, University of Sao Paulo
2
(ESALQ/USP), Brazil, Netherlands Institute of Ecology (NIOO/KNAW), Netherlands
137
PS21 – Microbial Community Diversity
Thursday 23 August
290A
SIP 2.0: Multi-substrate isotope labeling and metagenomic analysis of active soil
bacteria
Yris Verastegui*, Katja Engel, Trevor C. Charles, Josh D. Neufeld
University of Waterloo, Canada
291A
Endozoicomonas prevail the microbiome of the coral Stylophora pistillata
1
1
1
1
1
Christian Voolstra , Matthew Neave* , Areej Alsheikh-Hussain , Manuel Aranda , Till Bayer ,
2
Amy Apprill
1
2
KAUST, Saudi Arabia, WHOI, USA
292A
Improved analysis of fungal communities using the next-generation-sequencing
analysis of single copy gene
1
2
2
2
2
Tomáš Větrovský* , Miroslav Kolařík , Lucia Žifčáková , Jana Voříšková , Petr Baldrian
1
2
Institute of Microbiology AS CR, Czech Republic, Institute of Microbiology of the ASCR,
Czech Republic
293A
Gut microbiome of the critically endangered New Zealand parrot, the kakapo (Strigops
habroptilus)
1
2
3
David Waite* , Peter Deines , Mike Taylor
1
2
University of Auckland, New Zealand, Institute of Natural Sciences, Massey University, New
3
Zealand, Centre for Microbial Innovation, School of Biological Sciences, University of
Auckland, New Zealand
294A
Phylogenetic clustering increases with elevation for microbes
1
2
1
3
Jianjun Wang* , Janne Soininen , Ji Shen , Jizheng He
1
Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, China,
2
3
Department of Geosciences and Geography, University of Helsinki, Finland, State Key
Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences,
Chinese Academy of Sciences, China
295A
Enrichment and characterization of PCB dechlorinators in sediment-free Aroclor 1260
dechlorinating cultures
Shanquan Wang*, Jianzhong He
National University of Singapore, Singapore
296A
Fungal community structure and temporal variations in the Songhua River basin, China
Yingying Wang*, Jie Liu, Jianan Wang
Nankai University, China
297A
Ribotag analysis of microbial communities linked to rice straw degradation
Carl-Eric Wegner*, Yongkyu Kim, Werner Liesack
Max Planck Institute for Terrestrial Microbiology, Germany
297B
Functional metagenomics reveals previously unrecognized diversity of antibiotic
resistance genes in gulls
1
2
2
2
3
Claudia Weihe* , Adam C. Martiny , Jennifer B.H. Martiny , Andrew Fields , Julie C. Ellis
1
2
3
UC Irvine, United States, UC Irvine, USA, Tufts University, USA
298A
Metatranscriptomics of the Roseobacter clade
Bernd Wemheuer*, Simon Guellert, Dimitri Meier, Rolf Daniel
Georg-August University of Goettingen / Institute of Microbiology and Genetics, Germany
299A
Multitrophic interaction between microorganisms, plants and herbivores: Does
fertilizing, mowing or herbivore damage alter the microbial community composition in
the rhizosphere?
Franziska Wemheuer*, Stefan Vidal
Georg-August University of Göttingen / Department for Crop Sciences, Germany
138
PS21 – Microbial Community Diversity
Thursday 23 August
300A
Bacterial communities associated with coral in Singaporean waters reveals sitespecificity and transplant-locale specificity
1
2
3
4
Wang Wenwen* , Bassy Wong ChingChing , Ole Larsen , Peter D. Steinberg , Staffan
5
6
Kjelleberg , Diane McDougald
1
2
Nanyang Technological University/ School of Biological Science, Singapore, Nanyang
3
Technological University/ School of Biological Sciences, Singapore, DHI Water and
4
Environment, Singapore, Sydney Institute of Marine Sciences, Chowder Bay Rd, Mosman,
5
Australia, Nanyang Technological University/ Singapore Centre on Environmental Life
6
Sciences Engineering, Singapore, the University of New South Wales/Centre for Marine BioInnovation, School of Biotechnology and Biomolecular Sciences, Australia
301A
Metagenomic characterization of airborne viral DNA diversity in the near-surface
atmosphere
Tae Woong Whon*, Min-Soo Kim, Seong Woon Roh, Na-Ri Shin, Hae-Won Lee, Jin-Woo Bae
Kyung Hee University, South Korea
301B
Highly variable depth profiles and distribution of Chloroflexi sub-groups in a sediment
transect across a dynamic estuary
Angharad Williams*, R. John Parkes, Jose Constantine, Andrew Weightman
Cardiff University, United Kingdom
302A
A metagenomic perspective on improved bioreactor methane yield using waste
activated sludge after pH 10 pretreatment
1
2
1
1
1
Mabel Ting Wong* , Dong Zhang , Jun Li , Raymond Kin Hi Hui , Hein Min Tun Tun ,
1
1
2
1
Manreetpal Singh Brar , Tae-Jin Park , Yinguang Chen , Frederick C. Leung
1
2
The University of Hong Kong, Hong Kong, Tongji University, China
303A
Profile analyses of sporulation genes reveal underrepresentation of endospore-forming
bacteria in metagenomes
Tina Wunderlin*, Thomas Junier, Ludovic Roussel-Delif, Pilar Junier
Neuchâtel, Switzerland
304A
Functional diversity of microbial communities in three full-scale wastewater treatment
systems in Shenzhen
1
1
2
1
Yu Xia* , Xiaohui Wang , Jizhong Zhou , Xianghua Wen
1
Environmental Simulation and Pollution Control State Key Joint Laboratory, School of
2
Environment, Tsinghua University, 100084, Beijing, P.R. China, China, Institute for
Environmental Genomics and Department of Botany and Microbiology, University of
Oklahoma, Norman,Oklahoma 73072, USA
304B
Detection and identification of microbes in prosthetic joint infections by culture and
molecular methods
1
2
3
1
1
Yijuan Xu* , Henrik C. Schønheyder , Garth D. Ehrlich , Per H. Nielsen , Trine R. Thomsen
1
2
Aalborg University, Section of Biotechnology, Denmark, Department of Clinical Microbiology,
3
Aalborg Hospital, Aarhus University Hospital, Denmark, Center for Genomic Sciences,
Allegheny-Singer Research Institute, Allegheny General Hospital, United States
305A
The herbivorous giant panda harbors a carnivore-like gut microbiota structure with
large temporal variability: a co-evolutionary dead end?
1
2
2
1
1
Zhengsheng Xue* , Wenping Zhang , Lisong Fei , Menghui Zhang , Linghua Wang , Xiaojun
1
2
2
1
2
1
Zhang , He Huang , Rong Hou , Liping Zhao , Zhihe Zhang , Xiaoyan Pang
1
State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology,
2
Shanghai Jiao Tong University, China, Chengdu Research Base of Giant Panda Breeding,
China
306A
Biodiversity and community successions of denitrifying bacteria in response to poly(Llactic acid) as the sole substrate in solid-phase denitrification processes
Takeshi Yamada*, Hideto Tsuji, Akira Hiraishi
Toyohashi University of Technology/ Department of Environmental and Life Sciences, Japan
139
PS21 – Microbial Community Diversity
Thursday 23 August
307A
Huge diversity of marine eukaryotic picoplankton in Sendai Bay, Japan: using nextgeneration sequencing approach for meta 18S rDNA analyses
1
1
2
1
Haruyo Yamaguchi* , Mikihide Demura , Akira Kuwata , Masanobu Kawachi
1
2
National Institute for Environmental Studies Japan, Tohoku National Fisheries Research
Institute Japan
308A
Characterizing bacterial community and human health impact during Asian dust events
in Korea
1
1
2
3
1
Keunje Yoo* , Jung Min Han , Lim-Seok Chang , James Tiedje , Joonhong Park
1
2
Yonsei University, South Korea, National Institute of Environmental Research, South Korea,
3
Center for Microbial Ecology, Michigan State University, United States
309A
Dynamics of methanogenic archaeal community and biogas production in mesophilic
and thermophilic anaerobic co-digestion processes
1
1
2
2
2
Dan Yu* , Jukka Kurola , Maritta Kymäläinen , Kirsi Lähde , Helena Kautola , Martin
1
Romantschuk
1
2
University of Helsinki, Finland, HAMK University of Applied Sciences, Finland
310A
Insects gut bacterial communities determined by host's environmental niches and diets
1
1
1
2
3
Ji-Hyun Yun* , Seong Woon Roh , Tae Woong Whon , Doo-Sang Park , Changmann Yoon ,
1
1
1
1
1
3
Mi-Ja Jung , Young-Do Nam , Yun-Ji Kim , Jung-Hye Choi , Joon-Yong Kim , Gil-Hah Kim ,
1
Jin-Woo Bae
1
2
Kyung Hee University, South Korea, Korea Research Institute of Bioscience&Biotechnology,
3
South Korea, Chungbuk National University, South Korea
310B
Diversity of dsrA and nifD genes in saline produced waters of offshore oil reservoirs
1
1
1
2
Icoquih Zapata-Peñasco* , Lucia Salazar Coria , Maria Saucedo , Lourdes Villa Tanaka ,
2
Cesar Hernandez Rodriguez
1
2
Mexican Petroleum Institute, Mexico, National Polytechnic Institute, Mexico
311A
Bisulfite reductase diversity and activity in connate waters from high temperature oil
reservoirs
1
1
1
2
Icoquih Zapata-Peñasco* , Lucia Salazar Coria , Maria Saucedo , Lourdes Villa Tanaka ,
2
Cesar Hernandez Rodriguez
1
2
Mexican Petroleum Institute, Mexico, National Polytechnic Institute, Mexico
312A
Bacterial Diversity in termal springs in desert zones: Ojo de Dolores, Jimenez,
Chihuahua, Mexico
Francisco Javier Zavala Diaz de la Serna*, Jaime Alberto Reyna-Amparan, Rosario PeraltaPerez, Virginia Nevarez-Moorillon
Universidad Autonoma de Chihuahua/Facultad de Ciencias Quimicas, Mexico
313A
Involvement of a Dehalobacter species in the debromination of Tetrabromobisphenol A
1
2
2
2
3
Chunfang Zhang* , Zhiling Li , Daisuke Suzuki , Lizhen Ye , Naoko Yoshida , Arata
2
Katayama
1
2
3
Nagoya University, Japan, EcoTopia Science Institute,Nagoya University, Japan, EIIRIS,
Toyohashi University of Technology, Japan
314A
Membrane biofouling and influence of salinity on microbial community composition in
an FOMBR
1
1
1
2
2
Qiaoyun Zhang* , Wei Jie Yap , Diane McDougald , Winson C.l.lay , Jinsong Zhang , Bertil
1
3
2
1
Schmidt , Torsten Thomas , Anthony Fane , Staffan Kjelleberg
1
2
Nanyang Technological University, Singapore, Singapore Membrane Technological Center,
3
Singapore, University of New South Wales, Australia
140
PS21 – Microbial Community Diversity
Thursday 23 August
315A
Effects of low temperature on lactic acid bacteria diversity during whole-plant corn
ensiling process
1
1
2
Yi-Qin Zhou* , Pascal Drouin , Carole Lafrenière
1
2
Université du Québec en Abitibi-Témiscamingue, Canada, Agriculture and Agri-Food
Canada, Canada
316A
Spatio-temporal patterns of microbial communities in a hydrologically dynamic pristine
aquifer
1
2
2
Yuxiang Zhou* , Claudia Kellermann , Christian Griebler
1
2
Helmholtz Zentrum Munich/Institute of Groundwater Ecology, Germany, Helmholtz Zentrum
Munich, Germany
316B
Lean breed Landrace pigs harbor fecal methanogens at higher diversity and density
than obese breed Erhualian pigs
1
2
3
4
Wei-Yun Zhu* , Yu-heng Luo , Andre-Denis G. Wright , Hauke Smidt
1
2
3
Nanjing Agricultural University, China, Nanjing Agricultural Univeristy, China, University of
4
Vermont, USA, Wageningen University, Netherlands
PS22 – Microbial Disease Ecology
351A
Virulence and antibiotic resistance properties of Stenotrophomonas maltophilia linked
to ecological niche adaptation
1
2
2
2
Nolwenn Alliot* , Amélie Deredjian , Sylvie Nazaret , Sabine Favre-Bonté
1
2
Université Lyon 1, UMR CNRS 5557 Ecologie Microbienne, France, Université Lyon 1, UMR
CNRS 5557 Ecologie Microbienne, France
352A
DNA markers for detection and infrasubspecific discrimination of prevalent bovine
mastitis-causing Streptococcus
1
2
3
4
2
Alexandre Almeida , Pedro Albuquerque , Ricardo Araújo , Niza Ribeiro , Fernando Tavares*
1
FCUP - Faculdade de Ciências, Departamento de Biologia, Edifício FC4, Via Panorâmica no.
2
36, Universidade do Porto, 4150-564 Porto, Portugal, CIBIO - Centro de Investigação em
Biodiversidade e Recursos Gene´ ticos, Universidade do Porto, Campus Agrário de Vairão,
3
4485-661 Vairão, Portugal, IPATIMUP - Instituto de Patologia e Imunologia da Universidade
4
do Porto, Rua Dr. Roberto Frias s/n, 4200-465 Porto, Portugal, Portugal, Segalab Laboratório de Sanidade e Segurança Alimentar, Portugal
353A
Gene regulation and the cost of antibiotic resistance
1
2
1
Daniel Angst* , Martin Ackermann , Sebastian Bonhoeffer
1
2
Institute for Integrative Biology, ETH Zürich, Switzerland, Institute for Biogeochemistry and
Pollutant Dynamics, ETH Zürich, Switzerland
354A
Bacterial consortium associated with Black Band Disease in Red Sea corals
1
1
1
2
2
Luba Arotsker* , Nachshon Siboni , Eitan Ben-Dov , Esti Kramarsky-Winter , Yossi Loya ,
1
Ariel Kushmaro
1
2
Ben-Gurion University of the Negev, Israel, Tel Aviv University, Israel
355A
Expression of the blood-group-related glycosyltransferase B4galnt2 influences the
intestinal microbiota and susceptibility to Salmonella enterica serovar Typhimurium in
house mice
1
2
3
2
John Baines* , Natalie Steck , Jill Johnsen , Guntram Grassl
1
2
Max-Planck-Institute for Evolutionary Biology, Germany, Leibniz Research Center Borstel
3
and Christian-Albrechts-University of Kiel, Germany, Puget Sound Blood Center, University of
Washington, Seattle, USA
141
PS22 – Microbial Disease Ecology
Thursday 23 August
355B
Shifts in gut microbiome community dynamics: a new paradigm for giardiasis
1
2
2
1
Nanelle Barash* , Jenny Maloney , Steven Singer , Scott Dawson
1
2
UC Davis, United States, Georgetown University, United States
356A
The resident skin microbiota of the frog Phylomedusa distincta and the animal defense
system against pathogens
1
1
1
2
2
Cristine Barreto* , Cristiane dos Santos , Flavia Dutra , Ananda de Assis , Carlos Navas ,
1
Beatriz Magalhaes
1
2
Universidade Catolica de Brasilia, Brazil, Universidade de Sao Paulo, Brazil
357A
Survival and leaching of Tetracycline resistant bacteria and E. coli from manure in field
scale experiments
1
1
2
2
1
Tina Bech* , Jeanne Kjaer , Preben Olesen , Mostofa Amin , Carsten Suhr Jacobsen
1
2
GEUS, Denmark, University of Aarhus, Denmark
358A
Attachment of E. coli and Salmonella species in runoff under influence of
polyacrylamide
1
2
1
2
Tina Bech* , Adrian Sbodio , Carsten Suhr Jacobsen , Trevor Suslow
1
2
GEUS, Denmark, University of California, United States
359A
Distribution and composition of Borrelia burgdorferi communities in tick populations
across central Britain
1
2
1
1
Richard Birtles* , Judy Bettridge , Natalie McConville , Kevin Bown
1
2
University of Salford, United Kingdom, University of Liverpool, United Kingdom
360A
Reliability of qPCR for quantification of bacterial pathogens in highly PCR-inhibiting
environments: Application of an integrative concept for Vibrio cholerae
1
1
2
1
3
Rupert Bliem* , Sonja Schauer , Helga Plicka , Regina Sommer , Georg Reischer , Andreas
3
1
Farnleitner , Alexander Kirschner
1
2
Medical University Vienna, Austria, Austrian Ministry for Defence and Sports, Austria,
3
Vienna University of Technology, Austria
361A
Some epidemiological factors related to occurrence of shiga toxin producing E. coli
(STEC) in calves, cattle and man in some Egyptian localities
1
2
Ahmed Byomi* , Hamed Samaha
1
2
Fac. of Vet. Medicine, Menoufia University, Egypt, Alexandria University, Egypt
361B
Mucin-2's role in the potential inhibition of probiotics in meningitic Escherichia coli K1
E44 adherence to intestinal epithelial cells
Hong Cao*, Jingyi Yu, Min Long, Meiqin Fu, Yarong Qu, Yangming Wen, Like Zhang,
Wenbing Zhang, Lili Zhang, Xueling Li
Southern Medical University, China
362A
Ecological diversity of cereulide-producing strains of Bacillus cereus and Bacillus
weihenstephanensis
1
2
3
Virginie Castiaux* , Izabela Swiecicka , Jacques Mahillon
1
2
UCLouvain / Earth and Life Institute, Belgium, University of Bialystock / Institute of Biology /
3
Department of Microbiology, Poland, UCLouvain / Earth and Life Institute/Applied
Microbiolgy, Belgium
363A
High abundance of pathogenic bacteria in Kuala Sepetang tropical mangrove estuary,
Malaysia
1
2
2
2
Lay Ching Chai* , Aziz Ghaderpour , Nazrin M. Nasori , Kwai Lin Thong
1
2
Institute of Biological Sciences, Malaysia, Institute of Biological Sciences, University of
Malaya Malaysia
142
PS22 – Microbial Disease Ecology
Thursday 23 August
364A
The effect of whole-grain compared to refined wheat on the gut microbial composition
and integrity in a colonic epithelial cell model following a 12-week energy-restricted
dietary intervention in postmenopausal women
1
1
2
1
Ellen Gerd Christensen* , Tine Rask Licht , Mette Kristensen , Martin Iain Bahl
1
2
Technical University of Denmark, DTU Food, Denmark, University of Copenhagen, Dept. of
Nutrition, Denmark
365A
Intestinal colonization, gut function and inflammatory responses are moderately
influenced by gestational age at birth
1
1
2
2
1
Malene Cilieborg* , Kerstin Skovgaard , Linn Nørgaard , Per Sangild , Mette Boye
1
2
Technical University of Denmark, Denmark, University of Copenhagen, Denmark
366A
The soil resistome: The anthropogenic, the native, and the unknown
1
2
2
3
4
Eddie Cytryn* , Joao Gatica-Arias , Yael Negreanu , Kun Yang , Zohar Pasternak , Edouard
4
3
Jurkevitch , Tao Yan
1
2
Volcani Agricultural Research Center, Israel, Institute for Soil, Water and Environmental
3
Sciences, Volcani Agricultural Research Center, Israel, Department of Civil and
4
Environmental Engineering, University of Hawaii, USA, The Robert H. Smith Faculty of
Agriculture, Food and Environment, The Hebrew University of Jerusalem, Israel
366B
Fine-tuned bistability stabilizes the cooperation-based intestinal virulence of
Salmonella
1
2
2
3
1
Médéric Diard* , Victor Garcia , Roland Regoes , Martin Ackermann , Wolf-Dietrich Hardt
1
2
Institute of Microbiology, D-BIOL, ETH Zürich, Switzerland, Department of Environmental
3
Sciences, ETH Zurich, Switzerland, Department of Environmental Microbiology, Eawag,
Switzerland
367A
The fpvB gene, encoding an alternative type I ferripyoverdine receptor, can be lost
during long-term colonization of the cystic fibrosis lung by Pseudomonas aeruginosa
1
2
3
1
4
Jozef Dingemans* , Aurélie Crabbé , Rob Van Houdt , Pierre Cornelis , Anne Malfroot
1
2
VUB, Belgium, Center for Infectious Diseases and Vaccinology, Arizona State University,
3
4
USA, Belgian Nuclear Research Centre, Belgium, UZ Brussels, Belgium
368A
Establishment of mass spectrometric profiling in Vibrio Population analyses
Rene Erler*, Gunnar Gerdts, Antje Wichels
Alfred Wegener Institute for Polar and Marine Research, Germany
369A
Interactions of the pathogenic bacterium Listeria monocytogenes with protozoa and
plants: a way for the pathogen to succeed in the nature
1
1
1
2
Svetlana Ermolaeva* , Valentina Pushkareva , Lyubov Didenko , Galina Godova , Artem
2
1
Ovod , Viktor Litvin
1
Gamaleya Research Institute of epidemiology and Microbiology, Russian Federation,
2
Timiryazev Agricultural Academy, Russian Federation
370A
Evaluation of the virulence of the fish pathogen Vibrio anguillarum using a gnotobiotic
sea bass (Dicentrarchus labrax) model
1
2
3
1
1
Ingeborg Frans , Kristof Dierckens , Chris Michiels , Kris Willems , Bart Lievens* , Peter
2
1
Bossier , Hans Rediers
1
Laboratory for Process Microbial Ecology and Bioinspirational Management-Consortium for
Industrial Microbiology and Biotechnology (CIMB)- KU Leuven Association, Belgium,
2
3
Laboratory of Aquaculture & Artemia Reference Center, Ghent University, Belgium, Centre
for Food and Microbial Technology, KU Leuven, Belgium
371A
Adaptation to lungs of cystic fibrosis patients leads to reduced virulence and lowered
resistance against natural protist and phage enemies in Pseudomonas aeruginosa
1
2
1
Ville-Petri Friman* , Melanie Ghoul , Angus Buckling
1
2
University of Exeter, United Kingdom, University of Oxford, United Kingdom
143
PS22 – Microbial Disease Ecology
Thursday 23 August
371B
Anthropogenic impacts on selection for antibiotic resistance in the soil environment
1
1
2
3
William Gaze , Lihong Zhang* , Peter Hawkey , Elizabeth Wellington
1
2
European Centre for Environment and Human Health, United Kingdom, University of
3
Birmingham, United Kingdom, University of Warwick, United Kingdom
372A
Detection and characterization of Morganella morganii isolated from medicinal leeches
1
2
1
2
1
Stefanie Glaeser* , Nathalie Fleischer , Danh Biesgen , Harald Galatis , Peter Kämpfer
1
2
Justus-Liebig-University Giessen, Germany, Biebertaler Blutegelzucht, Germany
373A
The microbial ecology of childhood caries by 16s rRNA community analysis
Ann Griffen*, Clifford Beall, Erin Gross, Eugene Leys
The Ohio State University, United States
374A
Adaption of bacteria to ameliorate the metabolic burden of carrying antibiotic
resistance genes (a systems bioecology modeling analysis)
Ferdi Hellweger*
Northeastern University, United States
374B
The biotic reservoirs of Vibrio cholerae at geothermal sites at the Icelandic coast
Herdís Eva Hermundardóttir*
2
University of Iceland/ Institute of Life and Environmental Sciences, Iceland, , Iceland
375A
Factors influencing colonization of spinach and corn salad plants by the foodborne
pathogens Listeria monocytogenes and Salmonella enterica
1
2
2
Andreas Hofmann* , Michael Schmid , Anton Hartmann
1
2
Technical University Munich, Germany, Helmholtz Zentrum München, Germany
376A
Can beneficial bacteria in natural prey items be transferred to lobster larvae? An onship feeding experiment using aquaculture-reared larvae
Lone Høj*, David G Bourne, Evan F Goulden, Rochelle Soo, Emmanuelle Botte, Michael R
Hall
Australian Institute of Marine Science, Australia
377A
Occurrence of multidrug-resistant Serratia spp. in the Lake Kasumigaura drainage
basin, Japan
1
2
3
3
Tatsuya Imai* , M. Habibur Rahman , Hisao Kuroda , Hiroyuki Ohta
1
2
3
Ibaraki University College of Agriculture, Japan, Ibaraki University, Bangladesh, Ibaraki
University, Japan
377B
Norlichexanthone modulate S. aureus virulence gene expression via agr and sae
1
1
1
1
2
Hanne Ingmer , Anita Nielsen* , Dan Ifrah , Cathrine Friberg , Thomas O. Larsen , Hanne
1
1
1
Frøkiær , Nina G. Hede , Dorte Frees
1
2
University of Copenhagen, Denmark. Technical University, Denmark, Denmark
378A
The virulence factors in environmental Escherichia coli
1
2
3
Vladimir Kmet* , Stefan Faix , Marta Kmetova
1
2
Institute of Animal Physiology Slovak Academy of Sciences, Slovakia, Institute of Animal
3
Physiology, Slovak Acad. Sci., Slovakia, University of P. J. Safarik, Faculty of Medicine,
Department of Medical and Clinical Microbiology, Slovakia
379A
Investigating the microbiome of the bovine uterus in relation to endometritis, a costly
disease for dairy farmers
1
2
1
Lif Rødtness Vesterby Knudsen* , Eva Láadal Rasmussen , Kirstine Klitgaard Schou , Hanne
2
1
2
1
Gervi Pedersen , Øystein Angen , Jørgen Steen Agerholm , Tim Kåre Jensen
1
2
Technical University of Denmark, Denmark, University of Copenhagen, Denmark
144
PS22 – Microbial Disease Ecology
Thursday 23 August
380A
Human papillomavirus, cytomegalovirus and chlamydia trachomatis infections in
cervical cancer patients from tiruchirapalli, tamilnadu
Vinodhini Krishnakumar*, Santhanam Shanmughapriya, Kalimuthusamy Natarajaseenivasan
Bharathidasan University, India
381A
A metaproteomic analysis of a human indwelling urinary catheter biofilm dominated by
Pseudomonas aeruginosa
1
1
2
3
Christian Lassek* , Melanie Burghartz , Diego Chaves-Moreno Bernd Hessling , Andreas
3
1
3
2
3
Otto , Martina Jahn , Dörte Becher , Dietmar Pieper , Katharina Riedel
1
2
Technische Universität Braunschweig/ Institute of Microbiology, Germany, Braunschweig/
3
HZI/ Microbial interactions and processes, Germany, Greifswald/Institut of Microbiology,
Germany
382A
Comprehensive serotyping and epidemiology of human respiratory adenovirus isolated
in Gyeonggi province, South Korea
Hyunkyung Lee*, Myungjin Lee, Sukyoung Mun, Woonho Kim, Hangil Cho, Mihye Yoon,
Jongbok Lee
Gyeonggi-do Institute of Health and Environment, South Korea
383A
Comparative ocular microbial communities in humans with and without blepharitis
Se Hee Lee*, Ji Young Jung, Yoonsoo Hahn, Che Ok Jeon
Chung-Ang University, South Korea
383B
Effects of putatively prebiotic carbohydrates on pathogenic infections
1
2
Tine Rask Licht* , Hanne Frøkiær
1
2
Technical University of Denmark, Denmark, Copenhagen University, Denmark
384A
Influence of abiotic and biotic soil characteristics on Listeria monocytogenes survival
in the environment
Aude Locatelli*
Institut National de Recherche Agronomique, France
385A
Identifying genomic and metabolic features that can underlie early successional and
opportunistic lifestyles of human gut symbionts
1
2
2
3
4
Catherine Lozupone* , Karoline Faust , Jeroen Raes , Jeremiah Faith , Daniel Frank , Jesse
5
3
1
Zaneveld , Jeffrey Gordon , Rob Knight
1
2
3
University of Colorado, Boulder, USA, Vrije Universiteit Brussel, Belgium, Washington
4
University School of Medicine, USA, University of Colorado, School of Medicine, USA,
5
Oregon State University, USA
386A
Is Faecalibacterium prausnitzii a good indicator of healthy intestinal mucosaassociated microbiota?
1
1
1
2
Mireia López-Siles* , Margarita Martinez-Medina , Teresa Mas de Xaxars , Xavier Aldeguer ,
3
1
Míriam Sabat-Mir , L. Jesús García-Gil
1
2
3
Universitat de Girona, Spain, Hospital Universitari Dr. Josep Trueta, Spain, Parc Hospitalari
Martí i Julià, Spain
387A
Fungi and bacteria in nasal lavage from greenhouse workers as affected by
environmental exposure
1
2
3
1
Anne Mette Madsen* , Trine Thilsing , Jepser Bælum , Margit W. Frederiksen
1
2
National Research Centre for the Working Environment, Denmark, University of Southern
3
Denmark, Denmark, Odense University Hospital, Denmark
145
PS22 – Microbial Disease Ecology
Thursday 23 August
388A
Pilot study of bacterial communities associated with acute otitis media with perforation
in Indigenous Australian children
1
1
1
1
2
1
Robyn Marsh* , Mirjam Kaestli , Michael Binks , Linda Ward , Peter Morris , Amanda Leach ,
1
Heidi Smith-Vaughan
1
2
Menzies School of Health Research, Charles Darwin University, Australia, Menzies School
of Health Research, Charles Darwin University, Northern Territory Clinical School, Flinders
University, Australia
389A
Evolutionary linkage between aquatic predation-resistant bacteria and mammalian
pathogenic bacteria
1
2
3
2
Peter Mathisen* , Johanna Thelaus , Kerstin Kouppa , Anna-Lena Forslund , Emelie Näslund
3
3
4
2
1
Salomonsson , Laila Noppa , Anders Sjöstedt , Mats Forsman , Agneta Andersson
1
2
Umeå University / Department of Ecology and Environmental Science, Sweden, Swedish
3
Defence Research Agency / Department of CBRN Defence and Security, Sweden, Swedish
4
Defence Research Agency / Department of CBRN Defence and Security, Umeå University /
Department of Clinical Microbiology, Sweden
389B
Environmental monitoring of pathogens during bioremediation using massive parallel
16S rRNA gene sequencing
1
1
1
2
2
Satoko Matsukura* , Naohiro Noda , Yuji Sekiguchi , Masako Ito , Yoh Takahata , Keiko
3
3
3
3
4
Tsuchikane , Akira Hosoyama , Shoko Ohji , Atsushi Yamazoe , Hideaki Nojiri , Masao
5
Fukuda
1
2
National Institute of Advanced Industrial Science and Technology (AIST), Japan, Taisei
3
4
Corporation, Japan, National Institute of Technology and Evaluation (NITE), Japan, The
5
University of Tokyo, Japan, Nagaoka University of Technology, Japan
390A
Structural Stability of a Salivary Bacterial Population against Supragingival Microbiota
Shift Following Periodontal Therapy
1
1
1
1
2
Kazuki Matsuo* , Toru Takeshita , Wataru Yamanaka , Yukie Shibata , Nobuoki Eshima ,
1
1
Takeshi Yokoyama , Yoshihisa Yamashita
1
2
Kyushu University Faculty of Dental Science, Japan, Oita University Faculty of
Medicine, Japan
391A
Evaluation of a vegetative treatment system to reduce fecal microorganisms and
antibiotic resistant bacteria in beef cattle feedlot runoff
1
1
2
Daniel Miller* , Lisa Durso , Christopher Henry
1
2
USDA-ARS, United States, University of Arkansas, United States
392A
Diatom-indicated characteristics of aquatic plant biofilms associated with
Mycobacterium ulcerans
1
2
3
1
4
Stephanie Miller* , Heather Williamson , Eric Benbow , Jan Stevenson , Mollie McIntosh ,
1
2
1
Ryan Kimbirauskas , Pamela Small , Richard Merritt
1
2
3
Michigan State University, United States, University of Tennessee, United States, University
4
of Dayton, United States, Xavier University, United States
393A
Environmental reservoirs of the footrot pathogen Dichelobacter nodosus and
transmission dynamics of the disease
Mohd Muzafar*, Leo Calvo Bado, Laura E Green, Edward M Smith, Elizabeth M.H Wellington
The University of Warwick, United Kingdom
394A
Tick microbiomes revealed by Batch Learning Self-Organizing Maps (BLSOMs)
1
2
3
4
5
Ryo Nakao* , Takashi Abe , Ard Nijhof , Seigo Yamamoto , Frans Jongejan , Toshimichi
6
1
Ikemura , Chihiro Sugimoto
1
2
Research Center for Zoonosis Control, Hokkaido University, Japan, Niigata University,
3
4
Japan, Freie Universität Berlin, Germany, Miyazaki Prefectural Institute for Public Health and
5
6
Environment, Japan, Utrecht University, Netherlands, Nagahama Institute of Bio-Science
and Technology, Japan
146
PS22 – Microbial Disease Ecology
Thursday 23 August
195B
In situ multilocus variable number of tandem repeats based, direct typing methods of
Vibrio splendidus in oyster (Crassostrea gigas) haemolymph
1
2
3
3
Hanen Nasfi , Marie Agnes Travers , Delphine Destoumieux Garzon , Kevin Esteve , Louis
3
2
4
5
Sorieul , Delphine Tourbiez , Jean Christophe Avarre , Frederique Cerquieira , Radhouane
6
2
3
Gdoura , Tristan Renault , Tatiana Vallaeys*
1
2
Université de Montpellier/ Faculté des sciences de Sfax, Tunisia, IFREMER, France,
3
4
5
6
Université de Montpellier, France, IRD, France, Univerité de Montpellier, France, Faculté
des Sciences de Sfax, Tunisia
395A
A bistable switch and anatomical site control Vibrio cholerae virulence gene expression
in the intestine
1
2
1
3
Alex Toftgaard Nielsen* , Nadia A. Dolganov , Thomas Rasmussen , Glen Otto , Michael C.
2
3
3
2
Miller , Stephen A. Felt , Stéphanie Torreilles , Gary K. Schoolnik
1
2
Technical University of Denmark, Denmark, Department of Microbiology and Immunology,
3
Stanford University School of Medicine, USA, Department of Comparative Medicine, Stanford
University School of Medicine, USA
395B
Bacteroides vulgatus strain PC510 attenuates expression of the NF-kB signaling
pathway in HT-29 cells
1
2
1
1
Paraic O Cuiv* , Tomas de Wouters , Stanislas Mondot , Eline S. Klaassens , Hervé M.
2
1
Blottière , Mark Morrison
1
2
CSIRO Livestock Industries, Australia, INRA, France
396A
Bacterial and chemical contributions to aquatic environments: study of a medical
center – WWTP – river continuum and a pasture land – creek - river continuum
1
2
3
1
Kenny Oberle* , Marion-Justine Capdeville , Roland Leclercq , Thierry Berthe , Hélène
2
2
4
4
1
Budzinski , Patrick Pardon , Olivier Clermont , Erick Denamur , Fabienne Petit
1
2
University of Rouen - UMR 6143 M2C, France, University of Bordeaux 1 - UMR 5805 EPOC,
3
4
France, University of Caen - EA2128, France, University of Paris 7 - INSERM U722, France
397A
Effects of disease on the composition of sponge-associated bacterial communities
1
1
2
3
Julie Olson* , Matthew Jenny , Deborah Gochfeld , Robert Thacker
1
2
3
University of Alabama, United States, University of Mississippi, United States, University of
Alabama at Birmingham, United States
398A
Host-microbes interplay involved in the resolution of intestinal inflammation
Toshifumi Osaka*, Junki Hayasaki, Kosuke Miki, Satoshi Tsuneda
Waseda University, Japan
399A
A Host-Specific Microbiota is Required for Gut Immune Maturation
1
2
2
2
3
Sünje Johanna Pamp* , Hachung Chung , Neeraj Surana , Dennis Kasper , David A. Relman
1
2
Stanford University School of Medicine / Dept. of Microbiology & Immunology, USA, Harvard
3
Medical School, USA, Stanford University School of Medicine, USA
400A
Global patterns of the standing and active human gut microbiome in health and
inflammatory bowel diseases
1
2
1
3
1
Philipp Rausch* , Ateequr Rehman , Jun Wang , Stefan Schreiber , John F. Baines , Stephan
4
Ott
1
Max-Planck-Institute for Evolutionary Biology and Christian-Albrechts-University of Kiel,
2
Germany, Institute for Experimental Medicine, Christian-Albrechts-University of Kiel,
3
Germany, Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel;
Department of General Internal Medicine, Christian-Albrechts-University of Kiel, University
4
Hospital Schleswig-Holstein, Germany, Department of General Internal Medicine, ChristianAlbrechts-University of Kiel, University Hospital Schleswig-Holstein, Germany
401A
Investigating the impact of biodiversity on clinically-relevant bacterial communities: is
more truly merrier?
Damian Rivett*, Kenneth Bruce, Andrew Lilley
King's College London, United Kingdom
147
PS22 – Microbial Disease Ecology
Thursday 23 August
401B
Effect of black tea and fractions on human colonic microbiota measured by in vitro
models
1
1
2
1
3
Laure Roger* , Max Bingham , Deepak Mhasavade , Sara Mela , Glenn Gibson , Elaine
1
Vaughan
1
2
3
Unilever, Netherlands, Unilever, India, University of Reading, United Kingdom
402A
Does microbial community structure mediate pathogen colonization in nurses' hands?
1
1
2
1
1
Mariana Rosenthal* , Arianna Miles , Guilherme Ramos , Allison Aiello , Betsy Foxman
1
2
University of Michigan School of Public Health, United States, Faculdade Evangélica de
Medicina do Paraná, Brazil
403A
Microbial drivers in the development of black band disease in coral
1
2
3
4
5
4
Yui Sato* , Martin Glas , Andrew Muirhead , Edmund Ling , Bette Willis , David Edwards ,
3
David Bourne
1
ARC Centre of Excellence for Coral Reef Studies & School of Marine and Tropical Biology,
2
James Cook University, and AIMS@JCU, Australia, Max Planck Institute for Marine
3
4
Microbiology, Germany, Australian Institute of Marine Science, Australia, Australian Centre
for Plant Functional Genomics, School of Agriculture & Food Sciences, The University of
5
Queensland, Australia, ARC Centre of Excellence for Coral Reef Studies and School of
Marine and Tropical Biology, James Cook University, Australia
404A
Biocontrol effect of bacterial antagonists towards Rhizoctonia solani on lettuce and
interaction with the indigenous rhizosphere communities affected by soil types?
1
2
1
2
1
Susanne Schreiter* , Rita Grosch , Ute Zimmerling , Petra Zocher , Kornelia Smalla
1
2
Julius Kühn-Institute, Germany, Leibniz Institute of Vegetable and Ornamental Crops
Großbeeren/Erfurt e.V. (IGZ), Germany
405A
HuMiX: a microfluidics-based in vitro co-culture device for investigating humanmicrobial molecular interactions
1
1
2
2
1
Pranjul Shah* , Mahesh Desai , Matthew Estes , Frederic Zenhausern , Paul Wilmes
1
2
University of Luxembourg, Luxembourg, Centre for Advanced NanoBioscience and
Medicine, University of Arizona, USA
406A
In vitro actinomycetes biofilm development and biofilm inhibition by polyene antibiotic,
nystatin on IUD copper surfaces
Santhanam Shanmughapriya, Kalimuthusamy Natarajaseenivasan*, Vasanthi Nachiappan
Bharathidasan University, India
405B
QTL analysis of the skin microbiota and gene-microbe interactions in susceptibility to
experimental epidermolysis bullosa acquisita (EBA)
1
2
3
4
2
2
Girish Srinivas* , Steffen Moeller , Sven Kuenzel , Jun Wang , Ralf Ludwig , Detlef Zillikens ,
2
4
Saleh Ibrahim , John Baines
1
Max Planck Institute for Evolutionary Biology and University of Luebeck, Germany,
2
3
University of Luebeck, Germany, Max-Planck-Institute for Evolutionary Biology, Germany,
4
Max-Planck-Institute for Evolutionary Biology and Christian-Albrechts-University of Kiel,
Germany
407A
Changes in oral microbiota profiles associated with caries : a pilot study
1
1
1
1
1
2
Usha Srinivasan , Ai Wen , Lixin Zhang , Carl F Marrs , Deborah Goldberg , John Thomas ,
3
2
3
3
1
Robert Weyant , Richard Crout , Daniel McNeil , Mary Marazita , Betsy Foxman*
1
2
3
University of Michigan, USA, West Virginia University, USA, University of Pittsburgh, USA
408A
Bacterial community succession on a hydroxyapatite disk in oral cavity in caries-active
and caries-free subjects
1
1
2
1
1
Toru Takeshita* , Masaki Yasui , Yoji Saeki , Yukie Shibata , Yoshihisa Yamashita
1
2
Kyushu University Faculty of Dental Science, Japan, Lotte Co., Ltd., Central Laboratory,
Japan
148
PS22 – Microbial Disease Ecology
Thursday 23 August
041A
Genome-wide mapping of transcription factor binding in Pseudomonas aeruginosa
Juliane Thoegersen*, Lars Jelsbak, Soeren Molin
Technical University of Denmark, Denmark
408B
Impact of rye and wheat used as mulch in a cover crop production system on the
Pseudomonas syringae diversity
Vicky Toussaint*, Marie Ciotola, Mélanie Cadieux
Agriculture and Agri-Food Canada, Canada
409A
Diversity of nontuberculous mycobacteria in unchlorinated drinking water
Paul van der Wielen*, Dick van der Kooij
KWR Watercycle Research Institute, Netherlands
410A
Rodent species as reservoirs of Borrelia human pathogens in Dutch natural areas
1
2
3
Leo van Overbeek* , Fedor Gasner , Willem Takken
1
2
WUR Plant Research International, Netherlands, RIVM Bilthoven, Netherlands,
3
Wageningen University, Laboratory of Entomology, Netherlands
411A
A gene-targeted approach to investigate the intestinal butyrate producing bacterial
community
1
1
1
2
3
3
Marius Vital* , C.R. Penton , V. Young , D. Antonopoulos , M. Sogin , H. Morrison , L.
4
5
1
1
1
Harrell , E.B. Chang , Q. Wang , J. Cole , J.M. Tiedje
1
2
3
Michigan State University, United States, Argonne National Laboratory, USA, Marine
4
Biological Laboratory, USA, University of Chicago Inflammatory Bowel Disease Center,
5
USA, University of Chicago Medical Center, USA
412A
Bacterial profiling of White Plague Disease in a comparative coral species framework
Christian Voolstra*, Cornelia Roder, Chatchanit Arif, Manuel Aranda, Camille Daniels
KAUST, Saudi Arabia
413A
Scenedesmus-Microcystis interaction may provide a novel approach to combat toxic
cyanobacterial blooms
1
2
2
3
3
4
Gad Weiss* , Moshe Harel , Einat Daniel , Jenny Gun , Ovadia Lev , Mario Lebendiker ,
5
5
6
2
Tamar Zohary , Assaf Sukenik , Sergei Braun , Aaron Kaplan
1
2
the Hebrew University of Jerusalem, Israel, The Hebrew University of Jerusalem,
3
Department of Plant and Environmental Sciences, Israel, The Hebrew University of
4
Jerusalem, The Casali Institute of Applied Chemistry, Israel, The Hebrew University of
5
Jerusalem, The Wolfson Centre for Applied Structural Biology, Israel, Israel Oceanographic
6
and Limnological Research, The Yigal Allon Kinneret Limnological Laboratory, Israel, The
Hebrew University of Jerusalem, Department of Biological Chemistry, Israel
414A
Genus- and strain-level culture-independent characterization of acute uncomplicated
urinary tract infections with comparison to clinical isolate data
1
1
2
2
1
Dana Willner* , Serene Low , Narelle George , Graeme Nimmo , Mark Schembri , Philip
1
Hugenholtz
1
2
University of Queensland, Australia, Royal Brisbane Hospital, Australia
414B
Antibiotic resistance in freshwater: should increasing agricultural antibiotic use
concern us?
Cynthia Winkworth*
University of Otago, New Zealand
415A
Improved pathogen resistance can lead to non-targeted effects on endophytes in forest
trees
1
2
1
Johanna Witzell* , Juan A. Martín , Kathrin Blumenstein
1
2
Swedish University of Agricultural Sciences, Sweden, Technical University of Madrid, Spain
149
PS22 – Microbial Disease Ecology
Thursday 23 August
416A
Phenotypic heterogeneity of Pseudomonas aeruginosa populations in cystic fibrosis
patients
1
2
2
2
Matthew Workentine* , Christopher Sibley , Jens Norgaard-Gron , Harvey Rabin , Michael
1
Surette
1
2
McMaster University, Canada, University of Calgary, Canada
417A
Detection system of Rotavirus in water samples
Francisco Javier Zavala-Diaz de la Serna, Rocio Infante-Ramirez*, Jose Alfredo Soto-Alonso,
Gilberto Erosa-de la Vega
Universidad Autonoma de Chihuahua/Facultad de Ciencias Quimicas, Mexico
PS23 – Microbial Element Cycling: from genes to turnover
436A
The use and limitations of reaction-transport models in quantifying, predicting and
hindcasting biogeochemical dynamics in marine sediments
1
2
1
3
Sandra Arndt* , Laura Wehramnn , Jemma Wadham , Pierre Regnier
1
2
3
University of Bristol, United Kingdom, University of California, United States, Universite
Libre de Brussels, Belgium
437A
Identification of the active fungal and bacterial decomposers in forest soils using the
combination of next generation sequencing, stable isotope probing and enzyme
analysis
Petr Baldrian*
Institute of Microbiology ASCR, Czech Republic
438A
Linking the abundance of nirK, nirS and nosZ functional genes and nitrate removal
using alternative carbon sources in laboratory denitrification bioreactors
1
2
2
1
3
Maria Barrett* , Owen Fenton , T.G Ibrahim , Vincent O’Flaherty , Mark G. Healy
1
Microbial Ecology Laboratory, Department of Microbiology, School of Natural Science,
2
National University of Ireland, Ireland, Teagasc, Johnstown Castle, Environmental Research
3
Centre, Ireland, Civil Engineering, National University of Ireland, Ireland
083B
Bacterial activities driving arsenic speciation and solubility in marine sediments
1
2
1
1
Fabienne Battaglia-Brunet , Fabienne Séby , Catherine Crouzet , Catherine Joulian*
1
2
French geological survey (BRGM), France, Ultra Traces Analyse Aquitaine (UT2A), France
439A
Nitrite oxidation in the upper water column and oxygen minimum zone of the eastern
tropical North Pacific Ocean
1
2
2
J. Michael Beman* , Joy Shih , Brian Popp
1
2
University of California, Merced, United States, University of Hawaii, United States
440A
The relative proportion of plant C allocated to mycorrhiza and bacteria regulate soil C
sequestration
1
2
2
Per Bengtson* , Jason Barker , Sue J Grayston
1
2
Lund University, Microbial Ecology , Sweden, University of British Columbia, Faculty of
Forestry, Department of Forest Sciences, Canada
440B
Interactions between recalcitrant and labile organic carbon in streams - Are priming
effects important in stream biofilm carbon cycling?
Mia M. Bengtsson*, Karoline Wagner, Erik Herberg, Nancy Burns, Wolfgang Wanek, Tom
Battin
University of Vienna, Austria
150
PS23 – Microbial Element Cycling
Thursday 23 August
441A
Isolation of heterotrophic nitrogen fixing bacteria from an oxygen minimum zone in the
Baltic Sea
1
2
3
1
Mikkel Bentzon-Tilia* , Hanna Farnelid , Klaus Jürgens , Lasse Riemann
1
2
Section for Marine Biology, University of Copenhagen, Denmark, Department of Natural
3
Sciences, Linnaeus University, Sweden, Leibniz Institute for Baltic Sea Research (IOW),
Germany
442A
Archaeal nitrification in sulfide influenced hypoxic waters of the Baltic Sea
1
2
3
4
Carlo Berg* , Verona Vandieken , Bo Thamdrup , Klaus Jürgens
1
2
Leibniz Institute for Baltic Sea Research , Germany, Institute for Chemistry and Biology of
3
the Marine Environment (ICBM), Germany, Nordic Center for Earth Evolution (NordCEE),
4
University of Southern Denmark (SDU), Denmark, Leibniz Institute for Baltic Sea Research
Warnemünde (IOW), Germany
443A
Effect of high pressure CO2 on microbial communities and bacterial activities related to
carbon capture and storage
1
2
2
2
3
Sylvain Bordenave* , Françis Bernard , Paul Davis , Peter Clark , Gerrit Voordouw
1
2
University of Calgary, Canada, Alberta Sulphur Research Ltd., University of Calgary
3
Research Centre, Petroleum Microbiology Research Group, Department of Biological
Sciences and University of Calgary
443B
Abundance of norB and nosZ genes determined in conventional and no-tillage systems
in the cerrado (savannah) of southwest of Brazil
1
1
1
1
Clovis Daniel Borges* , Lina Chuan Wong , Marília Hauck Reichert , Caio Augusto Yoshiura ,
1
2
1
Dennis Goss Souza , Fábio Martins Mercante , Siu Mui Tsai
1
2
Centro de Energia Nuclear na Agricultura-USP, Brazil, Centro de Pesquisa Agropecuária
Oeste-Embrapa, Brazil
444A
Physiological shifts in the temperature response of denitrifying and anammox bacterial
communities in coastal sediments
1
2
3
Lindsay Brin* , Anne E. Giblin , Jeremy J. Rich
1
2
Brown University, USA, The Ecosystems Center, Marine Biological Laboratory, USA
3
Department of Ecology and Evolutionary Biology, Brown University, USA
445A
Nitrite oxidation under low oxygen conditions
1
2
3
4
Laura Bristow* , Bo Thamdrup , Tage Dalsgaard , Mark Trimmer
1
2
Nordic Center for Earth Evolution / Institute of Biology, Denmark, University of Southern
3
Denmark, Nordic Center for Earth Evolution, Denmark, Aarhus University, Department of
4
Bioscience - Marine Ecology, Denmark, Queen Mary, University of London, School of
Biological and Chemical Sciences, United Kingdom
446A
Bacterial communities potentially involved in arsenic cycle in groundwaters from
Lombardia (Italy)
1
1
1
2
1
Lucia Cavalca* , Patrizia Zaccheo , Anna Corsini , Ben Abbas , Vincenza Andreoni , Gerard
3
Muyzer
1
2
3
University of Milano, Italy, Delft University of Technology, Netherlands, University of
Amsterdam, Netherlands
446B
Does land use influence nitrogen cycling communities in soil?
Ian Clark*, Penny Hirsch
Rothamsted Research, United Kingdom
009A
Interactions of arsenic species with bacterial species in natural waters
Domenico Davolos*, Biancamaria Pietrangeli
INAIL, Department of Productive Plants and Interaction with the Environment (DIPIA), Italy
151
PS23 – Microbial Element Cycling
Thursday 23 August
447A
Investigating benthic nitrogen fixation at diverse deep-sea sites reveals diazotrophy in
the presence of high levels of ammonium
1
1
2
2
1
Anne Dekas* , Grayson Chadwick , David Fike , Dwight McCay , Nathan Dalleska ,
1
1
Stephanie Connon , Victoria Orphan
1
2
California Institute of Technology, USA, Washington University in St. Louis, USA
448A
Denitrifying bacteria produce much N2O at low pH, and we are beginning to understand
why
1
2
3
Asa Frostegard* , Binbin Liu , Lars R Bakken
1
2
Norwegian University of Life Sciences, Norway, Norwegian University of Life Sciences/Dep
3
of Chemistry, Biotechnology and Food Science, Norway, Norwegian University of Life
Sciences/Dep of Plant and Environmental Sciences, Norway
449A
Nitrite oxidation in the oxygen minimum zones of eastern tropical south Atlantic and
Pacific
1
1
1
1
2
Jessika Füssel* , Tim Kalvelage , Phyllis Lam , Gaute Lavik , Marlene M Jensen , Moritz
1
1
Holtappels , Marcel M M Kuypers
1
2
Max-Planck-Institute for Marine Microbiology, Germany, Nordic Center of Earth Evolution
and Institute of Biology, Denmark
450A
Role of sulfate-reducing bacteria in the reduction of iron in marine intertidal flat
sediment
1
2
1
Jeanine Geelhoed* , Halina Tegetmeyer , Marc Strous
1
2
Max Planck Institute for Marine Microbiology, Germany, Center for Biotechnology, Bielefeld
University, Germany
451A
Characterization and quantification of gene transcripts for arsenic respiration and
resistance during in situ uranium bioremediation
1
1
2
3
Ludovic Giloteaux* , Dawn E. Holmes , Kenneth H. Williams , Kelly C. Wrighton , Michael J.
4
2
1
1
Wilkins , Alison P. Montgomery , Jessica A. Smith , Courtney A. Thompson , Thomas J.
1
1
Roper , Derek R. Lovley
1
2
University of Massachusetts, Amherst, USA, Lawrence Berkeley National Laboratory,
3
4
USA, University of California Berkeley, USA, Pacific Northwest National Laboratory, USA
452A
Dissolved organic matter remineralization in the Benguela upwelling system
Philipp Hach*, Gaute Lavik, Thorsten Dittmar, Marcel Kuypers
Max Planck Institute for Marine Microbiology, Germany
452B
Assessment of PCR Primer Specificity in Detecting Anaerobic Ammonium Oxidizing
(Anammox) Bacteria and Their Diversity in Different Environmental Samples
1
2
3
3
3
Ping Han* , Uli Klümper , Alex Wong , Meng Li , Ji-Dong Gu
1
2
The University of Hong Kong, Hong Kong, Department of Chemistry, University of Duisburg3
Essen, Germany, School of Biological Sciences, The University of Hong Kong, China
453A
Dynamics of anoxic nitrogen cycling pathways and anammox-specific biomarkers in an
experimental marine sediment system
1
2
3
1
Amber Hardison , Ellen Hopmans , Anne Giblin , Jeremy Rich*
1
2
3
Brown University, USA, Netherlands Institute for Sea Research, Netherlands, Marine
Biological Laboratory, United States
454A
Microbial extracellular enzyme activity promotes slower cycling of soil carbon in
perennial agroecosystems
Sarah Hargreaves*, Kirsten Hofmockel
Iowa State University, United States
152
PS23 – Microbial Element Cycling
Thursday 23 August
455A
Substrate preferences of peatland sulphate reducers - elusive microorganisms
mitigating peatland methane emission
1
2
3
3
Bela Hausmann* , Klaus-Holger Knorr , Alexander Loy , Michael Pester
1
2
University of Vienna, Austria, Limnological Research Station, Department of Hydrology,
3
University of Bayreuth, Germany, Department of Microbial Ecology, Faculty of Life Sciences,
University of Vienna, Austria
456A
Differential responses of soil microbial communities to elevated carbon dioxide among
different ecosystems
1
1
2
3
4
1
1
Zhili He* , Ye Deng , Jinbo Xiong , Hao Yu , Meiying Xu , Liyou Wu , Kai Xue , Joy Van
1
5
5
6
7
8
Nostrand , Sarah Hobbie , Peter Reich , Christopher Schadt , Angela Kent , Elise Pendall ,
9
1
Matthew Wallenstein , Jizhong Zhou
1
2
3
University of Oklahoma, USA, Institute of Soil Science/CAS, China, Harbin Institute of
4
5
Technology, China, Guangdong Institute of Microbiology, China, University of Minnesota,
6
7
USA, Oak Ridge National Laboratory, USA, University of Illinois at Urbana-Champaign,
8
9
USA, University of Wyoming, USA, Colorado State University, USA
457A
Sulfur cycle in sewer networks and its consequences on cementitious materials
1
2
1
3
Jean Herisson* , Eric D. van Hullebusch , Marielle Guéguen , Marina Moletta , Pascal
4
1
Taquet , Thierry Chaussadent
1
2
Ifsttar, France, Université Paris-Est, Laboratoire Géomatériaux et Environnement, France,
3
4
INRA, France, Kerneos, France
458A
The microbial seed bank: the effects of desiccation and heat stress on methane
oxidizing bacteria
1
2
Adrian Ho* , Peter Frenzel
1
2
Laboratory of Microbial Ecology and Technology (LabMET), Belgium, Max-Planck-Institute
for Terrestrial Microbiology, Germany
458B
Genes associated with phosphorus solubilisation by plant growth-promoting
rhizobacteria
1
2
3
1
1
Pei-Chun (Lisa) Hsu* , Leo Condron , Tim Clough , Carolyn Mander , Steve Wakelin ,
1
1
Maureen O’Callaghan , Mark Hurst
1
2
3
AgResearch, New Zealand, Bio-Protection Research Centre, New Zealand, Lincoln
University, New Zealand
459A
Humic acids as accelerators of microbial Fe(II) oxidation
1
1
2
2
1
Anke Hädrich* , Ulrike Litzba , Jordon Beckler , Martial Taillefert , Kirsten Küsel
1
2
Friedrich Schiller University Jena / Institute of Ecology, Germany, Georgia Institute of
Technology / School of Earth and Atmospheric Sciences, USA
460A
Methanogenic oil degradation in the Dagang oil field
1
2
3
1
2
Núria Jiménez* , Minmin Cai , Friederike Gründger , Brandon E L Morris , Jun Yao , Hans H
1
3
Richnow , Martin Krüger
1
2
Helmholtz Centre for Environmental Research, Germany, University of Science and
3
Technology Beijing, China, Federal Institute for Geosciences and Natural Resources - BGR
Geozentrum Hannover Germany
461A
Insights into the unexplored diversity of the nitrous oxide reducing microbial
community
1
1
2
2
1
Christopher Jones* , Daniel Graf , David Bru , Laurent Philippot , Sara Hallin
1
2
Swedish University of Agricultural Sciences, Sweden, INRA, UMR 1347 Agroecologie,
France
462A
Effect of long term nitrogen amendment on denitrifier community structure and activity
along an established gradient of carbon availability
1
2
1
1
1
Christopher Jones* , Allana Welsh , Ella Wessen , Karin Enwall , Sara Hallin
1
2
Swedish University of Agricultural Sciences, Sweden, University of Illinois, USA
153
PS23 – Microbial Element Cycling
Thursday 23 August
463A
Denitrification in riparian wetlands of the Seine River (France)
1
2
1
1
Anniet Laverman* , Christelle Anquetil , Roose-Amsaleg Celine , Josette Garnier , Sylvie
2
Derenne
1
2
UMR 7619 Sisyphe, Universite Pierre et Marie Curie/CNRS, France, UMR 7618 Bioemco,
University Pierre et Marie Curie/CNRS, France
464A
Responses of soil nitrite-oxidizers to interacting global change components
1
2
3
3
4
Xavier Le Roux* , Audrey Niboyet , Laure Barthes , Paul Leadley , Chris Field , Thomas
5
5
6
5
Pommier , Maria Tourna , A Terada , Franck Poly
1
2
3
University Lyon1 / Microbial Ecology Centre, France, INRA, France, Univ Paris 11, France,
4
5
6
Carnegie Institute, USA, Univ Lyon1, France, Technical University of Denmark, Denmark
464B
Microbial metabolic characteristics throughout the South Atlantic Ocean
Itziar Lekunberri*, Eva Sintes, Daniele De Corte, Gerhard J. Herndl
University of Vienna, Austria
465A
Unexpected diversity of nitrite oxidoreductase genes (nxrB) in marine waters:
indications for novel nitrite oxidizing microorganisms?
1
2
1
Sandra Lopez* , Sebastian Luecker , Andreas Schramm
1
2
Aarhus University, Department of Bioscience, Microbiology, Denmark, University of Vienna,
Department of Microbial Ecology, Austria
466A
Anaerobic bacterial arsenic reduction in a rare, hypersaline estuary ecosystem: the
Laguna Madre (Texas, USA)
Kristine Lowe*, Janet Ruiz
University of Texas - Pan American, United States
467A
Diversity of manganese-oxidizing bacteria isolated from Taklimakan Desert suggests
diverse mechanisms for the interaction between bacteria and manganese
1
2
1
2
2
2
Xuesong Luo* , Yaqiong Wang , Xian-Chun Zeng , Jun Wang , Shaohua Wang , Yangqi Yu ,
2
1
2
Jun Li , Yanxin Wang , Chengxiang Fang
1
2
China University of Geosciences (Wuhan), China, Wuhan University, China
468A
Hitherto the nitrate transformations in Brazilian mangroves sediments
1
2
3
Danice Mazzer Luvizotto* , Beate Kraft , Aline Aparecida Pizzirani-Kleiner , Halina Halina
4
2
5
Tegetmeyer , Marc Strous , Fernando Dini Andreote
1
2
University of Sao Paulo, Brazil, Microbial Fitness Group, Max Planck Institute for Marine
3
Microbiology, Germany, Department of Genetics, Laboratory “Prof João Lúcio de Azevedo”,
4
“Luiz de Queiroz” College of Agriculture, University of São Paulo, Brazil, Center for
5
Biotechnology, University of Bielefeld, Germany Department of Soil Science, “Luiz de
Queiroz” College of Agriculture, University of São Paulo, Brazil
469A
Towards predictive understanding of nitrogen cycling in soils
1
2
1
2
Frank Löffler* , Robert Sanford , Sukhwan Yoon , Allana Welsh , Luis-Miguel Rodríguez
3
1
4
3
1
Rojas , Kirsti Ritalahti , Joanne Chee-Sanford , Konstantinos Konstantinidis , Frank Loeffler
1
2
3
University of Tennessee, United States, University of Illinois, United States, Georgia
4
Institute of Technology, United States, USDA-ARS, United States
470A
NirK-possessing denitrifying bacteria, not fungi, produce N2O indairy manure compost
1
2
1
1
1
Koki Maeda* , Sakae Toyoda , Takashi Osada , Dai Hanajima , Riki Morioka , Naohiro
2
Yoshida
1
2
National Agriculture and Food Research Organization, Japan, Tokyo Institute of
Technology, Japan
154
PS23 – Microbial Element Cycling
Thursday 23 August
470B
Quantifying methane turnover in the deep sea: the Carlos Ribeiro Mud Volcano (Gulf of
Cadiz) as a case study
1
2
2
3
4
Loïs Maignien* , R. John Parkes , Barry Cragg , Helge Niemann , Katrin Knittel , Stephanie
5
5
Coulon , Nico Boon
1
2
Bay Paul Center, Marine Biological Laboratory, USA, Laboratory of Geomicrobiology, Cardiff
3
University, United Kingdom, Institute for Environmental Geosciences, University of Basel,
4
5
Switzerland, Max Planck Institute for Marine Microbiology, Germany, Lab for Microbial
Ecology and Technology (LabMET), Ghent University, Belgium
471A
Denitrification in Bacillus vireti as a last resort to detoxify NO from DNRA
1
2
2
3
1
Daniel Mania* , Ines Verbaendert , Kim Heylen , Lars Bakken , Åsa Frostegård
1
Dept Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences,
2
3
Norway, Ghent University - Dept Biochemistry and Microbiology, Belgium, Dept Plant and
Environmental Sciences, Norwegian University of Life Sciences, Norway
472A
Depicting biomass-degrading enzymes in mangrove sediments by metagenomics
1
2
1
Joelma Marcon* , Fábio L. Soares Jr. , Mylenne Calciolari Pinheiro da Silva , Danielle David
3
1
1
1
Klein , Giulia Mazzero Inocêncio , João Lúcio Azevedo , Aline Aparecida Pizzirani-Kleiner ,
4
3
1
Valéria Maia de Oliveira , André Oliveira de Souza Lima , Fernando Dini Andreote
1
2
University of Sao Paulo - ESALQ/USP, Brazil, University of São Paulo - CENA/USP, Brazil,
3
4
University of Itajaí Valley - UNIVALI, Brazil, University of Campinas - UNICAMP, Brazil
473A
Impacts of climate change on N-cycling microorganisms in soil
1
2
2
2
3
Sven Marhan* , Daniel Keil , Kathy Regan , Julia Niehörster , Pascal A. Niklaus , Claudia
4
5
2
2
Kammann , Laurent Philippot , Christian Poll , Ellen Kandeler
1
2
University of Hohenheim, Germany, Institute of Soil Science and Land Evaluation, Soil
3
Biology, Universität Hohenheim, Germany Institute of Environmental Sciences, Universität
4
Zürich, Switzerland Department of Plant Ecology, Justus-Liebig University Giessen Germany,
5
INRA-University of Burgundy, Laboratory of Soil Microbiology and Geochemistry, France
474A
Heterotrophic growth of a marine bacterium from the SUP05/Arctic96BD-19 clade of
gamma proteobacteria on organic carbon and thiosulfate
Katharine Marshall*, Robert Morris
University of Washington, United States
474B
Metagenomics-based mining of the microbial halogen cycle
1
2
2
1
1
Kyle McPherson* , Zalan Szabo , Colin Ingham , Detmer Sipkema , Hauke Smidt
1
2
Wageningen University, Netherlands, MicroDish, Netherlands
475A
Microbial methanization in organic-rich shales
Margaux Meslé*, Charlotte Périot, Gilles Dromart, Philippe Oger
Laboratoire de Géologie de Lyon, CNRS UMR 5276, ENS de Lyon, France
476A
Land use changes in tropical peatlands affect microbial and metabolic processes
1
2
2
2
3
Shailendra Mishra* , Sheela Reuben , Lee Wan Aik , Aljosja Hooijer , Yung Pui Yui , Sanjay
1
Swarup
1
Department of Biological Sciences, National University of Singapore (NUS); NUS
Environmental Research Institute, Singapore; Singapore Delft Water Alliance, NUS,
2
Singapore, Singapore-Delft Water Alliance, National University of Singapore, Singapore,
3
Department of Biological Sciences, National University of Singapore (NUS); NUS
Environmental Research Institute, Singapore
477A
Seasonal changes in the community structure of ammonia-oxidizing prokaryotes in
oligotrophic groundwater from limestone aquifers
1
1
2
3
1
Sebastian Opitz* , Kirsten Küsel , Kai Uwe Totsche , Oliver Spott , Martina Herrmann
1
2
Friedrich Schiller University Jena / Institute of Ecology, Germany, Friedrich Schiller
3
University Jena/ Institute of Geosciences, Germany, Helmoltz Zentrum für Umweltforschung UFZ / Department Bodenphysik, Germany
155
PS23 – Microbial Element Cycling
Thursday 23 August
477B
Ecophysiology of a large planktonic marine Alteromonas that consumes an
unexpectedly high fraction of dissolved organic carbon
Byron Pedler*, Lihini Aluwihare, Farooq Azam
Scripps Institution of Oceanography, University of California San Diego, USA
478A
Abundance of functional groups of microorganisms as predictors for potential
biogeochemical process rates
1
2
3
2
2
Dorthe G. Petersen* , Steven J. Blazewicz , Mark Waldrop , Don J. Herman , Mary Firestone
1
2
Aarhus University/Center for Geomicrobiology, Department of Bioscience, Denmark, UC
3
Berkeley/ESPM, United States, USGS, United States
479A
Impact of silver nanoparticles on nitrification in estuarine sediments
1
2
2
2
3
1
Jessica Poole* , Bjorn Stolpe , Paula Cole , Jamie Lead , Melanie Sapp , Ian Colbeck ,
1
Corinne Whitby
1
2
University of Essex, United Kingdom, University of Birmingham, United
3
Kingdom, FERA, United Kingdom
480A
Diagenesis of biogenic iron minerals: tracking the interaction of Fe and C over deep
time
1
2
2
2
3
Nicole Posth* , Elizabeth D. Swanner , Inga Koehler , Andreas Kappler , Donald E. Canfield
1
2
Nordic Center for Earth Evolution (NordCEE) - Institute for Biology, Denmark, Center for
3
Applied Geoscience, University of Tuebingen, Germany, Nordic Center for Earth Evolution
(NordCEE), Instit. for Biology, University of Southern Denmark, Denmark
150B
Responses of redox potential, nitrogen loss and soil microbial communities to frequent
changes in aerobic and anaerobic conditions on a flooded soil
1
2
1
2
Laurent Quillet* , Chokri Mchergui , Ludovic Besaury , Marthe Akpa-Vinceslas , Estelle
2
2
Langlois , Fabrice Bureau
1
2
UMR CNRS 6143, France, Laboratoire ECODIV, EA1293, Université de Rouen, IRESE A,
place Emile Blondel, F-76821 Mont Saint Aignan Cedex, France
481A
A quantitative model of bacterial particle and polymer degradation in aquatic systems
Kristin T. Ravndal*, Roald Kommedal
University of Stavanger, Norway
482A
Biomethylation of mercury by earthworms and its influence on ingested bacteria
1
1
2
3
1
Stefan Rieder* , Ivano Brunner , Otto Daniel , Bian Liu , Beat Frey
1
2
3
Swiss Federal Institute WSL, Switzerland, Agroscope Waedenswil, Switzerland, University
of Geneva, Switzerland
483A
Denitrification in natural freshwater systems – analysis of local and continental
determinants
1
1
2
1
3
1
Antti Rissanen* , Jatta Karhunen , Anne Ojala , Anna Taskinen , Lauri Arvola , Marja Tiirola
1
2
3
University of Jyväskylä, Finland, University of Helsinki, Finland, Lammi Biological
Station/University of Helsinki, Finland
483B
Methane microbial ecology in hydroelectric reservoirs: methanotrophic activity in water
samples and of a bacterial strain from Tucuruí reservoir, Pará, Brazil
1
1
Cristina Rossi Nakayama* , Juliana Aparecida Bomjardim Soares , Débora do Carmo
2
2
2
3
Linhares , Ana Carolina Vieira Araújo , Vivian Helena Pellizari , Artur Luiz da Costa Silva
1
2
3
Federal University of Sao Paulo, Brazil, University of Sao Paulo, Brazil, Federal University
of Para, Brazil
484A
Impact of nitrification on the Nitrogen Cycle in the Elbe estuary
Tina Sanders*, Kirstin Daehnke
Helmholtz Zentrum Geesthacht, Germany
156
PS23 – Microbial Element Cycling
Thursday 23 August
485A
The contributions of fungi to the biogeochemical cycling of Mn in metal-rich
environments
1
1
2
3
Cara Santelli* , Dominique Chaput , William Burgos , Colleen Hansel
1
2
Smithsonian Institution, United States, The Pennsylvania State University, United States,
3
Harvard School of Engineering and Applied Sciences, United States
486A
Isolation and characterization of novel thermophilic nitrifying Bacillus sp. from
compost
1
2
Chikako Shimaya* , Tomoyoshi Hashimoto
1
2
National Agricultural Research Center for Kyusyu Okinawa Region, Japan, National
Agricultural Research Center, Japan
487A
Heterotrophic nitrate assimilating bacteria throughout the Atlantic ocean: new
perspectives on the global nitrogen cycle
Eva Sintes*, Paul Steiner, Daniele De Corte, Gerhard J. Herndl
University of Vienna, Austria
488A
Nitrite Respiration in a Groundwater Contaminant Plume, Cape Cod, Massachusetts,
USA
1
2
2
1
3
Richard Smith* , Bongkeun Song , James Taylor , J. K. Bohlke , Craig Tobias
1
2
U.S. Geological Survey, United States, University of North Carolina at Wilmington, United
3
States, University of Connecticut, United States
489A
Coral mucus enhances prokaryotic productivity in surrounding seawater
Akito Taniguchi*, Takashi Yoshida, Mitsuru Eguchi
Kinki University, Japan
489B
High affinity sulfate reduction kinetics in marine sediment
Irene Harder Tarpgaard*, Hans Røy, Kasper Kjeldsen, Kai Finster, Bo Barker Jørgensen
Center for Geomicrobiology, Aarhus University, Denmark
490A
Discriminating between the contributions of ammonia oxidizing archaea and bacteria to
soil nitrification
Anne Taylor, Neeraja Vajrala, Daniel Arp, David Myrold*, Peter Bottomley
Oregon State University, USA
491A
The effect of pH on soil microbial community structure and function: results from a
manipulated pH experiment
1
1
2
1
Bruce Thomson* , Nick Ostle , Graeme Nicol , Rob Griffiths
1
2
Centre for Ecology & Hydrology, United Kingdom, University of Aberdeen, United Kingdom
492A
The fungal factor in variation of wood decay rates: the LOGLIFE experiment at
microscale
1
2
1
Annemieke van der Wal* , Hans Cornelissen , Wietse de Boer
1
2
NIOO-KNAW, Netherlands, Vrije Universiteit Amsterdam, Netherlands
493A
Identification of acetate-oxidizing bacteria in Aarhus Bay surface sediment by RNAstable isotope probing in anoxic slurries and intact sediment cores
1
2
Verona Vandieken* , Bo Thamdrup
1
University of Oldenburg, Institute for Chemistry and Biology of the Marine Environment,
2
Germany, University of Southern Denmark, Nordic Center for Earth Evolution, Denmark
494A
Extracellular enzyme activity assays as a tool to investigate priming in freshwater
biofilms
Karoline Wagner*, Erik Herberg, Mia Bengtsson, Nancy Burns, Anna Sieczko, Tom Battin
University of Vienna/ Department of Limnology, Austria
157
PS23 – Microbial Element Cycling
Thursday 23 August
494B
Sulfur isotope fractionation in various habitats around mud volcanoes and brine pools
in the Gulf of Mexico
1
2
1
Hannah Sophia Weber* , Samantha B Joye , Kirsten S Habicht
1
2
University of Southern Denmark, Nordic Center for Earth Evolution, Denmark, Department of
Marine Sciences, University of Georgia, Athens, United States
495A
Microbial ecology of Anammox organisms: do organics drive Anammox?
1
2
1
Simon Williams* , Mark Trimmer , Kevin Purdy
1
2
University of Warwick, United Kingdom, Queen Mary, University of London, United Kingdom
496A
New insights into the Movile Cave food web: bacteria using methylated amines as a
carbon, energy and nitrogen source
1
2
1
Daniela Wischer* , Yin Chen , J. Colin Murrell
1
2
University of East Anglia, United Kingdom, University of Warwick, United Kingdom
497A
Quantitative detection of nitric oxide reductase (norB) gene and nitrous oxide
reductase (nosZ) gene in soils of different land-use types
1
1
2
1
Lina Chuan Wong , Clovis Daniel Borges* , Fábio Martins Mercante , Siu Mui Tsai
1
2
Centro de Energia Nuclear na Agricultura-USP, Brazil, Centro de Pesquisa Agropecuária
Oeste-Embrapa, Brazil
498A
Vanadium addition to contaminated sediments results in vanadium reduction,
decreases diversity and selects for specific taxa
1
1
1
2
1
Alexis Yelton* , Kelly Wrighton , Kim Handley , Ken Williams , Jillian Banfield
1
2
University of California, Berkeley, USA, Lawrence Berkeley National Laboratory, United
States
499A
Isolation of bacteria capable of degrading pharmaceuticals and personal care products
to low ng/L concentrations
Nicolette Zhou*, April Lutovsky, Greta Andaker, Heidi Gough, John Ferguson
University of Washington, United States
499B
Phylogenetic diversity of cellular stoichiometry among marine bacteria
Amy Zimmerman*, Steven Allison, Adam Martiny
University of California Irvine, United States
PS24 – Microbial Life in Extreme Environments
076A
Diversity and function of fungal communities in biological soil crusts in Oman
Raeid Abed*, Abdullah Al-Sadi, Muneera Al Shehi, Sheikha Al-Hinai, Michael Robinson
Sultan Qaboos University, Oman
077A
Effects of simazine and 2, 4-dichlorophenoxyacetic acid upon genetics and metabolic
diversity in aerobic heterotrophic bacteria present in a pristine cold aquatic
oligotrophic environments
1
2
2
2
Paulina Aguayo* , Felipe Contreras , Paulina González , Evelyn Hernández , Carlos
2
3
2
González , Ricardo Barra , Miguel Martínez
1
2
Universidad de Concepción, Microbiología, Chile, Departamento de Microbiología,
3
Universidad de Concepción, Chile, Centro EULA-Chile, Universidad de Concepción, Chile
078A
Spatial and salinity effect in halophilic bacterial diversity of Salar de Huasco (Chilean
Altiplano)
1
1
2
2
Pablo Aguilar , Cristina Dorador , Joice Leon , Francisco Remonsellez*
1
2
Universidad de Antofagasta, Chile, Universidad Catolica del Norte, Chile
158
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
079A
Microbial dynamics during the annual freeze in Bratina Island ponds
1
1
1
2
3
Stephen Archer , Craig Cary , Ian McDonald* , Karl Safi , Ian Hawes
1
2
University of Waikato, New Zealand, National Institute of Atmospheric Research, New
3
Zealand, University of Canterbury, New Zealand
080A
Bacterial and archaeal community structure along a geochemical gradient in
hydrothermally influenced sediments of Guaymas Basin, Gulf of California
1
1
1
2
1
Philip A. Arevalo* , Sean P. Sylva , Caroline R. Toney , Nadine Le Bris , Jeffrey S. Seewald ,
1
Stefan M. Sievert
1
2
Woods Hole Oceanographic Institution, USA, Benthic Ecogeochemistry Laboratory,
Universite Pierre et Marie Curie, France
081A
Spatiotemporal dynamics of bacterial community in the very As-rich creek waters of
Carnoulès mine, France
1
1
1
1
2
Volant Aurélie* , Bruneel Odile , Desoeuvre Angélique , Casiot Corinne , Bru Nöelle , Delpoux
1
1
3
3
1
Sophie , Héry Marina , Javerliat Fabien , Fahy Anne , Elbaz-Poulichet Françoise , Duran
3
4
3
Robert , Bertin Phillipe , Laugat Béatrice
1
2
Laboratoire HydroSciences Montpellier UMR 5569, France, UMR CNRS 5142, France,
3
4
EEM, UMR 5254, France, GMGM, UMR 7156, France
082A
Molecular diversity and cold-adaptation in permafrost bacteria from Taylor Valley,
Antarctica
1
2
3
Corien Bakermans* , Mark Skidmore , Suzanne Douglas
1
2
Pennsylvania State University, Altoona College, United States, Montana State University,
3
United States, NASA Jet Propulsion Laboratory, United States
078B
Enrichment and identification of psychrotolerant iron- and sulfur-oxidizing
Acidithiobacillus strain from Chilean Altiplano
1
1
2
Sergio Barahona , Cristina Dorador , Francisco Remonsellez*
1
2
Universidad de Antofagasta, Chile, Universidad Católica del Norte, Chile
083A
Direct and crossed effects of temperature, pressure and salinity on metabolic activity of
anaerobic strains
1
1
1
1
Vanessa Barsotti , Sébastien Dupraz , Catherine Joulian* , Fabienne Battaglia-Brunet , Claire
2
1
Sergeant , Francis Garrido
1
2
BRGM, France, CENBG, France
084A
Does the capacity to induce lightning in clouds increase the adaptive potential of
Pseudomonas syringae?
1
1
1
2
Laurine Blanchard* , Sandrine Demanèche , François Buret , Cindy E. Morris , Timothy M.
1
1
Vogel , Pascal Simonet
1
2
Ecole Centrale de Lyon - Université de Lyon, France, INRA, UR407 Pathologie Végétale,
France
085A
Elevational patterns of bacterial diversity on glaciers
1
2
3
1
4
Dylan Bodington* , Takahiro Segawa , Nozomu Takeuchi , Yuichi Hongoh , Shiro Kohshima
1
2
3
Tokyo Institute of Technology, Japan, National Institute of Polar Research, Japan, Chiba
4
University, Japan, Kyoto University, Japan
086A
Linking Mn(II)-oxidizing bacteria to natural attenuation at a former uranium mining site
1
1
2
3
3
Tsing Bohu* , Denise Akob , Andrea Beyer , Franziska Schäffner , Matthias Haendel , Carol
4
5
6
6
1
Johnson , Dirk Merten , Georg Buechel , Kai-Uwe Totsche , Kirsten Kuesel
1
2
Friedrich Schiller university Jena/Institute of Ecology, Germany, Friedrich Schiller university
3
Jena/ Institute of Microbiology, Germany, Friedrich Schiller university Jena/Institute of Earth
4
5
Sciences, Germany, Virginia Tech/Department of Geosciences, USA, Schiller university
6
Jena/Institute of Earth Sciences, Germany, Schiller university Jena/Institute of Geosciences,
Germany
159
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
087A
Identification and cultivation of thermophilic Planctomycetes
1
1
1
Elizaveta Bonch-Osmolovskaya* , Galina Slobodkina , Margarita Miroshnichenko , Olga
1
2
1
1
Kovaleva , Alexander Merkel , Anna Perevalova , Yana Nepomnyashchaya , Alexander
1
1
3
3
4
Slobodkin , Nikolay Chernyh , Andrey Mardanov , Vitaly Kadnikov , Esta van Heerden , Olga
5
1
Karnachuk , Alexander Lebedinsky
1
2
Winogradsky Institute of Microbiology RAS, Russian Federation, Winogradsky Institute of
3
4
Microbiology, Russian Federation, Centre , Russian Federation, University of the Free
5
State, South Africa, Tomsk State University, Russian Federation
088A
Restriction Endonuclease TypeII from Thermotolerant Soil Bacteria Isolated from Hot
Springs in Northern Thailand
1
1
1
Sakunnee Bovonsombut* , Yingmanee Tragoolpau , Panmuk Vacharapiyasophon , Sittisin
2
1
3
3
Bovonsombut , Woottichai Nachaiwieng , Fumio Kato , Khozo Kanda
1
2
3
Chiang Mai University, Thailand, Maejo University, Thailand, Saga University, Japan
089A
Diversity of microbial communities in coal mine drainage remediation systems treating
elevated manganese
1
2
3
1
Dominique Chaput* , William Burgos , Colleen Hansel , Cara Santelli
1
2
3
Smithsonian Institution, USA, Pennsylvania State University, USA, Woods Hole
Oceanographic Institution, USA
090A
Extremely hypersaline isolates from microbial mats exhibit quorum sensing quenching
and anti-microbial properties
Sergey Dobretsov*, Raeid Abed, Marwan Al-Fori
Sultan Qaboos University, Oman
091A
Studying structure of methanotrophic communities from thermal springs of Uzon
volcano caldera, Kamchatka
Ekaterina Dvorianchikova*, Anna Kizilova, Irina Kravchenco, Valery Galchenco
Winogradsky Institute of Microbiology, Russian Academy of Sciences, Russian Federation
092A
Metagenomic reconstruction of microbial communities from a CO2-driven geyser
extends the environmental distribution of the Zetaproteobacteria
Joanne Emerson*, Brian Thomas, Jillian Banfield
University of California, Berkeley, USA
093A
Microbial communities associated with alkaline hydrothermal systems of Prony Bay,
New Caledonia
1
1
1
1
2
Gael Erauso , Anne Postec* , Marianne Quémeneur , Fatma Benaïssa , Jérôme Hamelin ,
3
3
4
5
5
Bénédicte Menez , Emmanuelle Gérard , Martine Gérard , Bernard Pelletier , Claude Payri ,
1
1
Marie-Laure Fardeau , Bernard Ollivier
1
Aix-Marseille University, Mediterranean Institute of Oceanography, 163, Av de Luminy,
2
3
France, INRA, UR050, Laboratoire de Biotechnologie de l'Environnement, France, Institut de
4
Physique du Globe Paris (IPGP), France, Institut de Minéralogie et Physique des Milieux
5
Condensés (IMPMC), France, Institut de Recherche pour le Développement (IRD), UR
227, French Polynesia
094A
Geochemistry and microbiology in an acidic and high altitude (4.000m) salt flat in
northern Chile
1
2
3
1
Lorena Escudero , Guillermo Chong , Juan José Pueyo , Cecilia Demergasso*
1
Centro de Investigación Científica y Tecnológica para la Minería (CICITEM) and Centro de
2
Biotecnología-Universidad Católica del Norte, Chile, Departamento de Ciencias Geológicas3
Universidad Católica del Norte, Chile, Departamento de Geoquímica-Universidad de
Barcelona, Spain
160
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
095A
From microbial communities to nanocrystals: a multi-scale approach towards
understanding interactions among bacteria, iron minerals, and metal contaminants
1
1
2
2
1
Maria Fabisch* , Gina Freyer , Carol Johnson , Michael Hochella, Jr. , Kirsten Küsel
1
Friedrich Schiller University Jena, Institute of Ecology, Aquatic Geomicrobiology Group,
2
Germany, Virginia Tech, Department of Geosciences, Center for NanoBioEarth, USA
095B
Bacterial and archaeal diversity in permafrost soil from Kunlun Mountains Pass, Tibet
Plateau of China
1
1
1
1
1
1
1
Huyuan Feng* , Weigang Hu , Qi Zhang , Jing Mu , Gang Cheng , Tian Tian , Dingyao Li ,
2
2
1
Fujun Niu , Qingbai Wu , Lizhe An
1
2
School of Life Sciences, Lanzhou University, China, State Key Laboratory of Frozen Soil
Engineering, Chinese Academy of Sciences, China
096A
Survival of dry periods by iron depositing bacteria in biofilms attached to mars regolith
simulants
1
1
2
1
Nina Feyh* , Bertram Schmidt , Jean-Pierre de Vera , Ulrich Szewzyk
1
Technische Universität Berlin/Institute of Environmental Technology, Environmental
2
Microbiology, Germany, German Aerospace Center (DLR), Institute of Planetary Research,
Germany
097A
Diversity of Aerobic Endospore-forming Bacteria in Geothermal Sites in Greece
Sevasti Filippidou*, Nicole Jeanneret, Ludovic Roussel-Delif, Tina Wunderlin, Thomas Junier,
Pilar Junier
University of Neuchatel, Switzerland
098A
Bioprospecting for proteases from bacteria isolated from soil of St George Island,
Antarctic
Anderson Fragoso dos Santos*, Anderson Fragoso dos Santos, Daniela Costa Pinto, Hugo
Emiliano Jesus, Angelo Samir, André Santos, Raquel Peixoto, Alexandre Rosado, Marta
Branquinha
Federal University of Rio de Janeiro, Brazil
098B
Metabolic potential of halotolerant spore-forming gram-positive bacteria from Restinga,
Rio de Janeiro, Brazil
Anderson Fragoso dos Santos*, Roberta Valle, Vanessa Marques Alvarez, Lucy Seldin, André
Santos
Federal University of Rio de Janeiro, Brazil
099A
Induction of dormancy in ice wedge isolates and characterization of dormant cells
1
1
1
2
1
Kentaro Funo* , Indun Dewi Puspita , Moe Uehara , Wataru Kitagawa , Michiko Tanaka ,
2
Youichi Kamagata
1
2
Hokkaido university, Japan, Hokkaido university and National Insitute of Advanced Industrial
Science and Technology, Japan
100A
Microbial diversity and enzyme characteristics of the unique ikaite columns; a
permanently cold and alkaline environment in SW Greenland
1
1
1
2
Mikkel Andreas Glaring* , Jan Kjølhede Vester , Jeanette Eva Lylloff , Waleed Abu Al-Soud ,
2
1
Søren Johannes Sørensen , Peter Stougaard
1
2
University of Copenhagen, Dept. of Plant and Environmental Sciences, Denmark, University
of Copenhagen, Dept. of Biology, Denmark
101A
How do indigenious thermophilic microorganisms affect the permeability of potential
CO2 storage sites?
1
2
3
4
5
Claudia Gniese* , Carsten Freese , Nils Hoth , Andrea Kassahun , Martin Mühling , Michael
5
Schlömann
1
2
TU Bergakademie Freiberg / Institute of Biological Sciences, Germany, TU Bergakademie
3
Freiberg / Institut f. Bohrtechnik und Fluidbergbau, Germany, TU Bergakademie Freiberg /
4
Institut f. Bergbau und Spezialtiefbau, Germany, Dresdner Grundwasserforschungszentrum
5
e. V., Germany, TU Bergakademie Freiberg / Institut f. Biowissenschaften, Germany
161
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
102A
Microbial Activity and Diversity through a cold, hyper-arid desert permafrost core in
University Valley, Antarctica
1
2
2
3
4
Jacqueline Goordial* , Alfonso Davila , Margarita Marinova , Dale Andersen , Charles Greer ,
1
2
1
Wayne Pollard , Chris McKay , Lyle Whyte
1
2
3
McGill University, Canada, NASA Ames Research Center, USA, SETI Institute, USA,
4
Biotechnological Research Institute, National Research Council of Canada, Montreal, QC,
Canada
103A
Microbial Community Diversity and Their Roles on Nitrogen Cycling at Terrestrial
Hydrothermal Systems
1
2
Yasemin Gulecal* , D'Arcy Meyer-Dombard
1
2
Istanbul University, Turkey, University of Illinois at Chicago, United States
104A
Sulfur cycling at submarine freshwater springs in the Dead Sea
1
1
2
3
3
Stefan Haeusler* , Danny Ionescu , Yaniv Munwes , Christian Lott , Miriam Weber , Lubos
1
1
4
5
2
Polerecky , Christian Quast , Thorsten Dittmar , Aharon Oren , Jonathan B. Laronne , Dirk de
1
Beer
1
2
Max Planck Institute for Marine Microbiology, Germany, Ben Gurion University, Israel,
3
4
5
HYDRA Institute for Marine Sciences, Italy, Carl von Ossietzky University, Germany, The
Hebrew University of Jerusalem, Israel
105A
Meta-transcriptomic analysis of microbial community associated with a soda lake in
Khovsgol, Mongolia
1
2
3
4
Natsuko Hamamura* , He Huang , Shujiro Okuda , Narantuya Damdinsuren
1
2
Ehime University, Japan, Center for Marine Environmental Studies (CMES), Ehime
3
4
University, Japan, Department of Bioinformatics, Ritsumeikan University, Japan, School of
Biology and Biotechnology, National University of Mongolia, Mongolia
106A
Deep sea hydrothermal vent enrichment cultures: A way to find novel hydrogenases
Moritz Hansen*, Mirjam Perner
University of Hamburg, Germany
107A
Comparison of microbial assemblages in Arctic multi-year and first year sea ice
Ido Hatam*, Brian Lanoil, Christian Haas
University of Alberta, Canada
108A
Unrevealed culturable bacterial diversity in Lirima wetland, a high Andean sulfurous hot
spring
1
2
3
4
1
Martha Hengst* , Klaudia Hernandez , Veronica Molina , Giannina Maya , Cristina Dorador
1
2
3
Universidad de Antofagasta, Chile, CIEN Austral, Universidad Austral, Chile, Universidad
4
Andres Bello, Chile, Universidad de Concepcion, Chile
109A
The physiological characterisation of a novel Thermomicrobia isolate
1
2
3
3
3
Karen Houghton* , Xochitl Morgan , Kirill Lagutin , Mikhail Vyssotskii , Andrew MacKenzie ,
1
2
Hugh Morgan , Matthew Stott
1
2
3
University of Waikato, New Zealand, GNS Science, New Zealand, IRL, New Zealand
110A
Comparative Metagenomics Along a Thaw Gradient of Alaskan Permafrost
1
2
2
2
3
Jenni Hultman* , Maude M. David , Olivia U. Mason , Regina Lamendella , Manesh B. Shah ,
3
4
2
Nathan Verberkmoes , Mark P. Waldrop , Janet K. Jansson
1
2
3
University of Helsinki, Finland, Lawrence Berkeley National Laboratory, United States, Oak
4
Ridge National Laboratory, United States, United States Geological Survey, United States
111A
Culture-independent bacterial monitoring with adhesive sheet in the "Kibo", a part of
the International Space Station
Tomoaki Ichijo*, Hatsuki Hieda, Rie Ishihara, Nobuyasu Yamaguchi, Masao Nasu
Osaka University, Japan
162
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
112A
Genome analysis of Haloarchaea isolated from seawater
1
2
3
4
2
Kentaro Inoue* , Kenshiro Oshima , Mikihiko Kawai , Hideto Takami , Masahira Hattori ,
1
Kazuhiro Kogure
1
2
University of Tokyo, Atmosphere and Ocean Research Institute, Japan, University of Tokyo,
3
Center for Omics and Bioinformatics, Japan, JAMSTEC, Environmental Metagenome
4
Research Team, Japan, JAMSTEC, Microbial Genome Research Group, Japan
113A
Springs of life in a Dead Sea - rich microbial communities in and around a complex
system of underwater springs in the Dead Sea
1
2
1
3
1
Danny Ionescu* , Christian Siebert , Stefan Häusler , Thorsten Dittmar , Lubos Polerecky ,
4
5
5
6
1
Yaniv Munwez , Christian Lott , Miriam Weber , Mina Bižić-Ionescu , Christian Quast , Aharon
7
2
4
1
Oren , Stefan Geyer , Jonathan B Laronne , Dirk De Beer
1
2
Max Planck Institute for Marine Microbiology, Germany, Helmholtz-Centre for Environmental
3
Research – UFZ, Germany, Max Planck Institute for Marine Microbiology, Carl von Ossietzky
University, Institute for Chemistry and Biology of the Marine Environment (ICBM), Germany,
4
5
Ben Gurion University, Israel, Max Planck Institute for Marine Microbiology, HYDRA Institute
6
for Marine Sciences, Germany, Max Planck Institute for Marine Microbiology, Leibniz Institute
7
of Freshwater Ecology and Inland Fisheries Berlin (IGB), Germany, The Hebrew University of
Jerusalem, Israel
113B
Microbial life in a geothermal fluid
1
1
1
1
1
Marion Jaussi* , Nicole Jeanneret , Sevasti Filippidou , Thomas Junier , Tina Wunderlin ,
1
2
2
1
Ludovic Roussel-Delif , Andrea Vieth-Hillebrand , Simona Regenspurg , Pilar Junier
1
2
University of Neuchâtel, Institute of Biology, Switzerland, Helmholtz-Zentrum Potsdam,
Deutsches GeoForschungsZentrum GFZ, Germany
114A
Survival of microorganisms to the main stress factors encountered in clouds
1
2
2
2
2
Muriel Joly* , Pierre Amato , Martine Sancelme , Mickael Vaitilingom , Virginie Vinatier ,
3
2
Laurent Deguillaume , Anne-Marie Delort
1
Blaise Pacal University - Institut de Chimie de Clermont Ferrand - Laboratoire de
2
Météorologie Physique, France, Blaise Pacal University - Institut de Chimie de Clermont
3
Ferrand, France, Blaise Pacal University - Laboratoire de Météorologie Physique, France
115A
Extreme plasticity of biological stoichiometry
1
1
2
3
4
Carriayne Jones* , Sean Crowe , Julia Maresca , Edward DeLong , Bernhard Viehweger ,
4
5
6
1
Kai-Uwe Hinrichs , David Fowle , Sulung Nomosatryo , Donald Canfield
1
2
3
University of Southern Denmark, Denmark, University of Delaware, USA, Massachusetts
4
5
Institute of Technology, USA, University of Bremen, Germany, University of Kansas, USA,
6
Indonesian Institute for Sciences, Indonesia
116A
Diversity and distribution of cyanobacteria and microbialites in lakes of the McMurdo
Dry Valleys, Antarctica
1
2
3
3
1
4
Anne Jungblut* , Ian Hawes , Dawn Y Sumner , Tyler Mackey , Lu Zhang , Dale T. Andersen
1
2
The Natural History Museum, United Kingdom, University of Canterbury, United Kingdom,
3
4
University of California, USA, Carl Sagan Center for the Study of Life in the Universe, USA
117A
High-energy geochemistry drives microbial diversity and distribution in Yellowstone
Lake
1
2
1
3
3
Jinjun Kan* , Scott Clingenpeel , Charlie Dow , Richard Macur , William Inskeep , Dave
4
3
5
3
5
Lovalvo , John Varley , Yuri Gorby , Timothy McDermott , Kenneth Nealson
1
2
3
Stroud Water Research Center, USA, DOE Joint Genome Institute, USA, Montana State
4
5
University, USA, Eastern Oceanics, USA, Univeristy of Southern California, USA
118A
Isolation and physiological characterization of butanol- and isobutanol-tolerant bacteria
Manabu Kanno*, Taiki Katayama, Hideyuki Tamaki, Yasuo Mitani, Tomoyuki Hori, Takashi
Narihiro, Naoki Morita, Isao Yumoto, Nobutada Kimura, Satoshi Hanada, Yoichi Kamagata
National Institute of Advanced Industrial Science and Technology, Japan
163
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
119A
Evolution at fluctuating temperatures improves thermal tolerance, pre-adapts to novel
environments and alters virulence of opportunistic pathogen
1
1
1
1
2
Tarmo Ketola* , Lauri Mikonranta , Ji Zhang , Kati Saarinen , Anni-Maria Örmälä , Johanna
1
2
Mappes , Jouni Laakso
1
2
University of Jyväskylä, Finland, University of Helsinki, Finland
120A
Biodiversity of prokaryotic microflora associated with halophytes in Farasan islands
shallow salt sites
Mohammad Khiyami*
King Abdulaziz City for Science and technology, Saudi Arabia
121A
Bacterial community change during biofilm development in Arctic marine environment
1
1
2
1
3
Eun Hye Kim* , Kyeung Hee Cho , Tae-Kyung Kim , Yung Mi Lee , Jang-Cheon Cho , Hong
1
1
Kum Lee , Soon Gyu Hong
1
2
Korea Polar Research Institute, South Korea, Korea Bioinformation Center, South Korea,
3
Inha University, South Korea
122A
Evidence for methane oxidation over 74°C in hot springs of Kuril Islands
Anna Kizilova*, Irina Kravchenko, Nikolay Pimenov
Winogradsky Institute of Microbiology, Russia
123A
Microbe-mineral interaction in an extreme arid and high saline mine tailings
environment in northern Chile
1
1
1
1
Hananeh Korehi* , Marco Blöthe , Maria Alexandrovna Sitnikova , Dagmar Kock , Bernhard
2
1
Dold , Axel Schippers
1
2
Federal Institute for Geosciences and Natural Resources, Germany, FCFM-Universidad de
Chile, Departamento de Geología, Chile
124A
Thermophilic sulfate reducing bacteria from a Brazilian Petroleum Reservoir
1
2
3
4
2
Elisa Korenblum* , Camila França , Monica Penna , Jan Dirk van Elsas , Lucy Seldin
1
2
3
RUG, UFRJ, Netherlands, UFRJ, Brazil, CENPES 4
PETROBRAS, Brazil, RUG, Netherlands
125A
Microbial hydrocarbon degradation to methane in different deep geological systems
1
2
3
3
Martin Krüger* , Hans-Hermann Richnow , Heribert Cypionka , Sabrina Beckmann
1
2
3
BGR, Germany, UFZ, Germany, ICBM, Germany
125B
Osmoadaptation of halophilic methanogen
Mei-Chin Lai*, Shu-Jung Lai, Shu-Yao Wu, Chuan-Chuan Hung Hung
National Chung Hsing University/Department of Life Sciences, Taiwan
126A
Chemolithotrophic activity in a subzero hypersaline spring of the High Arctic
1
2
1
Guillaume Lamarche-Gagnon* , Charles Greer , Lyle Whyte
1
2
McGill University, Canada, Biotechnology Research Institute, Canada
127A
Does geochemistry drive community structure and function in high Arctic snow
ecosystems?
1
2
1
3
Catherine Larose* , Emmanuel Prestat , Sébastien Cecillon , Aurélien Dommergue , Timothy
1
M. Vogel
1
Environmental Microbial Genomics, Ecole Centrale de Lyon, Université de Lyon, France,
2
Earth Science Division, Ecology Department, Lawrence Berkeley National Laboratory, USA,
3
Université Joseph Fourier – Grenoble 1 / CNRS, LGGE, France
164
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
128A
16S rRNA and functional diversity: contrasting fingerprints in arsenic-rich sediments
from an acid mine drainage
1
1
2
3
4
Béatrice Lauga* , Anne Fahy , Philippe Bertin , Denis Le Paslier , Claudine Médigue , Jean
5
1
1
Weissenbach , Ludovic Giloteaux , Robert Duran
1
2
Université de Pau et des Pays de l'Adour, France, Génétique Moléculaire, Génomique et
3
Microbiologie, UMR CNRS 7156, France, Commissariat à l'Énergie Atomique et aux Énergies
4
Alternatives, Institut de Génomique, Genoscope, France, UEVE, Université d'Évry, CNRS5
UMR 8030, France, Commissariat à l'Énergie Atomique et aux Énergies Alternatives, UEVE,
Université d'Évry, CNRS-UMR 8030, France
129A
A metagenomic study and active 16S rRNA pyrosequencing analysis of a High Arctic
subzero hypersaline spring
1
1
2
1
Chih-Ying Lay* , Nadia Mykytczuk , Etienne Yergeau , Guillaume Lamarche-Gagnon ,
2
1
Charles Greer , Lyle Whyte
1
2
McGill University, Canada, Biotechnology Research Institute, National Research Council
Canada, Canada
130A
Microbial diversity and biogeochemical function of the phototrophic microbial mats in
epsomitic Hot Lake, WA
Steve Lindemann*, James Moran, Young-Mo Kim, Alice Dohnalkova, David Kennedy, Sergey
Stolyar, H. Steven Wiley, Allan Konopka, Jim Fredrickson
Pacific Northwest National Laboratory, USA
131A
Bacterial diversity in the foreland of the Tianshan No. 1 and Dongkemadi Glacier, China
Guangxiu Liu, Wei Zhang*, Xiukun Wu
Cold and Arid Regions Environmental and Engineering Research Institute, Chinese Academy
of Sciences, China
132A
Cold-active and alkali-stable proteases from bacteria isolated from the polyextreme
ikaite columns in Greenland
Jeanette Eva Lylloff*, Mikkel Glaring, Peter Stougaard
Copenhagen University, Denmark
133A
Unique genomic and physiological traits of an ultra low-diversity bacterial and fungal
high-elevation (> 6000 m) cold desert mineral soil community
Ryan Lynch*, Steve Schmidt
University of Colorado Boulder, United States
134A
The ecological dichotomy of ammonia oxidizing archaea and bacteria in the hyper-arid
soils of the Antarctic Dry Valleys
1
2
2
3
3
Catarina Magalhães* , Adriano Bordalo , Ana Machado , Béatrice Barbier , Charles Lee ,
3
Craig Cary
1
2
3
CIIMAR, Portugal, ICBAS, University of Porto, Portugal, International Centre for Terrestrial
Antarctic Research, University of Waikato, New Zealand
135A
Metagenomic analysis of microbial community inhabiting the deep subsurface thermal
waters in Western Siberia
Andrey Mardanov*, Vitaly Kadnikov, Nikolay Ravin
Centre Bioengineering RAS, Russian Federation
136A
Diversity of culturable anaerobic bacteria in rhizosphere soil from Antarctic vascular
plant of Admiralty Bay, maritime Antarctica
1
2
2
3
Rafael José Marques Peixoto* , Leandro A. Lobo , Karla Miranda , Geraldo Renato Paula ,
2
2
2
2
Naiara Rust , Alexandre Rosado , Raquel Peixoto , Regina Maria Domingues
1
Universidade Federal do Rio de Janeiro, Instituto de Microbiologia Paulo de Góes, Brazil,
2
3
UFRJ, Brazil, UFF, Brazil
165
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
137A
Identification of genes involved in zinc and cadmium adaptation in rhizobia isolated
from heavy metal mine soil
1
2
3
1
Geraldine Maynaud* , Antoine Le-Quere , Erika Yashiro , Jean-Claude Cleyet-Marel , Brigitte
1
Brunel
1
2
Laboratoire des Symbioses Tropicales et Méditerranéennes, France, IRD, LMI Rabat,
3
Morocco, Department of Plant Pathology, University of Wisconsin - Madison, WI, USA
138A
The proteomic response of extreme acidophile, Acidithiobacillus ferrooxidans, to
increased chloride concentrations
Timothy McCredden*, Robert Steuart, Christopher Bryan, Elizabeth Watkin
Curtin University, Australia
079B
Hot and Cold: Microbial ecology of geothermal soils of Antarctica
Ian McDonald*, Craig Herbold, Chelsea Vickers, Craig Cary
University of Waikato, New Zealand
139A
Population genetic structure of deep-sea chemolithoautotrophs inferred from
multilocus sequence analysis
1
1
1
2
2
Sayaka Mino* , Satoshi Nakagawa , Tomoo Sawabe , Junichi Miyazaki , Hiroko Makita ,
2
2
2
Takuro Nunoura , Masahiro Yamamoto , Ken Takai
1
2
Hokkaido University, Japan, JAMSTEC, Japan
140A
Hydrothermal fluid flow affects the dispersal of subsurface Zetaproteobacteria
Craig Moyer*, Sean McAllister
Western Washington University, United States
141A
Genomic and glycomic analysis of endosymbionts and their gastropod hosts in a deepsea hydrothermal field, Central Indian Ridge
1
2
1
1
2
Satoshi Nakagawa* , Shigeru Shimamura , Tamaki Watanabe , Tomoo Sawabe , Ken Takai ,
2
Yoshihiro Takaki
1
2
Hokkaido University, Japan, JAMSTEC, Japan
142A
Microbiology, geochemistry, and mineralogy of a household sand filter used to remove
arsenic from drinking water in Vietnam
1
1
2
2
2
Katja Nitzsche , Ankita Bhansali* , Vi Mai Lan , Pham Thi Kim Trang , Pham Hung Viet ,
3
1
1
Michael Berg , Andreas Kappler , Sebastian Behrens
1
2
3
University of Tuebingen, Germany, Hanoi University, Viet Nam, Eawag, Switzerland
143A
Isolation, identification and applications of halotolerant bacteria from São Paulo Zoo
Composting
1
1
1
Debora Noma Okamoto* , Lilian Caroline Gonçalves Oliveira , Patrícia Locosque Ramos ,
1
1
1
Márcia Yuri Kondo , Alyne Marem Silva Barbosa , Thiago Carlos Bertolin , Diego Magno
1
1
2
1
Assis , Rafael Costa Santos Rocha , João Batista Cruz , Suzan Pantaroto Vasconcellos , Luiz
1
Juliano
1
2
Universidade Federal de São Paulo, Brazil, Fundação Parque Zoologico de São Paulo,
Brazil
144A
Identification of extracellular proteases in halophiles isolated from La Pampa solar
ponds
1
2
3
Lilian Caroline Gonçalves Oliveira* , Roberto Alejandro Paggi , Debora Noma Okamoto ,
2
2
3
Debora Nercessian , Leonardo Di Meglio , Maria Aparecida Juliano , Rosana Esther De
2
3
Castro , Luiz Juliano
1
2
3
UNIFESP/Infar, Brazil, Universidade Nacional de Mar del Plata, Argentina, Universidade
Federal de São Paulo, Brazil
166
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
144B
Characterization of tolerance to Arsenic of Exiguobacterium sp. isolated from high
altitude Andean wetlands
1
1
1
2
1
Omar Ordoñez , Carolina Belfiore , Daniel Kurth , Nestor Cortez , Maria Eugenia Farias*
1
2
PROIMI-CONICET, Argentina, IBR-CONICET, Facultad de Ciencias Bioquimicas y
Farmaceuticas, Universidad Nacional de Rosario, Argentina
145A
Prospection of novel proteases from a metagenomic library from Bertioga city
mangrove sediments (São Paulo State - Brazil) using High Throughput Screening (HTS)
1
2
2
2
2
Júlia Ottoni* , Lilian Oliveira , Débora Okamoto , Luiz Neto , Suzan Vasconcellos , Anete
3
1
Souza , Valéria Oliveira
1
2
Campinas State University - UNICAMP / Division of Microbial Resources, Brazil, São Paulo
3
Federal University - Unifesp, Brazil, Campinas State University - UNICAMP / Center of
Molecular Biology and Genetic Engineering, Brazil
146A
Bacterial abundances and phytopigments on sediments from Southwest Atlantic
1
2
2
Rodolfo Paranhos* , Anderson Cabral , Fernando Pinto
1
2
Rio de Janeiro Federal University / Institute of Biology, Brazil, UFRJ / Institute of Biology,
Brazil
147A
Experimental and single cell approaches to understanding microbial life in subsurface
sediments underlying the extremely oligotrophic South Pacific Gyre
1
2
2
1
Anand Patel* , Tim G. Ferdelman , Andreas Krupke , Wiebke Ziebis
1
2
University of Southern California, United States, Max-Planck-Institute for Marine
Microbiology, Germany
148A
Nature of the microbial life in an Antarctic subglacial lake ecosystem
1
1
1
2
David Pearce* , Gavin Burns , Dominic Hodgson , Charles Cockell
1
2
British Antarctic Survey, United Kingdom, University of Edinburgh, United Kingdom
149A
Screening of biosurfactant producing bacteria from oil reservoir of Northern Petroleum
Development Center, Chiang Mai Province
1
2
1
Thanachai Phetcharat* , Pinan Dawkrajai , Sakunnee Bovonsombut
1
2
Chiang Mai University, Thailand, Northern Petroleum Development Center, Thailand
150A
Molecular and microbial analysis of diversity present in unpreserved wood from King
Henry VIII's Tudor warship the Mary Rose
Joanne Preston*, Joy Watts
University of Portsmouth, United Kingdom
151A
Study of interactions copper-microorganisms in impacted marine Chilean sediments
1
1
2
Laurent Quillet , Ludovic Besaury* , Gerard Muyzer
1
2
UMR CNRS 6143, France, Laboratory of Microbiology, University of Delft, Netherlands
151B
Abundance, activity and diversity of bacterial and archaeal communities in highly
copper-contaminated chilean marine sediment
1
2
3
Laurent Quillet* , Besaury Ludovic , Ghiglionne Jean-Francois
1
2
3
UMR CNRS 6143, France, UMR CNRS 6143 Université de Rouen, France, UMR CNRS
7621, Laboratoire d'Océanographie Microbienne LOMIC, France
152A
Resistance of biological sand crust organisms to excess light during desiccation
Hagai Raanan*, Yitzhak Ohad, Nir Keren, Aaron Kaplan
The Alexander Silberman Institute of Life Sciences The Hebrew University, Israel
153A
Carbon dioxide affects growth and thiosulphate reduction of thermophilic Petrotoga sp.
1
2
3
1
1
Jana Rakoczy* , Claudia Gniese , Hans-Hermann Richnow , Axel Schippers , Martin Krüger
1
2
Federal Institute for Geosciences and Natural Resources, Germany, TU Bergakademie
3
Freiberg, Germany, Helmholtz Centre for Environmental Research - UFZ, Germany
167
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
481B
The effect of hydrostatic pressure on biodegradation of a mixture of benzene, toluene,
ethylbenzene and o-xylene
Kristin T. Ravndal*, Andrea Bagi, Roald Kommedal
University of Stavanger, Norway
154A
Fungal diversity from deep marine subsurface sediments (IODP 317, Canterbury Basin,
New Zealand)
1
2
2
2
Vanessa Redou* , Danielle Arzur , Gaëtan Burgaud , Georges Barbier
1
Laboratoire Universitaire de Biodiversité et Ecologie Microbienne (EA3882), France,
2
Laboratoire Universitaire de Biodiversité et Ecologie Microbienne (EA3882), IFR148
ScInBioS, Université Européenne de Bretagne, Université de Brest, ESMISAB, Technopôle de
Brest Iroise, 29280 Plouzané, France
155A
The microbial ecology of cementitious radioactive waste
1
1
1
2
Athanasios Rizoulis* , Adam Williamson , Christopher Boothman , Antoni Milodowski ,
1
1
Katherine Morris , Jonathan Lloyd
1
2
University of Manchester, United Kingdom, British Geological Survey, United Kingdom
156A
Microbial diversity of lithifying communities in the Great Salt Lake, Utah
1
2
3
Giovanni Rompato* , Stephen Callister , Jacob Parnell
1
2
Utah State University, United States, Pacific Northwest National Laboratory, United
3
States, National Ecological Observatory Network, United States
157A
Liberation of microbial substrates from macromolecular organic matter by nonsupercritical CO2
Patrick Sauer*, Clemens Glombitza, Jens Kallmeyer
University of Potsdam, Institute of Earth and Environmental Science, Germany
158A
Bacterial communities established in bauxite residues with different restoration
histories
1
2
1
2
1
Achim Schmalenberger* , Orla O'Sullivan , Jacinta Gahan , Paul D. Cotter , Ronan Courtney
1
2
University of Limerick, Life Sciences, Ireland, Teagasc, Moorepark Food Research
Centre, Ireland
159A
Environmental controls on microbial diversity in geothermal springs
1
1
1
2
3
Christine Sharp* , Allyson Brady , Joongjae Kim , Stephen Grasby , Matthew Stott , Peter
1
Dunfield
1
2
3
University of Calgary, Canada, Geological Survey of Canada, Canada, GNS Science, New
Zealand
160A
Microbial synthesis and transformation of dissolved organic matter in glacial
environments
1
1
3
4
Heidi Smith* , Christine Foreman , Rachel Foster , Diane McKnight
1
2
Montana State Universtiy, United States, Max-Planck Institute for Marine Microbiology,
3
Germany, INSTAAR, University of Colorado, United States
161A
Carnobacterium iners sp. nov., a psychrophilic, lactic acid-producing bacterium from
the littoral zone of the Forlidas pond (Pensacola mountains), Antarctica
1
1
2
1
3
Isabel Snauwaert* , Bart Hoste , Katrien De Bruyne , Karolien Peeters , Luc De Vuyst , Anne
1
1
Willems , Peter Vandamme
1
2
3
Ghent University, Belgium, Applied Maths, Belgium, Vrije Universiteit Brussel, Belgium
162A
Microbial degradation of the pesticide 2,4-D on the Greenland Ice Sheet
1
1
2
1
Marek Stibal* , Jacob Bælum , William E Holben , Sebastian R Sørensen , Carsten S.
1
Jacobsen
1
2
Geological Survey of Denmark and Greenland, Denmark, University of Montana, United
States
168
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
163A
Physiological and genomic characterization of microorganisms in actively
serpentinizing The Cedars springs
1
2
2
2
1
Shino Suzuki-Ishii , J. Gijs Kuenen* , Kira Schipper , Suzanne van der Velde , Shunichi Ishii ,
1
1
Greg Wanger , Kenneth H. Nealson
1
2
J. Craig Venter Institute, USA, Delft University of Technology, Netherlands
164A
In situ expression of key genes for sulfide oxidation and CO2 fixation of uncultured
gigantic Aquificales bacterium dominating in hot spring microbial mats
Satoshi Tamazawa*, Hideyuki Tamaki, Kazuto Takasaki, Satoshi Hanada, Yoichi Kamagata
National Institute of Advanced Industrial Science and Technology (AIST), University of
Tsukuba, Japan
164B
Catabolic and stress response of Desulfitobacterium hafniense DCB-2 to increasing
concentrations of 3-chloro-4-hydroxyphenylacetic acid
Ye Tian*, Farai Maphosa, Maria Suarez Diez, Hauke Smidt
Wageningen University, Netherlands
165A
An "omics" approach to characterizing dissolved organic matter from microbially
derived sources in Antarctica
Michelle Tigges, Christine Foreman*, Brian Bothner, Heidi Smith
Montana State University, United States
166A
Changes in the microbial water column community in response to a volcanic eruption
at 9°50'N on the East Pacific Rise (EPR)
1
2
2
2
Alexander H. Treusch* , Kevin L. Vergin , Kyle R. Pomraning , Marie P. Johnson , James P.
3
2
Cowen , Stephen J. Giovannoni
1
University of Southern Denmark/Nordic Center for Earth Evolution and Institute of Biology,
2
3
Denmark, Oregon State University/Department of Microbiology, United States, University of
Hawaii at Manoa/ Department of Oceanography, United States
167A
A newly isolated green alga from desert crusts - an unusual combination of a unique
survival capability and record high growth and photosynthetic rates
Haim Treves*, Itzhak Ohad, Aaron Kaplan
Hebrew University of Jerusalem, Israel
167B
A molecular approach to extremophilic prokaryotic biodiversity in hot springs of a little
explored geothermal region in Argentina
1
2
3
1
María Sofía Urbieta* , Elena Gonzalez Toril , Alejandra Giaveno , Edgardo Donati
1
2
CINDEFI Universidad Nacional de La Plata, Argentina, Centro de Astrobiologia INTA CSIC,
3
Spain, Universidad Nacional del Comahue, Argentina
168A
Response of bacterial soil communities to a small diesel-spill at the Argentine station
Carlini on King George Island (Antarctica)
1
2
3
4
Susana Vazquez* , Jutta Jürgens , Patrick Monien , Roberto Pepino Minetti , Walter Mac
5
2
Cormack , Helmke Elisabeth
1
2
University of Buenos Aires-CONICET, Argentina, Alfred Wegener Institute, Germany,
3
4
University Oldenburg-ICBM, Germany, CIQA-UTN Regional Córdoba, Argentina,
5
Argentinean Antarctic Institute, Argentina
169A
Enzymes from extremophilic microorganisms; tools to reduce energy consumption in
industrial processes
Jan Vester*, Mikkel Glaring, Peter Stougaard
University of Copenhagen / Department of Plant and Environmental Sciences, Denmark
170A
Reconstruction of the microbial methane cycling in deep Arctic environments
1
2
1
Dirk Wagner* , Juliane Bischoff , Kai Mangelsdorf
1
2
Helmholtz Centre Potsdam, GFZ German Centre for Geosciences, Germany, Alfred
Wegener Institute for Polar and Marine Research, Germany
169
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
171A
New nitrifying microorganisms from hot springs of Yellowstone National Park
Katja Wendt*, Yvonne Bedarf, Eva Spieck
Universität Hamburg, Germany
172A
Microbial biodiversity of the Alpine vanishing cryosphere
Linda Wilhelm*, Katharina Besemer, Christina Fasching, Gabriel Singer, Tom J. Battin
University of Vienna, Department of Limnology, Austria
173A
Response of bacterial and archaeal ammonia oxidizers to abruptly increased moisture
in the soil of arid ecosystems: abundance of amoA genes and transcripts
Sher Yonatan, Ronen Zeev*, Nejidat Ali
Ben Gurion University of the Negev, Israel
174A
Characterization of H2-producing CO-oxidizing bacterium Carboxydothermus pertinax
from an acidic hot spring in Japan
Yasuko Yoneda*, Takashi Yoshida, Satoshi Kawaichi, Takashi Daifuku, Takayuki Kitamura,
Takahiro Inoue, Sanae Kano, Keiji Takabe, Yoshihiko Sako
Kyoto University, Japan
175A
Ammonium removal by sulfate- reducing and nitrate- dependent anammox
Ivar Zekker*, Ergo Rikmann, Toomas Tenno, Priit Vabamäe, Kristel Kroon, Alar Saluste,
Taavo Tenno
University of Tartu, Estonia
131B
Characteristics of microbial community structure during desertification reverse
procedure
Wei Zhang*, Gaosen Zhang, Guangxiu Liu
Cold and Arid Regions Environmental and Engineering Research Institute, Chinese Academy
of Sciences, China
176A
Ribosomal tag pyrosequencing reveals that sulfur metabolizing microbes drive the
shallow-sea hydrothermal systems off NE Taiwan's coast
1
1
2
1
Yao Zhang* , Zihao Zhao , Chen-Tung Arthur Chen , Nianzhi Jiao
1
2
Xiamen University, China, National Sun Yat-Sen University, Taiwan
177A
Could organic compounds in a storm cloud support the diverse bacterial community
revealed by hailstones?
1
1
2
1
3
Tina Šantl Temkiv* , Kai Finster , Thorsten Dittmar , Bjarne M. Hansen , Runar Thyrhaug ,
4
5
Niels W. Nielsen , Ulrich G. Karlson
1
2
Aarhus University, Department of Bioscience, Denmark, University of Oldenburg, Institute for
Chemistry and Biology of the Marine Environment, Max Planck Research Group for Marine
3
4
Geochemistry, Germany, University of Bergen, Department of Biology, Norway, Danish
5
Meteorological Institute, Denmark, Aarhus University, Department of Environmental Science,
Denmark
178A
Investigation of low bacterial density environments: Reducing background
contamination problems with sensitive DNA-targeting techniques
Tina Šantl Temkiv*, Kai Finster, Ulrich G. Karlson
Aarhus University, Denmark
179B
Atmospheric methane oxidation by airborne methanotrophic bacteria at cloud-like
conditions
1
1
1
2
1
Tina Šantl Temkiv* , Kai Finster , Bjarne M. Hansen , Lejla Pašić , Ulrich G. Karlson
1
2
Aarhus University, Denmark, University of Ljubljana, Slovenia
170
PS24 – Microbial Life in Extreme Environments
Thursday 23 August
180A
Elevated CO2 is changing soil microbial communities at natural CO2 springs (mofettes)
1
2
3
4
5
Nataša Šibanc , Thorunn Helgason , Alex J. Dumbrell , Ines Mandič Mulec , Polona Zalar ,
6
1
Hans-Josef Schroers , Irena Maček*
1
2
University of Ljubljana, Biotechnical Faculty, Department of Agronomy, Slovenia, University
3
of York, Department of Biology, United Kingdom, University of Essex, School of Biological
4
Sciences, United Kingdom, University of Ljubljana, Biotechnical Faculty, Department of Food
5
Science and Technology, Slovenia, University of Ljubljana, Biotechnical Faculty, Department
6
of Biology, Slovenia, Agricultural Institute of Slovenia, Slovenia
PS25 – Microbial Origin and Evolution
181A
Rewiring of global regulatory networks drives the adaptation of Pseudomonas
aeruginosa to the airways of Cystic Fibrosis Patients
Søren Damkiær*, Lars Jelsbak, Søren Molin
Technical University of Denmark (DTU) / Center for systems biology, Denmark
182A
The genome of the anaerobic gut fungal strain Orpinomyces sp. C1A, a remarkable
biomass degrader with a unique evolutionary history
Mostafa Elshahed*, Mb Couger, Noha Youssef, Audra Liggenstoffer, Chris Struchtemeyer,
Fares Najar, Rolf Prade
Oklahoma State University, United States
182B
Role of mismatch repair system deficiency in the evolution of Pseudomonas
aeruginosa in chronic airways infections
1
2
3
3
2
Sofía Feliziani* , Rodrigo Quiroga , Rasmus L. Marvig , Søren Molin , Andrea M Smania
1
2
Universidad Nacional de Córdoba, Argentina, Centro de Investigaciones en Química
Biológica de Córdoba (CIQUIBIC), CONICET, Departamento de Química Biológica, Facultad
de Ciencias Químicas, Universidad Nacional de Córdoba, X5000HUA Córdoba, Argentina,
3
Center of System Microbiology, Department of System Biology, DTU, DK-2800 Lyngby,
Denmark
183A
Real-time microbial adaptive radiation in soil
Pedro Gomez Lopez*, Angus Buckling
University of Exeter, United Kingdom
184A
Genomic analyses demonstrates cholera outbreaks are caused by heterogeneous V.
cholerae strains
1
2
2
1
1
1
Bradd Haley* , Nur A. Hasan , Seon Young Choi , Elisa Taviani , Arlene Chen , Anwar Huq ,
1
Rita R. Colwell
1
2
University of Maryland, College Park, USA, CosmosID, USA
185A
Critical role of rapid evolution in consumer resource dynamics
1
2
2
2
2
Teppo Hiltunen* , Stephen P. Ellner , Giles Hooker , Laura E. Jones , Nelson G. Hairston
1
2
University of Helsinki, Finland, Cornell University, United States
186A
The evolution of colistin resistance in pseudomonas aeruginosa
1
1
1
2
Nicholas Jochumsen* , Rasmus L. Marvig , Søren D. Pedersen , Rune L. Jensen , Morten O.
1
1
1
A. Sommer , Søren Molin , Anders Folkesson
1
3
Technical University of Denmark, Department of Systems Biology, Denmark, Novozymes
AS, Denmark
171
PS25 – Microbial Origin and Evolution
Thursday 23 August
187A
Complete genome sequence of organotrophic bacterium Melioribacter roseus
representing new phylum-level lineage affiliated with Chlorobi
1
1
2
Vitaly Kadnikov , Andrey Mardanov , Olga Podosokorskaya , Elizaveta Bonch2
1
Osmolovskaya , Nikolay Ravin*
1
2
Centre “Bioengineering” RAS, Russian Federation, Winogradsky Institute of Microbiology
RAS, Russian Federation
188A
The evolutionary history of protein fold families and proteomes confirms archaea is the
most ancient superkingdom
1
2
Kyung Mo Kim* , Gustavo Caetano-Anolles
1
2
Korea Research Institute of Bioscience and Biotechnology, South Korea, University of
Illinois, United States
189A
Diversification of the Bacillus subtilis-licheniformis clade along a salinty gradient in an
arid soil environment
1
1
1
1
1
Sarah Kopac* , Stephanie Aracena , Melanie Koren , Jessica Sherry , Jane Wiedenbeck ,
1
1
1
2
1
Menherit Goodwyn , Jonathan Chabon , Rob Clark , Alexander Rooney , Fredrick Cohan
1
2
Wesleyan University, United States, USDA, United States
190A
Novel and conserved bacterial mercuric reductase genes (merA) and mercury
resistance plasmids in High Arctic snow, freshwater and sea-ice brine
1
1
2
3
3
Niels Kroer* , Annette Møller , Tamar Barkay , Martin A. Hansen , Anders Norman , Lars H.
3
3
Hansen , Søren J. Sørensen
1
2
University of Aarhus/Department of Environmental Science, Denmark, Rutgers, Department
3
of Biochemistry and Microbiology, Rutgers, USA, University of Copenhagen, Department of
Biology, Denmark
191A
Adaptive evolution of Pseudomonas stutzeri under denitrifying conditions
Elin Lilja*, David Johnson
ETH Zürich/Eawag, Switzerland
406B
Molecular characterization of Leptospira borgpetersenii isolates of field rats (Rattus
norvegicus) by RAPD, Rep-PCR, MLVA and MLST typing
Kalimuthusamy Natarajaseenivasan*, Murugesan Kanagavel
Bharathidasan University, India
192A
Less virion's components – more chances to survive?
1
1
2
1
1
Dmitry Nosik* , Nickolay Nosik , Elli Kaplina , Olga Lobach , Petr Deryabin
1
The D.I.Ivanovsky Institute of Virology of the Ministry of Health of the Russian
2
Federation, Russia, Technomedservice Company, Russia
193A
Evolution in fluctuating temperature
1
2
3
3
Kati Saarinen* , Jouni Laakso , Leena Lindström , Tarmo Ketola
1
2
Centre of Excellence in biological interactions, University of Jyväskylä, Finland, University of
3
Helsinki, Finland, University of Jyväskylä, Finland
194A
Genome characterisation of the genus Francisella reveals insight into similar
evolutionary paths in pathogens of mammals and fish
1
1
1
1
1
Andreas Sjödin , Caroline Öhrman* , Johanna Thelaus , Kerstin Svensson , Jon Hallander ,
1
2
3
2
1
Petter Lindgren , Samuel Duodu , Anders Johansson , Duncan Colquhoun , Pär Larsson ,
1
Mats Forsman
1
2
FOI - Swedish Defence Research Agency, Sweden, Norwegian Veterinary Institute, Norway,
3
Umeå University, Sweden
172
PS25 – Microbial Origin and Evolution
Thursday 23 August
195A
Comparative genomics of Herpes viruses, a case study of host parasite co-evolution
1
2
2
3
Tatiana Vallaeys* , Lionel Frangeul , Nicolas Berthet , Ines Ben Chobba , Jean Christophe
4
5
2
6
Avarre , Tristan Renault , Antoine Gessain , Jean Robert Bonami
1
2
Université de Montpellier 2, sceinces et techniques, France, Institut Pasteur, France,
3
4
Université de Montpellier 2 and Faculté des Sciences de Sfx, Tunisia, IRD, France,
5
6
IFREMER, France Univerité de Montpellier 2, France
196A
Evolution of antibiotic resistance in the presence of drug gradients
Bartlomiej Waclaw*, Philip Greulich, Rosalind Allen
School of Physics, Edinburgh University, United Kingdom
197A
Characterization of a novel sulfate-reducing bacterium, as the second isolated member
of the Desulfotomaculum subcluster Ie
Miho Watanabe*, Hisaya Kojima, Manabu Fukui
Institute of Low Temperature Science, Hokkaido University, Japan
198A
Use of valyl- and ile-tRNA synthetase genes interparalog distance for delineating the
phylogenies of Methanopyrus species and searching for primitive Methanopyrus
Zhiliang Yu*
College of Biological and Environmental Engineering, Zhejiang University of
Technology, China
198B
Identification of plantpatogens: DNA barcoding and proteome analysis reveal a group
of nonpathogenic Clavibacter bacteria residing on tomato seed and closely related to
the quarantine Clavibacter michiganensis subsp. michiganensis
1
1
2
2
1
Joanna Zaluga* , K. Heylen , J. Van Vaerenbergh , M. Maes , P. De Vos
1
2
Ghent University/ Laboratory of Microbiology, Belgium, Institute for Agricultural and Fisheries
Research-ILVO, Belgium
199A
Nature and Nurture: the evolution and adaptation of Epsilonproteobacteria in deep-sea
hydrothermal vents
Ying Zhang*, Stefan Sievert
1
Woods Hole Oceanographic Institution, USA
PS26 – Novel High-Resolution Technologies
500A
An open source autonomous water sampler for aquatic microbial ecology
1
1
2
2
David DeFilippis* , Creston Flemming , James Mutschler , Katherine McMahon , Matthew
1
Smith
1
2
University of Wisconsin-Milwaukee School of Freshwater Sciences, USA, University of
Wisconsin-Madison, USA
502A
Developing low cost, near real time methods for detecting and quantifying microbial
toxins
Creston Flemming*, David DeFilippis, Matthew Smith
University of Wisconsin-Milwaukee School of Freshwater Science, USA
503A
Studying bacterial swarming motility using atomic force microscopy
Annika Gillis*, Vincent Dupres, Yves F. Dufrêne, Jacques Mahillon
Universite catholique de Louvain-ELIM, Belgium
173
PS26 – Novel High-Resolution Technologies
Thursday 23 August
504A
The gut microbiotassay – a high-throughput real-time PCR chip combined with next
generation sequencing
1
1
2
Marie Louise Hermann* , Kerstin Skovgaard , Lars Mølbak
1
2
Technical University of Denmark/National Veterinary Institute, Denmark, Chr. Hansen,
Denmark
551B
A novel fluorescent reporter system for monitoring and identifying RNase III activity
and its target RNAs
1
2
2
1
2
Kwang-sun Kim , Soohyun Lee* , Sunyoung Park , Choong-Min Ryu , Sun bin Kang
1
2
University of Science and Technology / KRIBB, South Korea, KRIBB, South Korea
505A
Gold-ISH for linking microbial phylogeny and metabolic activities by using nanoSIMS
1
2
2
3
1
1
Kengo Kubota* , Yuki Morono , Motoo Ito , Takeshi Terada , Shogo Itezono , Hideki Harada ,
2
Fumio Inagaki
1
2
3
Tohoku University, Japan, JAMSTEC, Japan, Marine Works Japan LTD, Japan
506A
Flow cytometric analysis of freshwater viruses
1
1
1
2
1
Lili Ma* , Hui Yu , Lei Li , Thomas Egli , Yingying Wang
1
2
College of Environmental Science and Engineering, Nankai University, China, Eawag, Swiss
Federal Institute of Aquatic Science and Technology, Switzerland
507A
To see the invisible: a new plastic film-sampling approach for the comprehensive
analysis of microbial community architecture
1
2
2
1
3
Olena Moshynets* , Anna Koza , Patricia Sterpaio , Svitlana Shpylova , Ludmyla Titova ,
4
5
2
David Cohen , Geert Potters , Andrew Spiers
1
Institute of Molecular Biology and Genetics of National Academy of Sciences of Ukraine,
2
3
Ukraine, The SIMBIOS Centre, University of Abertay Dundee, United Kingdom, Zabolotny
4
Institute of Microbiology and Virology of NAS of Ukraine, Ukraine, Migal Galilee Technology
5
Center, Israel, University of Antwerp, Belgium
508A
A biomolecular isolation framework for Eco-Systems Biology
Hugo Roume*, Emilie E.L Muller, Pranjul Shah, Paul Wilmes
University of Luxembourg - LCSB, Luxembourg
509A
Natural microbial community remediates oil in Australian hydrocarbon contaminated
coastal sediment
1
1
2
3
3
3
Renee Smith* , Eric Adetutu , Thomas Jeffries , John Weber , Samuel Aleer , Albert Juhasz ,
1
1
Andrew Ball , James Mitchell
1
2
3
Flinders University, Australia, University of Technology, Australia, University of South
Australia, Cooperative Research Centre for Contaminated Assessment and Remediation of
the Environment, Australia
509B
Community isotope arrays for sensitive resolution of substrate-species linkages in
natural microbial communities
1
2
3
2
Dieter Tourlousse* , Futoshi Kurisu , Tomohiro Tobino , Hiroaki Furumai
1
2
The University of Tokyo, Japan, Research Center for Water Environment Technology,
3
Graduate School of Engineering, The University of Tokyo, Japan, Environmental Science
Center, The University of Tokyo, Japan
174
PS26 – Novel High-Resolution Technologies
Thursday 23 August
PS27 – Plant-Microbe Interactions
510A
Genetic and symbiotic diversity of rhizobia isolated from Ethiopian soils
1
2
1
3
Tulu Degefu Abdi* , Endalkachew Wolde-meskel , Binbin Liu , Anne Willems , Ilse
3
1
Cleenwick , Åsa Frostegård
1
2
Norwegian University of Life Sciences (UMB), Norway, School of Plant and Horticultural
3
Sciences, Hawassa University, Ethiopia, Ghent University, Belgium
511A
Microbial ACC-deaminase biotechnology for improving the efficiency of Rhizobium
inoculation in mung bean under salt affected conditions
1
2
2
2
Maqshoof Ahmad* , Zahir Ahmad Zahir , Muhammad Arshad , Muhammad Khalid , Moazzam
1
3
Jamil , Sajid Mehmood Nadeem
1
University College of Agriculture and Environmental Sciences, The Islamia University of
2
Bahawalpur, Pakistan, Institute of Soil and Environmental Sciences, University of Agriculture
3
Faisalabad, Pakistan, College of Agriculture, DG Khan, Pakistan
512A
Honeybees govern bacterial communities composition in floral nectar
Yana Aizanberg-Gershtein*, Ido Izhaki, Malka Halpern
University of Haifa, Oranim, Israel
512B
Molecular characterization of nitrogen-fixing bacteria and their colonization pattern in
mangrove roots
Gabriela Alfaro-Espinoza*, Matthias Ullrich
Jacobs University Bremen, Germany
513A
Leafy vegetable - human pathogen interactions: a farm-to-fork perspective
1
2
2
2
2
Beatrix Alsanius* , Lars Mogren , Maria Grudén , Christine Larsson , Mehboob Alam ,
2
2
3
4
4
Stephen Burleigh , Crister Olsson , Sofia Windstam , Sofia Boqvist , Ivar Vågholm , Karin
4
5
5
2
Söderqvist , Siv Ahrné , Göran Molin , Lilly Kristensen
1
2
Swedish University of Agricultural Sciences, Sweden, SLU, Dept of Horticulture, Sweden,
3
4
State University of New York, Biology Dept, USA, SLU, Dept of Veterinary Biomedicine and
5
Health, Sweden, Lund University, Food Hygiene, Sweden
514A
Direct image-based enumeration of microbes decomposing biomass feedstocks
Jesus G. Alvelo-Maurosa*, Susan B. Leschine
University of Massachusetts, Amherst, United States
515A
Isolation and characterization of Aurantimonas species responding to legume
nodulation genonotypes
1
2
1
1
1
Mizue Anda* , Seishi Ikeda , Shima Eda , Hisayuki Mitsui , Kiwamu Minamisawa
1
2
Tohoku University, Japan, National Agricultural Research Center for Hokkaido Region,
Japan
515B
Assessing the sources of biological nitrogen fixation in a rice-field incubation system
15
using field N2–gas feeding
1
2
1
2
Qicheng Bei , Georg Cadisch , Zubin Xie , Frank Rasche*
1
2
Chinese Academy of Sciences / Institute of Soil Science, China, University of Hohenheim /
Institute of Plant Production and Agroecology in the Tropics and Subtropics, Germany
516A
Investigation of the plant primary metabolism in response to Verticillium attack
Anja Buhtz*, Mandy Heinze, Rita Grosch
Leibniz-Institute of Vegetable and Ornamental Crops Großbeeren, Germany
517A
Wild and domesticated grapevines: endophyte community structure and differences
1
1
1
2
Andrea Campisano* , Sohail Yousaf , Michael Pancher , Barbara Sara Biagini
1
2
Fondazione Edmund Mach, Italy, Università di Milano, Italy
175
PS27 – Plant-Microbe Interactions
Thursday 23 August
518A
Botryosphaeria associated with Acacia mangium and Pinus caribaea var hondurensis
Venezuelan based on morphology and DNA sequence data
1
2
3
Feraida Castro-Medina* , Sari R. Mohali , Walter. D. Gubler
1
2
Universidad Nacional Experimental de Guayana, Venezuela, Universidad de los Andes,
3
Venezuela, University of California, United States
519A
Genomic Investigation of Plant Growth-Promotion in Herbaspirillum sp. Strain GW103
Jong-Chan Chae*, Gun Woong Lee, Kui-Jae Lee
Chonbuk National University, South Korea
520A
Whitefly infestation elicits defense responses against bacterial pathogens on the leaf
and root and belowground dynamic change of microflora in pepper
1
1
2
3
3
Hye Kyung Choi* , Soohyun Lee , Hwe-Su Yi , Boyoung Lee , Choong-Min Ryu
1
2
3
Lee, South Korea, KRIBB, South Korea, University of Science and Technology / KRIBB,
South Korea
521A
Seed defense priming by rhizobacteria
Hye Kyung Choi*, Geun Cheol Song, Choong-Min Ryu
University of Science and Technology / KRIBB, South Korea
521B
Cytokinin-elicited plant immunity by bacterial airborne signal
1
1
1
2
2
Hye Kyung Choi* , Hyo Bee Park , Soohyun Lee , Jaemyung Choi , Ildoo Hwang , Hitoshi
3
1
Sakakibara , Choong-Min Ryu
1
2
University of Science and Technology / KRIBB, South Korea, Pohang University of Science
3
and Technology, South Korea, RIKEN, Japan
522A
Elicitation of induced resistance of Arabidopsis against Pseudomondas syringae by a
C13 volatile organic compound produced by a rhizobacterium Paenibacillus polymyxa
1
1
1
2
1
Hye Kyung Choi* , Soohyun Lee , Boyoung Lee , Mohamed A. Farag , Hyo Bee Park ,
3
1
Joseph W. Kloepper , Choong-Min Ryu
1
3
University of Science and Technology / KRIBB, South Korea, Cairo University, Egypt,
4
Auburn University, United States
523A
Isolation Indigenous Acetic Acid Bacteria from Different Ecosystem
Noppawan Dachraksa*
Dept. of Biology, Thailand
524A
Do we understand AM fungal dynamics sufficiently to utilise the symbiosis to maintain
crop yield in the future?
Tim Daniell*, Jane Davidson, Sandra Caul, Alexander van den Bos, Katherine Becker, Alison
Bennett
The James Hutton Institute, United Kingdom
525A
Nitrogen fixation efficiency of indigenous rhizobial strains isolated from soils of
southwest Nigeria
1
2
Michael Olajire Dare* , Abisoye Ojo
1
2
Federal University of Agriculture, Abeokuta, Nigeria, University of Ibadan, Nigeria
526A
Genomics and ecology of Lysobacter species
1
2
1
Irene de Bruijn* , Joeke Postma , Jos Raaijmakers
1
2
Wageningen UR, Netherlands, Plant Research International, Netherlands
176
PS27 – Plant-Microbe Interactions
Thursday 23 August
527A
Transcriptomic analysis of Methylobacterium mesophilicum strain SR1.6/6 in the
interaction with soybean seedling roots
1
2
3
3
Francisco Dini-Andreote* , Anderson Ferreira , Milene Ferro , Maurício Bacci , Fernando Dini
4
1
4
Andreote , Jan Dirk van Elsas , Welington Luiz Araújo
1
2
University of Groningen, Netherlands, Brazilian Agricultural Research Corporation –
3
4
Embrapa Agrosilvopastoral, Brazil, São Paulo State University, Brazil, University of Sao
Paulo, Brazil
527B
Role of climate change in terrestrial microbial feedbacks and disease spread
Barbara Drigo*, Ian C. Anderson, Brajesh K. Singh, John W.G. Cairney
Hawkesbury Institute for the Environment, University of Western Sydney, Australia
528A
Evolution of cooperation in arbuscular mycorrhizal fungi
1
2
1
Marie Duhamel* , E. Toby Kiers , Philippe Vandenkoornhuyse
1
2
Université de Rennes1 UMR 6553, France, Vrije Universiteit of Amsterdam - Animal
Ecology, Netherlands
529A
Bacterial rhizosphere communities of eight Salix lines with different potential to
accumulate Cd and Zn
1
1
2
2
3
Katharina Fallmann* , Melanie Kuffner , Brigitte Hai , Michael Schloter , Thomas Rattei ,
3
4
1
Dmitrij Turaev , Markus Puschenreiter , Angela Sessitsch
1
AIT Austrian Institute of Technology GmbH, Health & Environment Department, Austria,
2
Helmholtz Zentrum München, German Research Center for Environmental Health, Germany,
3
4
University of Vienna, Department of Computational Systems Biology, Austria, BOKUUniversity of Natural Resources and Life Sciences, Department of Forest and Soil Sciences,
Austria
530A
Biostimulation of the native and introduced quorum-quenching Rhodococcus
erythropolis populations for protecting potato plants against the soft-rot bacterial
pathogens
Denis Faure*, Amélie Cirou, Nicolas Mothe, Samuel Mondy, Mélanie Tannières, Anthony
Kwasiborski, Yves Dessaux
CNRS, France
531A
Miicrobispora spp. are the dominant actinobacterial endophytes of Australian rice
plants
Christopher Franco*, Fitri Widiantini
Flinders University, Australia
532A
Potential for increased N2O emissions from denitrification in vegetated areas in a free
water surface constructed wetland
1
1
1
2
1
Arantzazu García Lledó* , Ariadna Vilar-Sanz , Rosalia Trias , Sara Hallin , Lluís Bañeras
1
2
University of Girona, Spain, Swedish University of Agricultural Sciences, Sweden
533A
Culture and metagenomic assessment of microbial communities associated with
bioenergy crop plants
1
1
1
2
1
1
Aaron Garoutte* , Adina Howe , Jiarong Guo , Eric Cardenas , Julian Yu , Trish Eddie ,
3
4
1
Ederson da C Jesus , Adriana Lopes dos Santos , James Tiedje
1
2
3
Michigan State University, USA, University of British Columbia, Canada, Embrapa Agrobiol,
4
Brazil, São Paulo University, USA
533B
Interactions between root hairs and soil microorganisms – impacts on phosphate
acquisition
1
1
1
2
1
Timothy George* , Lawrie Brown , Gracie Barrett , Helen Cunnold , Roy Neilson , Philip
1
White
1
2
James Hutton Institute, United Kingdom, University of St Andrews, United Kingdom
177
PS27 – Plant-Microbe Interactions
Thursday 23 August
534A
Bacterial diversity and plant growth-promotion potential in Andean potato rhizosphere
soils
1
2
2
2
Jonas Ghyselinck* , Eileen O'herlihy , Barbara Doyle Prestwich , Siva Velivelli , Koenraad
1
1
1
1
Van Hoorde , Hoste Bart , Kim Heylen , Paul De Vos
1
2
Ghent University, Belgium, University College Cork, Ireland
535A
Effect of supplementation of mixed ruminal microflora on bioconversion of waste in
biogas using cow dung as co-substrate
Gunjan Goel*, Srikant Kaushik
Maharishi Markandeshwar University, India
536A
Effect of nitrogen input on carbon assimilation and photosynthate partitioning within
the plant-microbe-soil system in the rhizosphere of beech
1
2
2
2
Silvia Gschwendtner* , Tillman Lueders , Franz Buegger , Michael Schloter
1
2
Technische Universität München, Germany, Helmholtz Zentrum München, Germany
537A
Attenuated immune response to endophytic bacteria favours successful interaction
with host plant
Garima Gupta*, Abhijit Das, Prabhat Jha
Birla Institute of Technology and Sciences, Pilani, India
538A
Seasonal variation in protease enzyme production in ectomycorrhizas and soil solution
in boreal Scots pine forest
Jussi Heinonsalo*, Kirsi Bäcklund, Annele Hatakka, Timo Vesala, Jukka Pumpanen
University of Helsinki, Finland
539A
The genus Burkholderia: the good, the bad, and the ugly
1
2
3
1
Ann M. Hirsch* , Paulina Estrada-de los Santos , George Weinstock , Annette Angus
1
2
3
UCLA, USA, Instituto Politécnico Nacional, Mexico, Washington University, USA
539B
Construction of a phytoremediation system using vetiver grass and endophytic
bacteria, Achromobacter xylosoxidans F3B for the remediation of phenolic pollutants
Ying-Ning Ho*, Dony Chacko Mathew, Hsing-Mei Chiang, Zhang-Gong Hao, Chieh-Chen
Huang
National Chung-Hsing University, Taiwan
540A
Will selection conditions alter root-microbial relationships and influence carrot
productivity in organically managed production systems?
1
1
2
3
3
Lori Hoagland* , Jessica Brazelton , Christopher Zelaya , Micaela Colley , John Navazio ,
4
Phillip Simon
1
2
3
Purdue University, USA, National Agricultural University of Honduras, Honduras, Organic
4
Seed Alliance, USA, USDA-ARS Vegetable Crops Research Unit, USA
541A
Rhizobia as plant growth promoter for maize under reduced water conditions
Muhammad Baqir Hussain*, Zahir Ahmad Zahir, Hafiz Naeem Asghar
University of Agriculture, Faisalabad, Pakistan
542A
Endophytic bacterial diversity of balloon flower (Platycodon grandiflorum) root and
their antimicrobial activities based on plant age
Shah Md. Asraful Islam*
Patuakhali Science and Technology University, Bangladesh
543A
Multiplex-PCR for quick strain-identification of plant-pathogenic bacteria, phytoplasma
Shigeyuki Kakizawa*, Yoichi Kamagata
National Institute of Advanced Industrial Science and Technology (AIST), Japan
178
PS27 – Plant-Microbe Interactions
Thursday 23 August
543B
Competition between subalpine grassland plant species and microbes for nitrogen in
the rhizosphere under different redox conditions - a greenhouse approach
1
2
1
Eva-Maria Kastl* , Silvia Gschwendtner , Michael Schloter
1
2
Helmholtz Zentrum München, Environmental Genomics, Germany, Technische Universität
München, Institute of soil ecology, Germany
544A
Horticultural cropping systems in the shadow of environmental demands
1
1
1
1
Sammar Khalil* , Anna Karin Rosberg , Samareh Gharaie , Malin Hultberg , Karl-Johan
1
2
2
3
1
Bergstrand , Justine Sylla , Walter Wohanka , Nicola Gruyer , Beatrix Alsanius
1
Department of Horticulture- Microbial Horticulture Group, Swedish University of Agricultural
2
3
Sciences, Sweden, Geisenheim Research Center, Germany, Centre de recherhe en
Horticulture, Pavillon Envirotron, Université Laval, Canada
545A
Diversity of Acetic Acid Bacteria Isolated from Tropical Thai Fruits
1
1
2
Tharinee Klawpiyapamornkun* , Sakunnee Bovonsombut , Sittisin Bovonsombut
1
2
ChiangMai University, Thailand, Maejo University, Thailand
546A
The mycobiome of wheat
1
1
1
2
Kamilla Knorr* , Annemarie F. Justesen , Lise N. Jørgensen , Hans Pinnschmidt , Jiaoyu
1
1
Wang , Mogens Nicolaisen
1
2
Department of Agroecology, Aarhus University, Denmark, Department of Medical Biometry
and Epidemiology, University Medical Center Hamburg-Eppendorf, Germany
546B
Innate immunity, salicylic acid, and Arabidopsis phyllosphere microbiome
1
2
1
James M Kremer* , Sheng Yang He , James Tiedje
1
2
Michigan State University, USA, GBMF/HHMI, Michigan State University, USA
547A
Stimulation of microbial metabolism by inefficient herbivory
1
2
3
Jennifer Krumins* , Valdis Krumins , Wim van der Putten
1
2
3
Montclair State University, USA, Rutgers University, USA, Netherlands Institute of Ecology,
Netherlands
548A
Hybrid poplar-associated strains of Burkholderia fungorum capable of degrading
polycyclic aromatic hydrocarbons share dbt catabolic genes
1
1
1
2
1
Silvia Lampis , Marco Andreolli* , Marika Poli , Kim Yrjala , Giovanni Vallini
1
2
University of Verona, Dept. of Biotechnology, Italy, Department of Biosciences, University of
Helsinki, Finland
549A
Linking microbial diversity and activity of olive rhizosphere to management systems in
commercial orchards at Southern Spain
1
1
2
1
2
Blanca B Landa* , Miguel Montes-Borrego , Madis Metsis , David Gramaje , Jaak Simm ,
3
1
Javier Tamames , Juan A Navas-Cortés
1
2
Institute for Sustainable Agriculture-CSIC, Spain, Tallin University of Technology, Estonia,
3
CNB-CSIC, Spain
550A
Proteome analysis of Arabidopsis seedlings exposed to bacterial volatiles
1
2
1
2
2
Soohyun Lee* , Young Sang Kwon , Hyo Bee Park , Ki Soo Han , Jung Han Lee , Kyunghee
3
4
5
2
2
1
Lee , Woo Sik Chung , Mi-Jeong Jeong , Hee Kyu Kim , Dong-Won Bae , Choong-Min Ryu
1
2
3
KRIBB, South Korea, Gyeongsang National University, South Korea, Yeungnam University,
4
South Korea, Plant Molecular Biology and Biotechnology Research Center, South Korea,
5
Rural Development Administration, South Korea
179
PS27 – Plant-Microbe Interactions
Thursday 23 August
551A
Foliar aphid feeding recruits rhizosphere bacteria and primes plant immunity against
pathogenic and non-pathogenic bacteria in pepper
Soohyun Lee*, Boyoung Lee, Choong-Min Ryu
University of Science and Technology / KRIBB, South Korea
552A
Spatiotemporal variation in bacterial community composition on leaves of field-grown
lettuce
Johan Leveau*, Gurdeep Rastogi, Adrian Sbodio, Jan Tech, Trevor Suslow, Gitta Coaker
University of California - Davis, United States
552B
Phylogenetic distribution of traits associated with plant colonization in Escherichia coli
1
1
1
1
1
Sacha Lucchini* , Guillaume Meric , Katherine Kemsley , Laura Searle , Ida Porcelli , Daniel
2
1
Falush , Elizabeth Saggers
1
2
Institute of Food Research, United Kingdom, Max-Planck Institute for Evolutionary
Anthropology, Germany
553A
Selective mobilisation of rhizosphere bacterial populations upon groundwater recharge
1
1
2
2
Tillmann Lueders* , Doerte Dibbern , Andreas Schmalwasser , Kai-Uwe Totsche
1
2
Institute of Groundwater Ecology, Germany, Institute for Geosciences, Germany
554A
Evaluation of mutants from Rhizobium tropici with biotechnological potential
Tereza Cristina Luque Castellane, Eliana Gertrudes de Macedo Lemos, Manoel Victor Franco
Lemos*
UNESP / FCAV, Brazil
555A
Investigation of key species of dark septate endophytic fungi from different habitats
1
2
Rola Mahmoud* , Kazuhiko Narisawa
1
2
Tokyo university of agriculture and technology, Japan, Ibaraki university, Japan
556A
The metabolic profile of soybean roots inoculated with Bradyrhizobium japonicum
under moisture deficiency
Pavlo Mamenko*, Alla Levishko, Sergii Kots, Nataliya Melnykova, Ruslan Iakymchuk,
Lyudmyla Mykhalkiv
Institute of Plant Physiology and Genetics of NAS of Ukraine, Ukraine
557A
Comparison of different metagenomic DNA extraction protocols to study the
endophytic microbial communities of Sorghum bicolor, Pennisetum glaucum and
Arachis villosulicarpa
Mapula A.K. Maropola, Jean-Baptiste Ramond*, Marla I. Tuffin
Institute for Microbial Biotechnlogy and Metagenomics (IMBM), University of the Western
Cape, South Africa
558A
How can plant-associated pseudomonads with antifungal activity become insect
pathogens
1
1
2
2
1
Monika Maurhofer , Beat Ruffner , Maria Péchy-Tarr , Peter Kupferschmied , Pascale Flury* ,
2
Christoph Keel
1
Swiss Federal Institute of Technology Zürich / Plant Pathology, Institute of Integrative
2
Biology, Switzerland, University of Lausanne/Department of Fundamental
Microbiology, Switzerland
237B
Microbial endophytes from Warburgia ugandensis - diversity and adption to host
drimane sesquiterpenes
1
2
3
3
2
Birgit Mitter* , Sigrid Drage , Alice Muchugi , Rhamni H. Jamnadass , Franz Hadacek , Angela
4
Sessitsch
1
2
AIT Austrian Institute of Technology, Austria, Department of Chemical Ecology and
3
Ecosystem Research, University of Vienna, Austria, World Agroforestry Centre (ICRAF),
4
Kenya, AIT Austrain Institute of Technology, Austria
180
PS27 – Plant-Microbe Interactions
Thursday 23 August
558B
Phenazine antibiotic production regulated by two quorum sensing systems in
Pseudomonas chlororaphis subsp. aurantiaca StFRB508 and its antifungal activity
against Phytophthora infestans
1
1
1
2
Tomohiro Morohoshi* , Wen-zhao Wang , Tomonori Sutou , Nobutaka Someya , Tsukasa
1
Ikeda
1
2
Utsunomiya University, Japan, Hokkaido Agricultural Research Center, Japan
559A
Symbiotic associations with beta-rhizobia are deep-rooted within the tribe Mimoseae
1
2
3
2
4
Lionel Moulin* , Caroline Bournaud , Miguel Santos , Pierre Tisseyre , Michele Silva , Sergio
4
3
5
2
M. de Faria , Eduardo Gross , Euan K. James , Yves Prin
1
2
IRD-LSTM, France, LSTM-UMR113 CIRAD/IRD/UM2/SupaGro Usc INRA, France,
3
4
Universidade Estadual de Santa Cruz, Brazil, Laboratório de Leguminosas Florestais5
EMBRAPA, Brazil, The James Hutton Institute, United Kingdom
560A
Bacterial succession in Populus rhizosphere in rhizoremediation
1
1
1
2
3
1
Shinjini Mukherjee* , Hyunseok Choi , Timo Sipilä , Jaak Truu , Pertti Pulkkinen , Kim Yrjälä
1
2
3
University of Helsinki, Finland, University of Tartu, Estonia, Finnish Forest Research
Institute, Finland
561A
Evidence for presence and dehalogenation activity of chloromethane-degrading
bacteria in the Arabidopsis thaliana phyllosphere: strain isolation and molecular
analysis
1
1
1
2
1
Thierry Nadalig* , Farhan Ul Haque , Sandro Roselli , Hubert Schaller , Françoise Bringel ,
1
Stéphane Vuilleumier
1
2
University of Strasbourg, UMR 7156 CNRS, France, University of Strasbourg, UPR 2357
CNRS, France
562A
Phenazine-1-carboxylic acid production by Pseudomonas spp. LBUM223 contributes to
repressing thaxtomin A biosynthesis in the pathogen Streptomyces scabies under soil
conditions
1
1
2
1
Amy Novinscak* , Tanya Arseneault , Claudia Goyer , Martin Filion
1
2
Université de Moncton, Canada, Agriculture and Agri-Food Canada, Canada
563A
Development of the root microbiome: from seed to root systems, and emphasis on
characteristics of plant-beneficial bacterial communities
1
2
3
Maya Ofek , Dror Minz* , Yitzhak Hadar
1
2
Agricultural Research Organization of Israel, Israel, Institute of Soil, Water and
3
Environmental Sciences, Agricultural Research Organization, Israel, The Robert H. Smith
Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Israel
564A
Baseline survey of the anatomical microbial ecology of an important food plant:
Solanum lycopersicum
1
2
3
1
1
Andrea Ottesen* , Antonio Pena , James Robert White , Cong Li , James Pettengill , Sarah
1
4
1
1
1
2
1
Allard , Steven Rideout , Thomas Hill , Marc Allard , Errol Strain , Rob Knight , Eric Brown
1
2
3
FDA, USA, University of Colorado, USA, University of Maryland School of Medicine, USA,
4
Virginia Polytechnic Institute and State University, USA
564B
Study of fungal phyllosphere communities from transgenic cotton with cry1ac gene
1
1
1
1
1
Jiangang Pan , Honggyan Qi* , Anzhou Ma , Zhihui Bai , Guoqiang Zhuang , Hongxun
2
Zhang
1
Research Center for Eco-Environmental Sciences, Chinese Academy of
2
Sciences, China, Graduate University of Chinese Academy of Sciences, China
565A
Temperature and climate affect the endophytes community in grapevine
Michael Pancher*, Andrea Campisano
Fondazione Edmund Mach, Italy
181
PS27 – Plant-Microbe Interactions
Thursday 23 August
566A
Influence of Bacillus amyloliquefaciens FZB42 on the rhizosphere bacterial community
of field grown lettuce (Lactuca sativa)
1
2
3
1
3
Soumitra Paul Chowdhury* , Rita Grosch , Kristin Dietel , Michael Schmid , Rainer Borriss ,
1
Anton Hartmann
1
2
Helmholtz Zentrum München, Germany, Leibniz-Institut für Gemüse und Zierpflanzenbau
3
Großbeeren/ Erfurt e.V, Germany, ABiTEP GmbH, Germany
567A
Molecular characterization of the interaction between antimicrobial metabolite
producing Pseudomonas spp. and Clavibacter michiganensis subsp. michiganensis in
tomato
Mélanie M Paulin*, Carine Lanteigne, Martin Filion
Université de Moncton, Canada
568A
An α-tubulin of the ectomycorrhizal fungus Hebeloma cylindrosporum is essential for
symbiosis establishment
1
1
1
2
2
Aurélie Perrin* , Clément Pellegrin , Jeanne Doré , Cindy Dieryckx , Vincent Girard , Jean
3
1
1
Phillipe Combier , Roland Marmeisse , Gilles Gay
1
2
Université Claude Bernard LYON1 UMR 5557, France, Université Claude Bernard LYON1
3
UMR 5240, France, Universtié Paul Sabatier UMR CNRS 5546, France
569A
Genotypic effects of Norway spruce host trees on the associated communities of
ectomycorrhizal and needle endophytic fungi
Tiina Rajala*, Sannakajsa Velmala, Matti Haapanen, Taina Pennanen
Finnish Forest Research Institute, Finland
570A
Enterobacter radicincitans sp. nov. DSM16656 a novel and efficient PGPB strain
Silke Ruppel*, Katja Witzel, Anita Brock, Beatrice Berger
Leibniz-Institute of Vegetable and Ornamental Crops, Germany
570B
The antifungal chitinases of soil isolated Bacillus sp. and its potential role in biological
control
1
2
Stefan Russel* , Urszula Jankiewicz
1
2
Swedspan Polska Sp.z o.o., Poland, Warsaw University for Life Science, Poland
571A
Archaea associated with Populus and its surrounding soil and trees
1
1
1
2
2
Migun Shakya* , Christopher W. Schadt , Mircea Podar , Zamin Yang , Marilyn Kerley ,
2
2
Mitchel J. Doktycz , Gerald Tuskan
1
2
University of Tennessee / Oak Ridge National Lab, USA, Oak Ridge National Lab, USA
571B
Microbial mediation of litter decomposition in soil: the role of plant roots
1
1
2
2
2
Shengjing Shi* , Donald Herman , Katherine Louie , Ben Bowen , Trent Northen , Eoin L.
2
1
Brodie , Mary Firestone
1
2
University of California, Berkeley, USA, Lawrence Berkeley National Laboratory, USA
572A
Microbial community analysis of potato-associated bacteria using both cultureindependent and -dependent methods
1
1
1
2
Nobutaka Someya* , Yuki Ohdaira Kobayashi , Akira Kobayashi , Tomohiro Morohoshi ,
2
1
Tsukasa Ikeda , Seishi Ikeda
1
Hokkaido Agricultural Research Center, National Agriculture and Food Research
2
Organization, Japan, Utsunomiya University, Japan
573A
Growth enhancement of Aster spp. by Rhizobacteria for revegetation of barren lakeside
area
Hong-Gyu Song*, Hyeok-Do Kwon
Kangwon National University, South Korea
182
PS27 – Plant-Microbe Interactions
Thursday 23 August
574A
Symbiosis with Mesorhizobium sp. affects Zn accumulation patterns among four
Anthyllis vulneraria subspecies
1
2
1
2
1
Souhir Soussou* , Stéphanie Mahieu , Brigitte Brunel , José Escarré , Michel Lebrun ,
3
3
4
Mohamed Banni , Hamadi Boussetta , Jean-Claude Cleyet-Marel
1
2
Montpellier SupAgro, UMR113, France, Centre d’Ecologie Fonctionnelle et Evolutive, CNRS,
3
4
France, Institut Supérieur Agronomique de Chott Meriam, Tunisia, INRA, UMR113, France
575A
Contribution of a biocontrol Pseudomonas strain to the total microbial load in
bioaerosols during experimental seed inoculation
1
1
1
1
Ingvar Sundh* , Anna-Ida Johnsson Holmberg , Annika I. Nilsson , Petter Melin , Margareta
2
3
Hökeberg , Anne Mette Madsen
1
2
3
Swedish University of Agricultural Sciences, Sweden, Mase Laboratories, Sweden, National
Research Centre for the Working Environment, Denmark
575B
Population dynamics and diversity of fungal communities in the rhizosphere soil of wild
medicinal plants in the upper flood plains of Assam, North Eastern India
Sorokhaibam Sureshkumar Singh*, Chumi Khanikar
North Eastern Regional Institute of Science & Technology, India
576A
Plant surfaces select for ammonia oxidizing bacteria in alkaline aquatic environments
1
1
1
1
Rosalia Trias* , Arantzazu García-Lledó , Ariadna Vilar-Sanz , Olaya Ruiz-Rueda , Sara
2
1
Hallin , Lluis Bañeras
1
2
Institute of Aquatic Ecology. University of Girona, Spain, Swedish University of Agricultural
Sciences, Sweden
577A
Bacterial volatiles suppress growth of fungal pathogens
1
1
2
1
Maaike van Agtmaal* , Maria Hunscheid , Angela Straathof , Wietse de Boer
1
2
Department of Microbial Ecology, Netherlands Institute of Ecology, Netherlands, Department
of Soil Quality, Wageningen University, Netherlands
578A
Associations between bacteria and ectomycorrhizal roots investigated with highthroughput sequencing
1
2
3
3
4
Unni Vik* , Ramiro Logares , Tor Carlsen , Rakel Blaalid , Ole Andreas Økstad , Anne-Brit
4
3
Kolstø , Håvard Kauserud
1
2
3
University of Oslo, Norway, Institut de Ciències del Mar, Spain, University of Oslo/
4
Department of Biology, Norway, University of Oslo/School of Pharmacy, Norway
578B
First dip into rhizosphere microbial community transcriptome
1
1
1
2
1
Milana Voronov-Goldman* , Maya Ofek , Noa Sela , Yitzhak Hadar , Dror Minz
1
2
Volcani center, Israel, Faculty of Agriculture, Hebrew University, Israel
579A
AidC, a novel N-acylhomoserine lactonase from the potato root-associated
Chryseobacterium sp. StRB126, a member of Cytophaga-Flavobacteria-Bacteroides
(CFB) group
1
2
3
2
Wenzhao Wang , Tomohiro Morohoshi , Nobutaka Someya , Tsukasa Ikeda
1
2
Utsunomiya University, Japan, Department of Material and Environmental Chemistry,
3
Utsunomiya University, Japan, Hokkaido Agricultural Research Center (HARC), National
Agriculture and Food Research Organization (NARO), Japan
579B
Co-operation between PGPR containing ACC-deaminase and Rhizobium spp. for
sustainable production of legumes
1
2
3
4
Zahir Zahir* , Saqib Akhtar , Maqshoof Ahmad , Hafiz Asghar
1
2
Institute of Soil & Environmental Sciences, Pakistan, Department of Agriculture and Ecology,
3
Faculty of Life Sciences, University of Copenhagen, Højbakkegaard Allé, Denmark, College
4
of Agriculture, Islamia University Bahawalpur, Pakistan, Institute of soil & Environmental
Sciences, Pakistan
183
PS27 – Plant-Microbe Interactions
Thursday 23 August
580A
Influence of root exudates on the structural development of microbial communities in
the rhizosphere
Maren Ziegler*, Gerhard Welzl, Michael Schloter
Helmholtz Zentrum München / Environmental Genomics, Germany
581A
Losing the partner - now what? Effects of host loss on arbuscular mycorrhizal fungi
Frank Zielinski*, Tina Netzker, Thomas Fester
Helmholtz Centre for Environmental Research - UFZ, Germany
582A
Effect of pathogenic soil bacteria and growth promoting bacteria on glucosinolate
production in kale (Brassica oleracea var. Sabellica L.)
1
2
1
Matthias Zielke* , John Beck Jensen , Jørgen Mølmann
1
Bioforsk - Norwegian Institute for Agricultural and Environmental
2
Research, Norway, University of Tromsø, Norway
583A
PGPR characterization of strains isolated from goldenberry (Physalis peruviana L.)
rhizosphere in highland zones
1
2
2
2
Doris Zúñiga* , Katty Ogata , Ana Cumpa , Lindacelia Flores
1
Laboratorio de Ecología Microbiana y Biotecnología Marino Tabusso, Universidad Nacional
2
Agraria La Molina, Peru, Universidad Nacional Agraria La Molina, Peru
584A
The effect of sodium chloride and urea in PGPRs isolated from cotton and lima bean
from the valley of Ica, Peru
1
1
1
1
2
Doris Zúñiga , Elena Ramos , Carlos Arango* , Ricardo Santos , Juan Sanjuan
1
Laboratorio de Ecología Microbiana y Biotecnología Marino Tabusso, Universidad Nacional
2
Agraria La Molina, Peru, Estación Experimental del Zaidín, CSIC, Espana
PS28 – Predictive Models of Microbial Communities
065A
Selection of novel maturity indices for compost derived from grape pomace
1
2
1
2
Jimena Angulo , María Mercedes Martínez* , Rodrigo Ortega , Marc Janssens
1
2
Universidad Técnica Federico Santa María, Chile, Institute of Crop Science and Resource
Conservation INRES Bonn Universität, Germany
066A
Measuring species interactions during biofilm development
1
1
2
Arnaud Bridier* , Théodore Bouchez , Franck Jabot
1
2
IRSTEA-HBAN, France, IRSTEA-LISC, France
067A
Understanding a methanogenic benzene-degrading culture by metabolic models
1
1
2
1
1
Cleo Hanchen Ho* , Cheryl Devine , Robert Beiko , Eugene Ma , Elizabeth Edwards ,
1
Radhakrishnan Mahadevan
1
2
University of Toronto, Canada, Dalhousie University, Canada
344B
Amazonian deforestation simplifies soil bacterial interaction networks and alters
verrucomicrobial communities
1
2
2
2
Acácio A. Navarrete , Eiko E. Kuramae , Mathias de Hollander , George A Kowalchuk , Wim
2
2
1
Van der Putten , Johannes A. van Veen , Siu Mui Tsai*
1
2
CENA / USP, Brazil, NIOO/KNAW, Netherlands
184
PS28 – Predictive Models of Microbial Communities
Thursday 23 August
068A
Microbial regulation of biogeochemical cycles: evidence from a study on methane flux
and land-use change
1
2
3
4
5
Loïc Nazaries* , Yao Pan , Levente Bodrossy , Elizabeth Baggs , Peter Millard , J. Colin
6
1
Murrell , Brajesh K. Singh
1
University of Western Sydney, Hawkesbury Institute for the Environment, Australia,
2
3
Netherlands Institute of Ecology (NIOO-KNAW), Netherlands, CSIRO Marine & Atmospheric
4
Research, Australia, Institute of Biological and Environmental Sciences, University of
5
6
Aberdeen, United Kingdom, Landcare Research, New Zealand, Earth & Life Systems
Alliance, School of Environmental Sciences, University of East Anglia, United Kingdom
069A
Reconciling phylogeny and function during plant litter decomposition by highthroughput functional metagenomics
1
2
2
2
2
Mari Nyyssonen* , Claudia Weihe , Michael Goulden , Kathleen Treseder , Jennifer Martiny ,
2
2
1
Adam Martiny , Steven Allison , Eoin Brodie
1
2
Lawrence Berkeley National Laboratory, USA, University of California, USA
070A
Factors controlling the reproducibility of microbial community assembly
1
1
1
1
2
Eulyn Pagaling , Fiona Strathdee , Jana Schwarz-Linek , Rosalind Allen* , Andrew Free
1
2
School of Physics and Astronomy, University of Edinburgh, United Kingdom, School of
Biological Sciences, University of Edinburgh, United Kingdom
071A
A trait-based model of microbial-geochemical dynamics in deep-sea hydrothermal
plumes
1
2
2
1
3
Daniel Reed* , Houshuo Jiang , John Breier , Christopher Klausmeier , Brandy Toner ,
1
Gregory Dick
1
2
3
University of Michigan, USA, Woods Hole Oceanographic Institution, USA, University of
Minnesota, USA
072A
Microbial communities in time: A cross-biome synthesis
1
2
1
3
3
Ashley Shade* , J. Gregory Caporaso , Jo Handelsman , Rob Knight , Noah Fierer
1
2
3
Yale University, United States, Northern Arizona University, United States, University of
Colorado at Boulder, United States
073A
Application of response surface analysis for biodegradation of azo reactive textile dye
and chemical oxygen demand using Aspergillus foetidus based on central composite
design
Parveen Sharma*, Lakhvinder Singh
Guru Jambheshwar University of Science and Technology, India
074A
Comparison of Enterococcus qPCR analysis results from fresh and marine water
samples on two real-time instruments
Manohari Sivaganesan*, Richard Haugland, Manju Varma
US EPA, USA
075A
Computational modeling of microbial granulation processes for wastewater treatment
1
1
2
1
1
Satoshi Tsuneda* , Yuki Kagawa , Shinya Matsumoto , Junya Tahata , Naohiro Kishida ,
3
3
Cristian Picioreanu , Mark C. M. van Loosdrecht
1
2
3
Waseda University, Japan, Nagoya University, Japan, Delft University of
Technology, Netherlands
185
PS28 – Predictive Models of Microbial Communities
Thursday 23 August
PS29 – Protistan Ecology: beyond diversity
047A
Cellulose degradation and protist-bacteria symbiosis in the hindgut of lower termites as
inferred by stable isotope labeling and NanoSIMS imaging mass spectrometry
1
1
1
1
Kevin J. Carpenter , Peter K. Weber* , M. Lee Davisson , Jennifer Pett-Ridge , Michael I.
2
3
Haverty , Patrick J. Keeling
1
2
3
Lawrence Livermore National Laboratory, USA, University of California, USA, University of
British Columbia, Canada
048A
Influence of land-use intensity on the "realized" diversity and spatial distribution of
protists
1
1
2
2
1
Antonis Chatzinotas* , Karin Glaser , Daniel Keil , Sven Marhan , Brigitte Hai , Michael
1
2
1
Schloter , Ellen Kandeler , Hauke Harms
1
Helmholtz Center for Environmental Research-UFZ, Department of Environmental
2
Microbiology, Germany, Institute of Soil Science and Land Evaluation, Soil Biology Section,
University of Hohenheim, Germany
049A
Disentangling the drivers of microbial succession in response to nutrient input in
fluidic ecosystems
Ye Deng, Jizhong Zhou*, Ping Zhang, Kai Xue, Joy van Nostrand, Zhili He
University of Oklahoma, United States
050A
The FlowCAM, a tool for studying the planktonic protistan communities: diversity,
abundance, growth and grazing rate
1
2
2
1
1
Christine Dupuy* , Jun Gong , Xiaoli Zhang , Hélène Agogué , Laureen Beaugeard
1
2
University of La Rochelle, Laboratory LIENSs, France, Laboratory of Environmental
Microbiology, Yantai Institute of Coastal Zone Research, China
051A
Monitoring Emiliania huxleyi blooms using Wavelength Dispersive X-ray fluorescence
(WDXRF)
Jorun Egge*
University of Bergen /Dept og Biology, Norway
052A
Behavioural responses of Tetrahymena pyriformis exposed to microgradients of
hydrophobic organic chemicals
1
2
1
3
Dorothea Gilbert , Hans-Henrik Jakobsen , Anne Winding , Thomas Backhaus* , Philipp
1
Mayer
1
2
Aarhus University, Dept. of Environmental Science, Denmark, Aarhus University, Dept. of
3
Bioscience, Denmark, Univ. of Gothenburg, Dept. of Plant and Environmental Sciences,
Sweden
053A
Single cell genome sequencing of rumen entodinomorphid ciliates and their
endosymbiotic methanogens
Marissa Hirst*, Scott Dawson
University of California, Davis, United States
054A
Identification of Fe-only hydrogenase genes and hydrogenase activities of oxymanad
protists in the gut of the termtite Reticulitermes speratus
1
2
Jun-ichi Inoue* , Moriya Ohkuma
1
2
RIKEN/ Synaptech Inc., Japan, RIKEN BRC-JCM, Japan
055A
Diversified protist and cyanobacteria collection at NIES, Japan
Masanobu Kawachi*
National Institute for Environmental Studies, Japan
186
PS29 – Protistan Ecology
Thursday 23 August
056A
An inducible predator defense in the marine microalga Emiliania huxleyi
(Prymnesiophyceae) is linked to its heteromorphic haploid-diploid life cycle
Amelia Kolb*, Suzanne Strom
Western Washington University, United States
057A
When Si and glucose give neither diatoms nor bacteria. A zooplankton effect in an
arctic ecosystem?
1
2
3
2
Aud Larsen* , Jorun Egge , Jens C Nejstgaard , T Frede Thingstad Thingstad
1
2
3
Uni Research, Uni Environment, Norway, University of Bergen, Norway, Skidaway Institute
of Oceanography, University Systems of Georgia, USA
058A
Polyphasic characterization of microeukaryote diversity in alpine glacier forefields
Anna Lazzaro*
ETH Zurich/ Institute of Biogeochemistry & Pollutant Dynamics, Switzerland
059A
Molecular phylogeny and evolution of Parabasalia with new protein markers and
improved taxon sampling
1
2
3
Satoko Noda* , Eric Viscogliosi , Moriya Ohkuma
1
2
3
University of Yamanashi, Japan, Institut Pasteur de Lille, France, JCM, Bioresource Center,
RIKEN, Japan
060A
Estimation of protistan phagotrophy in a meromictic alpine lake
Andreas Oikonomou*, Maria Pachiadaki, Thorsten Stoeck
University of Kaiserslautern, Germany
061A
Dynamic of soil Free Living Amoebae community in three microenvironments from a
Mexican desert
1
2
3
Horacio Perez-Juarez* , Angelica Serrano -Vazquez , Salvador Rodriguez-Zaragoza , Jesus
3
3
Bazan-Cuenca , Victor M. Rivera-Aguilar
1
2
Doctorado en Ciencias Biomédicas, UNAM, Mexico, Posgrado en Ciencias Biologicas,
3
Facultad de Estudios Superiores-Iztacala, UNAM., Mexico, Facultad de Estudios SuperioresIztacala, UNAM., Mexico
062A
Ciliates and predators: a microcosm study to asses top-down effects on community
structure
Josué Santiago-Vera*, Dimaris Acosta-Mercado
University of Puerto Rico in Mayagüez, Puerto Rico
063A
Specific primers reveal new haptophyte groups and multiple independent colonisations
of freshwater environments
Marianne Simon*, Purificaciόn Lόpez-García, David Moreira, Ludwig Jardillier
Université Paris Sud, France
064A
Identification of genes involved in the response of Vibrio cholerae to predation by
heterotrophic protists
1
2
1
1
2
Shuyang Sun , Jie Hu , Zhiliang Chen , Marc Wilkins , Staffan Kjelleberg , Diane
1
McDougald*
1
2
University of New South Wales, Australia, Nanyang Technological University, Singapore
187
PS29 – Protistan Ecology
Thursday 23 August
PS30 – Syntrophy and Electron Flow in Microbial Communities
418A
Electron transfer in biofilms at the microscale
Haluk Beyenal*, Jerome Babauta
Washington State University, United States
419A
Syntrophic acetate oxidation in methanogenic reactors: an unexpected metabolic
behaviour analyzed by a polyphasic approach
1
1
1
2
1
Theodore Bouchez* , Julien Grossin-Debattista , Fan Lü , Ting-Di Wu , Olivier Chapleur ,
1
1
1
Ariane Bize , Laetitia Cardona , Laurent Mazéas
1
2
Irstea, France, Institut Curie, France
420A
Cooperation impacts structure and function in a syntrophic biofilm of Methanococcus
maripaludis and Desulfovibrio vulgaris
Kristen A. Brileya*, Mathew W. Fields
Montana State University, United States
420B
Syntrophaceae oixdize hexadecane via methanogenesis by DNA stable isotope probing
1
1
2
1
1
1
Lei Cheng , Cheng Ding* , Qiang Li , Qiao He , Li-rong Dai , Hui Zhang
1
2
Biogas Institute of Ministry of Agriculture, China, Key Laboratory of Development and
Application of Rural Renewable Energy, Ministry of Agriculture, China
421A
Genomic and proteomic insights into hydrogen limited growth of Methanospirillum
hungatei strain JF-1
1
2
2
3
1
Bryan Crable* , Robert Gunsalus , Lars Rohlin , Gregory Hurst , Michael McInerney
1
2
University of Oklahoma, United States, University of California, Los Angeles, United
3
States, Oak Ridge National Laboratory, United States
422A
Chromium responses and biofilm formation in Desulfovibrio vulgaris RCH-1, a sulfatereducing bacterium isolated from 100H chromium-contaminated groundwater, are
temperature-dependent
1
2
1
Lauren Franco* , Yuri Gorby , Matthew Fields
1
2
Montana State University, United States, University of Southern California, United States
423A
Methanogenic degradation of succinate by a syntrophic coculture of mesophilic
anaerobic microorganisms
Alexander Galushko*, Michael Wagner
Vienna University, Austria
424A
Syntrophic degradation of acetate by sulfidogenic coculture of anaerobic mesophilic
bacteria
1
2
Alexander Galushko* , Elena Rozanova
1
2
Vienna University, Austria, Institute of Microbiology RAS, Russia
425A
The impact of buffer capacity and conductivity on syntrophic propionic acid oxidation
in anaerobic granules
1
2
3
4
Natacha M.S. Juste-Poinapen* , Bernardino Virdis , Mark S. Turner , Korneel Rabaey ,
2
Damien J. Batstone
1
2
University of Queensland, Advanced Water Management Centre, Australia, The University of
3
Queensland, Advanced Water Management Centre, Australia, The University of Queensland,
4
School of Agriculture and Food Science, Australia, The Ghent University, Laboratory of
Microbial Ecology and Technology(LabMET), Belgium
425B
Effects of sunlight irradiation on electricity output from a paddy-field microbial fuel cell
1
1
1
2
1
Nobuo Kaku* , Natsuki Yonezawa , Dai Takahasi , Kazuya Watanabe , Atsuko Ueki , Katsuji
1
Ueki
1
2
Yamagata University, Japan, Tokyo University of Pharmacy and Life Sciences, Japan
188
PS30 – Syntrophy and Electron Flow in Microbial Communities
Thursday 23 August
426A
Electrode-respiring microbial community and electron flux in microbial fuel cells
applied with fermentable or not fermentable substrates
Taeho Lee*, Younghyun Park, Jiyun Seon, Kangbong Jo, Hana Park
Pusan National University, South Korea
427A
Synergetic stress of acids and ammonia on the thermophilic methanogenesis of
organics
Fan Lu*, Jiaqi Ji, Yucheng Lin, Liping Hao, Jianglin Cao, Liming Shao, Pinjing He
Tongji University / College of Environmental Science & Engineering, China
428A
Distant electric coupling between nitrate reduction and sulphide oxidation in marine
sediment
1
1
1
2
Ugo Marzocchi* , Niels Peter Revsbech , Lars Peter Nielsen , Nils Risgaard-Petersen
1
Section for Microbiology, Department of Bioscience, Aarhus University, 8000 Aarhus C,
2
Denmark, Center for Geomicrobiology, Department of Bioscience, Aarhus University, 8000
Aarhus C, Denmark
429A
Redox responsive regulation of microbial metabolism activity in iron reducing bacteria,
Shewanella
1
2
3
3
1
Shoichi Matsuda* , Huan Liu , Souichiro Kato , Shuji Nakanishi , Kazuhito Hashimoto
1
2
3
The University of Tokyo, Japan, ERATO/JST, China, ERATO/JST, Japan
430A
Metagenomic analysis of electroactive biofilms responsible for electricity production in
microbial fuel cells
1
1
1
2
Jean-Michel Monier* , Sebastien Cecillon , Emmanuel Prestat , Brian Dill , Nathan
2
3
Verberkmoes , Timothy Vogel
1
2
3
CNRS - Ecole Centrale de Lyon, France, ORNL, USA, Université Claude Bernard
Lyon, France
430B
Genome-scale modeling of metabolic interactions and interspecies electron transfer in
syntrophic consortia
1
1
1
2
2
Harish Nagarajan* , Mallory Embree , Adam Feist , Amelia Rotaru , Pravin Shrestha , Derek
2
1
Lovley , Karsten Zengler
1
2
University of California San Diego, United States, University of Massachusetts
Amherst, United States
431A
Cytochrome-associated flavin molecules mediate extracellular electron transfer
process
Akihiro Okamoto*, Ryuhei Nakamura, Kazuhito Hashimoto
Tokyo University of Pharmacy and Life Sciences, Japan
432A
Transcriptomic and genetic analysis of direct interspecies electron transfer (DIET)
Pravin Shrestha*, Amelia-Elena Rotaru, Zarath M. Summers, Fanghua Liu, Toshi Ueki, Derek
R. Lovley
University of Massachusetts, United States
433A
Microbial nitrate reduction by iron sulfide in anoxic Danish aquifer, peatland and
brackish water sediments
1
2
3
2
Sarka Vaclavkova* , Ole Stig Jacobsen , Christian Juncher Jørgensen , Jens Aamand , Bo
4
Elberling
1
Department of Geography and Geology, University of Copenhagen/ Geological Survey of
2
Denmark and Greenland, Denmark, Geological Survey of Denmark and Greenland,
3
Denmark, University of Copenhagen/Department of Geography and Geology, Denmark,
4
University of Copenhagen/ Department of Geography and Geology, Denmark
189
PS30 – Syntrophy and Electron Flow in Microbial Communities
Thursday 23 August
434A
Do denitrifiers on biocathodes act as a syntrophic community?
1
2
3
3
Ariadna Vilar-Sanz* , Sebastià Puig , Arantzazu García-Lledó , Rosalia Trias , M. Dolors
2
2
3
Balaguer , Jesús Colprim , Lluis Bañeras
1
2
Universitat de Girona, Spain, Laboratory of Chemical and Environmental Engineering
3
(LEQUIA-UdG), University of Girona, Spain, Institute of Aquatic Ecology, University of
Girona, Spain
435A
Syntrophic interactions drive the hydrogen production from glucose at low temperature
in microbial electrolysis cells
Defeng Xing*, Lu Lu, Nanqi Ren
Harbin Institute of Technology, China
PS31 – ESF - EuroEEFG Session; "Understanding the functioning of microbes and microbial
communities in their natural habitat: are we shedding light in the black box?"
200A
Influence of (in)organic additions to the function and diversity of prokaryotes in the
subtropical North Atlantic Oxygen Minimum Zone
1
2
2
2
Federico Baltar* , Thomas Reinthaler , Itziar Lekunberri , Gerhard J. Herndl , Jarone
1
Pinhassi
1
2
Linnaeus University, Sweden, University of Vienna, Austria
201A
Microbial minorities modulate methane consumption through niche partitioning
1
1
1
1
2
Paul Bodelier* , Marion Meima-Franke , Kees Hordijk , Anne Steenbergh , Mariet Hefting ,
3
4
4
Levente Bodrossy , Martin Von Bergen , Jana Seifert
1
2
Netherlands Institute of Ecology (NIOO-KNAW), Netherlands, University of Utrecht,
3
4
Netherlands, CSIRO Marine and Atmospheric Research, Australia, UFZ- Helmholtz-Centre
for Environmental Research, Germany
202A
Ubiquity by diversification: Ecological radiation in the species-like freshwater taxon
Polynucleobacter necessarius (Betaproteobacteria)
1
2
2
1
Maria Gadermaier* , Jan Jezbera , Jitka Jezberova , Martin Hahn
1
2
Austrian Academy of Sciences, Institute for Limnology, Austria, Biology Centre AS CR,
Institute of Hydrobiology, Czech Republic
203A
Seasonality and environmental control of freshwater SAR11 (LD12) in a temperate lake
(Lake Erken)
1
2
2
Friederike Heinrich* , Alexander Eiler , Stefan Bertilsson
1
2
Uppsala University, Sweden, Uppsala Univeristy, Sweden
204A
Structure and field-scale activity of methane-oxidizing bacterial communities in a
landfill-cover soil
Ruth Henneberger*, Eleonora Chiri, Martin H. Schroth
ETH Zürich, Switzerland
205A
Trait-based approaches in microbial ecology: a case study on methane oxidizing
bacteria testing the phylogenetic signal of functional traits
1
2
1
Sascha Krause* , Peter van Bodegom , Paul L.E. Bodelier
1
2
Netherlands Institute of Ecology, Netherlands, VU University, Netherlands
206A
Gene expression and diversity of methane oxidizing Proteobacteria in a Sub-Arctic
palsa peatland
1
2
2
1
Susanne Liebner* , Claudia Lueke , Peter Frenzel , Mette M Svenning
1
2
University of Tromsø, Norway, Max Planck Institute for Terrestrial Microbiology, Germany
190
PS31 – ESF EuroEEFG Session
Thursday 23 August
207A
Biogeography of aerobic methanotrophs in wetland rice fields
1
2
3
1
Claudia Lüke* , Adrian Ho , Sascha Krause , Peter Frenzel
1
2
3
MPI for terrestrial Microbiology, Germany, Ghent University, Belgium, NIOOKNAW, Netherlands
208A
Flow-sorting of uncultivable ultramicrobacteria according to their taxonomic affiliation
Stefan Neuenschwander*, Thomas Posch, Jakob Pernthaler, Michaela M Salcher
Limnological Station, University of Zurich, Switzerland
209A
Assessing protistan grazing on marine prokaryotes in the mesopelagic realm of the
Mediterranean Sea
1
1
2
2
2
Maria Pachiadaki* , Andreas Oikonomou , William Orsi , Virginia Edgcomb , Craig Taylor ,
3
1
Michail Yakimov , Thorsten Stoeck
1
2
3
University of Kaiserslautern, Germany, Woods Hole Oceanographic Institution, USA, Woods
Hole OceanogrCNR-Institute for coastal marine environment, Messinaaphic Institution, Italy
210A
Effect of energy flow on the susceptibility of aerobic methanotrophic communities to
disturbance
Andreas Reim*, Peter Frenzel
MPI for Terrestrial Microbiology, Germany
211A
Protein-SIP to elucidate bacterial key players in wetland ecosystems
1
1
2
Jana Seifert* , Martin von Bergen , Paul Bodelier
1
2
UFZ-Helmholtz Center for Environmental Research GmbH, Germany, Netherlands Institute
of Ecology (NIOO-KNAW), Netherlands
212A
Bacterial population in the Pelagic zone
1
2
2
1
Abhishek Srivastava* , Sarahi L. Garcia , Falk Warnecke , Hans-Peter Grossart
1
Leibniz-Institute for Freshwater Ecology and Inland Fisheries, Department 3: Limnology of
2
Stratified Lakes, Stechlin, Germany, Jena School for Microbial Communication (JSMC) and
Microbial Ecology Group at Friedrich Schiller University Jena, Germany
213A
A dark and winding road: from microbial sequences to soil biogeochemical fluxes in a
global change experiment
1
1
2
3
James T. Weedon* , Rien Aerts , George A. Kowalchuk , Wilfred F.M. Röling , Peter M. van
1
Bodegom
1
2
Department of Ecological Science, VU University Amsterdam, Netherlands, Department of
3
Microbial Ecology, Netherlands Institute of Ecology, Wageningen, Netherlands, Department
of Molecular Cell Physiology, VU University Amsterdam, Netherlands
191
PS31 – ESF EuroEEFG Session