supplementary figures - QIMR Genetic Epidemiology

Transcription

supplementary figures - QIMR Genetic Epidemiology
SUPPLEMENTARY FIGURES
Supplementary Figure 1. Age-associated genes in discovery and replication samples.
(1A) Manhattan mirror plot of the whole blood expression-age discovery meta-analysis. Each dot represents a
gene; the x-axis gives the position of the gene on the genome (chr 1 – chrY), and the y-axis represents the
direction of the effect (-/+) and the p-value of the association (-logP). (1B) The scatterplot illustrating the
correlation between the discovery z-scores and the replication z-scores of the 1,497 age-associated genes.
1
Supplementary Figure 2. Venn diagram for overlapping genes between whole blood and brain tissue.
Venn diagram for the age-associated genes identified in the analyses for whole blood, cerebellum, and frontal
cortex. 88 genes were differentially expressed with age across all three tissues.
2
Supplementary Figure 3. Match quality of random genes selected for methylation-expression enrichment
analysis.
(3A) Distribution of gene length of 1,497 age-associated genes and 1,497 random genes (matched on gene length
and the log of mean expression as described in Methods). (3B) Distribution of log mean expression of 1,497 ageassociated genes and 1,497 random genes. (3C) Distribution of mean expression of 1,497 age-associated genes
and 1,497 random genes. (3D) Distribution of number of proximal CpG sites (within 250kb) of 1,497 ageassociated genes and 1,497 random genes.
3
Supplementary Figure 4. Quantile-Quantile (QQ) plots of the 1,497 age-associated genes versus 1,497
random genes, separately by cohort.
A.
B.
C.
4
D.
E.
F.
5
G.
Q-Q plots of the observed P values (-log10P) for the methylation~age associations (left panels) and the
methylation~expression associations (right panels). The plots in black show P values from the 1,497 significant
age-associated genes, whereas the plots in red and blue show P values for 1,497 random genes. Plots A-G
represent the results for the separate cohorts with methylation data: (4A) EGCUT, (4B) INCHIANTI, (4C)
BSGS, (4D) GTP, (4E) KORA, (4F) RS, and (4G) GARP. These plots were the basis for Figure 2, which shows
the results of the meta-analysis across all cohorts.
6
Supplementary Figure 5. Quantile-Quantile (QQ) plots of the 1,497 age-associated genes versus 1,497
random genes, separately by genomic region.
A.
B.
C.
7
D.
E.
F.
8
G.
H.
I.
9
J.
Q-Q plots of the observed P values (-log10P) for the methylation~age associations (left panels) and the
methylation~expression associations (right panels). The plots in black show P values from the 1,497 significant
age-associated genes, whereas the plots in red and blue show P values for 1,497 random genes. Plots A-G
represent the results for different genomic regions: (5A) CpG-islands, (5B) Off-island, (5C) Shores, (5D)
Shelves, (5E) Promoters, (5F) Non-promoters, (5G) Enhancers, (5H) Non-enhancers, (5I) Insulators, and (5J)
Non-insulators.
10
Supplementary Figure 6. Odds ratios for enrichment of CpG sites with significant Sobel test p-values for the different genomic regions.
Each odds ratio is based on comparison of CpG sites within 250kb of the 1,497 age-associated genes with significant Sobel test p-values (N=8,234) vs. other CpG sites within 250kb
of the 1,497 age-associated genes (N=191,832). Vertical bars represent the 95% confidence interval for each odds ratio. Strong enhancers, weak enhancers, insulators, and off island
regions were enriched for CpG sites with significant Sobel test p-values.
11
Supplementary Figure 7. Comparison of the transcriptomic and epigenetic age prediction methods.
A.
(7A) The top figure represents the correlation between transcriptomic age (y-axis) and chronological age (xaxis). The figures in the middle show the correlation between epigenetic age (y-axis: left = Horvath, right =
Hannum) and chronological age (x-axis). The figures at the bottom explain the correlation between the
transcriptomic predictor (x-axis) and the epigenetic age (y-axis: left = Horvath, right = Hannum) – results based
on a selection of 671 Rotterdam Study samples having both gene expression & DNA methylation data available.
12
B.
(7B) The top figure represents the correlation between transcriptomic age (y-axis) and chronological age (xaxis). The figures in the middle show the correlation between epigenetic age (y-axis: left = Horvath, right =
Hannum) and chronological age (x-axis). The figures at the bottom explain the correlation between the
transcriptomic predictor (x-axis) and the epigenetic age (y-axis: left = Horvath, right = Hannum) – results based
on a selection of 725 KORA samples having both gene expression & DNA methylation data available.
13
Supplementary Figure 8. Overview of the study design.
Affymetrix probe IDs and Illumina probe IDs have been combined to be able to run one meta-analysis on 11,908
overlapping genes. 2,228 genes were significantly associated with age in the discovery meta-analysis (p<4.2E-6),
and 1,497 genes have been replicated in the replication meta-analysis (p<2.2E-5). The 1,497 replicated ageassociated genes have been checked in other tissues and ethnicities (p<0.05).
14
Supplementary Figure 9. Age distributions of the discovery (A-F), replication (G-N), and generalization
cohorts (O-V).
15
(9A) KORA, (9B) INCHIANTI, (9C) SHIP-TREND, (9D) EGCUT, (9E) RS, (9F) FHS-OFFSPRING(GEN2:
EXAM 8), (9G) BSGS, (9H) DILGOM, (9I) FEHRMANN, (9J) FHS-GEN3 (GEN3: EXAM 2), (9K) GTP,
(9L) HVH (v3), (9M) HVH (v4), (9N) NIDDK/PHOENIX, (9O) EGCUT (CD4+ and CD8+ cells), (9P) GARP
(PBMCs), (9Q) GENOA (LCLs), (9R) BOSTON COHORT (CD4+ and CD14+ cells), (9S) PBMC-MS
(PBMCs), (9T) MESA (monocytes), (9U) NABEC-UKBEC (brain cells), (9V) SAFS (lymphocytes).
16
Supplementary Figure 10. Calibration of the parameter lambda (λ) for the approximate ridge regression
analysis in the BSGS cohort.
Lambda (λ) is the shrinkage parameter that is used to estimate effect sizes in the ridge regression (see methods).
We re-ran the meta-analysis excluding the BSGS cohort. We performed the approximate ridge regression
analysis with a range of lambda values, and calculated the correlation between the predictor and the actual age in
BSGS (shown on y-axis). Shown on x-axis is lambda / n with n being the sample size of the meta-analysis
(excluding BSGS). The maximum prediction accuracy is achieved at lambda = 6.07 * n with n being the sample
size.
17
SUPPLEMENTARY TABLES
Supplementary Table 1. The number of age-associated genes across different ancestries.
Caucasian
(meta-analysis)
15,266
Native American
(NIDDK/Phoenix)
1,457
Hispanic
(SAFHS)
1,244
African American
(GTP)
359
1,497
1,424
595
1,481
100.0%
95.1%
39.7%
98.9%
# expressed genes - same direction
1,326
562
1,219
% SAME DIRECTION
93.1%
94.5%
82.3%
# expressed genes - same direction & p<0.05
1,005
440
392
% GENERALIZED
70.6%
73.9%
26.5%
# samples
# expressed genes
% EXPRESSED
Supplementary Table 2: The number of age-associated genes across different tissue types.
Whole blood Cerebellum Frontal cortex
CD4+
CD8+
CD14+
LCLs
Lymphocytes
PBMCs
# samples
15,266
394
394
515
299
567
869
1244
362
# expressed genes
1,497
860
882
1,470
1,203
1,473
1,315
595
1,497
100.0%
57.4%
58.9%
98.2% 80.4%
98.4%
87.8%
39.7%
100.0%
414
438
1168
1100
1020
596
562
1126
48.1%
49.7%
79.5% 91.4%
69.2%
45.3%
94.5%
75.2%
163
229
400
220
440
328
19.0%
26.0%
27.2%
16.7%
73.9%
21.9%
% EXPRESSED
# expressed genes - same direction
% SAME DIRECTION
# expressed genes - same direction & p<0.05
% GENERALIZED
440
663
29.9% 55.1%
18
Supplementary Table 3: A matrix of shared age-associated genes across different tissues.
Tissue
(# age-associated genes)
Whole blood
(1,497 genes)
Cerebellum
(860 genes)
Frontal cortex
(882 genes)
CD4+
(1,470 genes)
CD8+
(1,203 genes)
CD14+
(1,473 genes)
LCLs
(1,315 genes)
Lymphocytes
(595 genes)
PBMCs
(1,497 genes)
Whole blood
(1,497 genes)
1,497
163
229
440
663
400
220
440
328
Cerebellum
(860 genes)
163
163
88
53
79
63
18
43
26
Frontal cortex
(882 genes)
229
88
229
76
107
82
35
69
40
CD4+
(1,470 genes)
440
53
76
440
283
132
63
165
131
CD8+
(1,203 genes)
663
79
107
283
663
180
111
238
169
CD14+
(1,473 genes)
400
63
82
132
180
400
55
137
73
LCLs
(1,315 genes)
220
18
35
63
111
55
220
64
52
Lymphocytes
(595 genes)
440
43
69
165
238
137
64
440
111
PBMCs
(1,497 genes)
328
26
40
131
169
73
52
111
328
19
Supplementary Table 4. 34 genes encoding ribosomal subunits were significantly associated with age: 33 were negatively associated with age.
UNIQUEID
48072
13742
9389
40921
60831
45616
17817
67967
45323
42546
62881
19552
32696
55317
46193
34217
48839
17484
66008
52719
4260
45816
57181
45497
14935
18988
68466
48699
11427
58212
65095
63762
62334
49929
RANK
38
317
356
374
387
414
432
451
453
478
596
610
615
704
711
730
791
887
910
973
1071
1098
1159
1167
1255
1257
1275
1303
1338
1404
1413
1458
1460
1472
GENID
RPL22
RPS6
RPS4X
RPL18
RPL13
RPS23
RPL8
RPS13
RPL5
RPLP0
RPSAP58
RPS2
RPL13P5
RPL19
RPP40
RPS16
RPL4
RPL36
RPS20
RPS14
RPL13AP3
RPL28
RPS29
RPL17
RPSA
RPS6KB1
RPP21
RPL11
RPL27A
RPL30
RPL35
RPS6KA1
RPL23AP64
RPS18
WEIGHT
15266
15266
15266
15266
15266
14385
14385
15266
15266
15266
15266
15266
15266
15266
15266
14385
15266
15266
15266
15266
15266
15266
15266
15266
12620
15266
15266
15266
15266
15266
15266
15266
15266
15266
ZSCORE
-20.987
-12.692
-12.083
-11.924
-11.827
-11.561
-11.474
-11.319
-11.302
-11.116
-10.241
-10.167
-10.136
-9.742
-9.709
-9.618
-9.392
-9.014
-8.921
-8.643
-8.28
-8.187
-8.001
-7.955
-7.666
-7.647
-7.558
-7.47
-7.34
-7.113
-7.053
6.798
-6.773
-6.628
DIRECTION
+
-
P-VALUE
8.61E-98
6.57E-37
1.29E-33
8.87E-33
2.85E-32
6.49E-31
1.78E-30
1.06E-29
1.28E-29
1.04E-28
1.30E-24
2.77E-24
3.81E-24
2.00E-22
2.77E-22
6.72E-22
5.87E-21
1.99E-19
4.60E-19
5.49E-18
1.23E-16
2.67E-16
1.24E-15
1.79E-15
1.77E-14
2.06E-14
4.08E-14
8.03E-14
2.14E-13
1.14E-12
1.75E-12
1.06E-11
1.26E-11
3.41E-11
20
Supplementary Table 5. 10 genes encoding mitochondrial ribosomal genes were significantly associated with age: all were negatively associated with age.
UNIQUEID
54318
34287
44427
36113
13521
6683
35886
14726
22151
36300
RANK
480
641
794
820
840
866
894
1025
1128
1492
GENID
MRPL45
MRPS27
MRPL3
MRPL24
MRPS26
MRPS31
MRPS18B
MRPS33
MRPS9
MRPL35
WEIGHT
15266
15266
14385
15266
15266
15266
15266
15266
15266
15266
ZSCORE
-11.083
-9.994
-9.38
-9.285
-9.196
-9.057
-8.984
-8.447
-8.098
-6.419
DIRECTION
-
P-VALUE
1.52E-28
1.62E-23
6.61E-21
1.62E-20
3.71E-20
1.34E-19
2.61E-19
2.99E-17
5.58E-16
1.37E-10
21
Supplementary Table 6. The number of whole blood functional cluster genes significantly associated with age across the different tissues.
Functional cluster
(# genes expressed)
+1
Whole blood
(278 genes)
77
Cerebellum
(131 genes)
4
Frontal cortex
(136 genes)
6
CD4+
(275 genes)
40
CD8+
(228 genes)
42
CD14+
(277 genes)
21
LCLs
(252 genes)
10
Lymphocytes
(129 genes)
32
PBMCs
(278 genes)
10
+2
9
2
6
4
4
5
5
4
1
+3
8
0
1
1
2
2
2
2
0
+4
6
2
3
2
4
2
0
1
0
-1.1
50
5
9
6
19
28
1
23
19
-1.2
37
7
5
8
18
23
1
14
11
-1.3
22
3
2
6
14
3
1
6
7
-2
57
1
1
11
23
10
17
17
17
-3
12
0
0
1
8
9
4
1
0
AVG # of SIGN functional clusters genes
278
24
33
79
134
103
41
100
65
Supplementary Table 7. The percentage of whole blood functional cluster genes significantly associated with age across the different tissues.
Functional cluster
(# genes expressed)
+1
Whole blood
(278 genes)
100.0%
Cerebellum
(131 genes)
5.2%
Frontal cortex
(136 genes)
7.8%
CD4+
(275 genes)
51.9%
CD8+
(228 genes)
54.5%
CD14+
(277 genes)
27.3%
LCLs
(252 genes)
13.0%
Lymphocytes
(129 genes)
41.6%
PBMCs
(278 genes)
13.0%
+2
100.0%
22.2%
66.7%
44.4%
44.4%
55.6%
55.6%
44.4%
11.1%
+3
100.0%
0.0%
12.5%
12.5%
25.0%
25.0%
25.0%
25.0%
0.0%
+4
100.0%
33.3%
50.0%
33.3%
66.7%
33.3%
0.0%
16.7%
0.0%
-1.1
100.0%
10.0%
18.0%
12.0%
38.0%
56.0%
2.0%
46.0%
38.0%
-1.2
100.0%
18.9%
13.5%
21.6%
48.6%
62.2%
2.7%
37.8%
29.7%
-1.3
100.0%
13.6%
9.1%
27.3%
63.6%
13.6%
4.5%
27.3%
31.8%
-2
100.0%
1.8%
1.8%
19.3%
40.4%
17.5%
29.8%
29.8%
29.8%
-3
100.0%
0.0%
0.0%
8.3%
66.7%
75.0%
33.3%
8.3%
0.0%
AVG % of SIGN functional clusters genes
100.0%
11.7%
19.9%
25.6%
49.8%
40.6%
18.4%
30.8%
17.1%
22
Supplementary Table 8. The candidate genes carried forward to replication.
GENEID
Lookup
GENEID
LRRN3
CCR7
CD27
IGJ
LRRN3
CCR7
CD27
IGJ
LDH2
LDHB
VEGFB
ATM
FOXO1
VEGFB
ATM
FOXO1
IL7R
CAMK4
SREBF1
CD28
IL7R
CAMK4
SREBF1
CD28
LMNA
LMNA
ICSBP1
IRF8
CD70
MRPS26
MRPL45
CD70
MRPS26
MRPL45
FCGR1
FCGR1A
EIF4G3
MRPS18B
WRN
MRPS27
MRPL24
MRPS9
MRPL3
MRPS31
STAT3
MRPS33
ANXA5
NFKB1
RPS6KB1
S6K
MRPL35
FOXO3A
MRPS6
LYZ
CTSZ
MRPL46
ADARB1
GRN
MRPL36
CETP
EIF4G3
MRPS18B
WRN
MRPS27
MRPL24
MRPS9
MRPL3
MRPS31
STAT3
MRPS33
ANXA5
NFKB1
RPS6KB1
RPS6KB1
MRPL35
FOXO3
MRPS6
LYZ
CTSZ
MRPL46
ADARB1
GRN
MRPL36
CETP
SLC25A17
SLC25A17
CDKN2B
CDKN2B
Reason
Markers of naïve/differentiated cells
Markers of naïve/differentiated cells
Markers of naïve/differentiated cells
Multi-tissue, multi-species candidate
Downregulated in mice and humans
w/ageing in multi-tissue analyses
MTOR/FOXO pathways
Key DNA repair gene
MTOR/FOXO pathways
Age and longevity expression
association
Longevity genetics candidate
MTOR/FOXO pathways
Markers of naïve/differentiated cells
Hutchinson-Gilford Progeria
syndrome
Upregulated in mice and humans
w/ageing in multi-tissue analyses
Markers of naïve/differentiated cells
Mitochondrial ageing results
Mitochondrial ageing results
Upregulated in mice and humans
w/ageing in multi-tissue analyses
MTOR/FOXO pathways
Mitochondrial ageing results
Werner syndrome
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
MTOR/FOXO pathways
Mitochondrial ageing results
Multi-tissue, multi-species candidate
MTOR/FOXO pathways
MTOR/FOXO pathways
MTOR/FOXO pathways
Mitochondrial ageing results
MTOR/FOXO pathways
Mitochondrial ageing results
Multi-tissue, multi-species candidate
Multi-tissue, multi-species candidate
Mitochondrial ageing results
Longevity genetics candidate
Multi-tissue, multi-species candidate
Mitochondrial ageing results
Longevity genetics candidate
Downregulated in mice and humans
w/ageing in multi-tissue analyses
Longevity candidate gene
exp.
dir
Citation(s)
RANK
Dir
disc-p
repl-p
+
Chou et al. 2013
Chou et al. 2013
Chou et al. 2013
de Magalhaes/Church 2009
2
5
9
68
-
2.03E-186
3.59E-99
1.07E-69
6.52E-19
7.81E-247
1.48E-111
5.13E-95
1.08E-65
-
Zahn et al. AGEMAP
28
-
4.33E-55
2.42E-57
-
Harries et al. 2012
Park et al. 2013
Harries et al. 2012
218
86
108
-
8.85E-18
1.25E-42
3.06E-36
6.51E-29
1.41E-28
3.43E-28
-
Passtoors et al. 2012
60
-
7.07E-63
2.85E-24
-
Newman & Murabito 2013
Harries et al. 2012
Chou et al. 2013
96
573
127
-
1.98E-47
2.80E-07
1.69E-45
2.15E-22
2.45E-21
6.84E-19
+
Luo et al. 2013
382
+
8.88E-16
2.40E-18
+
Zahn et al. AGEMAP
319
-
2.15E-20
4.87E-18
-
Chou et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
297
840
480
+
-
3.63E-23
8.64E-07
7.13E-15
3.37E-17
1.12E-15
2.94E-15
+
Zahn et al. AGEMAP
383
+
2.47E-19
6.19E-15
+
+
+
?
+
+
Harries et al. 2012
Houtkooper et al. 2013
Yu et al. 1996
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Harries et al. 2012
Houtkooper et al. 2013
de Magalhaes/Church
Harries et al. 2012
Harries et al. 2012
Harries et al. 2012
Houtkooper et al. 2013
Harries et al. 2012
Houtkooper et al. 2013
de Magalhaes/Church 2009
de Magalhaes/Church 2009
Houtkooper et al. 2013
Newman & Murabito 2013
de Magalhaes/Church 2009
Houtkooper et al. 2013
Newman & Murabito 2013
485
894
544
641
820
1128
794
866
1219
1025
987
940
1257
1257
1492
na
na
na
na
na
na
na
na
na
+
+
+
+
+
+
+
+
6.59E-16
9.41E-08
2.32E-16
2.38E-13
6.65E-11
1.26E-07
1.41E-13
1.57E-12
2.95E-08
1.93E-12
5.88E-14
4.66E-16
2.60E-10
2.60E-10
1.44E-06
4.41E-09
1.12E-06
1.88E-08
1.36E-06
2.70E-06
4.67E-08
3.48E-11
1.72E-06
1.84E-11
3.60E-14
2.43E-13
4.66E-12
8.81E-12
3.98E-11
7.75E-10
2.34E-09
7.63E-09
4.28E-08
7.00E-07
2.38E-06
4.82E-06
5.62E-06
5.62E-06
1.91E-05
9.99E-05
1.33E-04
5.54E-04
2.18E-03
2.26E-03
2.83E-02
3.10E-02
4.06E-02
1.06E-01
-
Zahn et al. AGEMAP
na
-
9.69E-07
3.42E-01
+
Baker et al. 2008
na
+
7.89E-07
7.45E-01
23
Supplementary Table 9: The candidate genes not carried forward to replication.
GENEID
Lookup
GENEID
ADARB2
ADIPOQ
AKT1
ANXA3
ADARB2
ADIPOQ
AKT1
ANXA3
ARPP19
ARPP19
ASF1A
ATP5G3
ASF1A
ATP5G3
ATP5J
ATP5J
BANF1
BLM
BRCA1
C1QA
C3
CAT
CETP
BANF1
BLM
BRCA1
C1QA
C3
CAT
CETP
CPSF5
NUDT21
CTSH
CTSS
CTSH
CTSS
CXCR4
CXCR4
EIF4E
EIF4EBP1
ERCC8
FOXO4
GIP
HIF1A
IGF1R
INSR
LKB1
EIF4E
EIF4EBP1
ERCC8
FOXO4
C1QTNF1
HIF1A
IGF1R
INSR
STK11
MDH1
MDH1
MGST1
MRE11
MGST1
MRE11A
MRE11A
MRE11A
MRP63
MRPL1
MRPL10
MRPL11
MRPL12
MRPL13
MRPL14
MRPL15
MRPL16
MRPL17
MRPL18
MRPL19
MRPL2
MRPL20
MRP63
MRPL1
MRPL10
MRPL11
MRPL12
MRPL13
MRPL14
MRPL15
MRPL16
MRPL17
MRPL18
MRPL19
MRPL2
MRPL20
Reason
Citation(s)
RANK
Longevity genetics candidate
Longevity genetics or biology candidate
Longevity genetics candidate
Multi-tissue, multi-species candidate
Downregulated in mice and humans w/ageing in multitissue analyses
Age and longevity expression association
Multi-tissue, multi-species candidate
Downregulated in mice and humans w/ageing in multitissue analyses
Nestor-Guillermo Progeria syndrome
DNA repair genes
DNA repair genes
Multi-tissue, multi-species candidate
Multi-tissue, multi-species candidate
Longevity genetics or biology candidate
Longevity genetics or biology candidate
Downregulated in mice and humans w/ageing in multitissue analyses
Multi-tissue, multi-species candidate
Multi-tissue, multi-species candidate
Upregulated in mice and humans w/ageing in multi-tissue
analyses
MTOR/FOXO pathways
MTOR/FOXO pathways
Cockayne syndrome
MTOR/FOXO pathways
Longevity candidate gene
MTOR/FOXO pathways
MTOR/FOXO pathways
MTOR/FOXO pathways
MTOR/FOXO pathways
Downregulated in mice and humans w/ageing in multitissue analyses
Multi-tissue, multi-species candidate
DNA repair genes
Downregulated in mice and humans w/ageing in multitissue analyses
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Newman & Murabito 2013
Barzilai & Gabriely 2010
Newman & Murabito 2013
de Magalhaes/Church 2009
3984
9016
5162
4022
Zahn et al. AGEMAP
10836
Passtoors et al. 2012
de Magalhaes/Church 2009
2844
9622
Zahn et al. AGEMAP
6638
Mendelian ageing disorder
Key DNA repair gene
Key DNA repair gene
de Magalhaes/Church 2009
de Magalhaes/Church 2009
Barzilai & Gabriely 2010
Barzilai & Gabriely 2010
4363
5492
6096
11600
2901
10608
1591
Zahn et al. AGEMAP
3232
de Magalhaes/Church 2009
de Magalhaes/Church 2009
2380
2308
Zahn et al. AGEMAP
6812
Harries et al. 2012
Harries et al. 2012
Mendelian ageing disorder
Harries et al. 2012
Sebastiani
Harries et al. 2012
Kenyon 2011
Harries et al. 2012
Harries et al. 2012
2644
4534
6625
5304
10428
8798
2770
6856
10505
Zahn et al. AGEMAP
4275
de Magalhaes/Church 2009
Key DNA repair gene
2724
3888
Zahn et al. AGEMAP
3888
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
8838
3705
5773
10556
4716
6335
10108
7351
7019
9959
4032
8375
4326
NA
24
MRPL21
MRPL22
MRPL23
MRPL27
MRPL28
MRPL30
MRPL32
MRPL33
MRPL34
MRPL37
MRPL38
MRPL39
MRPL4
MRPL40
MRPL41
MRPL42
MRPL42P5
MRPL43
MRPL44
MRPL47
MRPL48
MRPL49
MRPL50
MRPL51
MRPL52
MRPL53
MRPL54
MRPL55
MRPL9
MRPS10
MRPS11
MRPS12
MRPS14
MRPS15
MRPS16
MRPS17
MRPS18A
MRPS18C
MRPS2
MRPS21
MRPS22
MRPS23
MRPS24
MRPS25
MRPS28
MRPS30
MRPS34
MRPS35
MRPS36
MRPS5
MRPS7
MTOR
NBS
MRPL21
MRPL22
MRPL23
MRPL27
MRPL28
MRPL30
MRPL32
MRPL33
MRPL34
MRPL37
MRPL38
MRPL39
MRPL4
MRPL40
MRPL41
MRPL42
MRPL42P5
MRPL43
MRPL44
MRPL47
MRPL48
MRPL49
MRPL50
MRPL51
MRPL52
MRPL53
MRPL54
MRPL55
MRPL9
MRPS10
MRPS11
MRPS12
MRPS14
MRPS15
MRPS16
MRPS17
MRPS18A
MRPS18C
MRPS2
MRPS21
MRPS22
MRPS23
MRPS24
MRPS25
MRPS28
MRPS30
MRPS34
MRPS35
MRPS36
MRPS5
MRPS7
FRAP1
NBN
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
Mitochondrial ageing results
DNA repair genes
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Houtkooper et al. 2013
Kenyon
Key DNA repair gene
5971
9371
7774
10148
6173
10371
4652
9970
6884
5757
5668
2928
4356
9138
9523
4092
NA
4233
7459
7448
7343
6545
3825
7197
5007
11385
10444
3480
5619
5784
8418
9451
10388
11684
11549
2958
8305
10829
2409
3928
10766
8491
5522
2774
3085
6375
7406
2413
11533
8330
8289
7925
4173
25
NDRG1
NDUFB11
NDRG1
NDUFB11
OAT
OAT
PDK1
PI3K
PDK1
PIK3CA
PRDX6
PRDX6
PTEN
RHEB
PTEN
RHEB
RPL10
NOV
RPL37
RPL37
S100A4
S100A6
SESN3
SGK1
SIRT1
SIRT2
S100A4
S100A6
SESN3
SGK
SIRT1
SIRT2
SLC25A5
SLC25A5
SNX3
SNX3
SOD1
SOD2
TEK
TFRC
TSC1
TSC2
ULK1
UQCRFS1
UQCRQ
SOD1
SOD2
TEK
TFRC
TSC1
TSC2
ULK1
UQCRFS1
UQCRQ
MTOR/FOXO pathways
Multi-tissue, multi-species candidate
Downregulated in mice and humans w/ageing in multitissue analyses
MTOR/FOXO pathways
MTOR/FOXO pathways
Upregulated in mice and humans w/ageing in multi-tissue
analyses
MTOR/FOXO pathways
MTOR/FOXO pathways
Upregulated in mice and humans w/ageing in multi-tissue
analyses
Upregulated in mice and humans w/ageing in multi-tissue
analyses
Multi-tissue, multi-species candidate
Multi-tissue, multi-species candidate
MTOR/FOXO pathways
MTOR/FOXO pathways
Longevity genetics or biology candidate
Longevity genetics or biology candidate
Downregulated in mice and humans w/ageing in multitissue analyses
Downregulated in mice and humans w/ageing in multitissue analyses
Longevity genetics or biology candidate
Longevity genetics or biology candidate
Longevity candidate gene
Multi-tissue, multi-species candidate
MTOR/FOXO pathways
MTOR/FOXO pathways
MTOR/FOXO pathways
Multi-tissue, multi-species candidate
Multi-tissue, multi-species candidate
Harries et al. 2012
de Magalhaes/Church 2009
2646
4732
Zahn et al. AGEMAP
9865
Harries et al. 2012
Harries et al. 2012
4215
7589
Zahn et al. AGEMAP
5361
Harries et al. 2012
Harries et al. 2012
7324
10143
Zahn et al. AGEMAP
2064
Zahn et al. AGEMAP
NA
de Magalhaes/Church 2009
de Magalhaes/Church 2009
Harries et al. 2012
Harries et al. 2012
Barzilai & Gabriely 2010
Barzilai & Gabriely 2010
NA
3393
5719
3855
3309
2478
Zahn et al. AGEMAP
NA
Zahn et al. AGEMAP
10058
Barzilai & Gabriely 2010
Barzilai & Gabriely 2010
Sebastiani
de Magalhaes/Church 2009
Harries et al. 2012
Harries et al. 2012
Harries et al. 2012
de Magalhaes/Church 2009
de Magalhaes/Church 2009
4099
2262
5648
6258
5045
11259
4350
11681
5502
26
Supplementary Table 10. The mean (absolute) transcriptomic Δage per cohort, plus the number of samples, females, and smokers.
# samples
# females (%)
# smokers (%)
Mean Δage
(years)
RS
829
446 (53.8)
226 (27.3)
0.00
6.06
InCHIANTI
681
370 (54.3)
73 (10.7)
0.00
11.21
NIDDK/PHOENIX
1,457
717 (49.2)
NA
0.00
9.05
FHS-GEN2 (OFFSPRING)
2,446
1,343 (54.9)
205 (8.4)
0.00
7.31
SHIP-TREND
970
546 (56.3)
214 (22.1)
0.00
8.63
KORA
989
493 (49.9)
66 (6.7)
0.00
4.84
EGCUT
962
482 (50.1)
243 (25.3)
0.00
9.12
DILGOM
513
276 (53.8)
100 (19.5)
0.00
7.15
8,847
4,673 (52.8)
1,127 (12.7)
0.00
7.84
COHORT
SUM
Mean abs
Δage (years)
27
Supplementary Table 11 – part 1. Associations of transcriptomic Δage with 12 ageing phenotypes in the cohorts RS, INCHIANTI, NIDDK?PHOENIX, and FHS-GEN2 adjusted for chronological age.
Phenotype of Interest
Sex: 0 = male, 1 = female
Systolic blood pressure: mmHg
Diastolic blood pressure: mmHg
Total cholesterol levels: mmol/L
HDL cholesterol levels: mmol/L
Fasting glucose levels: mmol/L
Body Mass Index: kg/m2
Waist Hip Ratio
Hand grip strength: kg
Renal function
Mini Mental State Exam Score
Current smoking: 0 = no, 1 = yes
Effect
-0.0020
0.5424
0.3526
0.0017
0.0012
0.0165
0.0706
0.0008
0.0135
0.0377
-0.0064
0.0057
RS
SE
0.0026
0.1221
0.0706
0.0058
0.0024
0.0057
0.0243
0.0004
0.0569
0.0842
0.0099
0.0023
P
4.32E-01
1.06E-05
7.77E-07
7.68E-01
6.02E-01
3.96E-03
3.72E-03
5.48E-02
8.12E-01
6.55E-01
5.23E-01
1.37E-02
n
829
572
572
691
691
826
829
819
556
827
817
829
Effect
-0.0019
0.1064
0.0338
0.4370
0.1021
0.0058
0.0104
0.0001
0.0295
0.0925
-0.0183
-0.0008
INCHIANTI
SE
P
0.0015
2.12E-01
0.0585
6.96E-02
0.0329
3.05E-01
0.1208
3.20E-04
0.0465
2.85E-02
0.0041
1.52E-01
0.0132
4.31E-01
0.0002
7.57E-01
0.0312
3.44E-01
0.0614
1.32E-01
0.0147
2.12E-01
0.0009
4.13E-01
n
681
679
679
681
681
681
681
591
673
674
675
681
Effect
0.0007
0.2110
0.1330
0.0065
0.0050
0.0314
0.0081
na
na
0.0751
na
na
NIDDK/PHOENIX
SE
P
0.0013
6.07E-01
0.0377
2.59E-08
0.0259
3.19E-07
0.0030
2.71E-02
0.0010
1.73E-06
0.0081
1.05E-04
0.0190
6.72E-01
na
na
na
na
0.0453
9.80E-02
na
na
na
na
n
1,457
1,457
1,457
1,447
1,447
1,430
1,450
na
na
1,445
na
na
FHS-GEN2 (OFFSPRING)
Effect
SE
P
-0.0049
0.0013
1.14E-04
0.2267
0.042
8.48E-08
0.0706
0.025
4.84E-03
0.3251
0.095
6.21E-04
0.1336
0.046
3.58E-03
0.1941
0.061
1.51E-03
0.0462
0.014
8.05E-04
na
na
na
-0.0701
0.028
1.36E-02
-0.0424
0.045
3.47E-01
na
na
na
0.0033
0.0007
3.19E-06
n
2,440
2,438
2,435
2,440
2,439
2,439
2,440
na
2,422
2,439
na
2,440
Supplementary Table 11 – part 2. Associations of transcriptomic Δage with 12 ageing phenotypes in the cohorts SHIP-TREND, KORA, EGCUT, and DILGOM - adjusted
for chronological age.
Phenotype of Interest
Sex: 0 = male, 1 = female
Systolic bloodpressure: mmHg
Diastolic bloodpressure: mmHg
Total cholesterol levels: mmol/L
HDL cholesterol levels: mmol/L
Fasting glucose levels: mmol/L
Body Mass Index: kg/m2
Waist Hip Ratio
Hand grip strength: kg
Renal function
Mini Mental State Exam Score
Current smoking: 0 = no, 1 = yes
Effect
-0.0001
0.2131
0.1316
0.0101
0.0016
0.0043
0.0335
0.0003
na
0.0573
na
0.0117
SHIP-TREND
SE
P
0.0016
9.63E-01
0.0514
3.62E-05
0.0313
2.90E-05
0.0033
2.23E-03
0.0012
1.73E-01
0.0019
2.30E-02
0.0143
1.89E-02
0.0003
2.44E-01
na
na
0.0616
3.52E-01
na
na
0.0012
2.14E-20
n
970
969
969
970
970
970
970
970
na
970
na
970
Effect
0.0007
0.2752
0.0187
-0.0031
-0.0018
0.4725
0.0804
0.0011
na
na
na
0.0025
KORA
SE
P
0.003
8.33E-01
0.127
3.03E-02
0.062
7.64E-01
0.007
6.38E-01
0.002
4.28E-01
0.149
1.56E-03
0.029
5.18E-03
0.001
2.52E-02
na
na
na
na
na
na
0.002
1.07E-01
n
984
983
983
984
984
984
984
984
na
na
na
984
Effect
-0.0021
0.0450
0.0404
0.0058
0.0006
Na
0.0031
0.0003
Na
-0.0382
Na
-0.0058
EGCUT
SE
P
0.001
1.55E-01
0.048
3.47E-01
0.031
1.89E-01
0.003
6.77E-02
0.001
6.77E-01
na
na
0.013
8.19E-01
0.000
2.65E-01
na
na
0.052
4.65E-01
na
na
0.001
7.33E-06
n
962
962
962
962
962
na
962
962
na
962
na
962
Effect
0.0006
0.2227
0.1236
0.0028
-0.0009
na
0.0530
0.0006
na
na
na
-0.0005
DILGOM
SE
P
0.0025
8.05E-01
0.0884
1.21E-02
0.0504
1.46E-02
0.0048
5.60E-01
0.0019
6.22E-01
na
na
0.0228
2.06E-02
0.0004
1.63E-01
na
na
na
na
na
na
0.0020
7.86E-01
n
513
511
511
513
513
na
513
511
na
na
na
513
We tested whether the transcriptomic delta age was associated with twelve different phenotypes known to be associated with chronological age. Gene expression levels were
adjusted for plate ID, RNA quality score, fasting state, sex, smoking status, and cell counts. Results are presented per cohort, and these results were the basis for Table 2,
which shows the results of the meta-analysis across all cohorts.
28
Supplementary Table 12 – part 1. Associations of transcriptomic Δage with 12 ageing phenotypes in the cohorts RS, INCHIANTI, NIDDK/PHOENIX, and FHS-GEN2 adjusted for chronological age and BMI.
Phenotype of Interest
Sex: 0 = male, 1 = female
Systolic bloodpressure: mmHg
Diastolic bloodpressure: mmHg
Total cholesterol levels: mmol/L
HDL cholesterol levels: mmol/L
Fasting glucose levels: mmol/L
Body Mass Index: kg/m2
Waist Hip Ratio
Hand grip strength: kg
Renal function
Mini Mental State Exam Score
Current smoking: 0 = no, 1 = yes
Effect
-0.0019
0.5120
0.3230
0.0020
0.0030
0.0107
na
0.0003
0.0134
0.0418
-0.0064
0.0063
RS
SE
0.0026
0.1219
0.0697
0.0058
0.0023
0.0054
na
0.0004
0.0571
0.0847
0.0100
0.0023
P
4.60E-01
3.11E-05
4.41E-06
7.28E-01
1.89E-01
4.75E-02
na
4.30E-01
8.14E-01
6.22E-01
5.21E-01
6.40E-03
n
829
572
572
691
691
826
na
819
556
827
817
829
Effect
-0.0018
0.1007
0.0276
0.4334
0.1129
0.0052
na
0.0001
0.0253
0.0720
-0.0197
-0.0007
INCHIANTI
SE
P
0.0015
2.33E-01
0.0582
8.37E-02
0.0320
3.90E-01
0.1209
3.61E-04
0.0445
1.15E-02
0.0040
1.91E-01
na
na
0.0002
7.26E-01
0.0308
4.12E-01
0.0494
1.45E-01
0.0146
1.78E-01
0.0009
4.34E-01
n
681
679
679
681
681
681
na
591
673
674
675
681
Effect
0.0006
0.2100
0.1310
0.0067
0.0051
0.0311
na
na
na
0.0757
na
na
NIDDK/PHOENIX
SE
P
0.001
6.30E-01
0.038
2.38E-08
0.026
4.13E-07
0.003
2.42E-02
0.001
4.03E-07
0.008
1.06E-04
na
na
na
na
na
na
0.045
9.53E-02
na
na
na
na
n
1,450
1,450
1,450
1,440
1,440
1,423
na
na
na
1,438
na
na
FHIS-GEN2 (OFFSPRING)
Effect
SE
P
-0.0054
0.0013
2.18E-05
0.2120
0.042
5.03E-07
0.0645
0.025
9.94E-03
0.3699
0.094
8.79E-05
0.1872
0.043
1.42E-05
0.1453
0.059
1.46E-02
na
na
na
na
na
na
-0.0769
0.028
6.77E-03
-0.0430
0.045
3.42E-01
na
na
na
0.0034
0.0007
1.19E-06
n
2,440
2,438
2,435
2,440
2,439
2,439
na
na
2,422
2,439
na
2,440
Supplementary Table 12 – part 2. Associations of transcriptomic Δage with 12 ageing phenotypes in the cohorts SHIP-TREND, KORA, EGCUT, and DILGOM - adjusted
for chronological age and BMI.
Phenotype of Interest
Sex: 0 = male, 1 = female
Systolic bloodpressure: mmHg
Diastolic bloodpressure: mmHg
Total cholesterol levels: mmol/L
HDL cholesterol levels: mmol/L
Fasting glucose levels: mmol/L
Body Mass Index: kg/m2
Waist Hip Ratio
Hand grip strength: kg
Renal function
Mini Mental State Exam Score
Current smoking: 0 = no, 1 = yes
Effect
0.0003
0.1834
0.1068
0.0096
0.0027
0.0031
na
0.0001
na
0.0710
na
0.0117
SHIP-TREND
SE
P
0.0016
8.58E-01
0.0498
2.45E-04
0.0295
3.04E-04
0.0033
3.77E-03
0.0011
1.62E-02
0.0018
9.10E-02
na
na
0.0003
8.04E-01
na
na
0.0615
2.49E-01
na
na
0.0012
2.75E-20
n
970
969
969
970
970
970
na
970
na
970
na
970
Effect
0.0000
0.2732
0.0173
-0.0018
-0.0001
0.3707
na
0.0008
na
na
na
0.0029
KORA
SE
P
0.003
9.99E-01
0.127
3.23E-02
0.063
7.83E-01
0.007
7.79E-01
0.002
9.78E-01
0.145
1.08E-02
na
na
0.000
1.23E-01
na
na
na
na
na
na
0.002
6.57E-02
n
984
983
983
984
984
984
na
984
na
na
na
984
Effect
-0.0021
0.0412
0.0378
0.0057
0.0007
na
na
0.0003
na
-0.0375
na
-0.0058
EGCUT
SE
P
0.001
1.60E-01
0.045
3.58E-01
0.029
1.86E-01
0.003
7.00E-02
0.001
5.97E-01
na
na
na
na
0.000
2.52E-01
na
na
0.052
4.73E-01
na
na
0.001
7.45E-06
n
962
962
962
962
962
na
na
962
na
962
na
962
Effect
0.0007
0.1934
0.1030
0.0019
0.0003
na
na
0.0002
na
na
na
-0.0005
DILGOM
SE
P
0.0026
7.72E-01
0.0880
2.85E-02
0.0500
3.97E-02
0.0048
7.01E-01
0.0018
8.58E-01
na
na
na
na
0.0004
5.96E-01
na
na
na
na
na
na
0.0020
8.23E-01
n
513
511
511
513
513
na
na
511
na
na
na
513
We tested whether the transcriptomic delta age was associated with twelve different phenotypes known to be associated with chronological age. Gene expression levels were
adjusted for plate ID, RNA quality score, fasting state, sex, smoking status, and cell counts. Results are presented per cohort, and these results were the basis for Table 2,
which shows the results of the meta-analysis across all cohorts.
29
Supplementary Table 13. Association of transcriptomic Δage (green), Horvath’s epigenetic Δage (red), and Hannum’s epigenetic Δage (blue) with ageing phenotypes –
adjusted for chronological age, sex, and BMI.
Phenotype of Interest
n
TC-Effect
TC-SE
TC-P
Dir
HO-Effect
HO-SE
HO-P
Dir
HA-Effect
HA-SE
HA-P
Dir
Systolic bloodpressure: SBP (mmHg)
1,197
0.306
0.095
1.30E-03
++
-0.012
0.080
8.80E-01
-+
0.087
0.103
4.02E-01
++
Diastolic bloodpressure: DBP (mmHg)
1,197
0.104
0.051
4.32E-02
+-
-0.059
0.042
1.61E-01
--
-0.028
0.055
6.15E-01
+-
Total cholesterol levels: TC (mmol/L)
1,286
-0.001
0.005
8.71E-01
+-
-0.002
0.004
6.19E-01
--
-0.010
0.005
6.26E-02
--
HDL cholesterol levels: HDL (mmol/L)
1,286
0.003
0.002
1.25E-01
++
-0.002
0.001
1.04E-01
--
-0.003
0.002
1.15E-01
+-
Fasting glucose levels: FG (mmol/L)
1,394
0.011
0.006
5.30E-02
++
-0.003
0.005
5.42E-01
-+
0.013
0.006
3.49E-02
++
WHR
1,388
0.001
0.000
2.13E-02
++
0.001
<0.001
1.33E-02
++
0.001
<0.001
2.51E-03
++
Current smoking: 0 = no, 1 = yes
1,396
0.005
0.002
7.92E-04
++
0.001
0.001
3.71E-01
++
0.004
0.002
5.87E-03
++
Gene expression levels were adjusted for plate ID, RNA quality score, fasting state, sex, smoking status, and cell counts. TC = transcriptomic predictor, HO = Horvath
predictor, HA = Hannum predictor, Dir = direction of the effect, n = sample size of the meta-analysis, EV = explained variance, RS = Rotterdam Study, KORA = The KORA
Study, BMI = Body mass index, WHR = Waist-hip-ratio.
Supplementary Table 14. The explained variance using the transcriptomic predictor (green), the Horvath’s epigenetic predictor (red), and the Hannum’s epigenetic predictor
(blue) of the ageing phenotypes – adjusted for chronological age, sex, and BMI
Phenotype of Interest
n
TC-EV-RS
TC-EV-KORA
HO-EV-RS
HO-EV-KORA
HA-EV-RS
HA-EV-KORA
Systolic bloodpressure: SBP (mmHg)
1,197
0.022
0.001
0.000
0.000
0.000
0.000
Diastolic bloodpressure: DBP (mmHg)
1,197
0.033
0.000
0.000
0.000
0.000
0.000
Total cholesterol levels: TC (mmol/L)
1,286
0.000
0.001
0.000
0.000
0.002
0.001
HDL cholesterol levels: HDL (mmol/L)
1,286
0.000
0.000
0.000
0.005
0.000
0.012
Fasting glucose levels: FG (mmol/L)
1,394
0.007
0.007
0.000
0.007
0.007
0.003
WHR
1,388
0.004
0.015
0.002
0.005
0.012
0.006
Current smoking: 0 = no, 1 = yes
1,396
0.010
0.003
0.002
0.000
0.009
0.001
Gene expression levels were adjusted for plate ID, RNA quality score, fasting state, sex, smoking status, and cell counts. TC = transcriptomic predictor, HO = Horvath
predictor, HA = Hannum predictor, n = sample size of the meta-analysis, EV = explained variance, RS = Rotterdam Study, KORA = The KORA Study, BMI = Body mass
index, WHR = Waist-hip-ratio.
30
Supplementary Table 15. Combining the transcriptomic Δage and Horvath’s epigenetic Δage in one model – associations of both predictors with the ageing phenotypes adjusted for chronological age, sex, and BMI
Phenotype of Interest
n
TC-Effect
TC-SE
TC-P
Dir
HO-Effect
HO-SE
HO-P
Dir
EV-RS
EV-KORA
Systolic bloodpressure: SBP (mmHg)
1,197
0.320
0.097
9.31E-04
++
-0.059
0.080
4.66E-01
-+
0.023
0.000
Diastolic bloodpressure: DBP (mmHg)
1,197
0.121
0.052
2.01E-02
+-
-0.076
0.043
7.48E-02
--
0.038
0.000
Total cholesterol levels: TC (mmol/L)
1,286
<0.001
0.005
9.54E-01
+-
-0.002
0.004
6.27E-01
-+
0.000
0.000
HDL cholesterol levels: HDL (mmol/L)
1,286
0.003
0.002
6.87E-02
++
-0.003
0.001
5.02E-02
--
0.000
0.004
Fasting glucose levels: FG (mmol/L)
1,394
0.012
0.006
3.24E-02
++
-0.006
0.005
2.81E-01
-+
0.008
0.012
WHR
1,388
<0.001
<0.001
5.91E-02
++
<0.001
<0.001
3.68E-02
++
0.004
0.017
Current smoking: 0 = no, 1 = yes
1,396
0.005
0.002
1.45E-03
++
0.000
0.001
7.80E-01
+-
0.010
0.001
Gene expression levels were adjusted for plate ID, RNA quality score, fasting state, sex, smoking status, and cell counts. TC = transcriptomic predictor, HO = Horvath
predictor, n = sample size of the meta-analysis, EV = explained variance, RS = Rotterdam Study, KORA = The KORA Study, BMI = Body mass index, WHR = Waist-hipratio.
Supplementary Table 16. Combining the transcriptomic Δage and Hannum’s epigenetic Δage in one model – associations of both predictors with the ageing phenotypes adjusted for chronological age, sex, and BMI
Phenotype of Interest
n
TC-Effect
TC-SE
TC-P
Dir
HA-Effect
HA-SE
HA-P
Dir
EV-RS
EV-KORA
Systolic bloodpressure: SBP (mmHg)
1,197
0.309
0.100
1.89E-03
++
-0.003
0.107
9.76E-01
-+
0.020
0.000
Diastolic bloodpressure: DBP (mmHg)
1,197
0.123
0.054
2.17E-02
+-
-0.056
0.058
3.29E-01
--
0.032
0.000
Total cholesterol levels: TC (mmol/L)
1,286
0.002
0.005
6.74E-01
+-
-0.010
0.005
6.36E-02
--
0.003
0.001
HDL cholesterol levels: HDL (mmol/L)
1,286
0.004
0.002
3.23E-02
++
-0.004
0.002
3.54E-02
--
0.000
0.011
Fasting glucose levels: FG (mmol/L)
1,394
0.008
0.006
1.50E-01
++
0.011
0.006
9.63E-02
++
0.011
0.007
WHR
1,388
<0.001
<0.001
1.34E-01
++
0.001
<0.001
1.62E-02
++
0.012
0.016
Current smoking: 0 = no, 1 = yes
1,396
0.004
0.002
7.34E-03
++
0.003
0.002
6.00E-02
++
0.015
0.002
Gene expression levels were adjusted for plate ID, RNA quality score, fasting state, sex, smoking status, and cell counts. TC = transcriptomic predictor, HA = Hannum
predictor, n = sample size of the meta-analysis, EV = explained variance, RS = Rotterdam Study, KORA = The KORA Study, BMI = Body mass index, WHR = Waist-hipratio.
31
Supplementary Table 17. Description of the discovery cohorts.
Discovery Cohort
Sample size
Primary ancestry
Cell type
Age (mean)
Fasting
Type of Cohort
Covariates Included
EGCUT
1,086
European
Whole blood
38.2
Y
Population-Based
cell counts, plateID, RQS, sex, smoking status, fasting status
FHS - OFFSPRING
(GEN 2: EXAM 8)
2,608
European-American
Whole blood
66.4
Y
Family-Based
plateID, RQS, sex, smoking status, fasting status, family design
INCHIANTI
698
European
Whole blood
72.2
N
Population-Based
cell counts, plateID, sex, smoking status
KORA
993
European
Whole blood
70.4
Y
Population-Based
#platelets, plateID, RQS, sex, smoking status, fasting status
RS-III
881
European
Whole blood
59.8
Y
Population-Based
cell counts, plateID, RQS, sex, smoking status, fasting status
SHIP-TREND
991
European
Whole blood
50.2
Y
Population-Based
cell counts, plateID, RQS, sex, smoking status, fasting status
The sample size, the primary ancestry, the cell type, the mean age, the fasting status, the type of cohort, and the covariates used in the linear regression analysis.
Supplementary Table 18. Description of the replication cohorts.
Replication Cohort
Sample size
Primary ancestry
Cell type
Age (mean)
Fasting
BSGS
962
European-Australian
Whole blood
20.1 (bi-model distribution)
DILGOM
512
European
Whole blood
51.5
FEHRMANN
1,191
European
Whole blood
62.8
N
FHS - GEN 3
(GEN 3: EXAM 2)
3,180
European-American
Whole blood
46.4
Y
Family-Based
cellcounts, plateID, RQS, sex, smoking status,
fasting status, family design
GTP
359
African-American
Whole blood
42.5
Y
Population-Based
plateID, array version, sex, RQS
HVHv3
121
European-American
Whole blood
68.4
N
MI/STROKE/AF cases & controls
cellcounts, plateID, RQS, sex
227
European-American
Whole blood
68.7
N
MI/STROKE/AF cases & controls
cellcounts, plateID, RQS, sex
1,457
Native American
Whole blood
35.9
Y
Population-Based
plateID, sex
HVHv4
NIDDK/PHOENIX
Type of Cohort
Covariates Included
Y
Family-Based
cellcounts, plateID, RQS, sex, fasting status
Y
Population-Based
COPD/ALS
cases & controls
sex, fasting status
Sex
The sample size, the primary ancestry, the cell type, the mean age, the fasting status, the type of cohort, and the covariates used in the linear regression analysis.
32
Supplementary Table 19. Description of the generalization cohorts.
Generalization Cohort
BOSTON COHORT-CD4+
Sample size
Primary ancestry
Cell type
Age (mean)
Fasting
Type of Cohort
213
Multi-ethnic
CD4+ cells
28.4
na
Population-Based
EGCUT-CD4+
302
European
CD4+ cells
53.1
na
Population-Based
EGCUT-CD8+
299
European
CD8+ cells
52.6
na
Population-Based
BOSTON COHORT-CD14+
213
Multi-ethnic
CD14+ cells
28.4
na
Population-Based
MESA-MONOCYTES
354
Multi-ethnic
Monocytes
70.2
na
NABEC-UKBEC-CB
394
European
Cerebellum
51.3
na
NABEC-UKBEC-FC
394
European
Frontal cortex
51.3
na
GENOA-LCLs
869
Multi-ethnic
LCLs
59.0
na
SAFS-LYMPHOCYTES
Covariates Included
sex
plateID, sex, smoking status, amount of RNA per
sample
plateID, sex, smoking status, amount of RNA per
sample
sex
Autopsy brain samples: no
recognisable neurological disease
Autopsy brain samples: no
recognisable neurological disease
cellcounts, plateID, RQS, smoking status, fasting
status
batch, sex, postmortem interval, 2 Principal
Components
batch, sex, postmortem interval, 2 Principal
Components
Hypertension Siblings
plateID, RQS, sex, smoking status
Atherosclerosis cases & controls
1,244
Hispanic
Lymphocytes
39.3
Y
Family-Based
sex, family design
GARP-PBMCs
134
European
PBMC
60.1
N
Osteoarthritis cases & controls
plateID, sex, smoking status, fasting status
PBMC-MS
228
Multi-ethnic
PBMC
40.9
N
MS cases & controls: treated with
IFN-b, glatiramer acetate or
untreated
sex
The sample size, the primary ancestry, the cell type, the mean age, the fasting status, the type of cohort, and the covariates used in the linear regression analysis.
33
Supplementary Table 20. Direct associations between chronological age and the ageing phenotypes.
META-ANALYIS
Phenotype of Interest
Zscore
P
Direction
n
Sex: 0 = male, 1 = female
0.585
5.59E-01
++-++-+-
8,836
Systolic bloodpressure: mmHg
27.317
2.66E-164
++++++++
8,571
Diastolic bloodpressure: mmHg
-1.605
1.08E-01
+-+-+-++
8,568
Total cholesterol levels: mmol/L
5.491
3.99E-08
+-+-+-++
8,688
HDL cholesterol levels: mmol/L
-1.247
2.12E-01
+-+-----
8,687
Fasting glucose levels: mmol/L
13.292
2.58E-40
++++++??
7,330
Body Mass Index: kg/m2
8.238
1.75E-16
+++-++++
8,829
Waist Hip Ratio
15.490
4.05E-54
++??++++
4,837
Hand grip strength: kg
-23.141
1.79E-118
--?-????
3,651
Renal function
-42.159
2.14e-388
-----?-?
7,317
Mini Mental State Exam Score
-13.397
6.32E-41
--??????
1,492
Current smoking: 0 = no, 1 = yes
-11.587
4.81E-31
--?---+-
7,379
We tested whether chronological age was associated with the twelve phenotypes known to be associated with chronological age. Gene expression levels were adjusted for
plate ID, RNA quality score, fasting state, sex, smoking status, and cell counts. Results were meta-analyzed over all cohorts.
34
Supplementary Table 21. Calculation of mean age and the pooled variance over all samples in the meta-analysis.
COHORT
MEAN AGE
SD AGE
s2 (variance)
n
n-1
(n-1)*s2
DILGOM
51.90
13.70
187.69
512
511
95909.59
EGCUT
38.22
15.76
248.38
1,086
1,085
269489.70
FHS-OFFSPRING
66.40
8.95
80.10
2,446
2,445
195850.61
INCHIANTI
72.23
15.27
233.17
695
694
161821.99
KORA
70.38
5.37
28.79
993
992
28563.60
NIDDK/PHOENIX
35.90
12.30
151.29
1,457
1,456
220278.24
RS
59.80
8.10
65.61
875
874
57343.14
SHIP-TREND
50.59
13.72
188.35
991
990
186464.69
MEAN AGE
55.81
POOLED s2(VARIANCE)
134.38
POOLED SD
11.59
We calculated the pooled variance using the mean age, the standard deviation, and the sample size, as described on http://en.wikipedia.org/wiki/Pooled_variance
35
SUPPLEMENTARY NOTE 1
Descriptions of the participating study populations
Brisbane Systems Genetics Study (BSGS)
Individuals present in this study were recruited as part of the Brisbane Twin Nevus and cognition
studies (known as BTN and MAPS respectively). As described in detail elsewhere1, adolescent MZ and DZ
twins, their siblings, and their parents have been recruited over a 16 year period into an ongoing study of the
genetic and environmental factors influencing pigmented nevi and the associated risk of developing skin
cancer and cognition. The sample is of northern European origin (mainly Anglo-Celtic). A Principal
Component Analysis (PCA) comparing individuals in this study to HapMap3 (International HapMap3
Consortium) and GenomEUtwin2 populations shows the close similarity of ancestry to northern European
populations. All participants gave informed consent, and the appropriate institutional review boards approved
the study protocol. Whole blood for expression profiling was collected directly into PAXGene ™ tube
(QIAGEN, Valencia, CA). Total RNA was extracted from PAXGene™ tubes using the WB gene RNA
purification kit (QIAGEN, Valencia, CA). RNA from all samples was run on an Agilent Bioanalyzer to assess
quality and to estimate RNA concentrations RNA was converted to cDNA, amplified and purified using the
Ambion Illumina TotalPrep RNA Amplification Kit (Ambion).
Expression profiles were generated by hybridising 750 ng of cRNA to Illumina HumanHT-12 v4.0
Beadchip according to Illumina whole-genome gene expression direct hybridization assay guide (Illumina Inc,
San Diego, USA). Briefly, 500 ng of total RNA were used to generate biotinylated cRNA, which was
fragmented and hybridised to an Illumina whole genome expression chip, HumanHT-12 v4.0 for 18 h at 58°C.
Beadchips were then washed and stained and subsequently scanned to obtain fluorescence intensities. Samples
were scanned using an Illumina Bead Array Reader. Samples were randomized across chips and chip
positions, with checks for balance across families, sex and generation. Full details of the BSGS cohort and
sample preparation are given elsewhere3,4. The expression data is available at GEO (Gene Expression
Omnibus) public repository under the accession GSE33321.
DNA methylation was measured on 614 individuals from 117 families of European descent
recruited as part of BSGS5. Bisulfite conversions were performed in 96 well plates using the EZ-96 DNA
Methylation Kit (Zymo Research, Irvine, CA, USA). Prior to conversion, DNA concentrations were
determined by NanoDrop quantification (NanoDrop Technologies, Inc., Wilmington, DE, USA) and
standardised to include 500ng. Three technical replicates were included in each conversion to assess
repeatability. A commercial female human genomic DNA sample (Promega Corporation, Madison, WI, USA)
was used on all plates, one sample from each run was duplicated on the plate and one sample duplicated from
a different plate. DNA recovery after conversion was quantified using Nanodrop (Thermo Scientific,
Wilmington, DE, USA).
Bisulfite converted DNA samples were hybridised to the 12 sample, Illumina
HumanMethylation450 BeadChips using the Infinium HD Methylation protocol and Tecan robotics (Illumina,
San Diego, CA, USA). The HM 450 BeadChip-assessed methylation status was interrogated at 485,577 CpG
sites across the genome. It provides coverage of 99% of RefSeq genes. Methylation scores for each CpG site
are obtained as a ratio of the intensities of fluorescent signals and are represented as β-values. Samples were
randomly placed with respect to the chip they were measured on and to the position on that chip in order to
avoid any confounding with family. Box-plots of the red and green intensity levels and their ratio were used to
ensure that no chip position was under- or over-exposed, with any outlying samples repeated. Similarly, the
proportion of probes with detection p-value less than 0.01 was examined to confirm strong binding of the
sample to the array.
Methylation probes on the sex chromosomes or having been annotated as binding to multiple
chromosomes were removed from the analysis, as were those with zero CpG sites. The probability of a probe
within a sample either being called as missing or with a detection p-value less than 0.001 were estimated from
the average rate across all probes and samples. A threshold for probes showing significant deviation from
random missingness (or excess poor binding) was determined by testing against a binomial distribution for the
number of samples at the 0.05 significance level with a Bonferroni correction for the number of probes. Any
probe with more than 11 individuals with missing data or more than five individuals with detection p-values >
36
0.001 were removed. After cleaning a total of 417,069 probes remained.
Dietary, Lifestyle, and Genetic determinants of Obesity and Metabolic syndrome study (DILGOM)
The Finnish study samples included a total of 513 unrelated individuals aged 25–74 years from the
Helsinki area, recruited during 2007 as part of the DILGOM study, an extension of the FINRISK 2007 study
described earlier6. Study participants were asked to fast overnight (at least 10 hours) prior to giving a blood
sample.
To obtain stabilized total RNA, we used the PAXGene Blood RNA System (PreAnalytiX GMbH,
Hombrechtikon, Switzerland). It included collection of 2.5 ml peripheral blood into PAXGene Blood RNA
Tubes (Becton Dickinson and Co., Franklin Lakes, NJ, USA) and total RNA extraction with PAXGene Blood
RNA Kit (Qiagen GmbH, Hilden, Germany). Protocol recommended by the manufacturer was used. The
integrity and quantity of the RNA samples were evaluated with the 2100 Bioanalyzer (Agilent Technologies,
Santa Clara, CA, USA). Biotinylated cRNA was produced from 200 ng of total RNA with Ambion Illumina
TotalPrep RNA Amplification Kit (Applied Biosystems, Foster City, CA, USA), using the protocol specified
by the manufacturer. 750 ng of biotinylated cRNA were hybridized onto Illumina HumanHT-12v3 Expression
BeadChips (Illumina Inc., San Diego, CA, USA), using standard protocol. After sample mix-up correction,
509 samples were included for further analysis in this cohort. The expression data is available at ArrayExpress
public repository under the accession E-TABM-1036.
Estonian Gene Expression Cohort (EGCUT)
The Estonian Gene Expression Cohort is composed of 1,124 randomly selected samples (mean age
37.8 years) from the Estonian Genome Center, University of Tartu (EGCUT, www.biobank.ee). The EGCUT
is the population based database which comprises currently the health, genealogical and genome data of more
than 51,530 individuals 18 years of age and up reflecting closely the age distribution in the adult Estonian
population. Participants of EGCUT recruited by the general practitioners (GP) from GP offices, physicians
from the hospitals or data collectors from EGCUT’s patient recruitment offices. Each participant filled out a
Computer Assisted Personal interview during 1-2 hours at a doctor’s or data collector’s office, including
personal data (place of birth, place(s) of living, nationality etc.), genealogical data (family history, three
generations), educational and occupational history and lifestyle data (physical activity, dietary habits,
smoking, alcohol consumption, quality of life). Anthropometric and physiological measurements were also
taken. All diseases are defined according to the ICD10 coding. Women filled out additional questionnaire
relating to the woman’s health.
The collection of blood samples and the data is conducted according to the Estonian Gene Research
Act and all participants have signed the broad informed consent. For gene expression profiling, whole blood
samples were collected in Tempus Blood RNA Tubes (Life Technologies, NY, USA). RNA was extracted
using Tempus Spin RNA Isolation Kit (Life Technologies, NY, USA) and quantified by NanoDrop 1000
Spectrophotometer (Thermo Fisher Scientific, DE, USA). RNA integrity was assessed by Agilent 2100
Bioanalyzer (Agilent Technologies, CA, USA). Samples with RIN<7.0 were excluded. Following
amplification and labelling of RNA by Ambion TotalPrep RNA Amplification Kit (Life Technologies, NY,
US), the whole genome gene expression levels were obtained by Illumina HT12v3 arrays (Illumina Inc, San
Diego, US) according manufactures protocols. 1,086 samples passed the general quality control and were
included in the subsequent analyses. The expression data is available at GEO (Gene Expression Omnibus)
public repository under the accession GSE48348.
Methylation data pre-processing and quality control analyses were performed in R using the
Bioconductor package minfi7 . ‘Raw’ pre-processing was used to convert the intensities from the red and the
green channels into methylated and unmethylated signals. Beta values were computed using Illumina’s
formula [beta = M/(M+U+100)]. The difference in the distribution of beta values for type I and type II probes
was corrected for using the SWAN normalization method8. Detection p-values were obtained for every CpG
probe in every sample. Failed positions were defined as signal levels lower than background from both the
methylated and unmethylated channels. Samples with high proportion of failed position were discarded from
further analyses.
For the purification of CD4+ and CD8+ T-cells, we obtained peripheral blood from healthy donors
of the Estonian Genome Center of the University of Tartu (Tserel et al., in press). Peripheral blood
37
mononuclear cells (PBMC) were extracted using Ficoll-Paque (GE Healthcare) gradient centrifugation. CD4+
T cells and CD8+ T cells were extracted from the PBMCs by consecutive positive separation using microbeads
(CD4+ #130-045-101; CD8+ #130-045-201) and AutoMACS technology (Miltenyi Biotec) according to the
manufacturer's protocol. RNA was extracted using the miRNeasy Mini Kit combined with a recommended
RNase-free DNase I treatment (both from Qiagen) according to the manufacturer’s protocol. The RNA was
labeled and amplified using the TargetAmp Nano Labeling Kit for Illumina Expression BeadChip (Epicentre
Biotechnologies) with SuperScript III Reverse Transcriptase (Life Technologies) according to the
manufacturer's protocol, followed by purification with the RNeasy MinElute Cleanup Kit (Qiagen). The
labelled RNA samples were hybridized to HumanHT-12 v4 Expression BeadChips (Illumina) according to the
manufacturer's instructions.
Fehrmann et al. dataset (FEHRMANN)
The Fehrmann dataset consists of whole peripheral blood samples of 1,469 unrelated individuals
from the United Kingdom and the Netherlands9,10. Some of these individuals are patients, while others are
healthy controls. RNA levels were quantified using both the Illumina H8v2 platform (229 samples) and the
HT12v3 platform (1,240 samples), as has been described before. The total number of samples having geneexpression data and age equals 1,191. The expression data is available at GEO (Gene Expression Omnibus)
public repository under the accessions GSE20332 and GSE20142.
Framingham Heart Study (FHS)
The Framingham Heart Study (FHS) is a community-based, prospective, longitudinal study of three
generations of participants. The original cohort enrolled 5,209 participants starting in 1948 and the Offspring
(Second Generation) cohort enrolled 5,124 children and spouses of children of the original cohort starting in
197111. From 2002 to 2005 the grandchildren of the original cohort were enrolled in the Third Generation
cohort. Participants gave informed consent for research and the study is approved by the Boston University
IRB. Participants received clinic visits examinations over time including detailed medical histories, standard
exam measurements and had fasting blood samples collected.
Fasting whole blood samples (PAXGene Tubes-Becton Dickinson) were collected from the FHS
OFFSPRING (at their 8th examination cycle), and the FHS 3rd GENERATION (at their 2nd examination cycle).
Details of the cohort designs and ascertainments have previously been described39. RNA was extracted from
whole blood samples following the manufacturers' protocol (PAXGene Blood RNA kit - Assuragen). 50 ng of
total RNA were amplified following the NuGen WG-Ovation Pico RNA amplification system and labeling
conducted with the FL-Ovation cDNA Biotin Module V2 (NuGen, San Carlos, CA). Fragmented, biotinylated
cDNA (5.5ug) was prepared for each sample and added to a hybridization cocktail and loaded onto an
Affymetrix Human Exon 1.0 ST GeneChip (1.4 million probesets), and hybridized at 450C and 60 rpm for
16h. The manufacturer's protocol was followed for washing and staining, and stained arrays were scanned at
532 nm in an Affymetrix GeneChip Scanner 3000 to generate CEL files for each array. The expression data is
available at dbGAP public repository under the accession phs000363.v7.p8.
Genetics, osteoARthritis and Progression (GARP)
The GARP study is a study among Dutch Caucasian sib pairs with symptomatic osteoarthritis at
multiple joint locations: the GARP study consists of 191 sib pairs (N=382) of white, Dutch, ancestry. All
participants (age-range: 40-70 years; mean age: 60 years) are clinically and radiographically diagnosed with
primary, symptomatic osteoarthritis at multiple joint sites in the hand, or in at least two joints of the following
locations: hand, spine, knee, or hip12.
For the current study, whole genome expression profiles were analyzed from 108 participants (68
unrelated families) of the GARP study and 26 age-matched healthy controls was used. Details on the
generation of expression profiles and analysis are described earlier13. In short, blood of participants was
collected and mononuclear blood cells were separated with Histopaque® gradient prior to RNA isolation.
After RNA isolation the quality of 36 random samples was analyzed. Samples had an RNA integrity number
(RIN) of 8.3 or higher, and an average 28S/18S ratio of 2.2 (range: 1.8-2.7). For cDNA synthesis,
amplification, biotin labeling, and hybridization with 500ng of total RNA the Ambion® TotalPrep™-96 RNA
amplification kit (Life Technologies) was used according to the manufacturer’s protocol. Samples were
38
hybridized onto the microarrays (Illumina Human HT-12_v3_BeadChip’s; Illumina). Quality control was
performed in the R statistical programming language using the lumi-package. Total number of samples
included in the current work is 134.
For the methylation analysis, genomic DNA was extracted with phenol-chloroform, and isolated
DNA was treated with sodium bisulphite using the ZymoResearch EZ DNA Methylation kit. DNA
methylation was assayed at over 450,000 sites on the Illumina Infinium HumanMethylation 450K BeadChips.
Quality control was performed in the R statistical programming language using the minfi- and methylumipackage. Total number of samples with data on expression and methylation included in the current work is
120. The expression data is available at GEO (Gene Expression Omnibus) public repository under the
accession GSE48556.
Genetic Epidemiology Network of Arteriopathy (GENOA)
The Genetic Epidemiology Network of Arteriopathy (GENOA) study consists of hypertensive
sibships that were recruited for linkage and association studies in order to identify genes that influence blood
pressure and its target organ damage14. In the initial phase of the GENOA study (Phase I: 1996-2001), all
members of sibships containing ≥ 2 individuals with essential hypertension clinically diagnosed before age 60
were invited to participate, including both hypertensive and normotensive siblings.
The GENOA gene expression cohort is composed of 883 European-American individuals
participating in the “Genetics of Microangiopathic Brain Injury” substudy, which investigates the genetic
basis of alteration in brain structure detectable by magnetic resonance imaging15.
RNA samples from cell lines established from peripheral blood samples by Epstein-Barr virus
transformation were extracted using standard protocols. RNA quality was assessed using the Agilent 2100
Bioanalyzer (Agilent Technologies Inc., Foster City, CA) and quantified by spectrophotometry using the
Nanodrop ND-1000 (Nanodrop Inc., Wilmington, DE). All RNA samples used in the present study yielded
both an A260/A280 absorbance ratio greater than 2.0 and a RNA Integrity Number (RIN) ≥ 8. One μg of
RNA was labeled using the WT Expression labeling assay (Applied Biosystems/ Ambion, Foster City, CA)
including the labeling controls from the GeneChip Eukaryotic Poly-A RNA Control Kit (Affymetrix, Santa
Clara, CA). Each step of the labeling protocol was monitored using the Agilent 2100 Bioanalyzer or the
Nanodrop spectrophotometer, as recommended by the manufacturer. Labeled cRNAs were hybridized onto
the Affymetrix Human Exon 1.0 ST Array.
Array quality control was performed using Affymetrix Expression Console™ (v 1.1) at the
transcript level using core-level probe sets. All array images passed visual inspection. Hybridization controls
were all present with signal increases following concentration. Labeling control signal strengths followed the
order Lys < Phe < Thr < Dap. Signal intensity plots were examined for raw and processed data to identify
outliers. Only core probesets were used to assess exon-level expression. Probe sets, which are known to crosshybridize and those with undetectable expression were also excluded. Transcript-level expression was
assessed by averaging all the core probe sets for that gene. QC metrics were again examined to identify
possible outliers or non-performing samples using the Partek Genomic Suite software (V.6.6). These included
the mean raw intensity for all probes, the distribution of RMA normalized intensities, and principal
component analysis. We also verified sex assignment of the samples by examining expression levels of genes
on the Y chromosome.
RNA quality control and microarray expression profiling experiments were conducted at the
laboratory of Dr. Myriam Fornage at the University of Texas Health Science Center at Houston. The
expression data is available at GEO (Gene Expression Omnibus) public repository under the accession
GSE49531.
Grady Trauma Project (GTP)
The Grady Trauma Project (GTP) is a population-based, prospective study of demographic
characteristics, trauma exposure, and prevalence of post-traumatic stress disorder and major depressive
disorder in an urban, predominantly African-American population16. Subjects were recruited prospectively
from the waiting rooms of primary care and obstetrics-gynecology clinics of Grady Memorial Hospital in
Atlanta, GA. Exclusion criteria included mental retardation, active psychosis, or the inability to give informed
consent. Written and verbal informed consent was obtained for all participating subjects. All procedures in
39
this study were approved by the Institutional Review Boards of Emory University School of Medicine and
Grady Memorial Hospital. Since its inception in 2005, over 5000 subjects have been interviewed for the study.
For the expression analysis, whole blood was collected between 8 - 9 a.m. in Tempus RNA tubes
for 398 subjects. All subjects were instructed to fast before blood collection. Whole genome expression
profiles were generated for 398 subjects at the Max-Planck Institute as follows: RNA was isolated using the
Versagene kit (Gentra Systems, Minneapolis, U.S.A.), quantified using the Nanophotometer and quality
checks were performed on the Agilent Bioanalyzer. 250 nanograms of total RNA were reverse transcribed to
cDNA, converted to cRNA and biotin-labeled using the Ambion kit (AMIL1791, Applied Biosystems), 750
nanograms of cRNA were hybridized to Illumina HT-12 v3.0 or v4.0 arrays (Illumina, San Diego, California,
U.S.A) and incubated overnight for 16 hours at 55ºC. Arrays were washed, stained with Cy3 labeled
streptavidin, dried and scanned on the Illumina BeadScan confocal laser scanner. 21,394 transcripts were on
both the v3.0 and v4.0 arrays and were significantly expressed above background levels (detection P<.05) in
at least 10% of subjects, and were thus eligible for further analysis. Of the initial 398 subjects, 359 subjects
with self-reported African-American ancestry were selected for this analysis. Age of subjects at blood draw
ranged from 16-78 years. The expression data is available at GEO (Gene Expression Omnibus) public
repository under the accession GSE58137.
For the methylation analysis, we extracted DNA from whole blood at the Max Planck Institute in
Munich using the Gentra Puregene Kit (Qiagen). Genomic DNA was then bisulfite converted using the Zymo
EZ-96 DNA Methylation Kit (Zymo Research). We assessed DNA methylation at >480,000 CpG sites using
Illumina HumanMethylation450 BeadChip arrays, with hybridization and processing performed according to
the instructions of the manufacturer. For each CpG site and individual, we collected two data points: M (the
total methylated signal), and U (the total unmethylated signal). We set to missing data points with 1) a
detection p-value greater than 0.001 or 2) a combined signal less than 25% of the total median signal and less
than both the median unmethylated and median methylated signal. We removed individual samples from
analysis if they were outliers in a hierarchical clustering analysis or had 1) a mean total signal less than half of
the median of the overall mean signal or 2000 arbitrary units, or 2) a missingness rate above 5%. Similarly,
we removed from analysis CpG sites with a missingness rate above 10%. We then computed β-values for each
individual at each CpG site as the total methylated signal divided by the total signal.
Heart and Vascular Health Study (HVH)
The Heart and Vascular Health (HVH) study17-19 constitutes a group of population based case
control studies of myocardial infarction (MI), stroke, venous thromboembolism (VTE), and atrial fibrillation7.
Study participants were 30-79 year old members of Group Health, a large integrated health care organization
in Washington State. Cases were identified from hospital discharge diagnosis codes and subsequently
validated by medical record review. Cases shared a common control group that was a random sample of
Group Health members, frequency-matched to MI cases on age (within decade), sex, treated hypertension, and
calendar year of identification. The HVH study started in 1987 and blood specimen has been collected since
1995. Study eligibility, participant characteristics, and risk factor information were collected by medical
record review and telephone interview. In addition, surviving cases and controls who agreed to participate had
a blood draw.
Since 2003, whole blood has been collected in PAXGene tubes for mRNA expression studies.
Participants of the current study (N=348) are those for whom expression profiling was done as part of several
gene expression pilot studies conducted among HVH controls to investigate incident cardiovascular disease,
hormone therapy, medications, diabetes, and atrial fibrillation. The Group Health human subjects review
committee approved the study and all participants provided written informed consent.
Total RNA was extracted using PAXGene Blood RNA Kit and RNase-Free DNase Set (QIAGEN
Inc., Valencia, CA) at the Fred Hutchinson Cancer Research Center, Seattle, WA. RNA integrity and quality
was assessed using Agilent 2100 Bioanalyzer (Agilent Technologies Inc., Santa Clara, CA). Illumina®
TotalPrep™-96 RNA Amplification Kit (Life Technologies Corp., Carlsbad, CA) was used for RNA
amplification and labeling using manufacturer’s instructions. Labeled cRNAs were hybridized onto Illumina
HumanHT-12v3 and Illumina HumanHT-12v4 Expression Beadchip (Illumina, San Diego, CA) arrays,
according to manufacturer’s protocols. The images of the array chips were captured using an Illumina
Beadarray scanner and scanned array images were imported into Illumina’s GenomeStudio Gene Expression
40
Module. RNA quality control and microarray expression profiling experiments were conducted at the
laboratory of Dr. Jerome Rotter at the Medical Genetics Institute at Cedars-Sinai Medical Center, Los
Angeles, CA. The expression data is available at GEO (Gene Expression Omnibus) public repository under
the accession GSE47729.
Boston Cohort (CD4+ T cells and CD14+ monocytes)
Healthy European-American individuals were sampled from the population of Boston,
Massachusetts (n=211). Blood samples from each individual underwent flow cytometric purification to
independently isolate CD4+CD8-CD3+ T cells and CD14+CD16- monocytes. Resulting cDNA was profiled
using Affymetrix ST1.0 HuGene arrays. The sampled individuals ranged in age from 18 to 54 years of age.
The expression data is available at GEO (Gene Expression Omnibus) public repository under the accession
GSE56035.
Invecchiare in Chianti, ageing in the Chianti area (InCHIANTI)
The InCHIANTI study (http://www.inchiantistudy.net)20 is a population-based, prospective study of
human ageing in the Tuscany area of Italy. 1,455 participants were enrolled at baseline (1998-2000), with
follow-up waves every 3 years. Extensive interviews, questionnaires, medical examinations, physical tests and
blood samples were taken at every wave. Ethical approval was granted by the Instituto Nazionale Riposo e
Cura Anziani institutional review board in Italy, and participants gave informed consent to participate.
Peripheral blood specimens were collected at wave 4 (year 9, 2008⁄9) from 712 individuals, using
the PAXGene technology to preserve levels of mRNA transcripts as they were at the point of collection 21.
RNA was extracted from peripheral blood samples using the PAXGene Blood mRNA kit (Qiagen, Crawley,
UK) according to the manufacturer’s instructions. RNA was biotinylated and amplified using the Illumina®
TotalPrep22 -96 RNA Amplification Kit and directly hybridized with HumanHT-12_v3 Expression BeadChips
that include 48,803 probes. Image data was collected on an Illumina iScan and analyzed using the Illumina
and Beadstudio software (Illumina, San Diego, California, USA) as previously described23. All microarray
experiments and analyses complied with MIAME guidelines. The total number of InCHIANTI samples with
good quality whole-genome expression data equals 698, 695 of which also have cell-count data.
CpG methylation data was generated for a subset of the samples seen during follow-up wave 3 (the
‘gene expression’ wave) using the Illumina Infinium HumanMethylation450 BeadChip. Briefly, genomic
DNA was bisulfite converted using Zymo EZ-96 DNA Methylation Kit, followed by CpG analysis using the
aforementioned Illumina 450k array. Quality control of the samples included exclusion based on sexdiscrepancy and call-rate thresholds. Normalization of the arrays was performed using the ‘wateRmelon’ 24 R
package (specifically the DASEN method), which includes quantile normalization between probe-types and
arrays. Samples having 5% of sites with a detection P-value>0.01 were removed. After exclusions, 506
samples had robust data available for analysis 25. The expression data is available at GEO (Gene Expression
Omnibus) public repository under the accession GSE48152.
KOoperative gesundheitsforschung in der Region Augsburg (KORA)
KORA F4 (Cooperative Heath Research in the Region of Augsburg) is a population-based survey in
the region of Augsburg in Southern Germany. KORA exists since 1996 in the region of Augsburg in the
southwest of Germany, and it is a regional research platform for population-based surveys and follow-up
studies. Four cross-sectional health surveys have been performed in five-year intervals, each containing
independent random samples of individuals with German nationality resident in Augsburg city or one of
sixteen communities from the adjacent counties. 3,080 samples were collected for KORA F4 between 2006
and 200826. The study followed the recommendations of the Declaration of Helsinki and was approved by the
local ethical committees.
For the expression analysis, the subset from the survey F4 (2004-2006) of 1002 elderly individuals
aged 61 to 82 years was used27. Gene expression profiling was performed using the Illumina HumanHT12v3
BeadChip as described elsewhere28. RNA was isolated from whole blood under fasting conditions using
PAXGene Blood miRNA Kit (Qiagen, Hilden, Germany). Purity and integrity of the RNA was analysed using
the Agilent Bioanalyzer with the 6000 Nano LabChip reagent set (Agilent Technologies, Germany). Samples
with low quality were excluded after manually inspection. Using the Illumina TotalPrep-96 RNA Amp Kit
41
(Ambion), 500ng of RNA was reverse transcribed into cRNA, and biotin-UTP-labelled. 3000ng of cRNA was
hybridized to the Illumina HumanHT12v3 Expression BeadChips, followed by washing steps as described in
the Illumina protocol. After quality control, 993 samples were available for analysis. The expression data is
available at ArrayExpress public repository under the accession E-MTAB-1708.
Genome-wide DNA methylation patterns were analyzed using the Infinium HumanMethylation450
BeadChip array (Illumina) as described elsewhere29. The percentage of methylation at a given cytosine is
reported as a β-value, which is a continuous variable between 0 and 1, corresponding to the ratio of the
methylated signal over the sum of the methylated and unmethylated signals. The M-value is calculated as the
log2 ratio of the intensities of methylated probe vs. unmethylated probe30.
Raw methylation data were extracted with Illumina Genome Studio (version 2010.3) with
methylation module (version 1.8.5) and preprocessed using R (version 3.0.1). For data pre-processing of the
Infinium Human Methylation 450K BeadChip we used the pipeline described earlier with default parameter
settings to avoid bias in the analysis since the assay combines two different chemistries 31. In brief, CpG sites
in close proximity (50bp) to common SNPs and on allosomal positions were removed and color bias
adjustment based on a smooth quantile normalization method as well as background level correction based on
negative-control probes was performed for each chip using the R lumi package32. Finally, the pipeline
performs subset quantile normalization, including only probes with detection p-values < 0.01, in order to
correct for the InfI/InfII shift and normalize between samples. Therefore, the target CpGs were separated into
different categories using CpG island annotation. For analysis we considered only beta-values associated with
detection p-value < 0.01. Three samples were excluded due to chip wise detection rate < 80%.
Multi-Ethnic Study of Atherosclerosis (MESA)
The MESA study was designed to investigate the prevalence, correlates, and progression of
subclinical cardiovascular disease in a population cohort of 6,814 participants. Since its inception in 2000
there have been five clinic visits during which extensive clinical, socio-demographic, lifestyle and behavior,
laboratory, nutrition, and medication data were collected33. The present analysis is primarily based on analyses
of purified monocyte samples from the most recent examination (April 2010-February 2012) from 734
randomly selected MESA participants, 55-94 years old, from four MESA field centers (Baltimore, MD;
Forsyth County, NC; New York, NY; and St. Paul, MN).
Centralized training of technicians, standardized protocols, and numerous quality control (QC)
measures were implemented for collection, on-site processing, and shipment of MESA specimens and routine
calibration of equipment. Blood was initially collected in sodium heparin-containing Vacutainer CPTTM cell
separation tubes (Becton Dickinson, Rutherford, NJ) to separate peripheral blood mononuclear cells from
other elements within 2 hours from blood draw. Subsequently, monocytes were isolated with the anti-CD14
coated magnetic beads, respectively, using AutoMACs automated magnetic separation unit (Miltenyi Biotec,
Bergisch Gladbach, Germany). Based on flow cytometry analysis of 18 specimens, monocyte samples were
consistently greater than 90% pure.
DNA and RNA were isolated from samples simultaneously using the AllPrep DNA/RNA Mini Kit
(Qiagen, Inc., Hilden, Germany). QC metrics were examined on the DNA and RNA samples, including
optical density22 measurements, using a NanoDrop spectrophotometer and evaluation of the integrity of the
18s and 28s ribosomal RNA. RNA QC testing was performed using the Agilent 2100 Bioanalyzer with RNA
6000 Nano chips (Agilent Techonology, Inc., Santa Clara, CA) according to the manufacturer’s instructions.
RNA with RIN (RNA Integrity) scores > 9.0 was used for global gene expression microarrays.
The Illumina HumanHT-12 v4 Expression BeadChip and the Illumina Bead Array Reader were
used to perform the genome-wide expression analysis, following the Illumina expression protocol. The
Illumina TotalPrep-96 RNA Amplification Kit (Ambion/Applied Biosystems, Darmstadt, Germany) was used
for reverse transcription, and amplification with 500 ng of input total RNA (at 11ul). 700 ng of biotinylated
cRNA was hybridized to a BeadChip at 58°C for 16–17 hours. The expression data is available at GEO (Gene
Expression Omnibus) public repository under the accession GSE56045.
North American Brain Expression Consortium (NABEC) and United Kingdom Brain Expression Consortium
(UKBEC)
42
Frozen frontal cortex (FCTX) and cerebellum (CRBL) samples were obtained from > 399 selfreported European ancestry samples without determinable neuropathological evidence of disease 23,34-36.
mRNA expression levels were assayed using Illumina HumanHT-12 v3 Expression Beadchips. In brief,
individual probes were excluded from analyses if the p-value for detection was > 0.01 or there was less than
95% completeness of data per probe, and samples were excluded if <95% of probes were detected. Probes
were also removed if an analyzed SNP was within the probe or the probe mapped ambiguously to multiple
locations in the genome.
Expression data was quantile normalized and log2-transformed prior to analyses. Analyses were
carried out separately for each brain region. The total number of NABEC and UKBEC samples with good
quality whole-genome expression data was 394. The expression data is available at GEO (Gene Expression
Omnibus) public repository under the accession GSE36192.
For the methylation analysis, genomic DNA was extracted with phenol-chloroform. Bisulfite
converted DNA and assayed at > 27,000 sites on the Illumina Infinium HumanMethylation 27K BeadChips.
NIDDK-Phoenix Study (NIDDK/PHOENIX)
Subjects for the NIDDK-Phoenix study were selected from among participants in the Phoenix
extension of the Family Investigation of Nephropathy and Diabetes37. In this study, American Indians from
urban Phoenix, Arizona, are invited to have a screening examination for diabetes and nephropathy; beginning
in 2008 a PAXGene RNA tube (BD) was collected at each examination. Individuals for the present study were
selected among 1961 participants who had been fasting for ≥8 hours, who had been examined between 06:30
and 12:30 hours, and who did not have end-stage renal disease. The self-reported heritage of each individual
was ≥½ American Indian, and all participants were ≥ 18 years old. Information on family membership was
collected, and participants with diabetes or kidney disease were encouraged to refer family members. A total
of 1461 individuals were selected for expression studies: 768 from pedigrees with ≥2 individuals available,
and an additional 693, selected at random from the remaining potentially eligible individuals. Informed
consent was obtained from each participant, and the Institutional Review Board of the NIDDK approved the
study.
Total RNA was isolated using PAXGene Blood miRNA kits (Qiagen) according to the
manufacturer’s instructions. Samples were amplified and labelled (Ambion Message Ii Biotin-Enhanced
aRNA amplification kit), and hybridized to the Illumina HumanHT-12 v4 Expression Beadchips as described
by the manufacturer’s protocol. Samples were scanned on the Illumina BeadArray 500GX Reader and the
Illumina GenomeStudio software was used to perform a standard background normalization prior to exporting
the data for statistical analysis. Four samples (2 from the family sample and 2 from the random sample)
showed little evidence of overall expression above background levels and were excluded from analyses.
Expression studies for the NIDDK-Phoenix samples were performed at the Department of Genetics
Laboratories at Texas Biomedical Research Institute (San Antonio, Texas). The total number of NIDDKPhoenix samples with good quality whole-genome expression data was 1457. Data are not deposited in public
databases, but may be made available to potential collaborators, subject to IRB approval.
PBMC-MS
The PBMC-MS subjects were selected from the Comprehensive Longitudinal Investigation of
Multiple Sclerosis at the Brigham and Women's Hospital (CLMB), which has been described earlier 38.
PBMCs were collected between 2002 and 2007, and they were frozen and stored in liquid nitrogen. Total
RNA was isolated from RLT lysate using the RNeasy Mini kit (Qiagen) according to the manufacturer’s
instructions. After quality control (RIN >7), total RNA was amplified and labelled using the IVT RNA
Amplification and Labeling system (Affymetrix, Santa Clara, CA). The dataset was preprocessed with
SimpleAffy and quantile normalized following the GeneChip robust multiarray average (GCRMA) procedure
in Bioconductor 2.8 (www.bioconductor.org). The limma R package was used for differential expression
analysis39. Normalized data files and the .gct gene pattern compatible files were used in subsequent analyses.
The expression data is available at GEO (Gene Expression Omnibus) public repository under the accession
GSE16214.
Rotterdam Study (RS)
43
The Rotterdam Study (RS) (www.epib.nl/rotterdamstudy) is a prospective, population-based cohort
study in the district of Rotterdam, the Netherlands, and has been described in detail40. The initial design of the
study is straight-forward: a prospective cohort study among 7,983 persons living in the well-defined
Ommoord district in the city of Rotterdam (78% of 10,215 invitees), called Rotterdam Study I (or RS-I). They
were all 55 years of age or older and the oldest participant at the start was 106 years. The study started in the
second half of 1989. In 1999, 3,011 participants (out of 4,472 invitees) who had become 55 years of age or
moved into the study district since the start of the study were added to the cohort, called Rotterdam Study II
(or RS-II). In 2006, a further extension of the cohort was initiated in which 3,932 subjects were included, aged
45 years and older (out of 6,057 invited), called Rotterdam Study III (RS-III).
The participants were all examined in some detail at baseline. They were interviewed at home and
then had an extensive set of examinations in a specially built research facility in the centre of their district.
These examinations were repeated every 3–4 years in characteristics that could change over time. The
participants in the Rotterdam Study are followed for a variety of diseases that are frequent in the elderly.
Informed consent was obtained from each participant, and the medical ethics committee of the Erasmus
Medical Center Rotterdam approved the study.
For the expression analyses, the RS-III cohort was used: whole-blood was collected (PAXGene
Tubes – Becton Dickinson) and total RNA was isolated (PAXGene Blood RNA kits - Qiagen). To ensure a
constant high quality of the RNA preparations, all RNA samples were analysed using the Labchip GX
(Calliper) according to the manufacturer’s instructions. Samples with an RNA Quality Score > 7 were
amplified and labelled (Ambion TotalPrep RNA), and hybridized to the Illumina HumanHT12v4 Expression
Beadchips as described by the manufacturer’s protocol. Processing of the Rotterdam Study RNA samples was
performed at the Genetic Laboratory of Internal Medicine, Erasmus University Medical Center Rotterdam.
The RS-III expression dataset is available at GEO (Gene Expression Omnibus) public repository under the
accession GSE33828: 881 samples are available for analysis.
For the methylation analysis, genomic DNA was extracted from peripheral venous blood using the
salting-out method41. DNA methylation was assayed at over 450,000 sites on the Illumina Infinium
HumanMethylation 450K BeadChips. Quality control was performed in the R statistical programming
language using the minfi- and methylumi-package7,42. Total number of samples having both gene expression
and methylation data is 726.
San Antonio Family Heart Study (SAFHS)
The longitudinal San Antonio Family Heart Study (SAFHS, funded by the long-running NHLBI
program project 5P01HL04552, PI Blangero) started in 1991 and was designed to primarily investigate the
genetics of cardiovascular disease and its risk factors in Mexican Americans. The SAFHS included 1,431
individuals in 42 extended families at baseline. Ascertainment occurred by way of random selection of an
adult Mexican American proband, without regard to presence or absence of disease and almost exclusively
from Mexican American census tracts in San Antonio. These individuals have been followed in a mixed
longitudinal fashion, with the average participant having been seen ~2.5 times (ranging from 1 to 4 times). A
wide range of phenotypic information is available. Blood samples were obtained in the morning after an
overnight fast, and mRNA was isolated in lymphocytes only.
Expression profiles were generated for 1,371 lymphocyte samples (from the first clinic visit of
study participants, and subsequently stored at -80C w/o interruption before processing) in total, including
various controls and duplicates, using Illumina's WG6v1 microarrays (47,293 probes in total). This is an early
generation Illumina platform, which did not include all 2,238 age-associated genes for replication. We
identified "good" expression data samples based on the number of detected probes (at detection p-values <=
0.05), mean average raw signal across all transcripts, and mean correlation against all other samples across all
probes. Samples falling within the bottom 5% in each of these 3 quality measures were deleted, as were
controls. Among duplicate samples, we kept the one giving the "best" quality results based on these measures.
At the end of the day, this resulted in 1,244 samples with high quality expression data43. The gene expression
data was then processed by background noise subtraction, log2 transformation, and quantile normalization.
We used SOLAR44 to analyze what transcripts were associated with age. A random effects
"polygenic" model, based on the kinship matrix of study participants, was used to model the genetic nonindependence of family members based on their expected average autosomal sharing based on stated (and also
44
statistically verified) pedigree relationships, and age (at time of blood draw) was included as an additional
covariate in the analysis. The expression data is available at the ArrayExpress public repository under the
accession E-TABM-305.
Study of Health In Pomerania (SHIP-TREND)
SHIP (Study of Health in Pomerania) is a longitudinal population-based project consisting of two
independent cohorts, SHIP and SHIP-TREND, assessing the prevalence and incidence of common, population
relevant diseases and their risk factors. Baseline examinations for SHIP-TREND were conducted between
2008 and 2012. The study region of SHIP is West Pomerania, a region in the north-east of Germany.
Stratification variables for sampling from population registries were age and sex. Study design and sampling
methods were previously described45,46. A total number of 4420 Caucasian adults aged 20 to 79 years
(response 50.1%) participated in the baseline SHIP-TREND. The medical ethics committee of the University
of Greifswald approved the study protocol, and oral and written informed consents were obtained from all
study participants.
For this analysis, a subset of the SHIP-TREND cohort with available phenotype and gene
expression data (n=991) was used: RNA was prepared from whole blood under fasting conditions in
PAXGene tubes (BD) using the PAXGene Blood miRNA Kit (Qiagen, Hilden, Germany): this was done on a
QIAcube according to protocols provided by the manufacturer (Qiagen). To ensure a constant high quality of
the RNA preparations, all RNA samples were analysed using RNA 6000 Nano LabChips (Agilent
Technologies) on a 2100 Bioanalyzer (Agilent Technologies) according to the manufacturer’s instructions.
Using the Illumina TotalPrep-96 RNA Amp Kit (Ambion), 500ng of RNA was reverse transcribed into cRNA,
and biotin-UTP-labelled. 3000ng of cRNA were hybridized to the Illumina Whole-Genome Human HT12v3
Expression BeadChips, followed by washing steps as described in the Illumina protocol. Processing of the
SHIP-TREND RNA samples was performed at the Helmholtz Zentrum München. The expression data is
available at GEO (Gene Expression Omnibus) public repository under the accession GSE36382.
45
SUPPLEMENTARY NOTE 2
Additional acknowledgements
The infrastructure for the CHARGE Consortium is supported in part by the National Heart, Lung, and Blood
Institute grant R01HL105756. This study was funded by the European Commission (HEALTH-F2-2008201865, GEFOS; HEALTH-F2-2008 35627, TREAT-OA), the Netherlands Organization for Scientific
Research (NWO) Investments (nr. 175.010.2005.011, 911-03-012), the Netherlands Consortium for Healthy
Ageing9, the Netherlands Genomics Initiative (NGI) / Netherlands Organization for Scientific Research
(NWO) project nr. 050-060-810 and VIDI grant 917103521. Additionally, this work was supported by the
German Federal Ministry of Education and Research (BMBF) within the framework of the e:Med research
and funding concept (grant 01ZX1313A-2014).
BSGS
The Brisbane Systems Genetics Study (BSGS) is supported by the Australian National Health and
Medical Research Council (NHMRC) grants 389892, 496667, 613601, 1010374 and 1046880, the Australian
Research Council (ARC) grant (DE130100691), and by National Institutes of Health (NIH) grants GM057091
and GM099568. We also acknowledge Anthony Caracella and Lisa Bowdler for sample collection and
processing.
DILGOM
Dietary, Lifestyle, and Genetic determinants of Obesity and Metabolic syndrome study (DILGOM).
We thank the participants of the DILGOM study. Study was supported by Academy of Finland (DILGOM
grant # 118065, 140747 to I.H. 251217 to S.R., 139635 to V.S. and 283045, 266199 to J.K.), the
Finnish foundation for Cardiovascular Research to S.R., V.S. and M.P., the Sigrid Juselius Foundation to S.R.
and I.H. and Biocentrum Helsinki to S.R.
EGCUT
EGCUT received financing from FP7 programs (ENGAGE, OPENGENE), targeted financing from
Estonian Government SF0180142s08, Estonian Research Roadmap through Estonian Ministry of Education
and Research, Center of Excellence in Genomics (EXCEGEN) and University of Tartu (SP1GVARENG), and
from Estonian Research Council IUT2-2 grant and European Regional Development Fund. Also we
acknowledge EGCUT technical personnel, especially Mr V. Soo and S. Smit. Data analyses were carried out
in part in the High Performance Computing Center of University of Tartu.
FEHRMANN
This work is supported by the Netherlands Organization for Scientific Research [NWO-VENI grant
916.10.135 to LF], and a Horizon Breakthrough grant from the Netherlands Genomics Initiative [grant
92519031 to LF]. The research leading to these results has received funding from the European Community's
Health Seventh Framework Programme (FP7/2007–2013) under grant agreement n° 259867. This study was
financed in part by the SIA-raakPRO subsidy for project BioCOMP.
FHS
The National Heart, Lung, and Blood Institute's Framingham Heart Study is supported by NIH
grant NO1-HC-25195. The Systems Approach to Biomarker Research in Cardiovascular Disease (SABRe
CVD) Initiative is funded by the Division of Intramural Research, National Heart, Lung, and Blood Institute,
Bethesda, MD. Dr. J. M. Murabito is supported by R01 AG29451. Dr. R. Joehanes, D. Levy, P. Munson and
A.D. Johnson were supported by NHLBI Intramural Funds.
GARP
This study was supported by the Leiden University Medical Centre and the Dutch Arthritis
Association. Pfizer Inc., Groton, CT, USA supported the inclusion of the GARP study. The research leading
to these results has received funding from the European Union's Seventh Framework Programme (FP7/2007-
46
2011) under grant agreement n° 259679 and from BBMRI-NL, a research infrastructure financed by the Dutch
government: NWO 184.021.007.
GENOA
Support for the Genetic Epidemiology Network of Arteriopathy (GENOA) was provided by the
National Heart, Lung and Blood Institute of the National Institutes of Health (HL054464, HL054457,
HL054481, HL087660, and NS041558). We would also like to thank the families that participated in the
GENOA study.
GTP
This work was primarily supported by the National Institute of Mental Health (MH096764 and
MH071537 to K.J.R.). Support was also received from Emory and Grady Memorial Hospital General Clinical
Research Center, the Max Planck Society, the Behrens-Weise Foundation, NIH National Centers for Research
Resources (M01RR00039), and the National Center for Advancing Translational Sciences of the NIH
(UL1TR000454).
HVH
HVH was supported in part by grants R01 HL085251 and R01 HL073410 from the National Heart,
Lung, and Blood Institute (NHLBI). The provision of genomic data was supported in part by the National
Center for Advancing Translational Sciences, CTSI grant UL1TR000124, and National Institute of Diabetes
and Digestive and Kidney Disease Diabetes Research Center (DRC) grant DK063491 to the Southern
California Diabetes Research Center. The content is solely the responsibility of the authors and does not
necessarily represent the official views of the NHLBI or the National Institutes of Health, USA. Dr. Psaty
serves on a DSMB for a clinical trial of a device funded by Zoll LifeCor and on the Steering Committee for
the Yale Open Data Access Project funded by Johnson & Johnson. Both activities are unrelated to this work.
InCHIANTI
This study was supported in part by the Intramural Research Program, National Institute on Ageing.
UK based work was generously supported by a Wellcome Trust Institutional Strategic Support Award
(WT097835MF), plus internal University of Exeter Medical School funding. This work has made use of the
resources provided by the University of Exeter Science Strategy and resulting Systems Biology initiative.
The Jackson Laboratory
This work was supported by a Nathan Shock Center grant AG 25707 from the National Institute of
Ageing, NIH, USA and by an Ellison Medical Foundation Senior Investigator Award to Beverly Paigen. We
thank Scott Leiser and Matt Kaeberlein (University of Washington, Seattle, WA, USA) as well as Jarod
Rollins, Aric Rogers, and Dustin Updike (Mount Desert Island Biological Laboratory, Bar Harbor, ME, USA)
for useful discussion in resolving technical problems. C. elegans reagents and experiments were also
supported by NHLBI intramural funds from A.D.J.
KORA
The KORA research platform and the KORA Augsburg studies are financed by the Helmholtz
Zentrum München, German Research Center for Environmental Health, which is funded by the BMBF and by
the State of Bavaria. Furthermore, KORA research was supported within the Munich Center of Health
Sciences (MC Health), Ludwig Maximilians-Universität, as part of the LMUinnovative and by a grant from
the German Federal Ministry of Education and Research (BMBF) to the German Center for Diabetes Research
(DZD e. V.).This work was supported by the Ministry of Science and Research of the State of North RhineWestphalia (MIWF NRW) and the German Federal Ministry of Health (BMG).. Additional support was
obtained from the BMBF (National Genome Research Network NGFNplus Atherogenomics, 01GS0834), by
the DZHK (Deutsches Zentrum für Herz-Kreislauf-Forschung – German Centre for Cardiovascular Research)
and from the European Commission’s Seventh Framework Programme (FP7/2007-2013, HEALTH-F2-2011,
grant agreement No. 277984, TIRCON and HEALTH-F2-2013, grant agreement No. 603288, SysVasc). We
47
thank the field staff in Augsburg who was involved in the conduct of the studies. We thank Katja Junghans
and Anne Löschner (Helmholtz Zentrum München) for excellent technical assistance.
MESA
This research was supported by contracts N01-HC-from the National Heart, Lung and Blood
Institute and by grants UL1-RR-024156 and UL1-RR-025005 from the National Center for Research
Resources. The MESA Epigenomics & Transcriptomics Study was funded by NHLBI grant R01HL101250 to
Wake Forest University Health Sciences. The authors thank the other investigators, the staff, and the
participants of the MESA study for their valuable contributions. A full list of participating MESA
investigators and institutions can be found at http://www.mesa-nhlbi.org.
NABEC and UKBEC
The work performed by the North American Brain Expression Consortium (NABEC) was
supported in part by the Intramural Research Program of the National Institute on Ageing, National Institutes
of Health, part of the US Department of Health and Human Services; project number ZIA AG000932-04. In
addition this work was supported by a Research Grant from the Department of Defense, W81XWH-09-20128. This study utilized the high-performance computational capabilities of the Biowulf Linux cluster at the
National Institutes of Health, Bethesda, Md. (http://biowulf.nih.gov).
The work performed by the UK Brain Expression Consortium (UKBEC) was supported by the
MRC through the MRC Sudden Death Brain Bank (C.S.), by a Project Grant (G0901254 to J.H. and M.W.)
and by a Fellowship award (G0802462 to M.R.). D.T. was supported by the King Faisal Specialist Hospital
and Research Centre, Saudi Arabia. Computing facilities used at King's College London were supported by
the National Institute for Health Research (NIHR) Biomedical Research Centre based at Guy's and St Thomas'
NHS Foundation Trust and King's College London. We would like to thank AROS Applied Biotechnology
AS company laboratories and Affymetrix for their valuable input.
NIDDK/PHOENIX
This work was supported by the intramural research program of the National Institute of Diabetes
and Digestive and Kidney Diseases, Bethesda, MD.
PBMC-MC and the Boston Cohort (CD4+ and CD14+ cells)
T.R. is supported by the NIH F32 Fellowship (F32 AG043267). We thank all study participants in the
Phenogenetic project for their contributions.
RS
The Rotterdam Study is funded by Erasmus Medical Center and Erasmus University, Rotterdam,
Netherlands Organization for the Health Research and Development (ZonMw), the Netherlands Organisation
of Scientific Research NWO Investments (nr. 175.010.2005.011, 911-03-012), the Research Institute for
Diseases in the Elderly (014-93-015; RIDE2), the Ministry of Education, Culture and Science, the Ministry
for Health, Welfare and Sports, the European Commission (DG XII), and the Municipality of Rotterdam. The
authors are grateful to the study participants, the staff from the Rotterdam Study and the participating general
practitioners and pharmacists.
The generation and management of RNA-expression array data for the Rotterdam Study was
executed and funded by the Human Genotyping Facility of the Genetic Laboratory of the Department of
Internal Medicine, Erasmus MC, the Netherlands. We thank Ms. Mila Jhamai, Ms. Jeannette M. VergeerDrop, Ms. Bernadette van Ast-Copier, and Mr. Marijn Verkerk for their help in creating the RNA array
expression database.
SAFHS
SAFHS was supported in this effort by funding from R01AG031277 (SWB), P01HL045522 (JB),
R37MH059490 (JB) and the Azar Foundation (JB).
SHIP-TREND
48
SHIP is part of the Community Medicine Research net of the University of Greifswald, Germany,
which is funded by the Federal Ministry of Education and Research (grants no. 01ZZ9603, 01ZZ0103, and
01ZZ0403), the Ministry of Cultural Affairs as well as the Social Ministry of the Federal State of
Mecklenburg-West Pomerania, and the network ‘Greifswald Approach to Individualized Medicine
(GANI_MED)’ funded by the Federal Ministry of Education and Research (grant 03IS2061A). Genome-wide
data have been supported by the Federal Ministry of Education and Research (grant no. 03ZIK012) and a joint
grant from Siemens Healthcare, Erlangen, Germany and the Federal State of Mecklenburg, West Pomerania.
The University of Greifswald is a member of the 'Center of Knowledge Interchange' program of the Siemens
AG and the Caché Campus program of the InterSystems GmbH.
Individuals not attached to cohorts
AZ is supported by “IN-CONTROL” grant by Cardiovascular Research Netherlands (CVON), and
from Rosalind Franklin Fellowship, University of Groningen, the Netherlands.
The authors are very grateful to the participants, the staff, the general practitioners, and the pharmacist from
all participating studies.
49
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51
Supplementary.Data.1.Peters
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38259
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y
y
y
y
y
y
y
y
y
NEW-Entrez-ID
57124
54674
4753
51176
1236
3983
2999
4609
939
399665
5270
117247
8857
9289
60468
23208
5152
9241
2317
4907
83888
7049
81618
80063
1380
9214
26227
3945
55423
343413
5150
51070
10606
28969
92106
1524
6322
6146
26119
389
4050
54463
81606
11098
203328
113791
4240
79814
4818
5521
3002
9057
55020
3615
10750
4925
2091
79899
6304
3575
65982
154
3820
3326
29802
6932
114879
3512
81563
64919
9397
8718
5796
121551
10913
6785
3956
26249
926
26960
9891
220158
80310
301
164668
472
3399
91523
22837
51237
2841
95681
2113
150864
2053
814
255231
1235
7294
23484
8942
2149
5551
1736
9254
10252
493
2308
79148
5641
8832
79961
23059
132299
3001
973
5159
11123
27075
51361
57189
79896
471
79612
3486
64420
940
6097
25788
57134
55342
6894
55024
1316
3824
6955
348378
10360
9839
10791
7710
1606
2648
5450
2041
7169
708
NEW-Gene-ID
CD248
LRRN3
NELL2
LEF1
CCR7
ABLIM1
GZMH
MYC
CD27
FAM102A
SERPINE2
SLC16A10
FCGBP
GPR56
BACH2
SYT11
PDE9A
NOG
FLNB
NT5E
FGFBP2
TGFBR3
ITM2C
ATF7IP2
CR2
FAIM3
PHGDH
LDHB
SIRPG
FCRL6
PDE7A
NOSIP
PAICS
BZW2
OXNAD1
CX3CR1
SCML1
RPL22
LDLRAP1
RHOC
LTB
FAM134B
LBH
PRSS23
SUSD3
PIK3IP1
MFGE8
AGMAT
NKG7
PPP2R2B
GZMB
SLC7A6
TTC38
IMPDH2
GRAP
NUCB2
FBL
PRR5L
SATB1
IL7R
ZSCAN18
ADRB2
KLRB1
HSP90AB1
VPREB3
TCF7
OSBPL5
IGJ
C1orf21
BCL11B
NMT2
TNFRSF25
PTPRK
BTBD11
EDAR
ELOVL4
LGALS1
KLHL3
CD8B
NBEA
NUAK1
GTSCR1
PDGFD
ANXA1
APOBEC3H
ATM
ID3
PCED1B
COBLL1
MZB1
GPR18
CEP41
ETS1
FAM117B
EPHX2
CAMK4
MCOLN2
CCR6
TXK
LEPROTL1
KYNU
F2R
PRF1
DKC1
CACNA2D2
SPRY1
ATP2B4
FOXO1
MMP28
LGMN
CD84
DENND2D
CLUAP1
OCIAD2
GZMA
CD79A
PDGFRB
RCAN3
TSPAN13
HOOK1
KIAA1147
THNSL1
ATIC
NAA16
IGFBP3
SUSD1
CD28
RORC
RAD54B
MAN1C1
STRBP
TARBP1
BANK1
KLF6
KLRD1
TRA@
FAM159A
NPM3
ZEB2
VAMP5
ZNF154
DGKA
KAT2A
POU2AF1
EPHA1
TPM2
C1QBP
DISC: WB
------------------------------++-+++
------------------?-----------++-+++
-----++-+++
--------------------++++++
++++++
-----------------------------------++++++
-------------------------+++?++
---------------++++++
---------------++++++
---?----------------++-+++
++-+++
++++++
-----++++++
------------+-------++++++
---------------++++++
--------------------++++++
-----++++++
---?-------------------------------++++++
---------------++++++
++++++
++++++
++++++
++-+++
-----------------------?-------------------------------++-+++
---?-----------++++++
++++++
++-+++
-----++++++
-----++-+++
---------------++-+++
---------------++-+++
---?-++++++
--------------------------------+--++-+++
++++++
-----------------------------------++++++
++++++
---?-----------+
++++++
++++++
------------------------------------
Weight
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
Zscore
-32.476
-29.119
-23.650
-22.178
-21.138
-22.321
18.681
-18.964
-17.647
-19.464
-16.077
-20.385
-15.764
17.524
-17.824
17.225
-17.210
-17.006
-15.780
-17.453
17.449
14.997
-14.414
-15.515
-16.293
-17.917
-13.249
-15.633
-15.636
13.285
-15.584
-14.435
-16.001
-14.927
-15.586
14.094
-13.999
-14.906
-14.573
12.894
-14.895
-15.167
-14.176
14.071
-14.258
-14.933
-12.460
-13.765
14.434
13.489
14.190
-15.235
13.878
-14.089
-14.824
-12.039
-13.815
13.690
-13.046
-16.737
-13.576
13.205
-13.010
-14.161
-12.905
-13.330
13.939
-8.883
11.889
-13.517
-14.499
-13.869
-12.737
-12.171
-13.062
-14.909
13.568
-13.185
-11.084
-10.843
15.281
10.450
12.147
11.425
11.567
-13.685
-11.836
-13.304
-12.922
-9.708
-13.679
-13.480
-13.493
-12.098
-12.692
-14.466
10.173
-13.806
-11.805
-12.769
12.767
12.787
11.509
-13.417
11.259
-13.530
11.622
-12.571
-14.522
-11.544
10.260
-14.258
-13.254
-13.317
11.425
-10.010
13.868
-11.930
-12.035
-13.054
-14.162
-12.087
-11.665
-10.012
8.426
12.088
-14.157
-12.012
-10.353
-10.499
-11.768
-10.079
-12.184
10.661
12.142
-13.632
-12.508
-9.514
12.459
12.649
-12.344
-13.564
-9.395
-9.201
-12.169
-11.842
-11.398
Direction
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
-
P
2.32E-231
2.03E-186
1.18E-123
5.57E-109
3.59E-99
2.34E-110
7.03E-78
3.36E-80
1.07E-69
2.24E-84
3.71E-58
2.29E-92
5.50E-56
9.47E-69
4.64E-71
1.72E-66
2.22E-66
7.41E-65
4.26E-56
3.29E-68
3.51E-68
7.73E-51
4.24E-47
2.73E-54
1.10E-59
8.65E-72
4.56E-40
4.33E-55
4.16E-55
2.83E-40
9.40E-55
3.12E-47
1.26E-57
2.19E-50
9.09E-55
4.14E-45
1.58E-44
3.03E-50
4.19E-48
4.89E-38
3.55E-50
5.88E-52
1.29E-45
5.76E-45
4.01E-46
2.02E-50
1.23E-35
4.14E-43
3.17E-47
1.81E-41
1.06E-45
2.07E-52
8.64E-44
4.44E-45
1.02E-49
2.22E-33
2.07E-43
1.16E-42
6.66E-39
7.07E-63
5.56E-42
8.18E-40
1.08E-38
1.59E-45
4.22E-38
1.55E-40
3.69E-44
6.52E-19
1.35E-32
1.24E-41
1.24E-47
9.70E-44
3.69E-37
4.44E-34
5.44E-39
2.90E-50
6.17E-42
1.07E-39
1.50E-28
2.15E-27
1.02E-52
1.46E-25
5.99E-34
3.13E-30
6.04E-31
1.25E-42
2.55E-32
2.18E-40
3.40E-38
2.77E-22
1.35E-42
2.04E-41
1.73E-41
1.08E-33
6.52E-37
1.98E-47
2.63E-24
2.34E-43
3.67E-32
2.44E-37
2.50E-37
1.93E-37
1.19E-30
4.81E-41
2.08E-29
1.05E-41
3.19E-31
3.06E-36
8.79E-48
7.94E-31
1.06E-24
3.98E-46
4.27E-40
1.84E-40
3.14E-30
1.38E-23
9.90E-44
8.23E-33
2.32E-33
6.06E-39
1.58E-45
1.24E-33
1.92E-31
1.36E-23
3.58E-17
1.23E-33
1.69E-45
3.07E-33
4.04E-25
8.69E-26
5.70E-32
6.87E-24
3.78E-34
1.55E-26
6.33E-34
2.57E-42
6.71E-36
1.84E-21
1.25E-35
1.13E-36
5.26E-35
6.53E-42
5.70E-21
3.54E-20
4.54E-34
2.36E-32
4.30E-30
Correlation-with-DISCOVERY:
REPL: WB
Weight
-------8009
-------8009
-------8009
-------8009
-------8009
-------8009
+++-++++
8009
-------8009
-------8009
-------8009
-------8009
------?6552
-------8009
++++++++
8009
-------8009
++++++++
8009
-------8009
-------8009
-------8009
-----?-7782
+++-++++
8009
++++++++
8009
-------8009
-------8009
-------8009
-------8009
-------8009
-------8009
-------8009
+++-++++
8009
-------8009
-------8009
-------8009
-------8009
-------8009
++++++++
8009
-------8009
-------8009
-------8009
++++++++
8009
-------8009
-------8009
-------8009
+++-++++
8009
-------8009
-------8009
-------8009
-------8009
++++++++
8009
++++++++
8009
++++++++
8009
-------8009
+++-++++
8009
-------8009
-------8009
-------8009
-------8009
++++++++
8009
-------8009
-------8009
-------8009
++++++++
8009
-------8009
-------8009
---+---8009
-------8009
++++++++
8009
-------8009
++++++?+
6552
-------8009
-------8009
-------8009
-----??6325
-------8009
-------8009
-------8009
++++++++
8009
-------8009
----+--8009
+---???6204
++++++++
8009
++++++++
8009
8009
+++-++++
++++--++
8009
++++++++
8009
-------8009
-------8009
-------8009
-------8009
----+--8009
-------8009
-------8009
-------8009
-------8009
-----+-8009
+----+-8009
++++++++
8009
---+--+8009
-----+-8009
-------8009
++++++++
8009
++++++++
8009
++++++++
8009
-------8009
++++++++
8009
-------8009
++++++++
8009
-------8009
-----??6325
-------8009
++++++++
8009
-?-----7497
-------8009
-------8009
++++++++
8009
---+---8009
-+++++++
8009
-------8009
-------8009
-------8009
-------8009
-----+-8009
-------8009
----+--8009
++++--++
8009
++++++++
8009
-------8009
-------8009
-------8009
-------8009
---+---8009
-------8009
-------8009
++++++++
8009
+++-++++
8009
-------8009
-------8009
-------8009
++++--++
8009
++++++++
8009
-------8009
-------8009
-------8009
-------8009
-------8009
-------8009
-------8009
0.972
Zscore
-40.13
-33.55
-23.48
-22.46
-22.44
-20.73
20.97
-19.51
-20.68
-18.68
-20.95
-16.51
-20.83
19.02
-17.75
18.23
-18.20
-17.52
-18.61
-16.59
15.79
17.66
-17.73
-16.61
-15.85
-14.22
-18.30
-15.96
-15.45
17.65
-15.37
-16.19
-14.34
-15.18
-14.32
15.66
-15.69
-14.79
-14.82
15.93
-14.02
-13.43
-14.22
14.07
-13.91
-13.13
-15.34
-14.09
13.42
14.26
13.56
-12.50
13.62
-13.34
-12.56
-15.18
-13.15
13.13
-13.72
-10.17
-12.96
13.28
-13.46
-12.36
-13.55
-13.04
12.37
-17.12
14.24
-12.61
-11.59
-12.12
-13.18
-13.29
-12.40
-10.55
11.66
-12.02
-13.91
-14.22
9.75
14.31
12.66
13.33
13.13
-11.09
-12.74
-11.33
-11.67
-14.53
-10.82
-10.84
-10.74
-12.01
-11.44
-9.74
13.77
-10.45
-12.17
-11.22
11.19
11.17
12.37
-10.44
12.45
-10.26
11.92
-11.01
-8.80
-11.96
13.17
-9.21
-10.23
-10.15
11.90
-13.12
9.52
-11.24
-11.13
-10.15
-9.09
-11.03
-11.41
-12.93
14.43
10.93
-8.88
-10.83
-12.31
-12.14
-10.93
-12.53
-10.51
11.94
10.48
-9.17
-10.04
-12.89
10.03
9.82
-10.09
-8.92
-12.81
-12.98
-10.11
-10.38
-10.70
Direction
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
-
META
P
META: Weight
4.07e-352
15266
7.81E-247
15266
6.93E-122
15266
9.38E-112
15266
1.48E-111
15266
1.71E-95
15266
1.26E-97
15266
9.94E-85
15266
5.13E-95
15266
7.11E-78
15266
1.91E-97
14385
3.15E-61
13809
2.49E-96
15266
1.21E-80
15266
1.85E-70
15266
3.24E-74
15266
5.44E-74
15266
9.87E-69
15266
2.87E-77
15266
8.23E-62
15039
3.51E-56
15266
9.15E-70
15266
2.45E-70
15266
5.85E-62
15266
1.51E-56
15266
7.40E-46
15266
8.10E-75
15266
2.42E-57
15266
7.71E-54
15266
9.90E-70
15266
2.68E-53
15266
5.74E-59
15266
1.29E-46
15266
4.55E-52
15266
1.71E-46
15266
3.04E-55
14385
1.92E-55
15266
1.79E-49
15266
1.15E-49
15266
3.71E-57
15266
1.11E-44
15266
3.96E-41
15266
7.04E-46
15266
6.25E-45
15266
5.30E-44
14385
2.16E-39
15266
4.09E-53
15266
4.34E-45
15266
4.53E-41
15266
4.19E-46
15266
6.69E-42
15266
7.42E-36
15266
3.21E-42
15266
1.34E-40
15266
3.40E-36
15266
4.94E-52
15266
1.68E-39
15266
2.23E-39
15266
7.38E-43
15266
2.85E-24
15266
2.11E-38
15266
3.02E-40
15266
2.55E-41
15266
4.30E-35
15266
8.47E-42
15266
7.46E-39
15266
3.98E-35
15266
1.08E-65
15266
5.42E-46
13809
1.86E-36
14385
4.47E-31
15266
8.39E-34
15266
1.23E-39
13582
2.82E-40
15266
2.54E-35
15266
5.24E-26
15266
2.09E-31
15266
2.96E-33
15266
5.20E-44
15266
7.19E-46
13461
1.86E-22
15266
1.97E-46
15266
1.05E-36
15266
1.53E-40
15266
2.10E-39
15266
1.41E-28
15266
3.50E-37
15266
9.21E-30
15266
1.92E-31
15266
7.66E-48
14385
2.71E-27
15266
2.24E-27
15266
6.64E-27
15266
3.27E-33
15266
2.63E-30
15266
2.15E-22
15266
3.79E-43
15266
1.49E-25
14385
4.50E-34
15266
3.29E-29
15266
4.35E-29
15266
5.57E-29
15266
3.63E-35
15266
1.65E-25
15266
1.48E-35
15266
1.04E-24
15266
9.77E-33
15266
3.43E-28
15266
1.33E-18
13582
5.89E-33
15266
1.26E-39
15266
3.43E-20
14754
1.48E-24
15266
3.40E-24
15266
1.23E-32
15266
2.39E-39
14385
1.81E-21
15266
2.59E-29
15266
8.75E-29
15266
3.18E-24
15266
1.03E-19
15266
2.86E-28
15266
3.82E-30
15266
3.18E-38
15266
3.63E-47
15266
8.32E-28
15266
6.84E-19
15266
2.49E-27
15266
8.51E-35
15266
6.70E-34
15266
8.64E-28
15266
4.86E-36
15266
7.50E-26
15266
7.30E-33
15266
1.10E-25
15266
4.63E-20
14385
9.91E-24
15266
4.93E-38
15266
1.14E-23
15266
9.64E-23
15266
6.08E-24
15266
4.81E-19
15266
1.38E-37
15266
1.64E-38
15266
4.96E-24
15266
3.03E-25
15266
9.75E-27
15266
META: Zscore
-51.458
-44.381
-33.311
-31.562
-30.83
-30.407
28.068
-27.203
-27.147
-26.95
-26.335
-26.149
-25.954
25.857
-25.142
25.077
-25.046
-24.416
-24.357
-24.057
23.469
23.128
-22.78
-22.729
-22.711
-22.65
-22.391
-22.339
-21.97
21.945
-21.876
-21.681
-21.416
-21.29
-21.116
21.065
-21.013
-20.987
-20.779
20.431
-20.428
-20.185
-20.073
19.889
-19.873
-19.807
-19.702
-19.697
19.673
19.625
19.607
-19.558
19.431
-19.377
-19.32
-19.294
-19.05
18.949
-18.935
-18.902
-18.746
18.724
-18.722
-18.716
-18.708
-18.634
18.567
-18.524
18.425
-18.408
-18.393
-18.34
-18.301
-18.014
-17.989
-17.918
17.799
-17.793
-17.72
-17.613
17.597
17.568
17.541
17.533
17.488
-17.468
-17.389
-17.38
-17.358
-17.306
-17.27
-17.145
-17.081
-17.038
-17.037
-17.025
16.988
-16.988
-16.954
-16.93
16.911
16.909
16.897
-16.812
16.778
-16.761
16.644
-16.642
-16.622
-16.62
16.616
-16.561
-16.547
-16.532
16.494
-16.457
16.454
-16.367
-16.361
-16.355
-16.345
-16.32
-16.306
-16.265
16.257
16.25
-16.191
-16.126
-16.051
-16.03
-16.028
-16.027
-16.015
15.999
15.96
-15.92
-15.898
-15.898
15.854
15.831
-15.819
-15.81
-15.759
-15.744
-15.713
-15.684
-15.611
META:Direction
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
-
META: P
1.62e-577
3.53e-430
2.67E-243
1.22E-218
1.04E-208
4.41E-203
2.39E-173
5.96E-163
2.76E-162
5.68E-160
7.66E-153
1.00E-150
1.65E-148
2.03E-147
1.71E-139
8.82E-139
1.91E-138
1.16E-131
4.94E-131
6.98E-128
8.43E-122
2.41E-118
7.22E-115
2.34E-114
3.49E-114
1.41E-113
4.85E-111
1.55E-110
5.58E-107
9.70E-107
4.42E-106
3.13E-104
9.39E-102
1.42E-100
5.66E-99
1.67E-98
5.02E-98
8.61E-98
6.69E-96
8.94E-93
9.52E-93
1.31E-90
1.28E-89
5.11E-88
6.90E-88
2.58E-87
2.06E-86
2.31E-86
3.67E-86
9.40E-86
1.35E-85
3.50E-85
4.25E-84
1.21E-83
3.64E-83
6.02E-83
6.51E-81
4.50E-80
5.87E-80
1.10E-79
2.08E-78
3.18E-78
3.29E-78
3.64E-78
4.22E-78
1.70E-77
5.91E-77
1.33E-76
8.24E-76
1.13E-75
1.49E-75
3.94E-75
8.17E-75
1.51E-72
2.38E-72
8.47E-72
7.20E-71
7.95E-71
2.92E-70
1.95E-69
2.58E-69
4.32E-69
6.99E-69
8.01E-69
1.75E-68
2.53E-68
1.00E-67
1.16E-67
1.71E-67
4.20E-67
7.92E-67
6.80E-66
2.04E-65
4.29E-65
4.34E-65
5.37E-65
1.00E-64
1.01E-64
1.80E-64
2.71E-64
3.75E-64
3.88E-64
4.70E-64
2.01E-63
3.57E-63
4.68E-63
3.35E-62
3.48E-62
4.79E-62
4.95E-62
5.38E-62
1.33E-61
1.69E-61
2.17E-61
4.04E-61
7.47E-61
7.89E-61
3.29E-60
3.63E-60
4.02E-60
4.72E-60
7.13E-60
9.00E-60
1.74E-59
1.98E-59
2.22E-59
5.84E-59
1.67E-58
5.62E-58
7.86E-58
8.18E-58
8.21E-58
9.96E-58
1.30E-57
2.42E-57
4.61E-57
6.53E-57
6.54E-57
1.32E-56
1.91E-56
2.29E-56
2.63E-56
5.98E-56
7.58E-56
1.22E-55
1.95E-55
6.10E-55
Correlation-with-META:
-0.010
REPL-cerebellum Weight Effect
?
0
ns
+
394
0.005
394
-0.006
?
0
ns
?
0
ns
+
394
0.004
?
0
ns
?
0
ns
?
0
ns
+
394
0.003
394
-0.007
+
394
0.008
?
0
ns
?
0
ns
394
-0.002
394
-0.007
-0.002
394
?
0
ns
394
-0.005
?
0
ns
?
0
ns
+
394
0.001
+
394
0.001
?
0
ns
?
0
ns
?
0
ns
394
-0.003
394
-0.007
?
0
ns
?
0
ns
?
0
ns
394
0.000
+
394
0.001
394
-0.014
?
0
ns
?
0
ns
?
0
ns
394
-0.002
+
394
0.004
+
394
0.001
?
0
ns
394
-0.004
?
0
ns
?
0
ns
?
0
ns
+
394
0.009
394
-0.002
?
0
ns
?
0
ns
394
-0.008
?
0
ns
+
394
0.009
+
394
0.003
394
-0.004
?
0
ns
394
-0.010
+
394
0.007
?
0
ns
?
0
ns
?
0
ns
?
0
ns
?
0
ns
?
0
ns
+
394
0.000
?
0
ns
?
0
ns
+
394
0.009
?
0
ns
+
394
0.015
?
0
ns
+
394
0.005
+
394
0.014
394
-0.016
394
-0.003
?
0
ns
394
-0.002
+
394
0.003
+
394
0.005
?
0
ns
394
-0.008
394
-0.004
?
0
ns
?
0
ns
394
-0.002
?
0
ns
?
0
ns
394
-0.001
?
0
ns
+
394
0.000
?
0
ns
?
0
ns
394
-0.016
394
-0.005
+
394
0.006
+
394
0.005
?
0
ns
?
0
ns
?
0
ns
?
0
ns
394
-0.005
?
0
ns
?
0
ns
?
0
ns
?
0
ns
+
394
0.006
394
-0.011
+
394
0.002
+
394
0.001
?
0
ns
394
-0.010
?
0
ns
?
0
ns
394
-0.004
394
0.000
?
0
ns
?
0
ns
+
394
0.001
?
0
ns
394
-0.008
+
394
0.008
394
-0.015
+
394
0.000
394
0.000
+
394
0.000
?
0
ns
?
0
ns
?
0
ns
?
0
ns
?
0
ns
+
394
0.004
394
-0.016
394
-0.001
?
0
ns
394
-0.008
?
0
ns
?
0
ns
?
0
ns
+
394
0.002
394
-0.010
394
-0.003
?
0
ns
?
0
ns
+
394
0.007
?
0
ns
?
0
ns
+
394
0.009
394
-0.010
SE
ns
0.004
0.003
ns
ns
0.003
ns
ns
ns
0.004
0.003
0.004
ns
ns
0.004
0.003
0.003
ns
0.003
ns
ns
0.003
0.003
ns
ns
ns
0.003
0.003
ns
ns
ns
0.003
0.003
0.003
ns
ns
ns
0.003
0.003
0.003
ns
0.003
ns
ns
ns
0.003
0.003
ns
ns
0.003
ns
0.003
0.003
0.003
ns
0.003
0.003
ns
ns
ns
ns
ns
ns
0.003
ns
ns
0.003
ns
0.003
ns
0.003
0.003
0.003
0.003
ns
0.003
0.003
0.003
ns
0.003
0.003
ns
ns
0.004
ns
ns
0.003
ns
0.004
ns
ns
0.003
0.003
0.003
0.003
ns
ns
ns
ns
0.003
ns
ns
ns
ns
0.003
0.003
0.003
0.003
ns
0.004
ns
ns
0.003
0.003
ns
ns
0.003
ns
0.003
0.003
0.003
0.003
0.003
0.003
ns
ns
ns
ns
ns
0.003
0.003
0.003
ns
0.003
ns
ns
ns
0.003
0.003
0.004
ns
ns
0.003
ns
ns
0.003
0.003
P
ns
1.29E-01
6.23E-02
ns
ns
1.96E-01
ns
ns
ns
4.65E-01
2.31E-02
1.66E-02
ns
ns
6.08E-01
2.94E-02
5.55E-01
ns
9.10E-02
ns
ns
6.67E-01
8.18E-01
ns
ns
ns
3.91E-01
6.91E-03
ns
ns
ns
9.23E-01
8.20E-01
3.49E-06
ns
ns
ns
5.90E-01
2.45E-01
6.88E-01
ns
2.71E-01
ns
ns
ns
1.57E-03
6.21E-01
ns
ns
5.39E-03
ns
1.03E-02
2.80E-01
1.51E-01
ns
1.04E-04
2.99E-02
ns
ns
ns
ns
ns
ns
8.94E-01
ns
ns
5.64E-03
ns
1.47E-06
ns
9.09E-02
4.61E-07
1.16E-06
3.60E-01
ns
5.28E-01
4.12E-01
1.20E-01
ns
1.42E-02
1.99E-01
ns
ns
5.53E-01
ns
ns
7.12E-01
ns
9.04E-01
ns
ns
2.50E-06
1.31E-01
8.25E-02
1.25E-01
ns
ns
ns
ns
8.01E-02
ns
ns
ns
ns
7.77E-02
1.03E-03
5.33E-01
8.18E-01
ns
4.22E-03
ns
ns
2.05E-01
9.95E-01
ns
ns
7.44E-01
ns
1.59E-02
1.33E-02
5.73E-07
9.26E-01
9.35E-01
9.67E-01
ns
ns
ns
ns
ns
2.03E-01
6.99E-08
7.30E-01
ns
2.02E-02
ns
ns
ns
6.15E-01
4.03E-03
3.82E-01
ns
ns
3.97E-02
ns
ns
6.40E-03
6.33E-04
Correlation-with-META:
REPL-frontalcortex
Weight
?
0
394
394
?
0
?
0
+
394
?
0
?
0
?
0
+
394
394
394
+
394
?
0
?
0
394
394
?
0
+
394
?
0
?
0
+
394
394
394
?
0
?
0
+
394
394
?
0
?
0
?
0
+
394
+
394
394
?
0
?
0
?
0
394
?
0
+
394
?
0
+
394
394
?
0
?
0
+
394
+
394
?
0
?
0
394
?
0
+
394
?
0
+
394
?
0
394
+
394
+
394
?
0
?
0
?
0
?
0
?
0
394
?
0
?
0
+
394
?
0
394
394
394
+
+
394
+
394
394
?
0
394
+
394
+
394
?
0
394
394
?
0
?
0
+
394
?
0
?
0
+
394
?
0
+
394
?
0
?
0
394
394
+
394
?
0
?
0
?
0
?
0
?
0
394
?
0
?
0
?
0
?
0
+
394
394
+
394
+
394
394
394
?
0
?
0
394
394
?
0
?
0
+
394
?
0
394
+
394
+
394
+
394
+
394
?
0
+
394
394
?
0
?
0
?
0
+
394
394
+
394
?
0
394
?
0
?
0
?
0
394
+
394
+
394
?
0
?
0
+
394
?
0
?
0
+
394
394
0.080
Effect
ns
-0.008
-0.008
ns
ns
0.007
ns
ns
ns
0.012
-0.017
-0.009
0.008
ns
ns
-0.007
-0.002
ns
0.014
ns
ns
0.009
0.000
-0.011
ns
ns
0.013
-0.012
ns
ns
ns
0.006
0.014
-0.018
ns
ns
ns
-0.013
ns
0.006
ns
0.003
-0.014
ns
ns
0.015
0.004
ns
ns
-0.008
ns
0.004
ns
0.006
ns
-0.003
0.011
0.006
ns
ns
ns
ns
ns
0.000
ns
ns
0.002
ns
-0.009
-0.006
0.006
0.015
0.007
0.000
ns
-0.007
0.001
0.006
ns
-0.014
-0.002
ns
ns
0.004
ns
ns
0.006
ns
0.005
ns
ns
-0.007
-0.005
0.007
ns
ns
ns
ns
ns
-0.001
ns
ns
ns
ns
0.004
-0.007
0.004
0.005
-0.006
-0.016
ns
ns
-0.002
-0.005
ns
ns
0.007
ns
-0.007
0.003
0.002
0.001
0.007
ns
0.005
-0.011
ns
ns
ns
0.003
-0.014
0.001
ns
-0.007
ns
ns
ns
-0.018
0.005
0.009
ns
ns
0.010
ns
ns
0.003
-0.007
SE
ns
0.003
0.003
ns
ns
0.003
ns
ns
ns
0.004
0.003
0.004
0.003
ns
ns
0.003
0.004
ns
0.003
ns
ns
0.003
0.003
0.003
ns
ns
0.003
0.003
ns
ns
ns
0.003
0.003
0.003
ns
ns
ns
0.003
ns
0.003
ns
0.003
0.003
ns
ns
0.003
0.004
ns
ns
0.003
ns
0.003
ns
0.003
ns
0.003
0.003
0.004
ns
ns
ns
ns
ns
0.003
ns
ns
0.003
ns
0.004
0.003
0.003
0.003
0.003
0.003
ns
0.004
0.003
0.003
ns
0.003
0.003
ns
ns
0.003
ns
ns
0.003
ns
0.003
ns
ns
0.003
0.003
0.003
ns
ns
ns
ns
ns
0.003
ns
ns
ns
ns
0.003
0.003
0.003
0.003
0.003
0.003
ns
ns
0.003
0.003
ns
ns
0.003
ns
0.003
0.003
0.003
0.003
0.003
ns
0.003
0.003
ns
ns
ns
0.003
0.003
0.003
ns
0.003
ns
ns
ns
0.003
0.003
0.003
ns
ns
0.003
ns
ns
0.003
0.003
P
ns
1.89E-02
2.46E-02
ns
ns
3.67E-02
ns
ns
ns
9.15E-04
1.72E-06
1.52E-02
2.41E-03
ns
ns
2.48E-02
5.93E-01
ns
1.83E-05
ns
ns
2.22E-03
9.68E-01
1.31E-03
ns
ns
2.23E-04
1.56E-06
ns
ns
ns
1.03E-01
4.02E-06
4.37E-09
ns
ns
ns
7.26E-05
ns
4.10E-02
ns
3.72E-01
1.70E-06
ns
ns
2.65E-07
3.11E-01
ns
ns
1.13E-02
ns
1.82E-01
ns
6.50E-02
ns
1.90E-01
1.38E-03
7.84E-02
ns
ns
ns
ns
ns
9.86E-01
ns
ns
4.61E-01
ns
1.26E-02
6.75E-02
4.64E-02
6.01E-07
4.45E-02
8.92E-01
ns
5.90E-02
6.82E-01
8.54E-02
ns
1.20E-05
5.76E-01
ns
ns
2.59E-01
ns
ns
3.37E-02
ns
1.53E-01
ns
ns
4.12E-02
1.38E-01
1.97E-02
ns
ns
ns
ns
ns
7.96E-01
ns
ns
ns
ns
2.65E-01
5.31E-02
2.29E-01
9.84E-02
6.55E-02
3.55E-07
ns
ns
6.15E-01
1.01E-01
ns
ns
1.33E-02
ns
3.35E-02
3.28E-01
6.04E-01
7.55E-01
1.57E-02
ns
1.02E-01
6.90E-04
ns
ns
ns
4.13E-01
5.61E-05
6.34E-01
ns
2.28E-02
ns
ns
ns
3.43E-09
9.23E-02
9.98E-03
ns
ns
2.33E-03
ns
ns
2.63E-01
3.62E-02
Correlation-with-META:
REPL-CD4+
Weight
-515
?213
?213
?213
-515
-515
++
515
?213
-515
-515
-515
-515
-+
515
?+
213
?213
++
515
-515
-515
-515
-515
++
515
?+
213
-515
-515
-515
-515
-515
-515
+515
?+
213
-515
-515
-515
-515
?
0
++
515
-?
302
-515
-515
++
515
-515
-515
-515
++
515
-515
-515
-515
?213
++
515
++
515
++
515
-515
+?
302
+515
-515
-515
-515
+?
302
-515
-515
?213
++
515
-515
?213
?+
213
-+
515
+515
-515
?+
213
-+
515
-515
-+
515
?213
-515
-515
-515
++
515
-515
+515
?213
?+
213
++
515
++
515
++
515
++
515
-515
-+
515
++
515
-515
-+
515
++
515
-515
?213
-515
-515
?213
++
515
?+
213
-515
-515
+515
++
515
++
515
?
0
++
515
?213
?+
213
++
515
-515
-515
++
515
-515
+515
-515
++
515
-515
?213
-515
-515
-515
-515
+515
+515
-?
302
++
515
+515
+515
-+
515
-515
+515
-515
-515
-515
++
515
++
515
-?
302
-515
-+
515
++
515
++
515
-515
+515
-515
?+
213
++
515
-515
-515
0.671
Zscore
-3.445
-3.670
-0.219
-2.050
-5.730
-4.260
5.407
-1.314
-2.038
-3.835
-8.556
-5.047
-3.288
2.954
-2.231
5.127
-6.337
-3.835
-10.805
-2.629
4.147
4.089
-3.162
-3.169
-6.384
-1.392
-6.999
-1.967
0.496
3.681
-2.387
-2.215
-3.315
-3.756
ns
3.764
-2.646
-0.952
-1.535
4.002
-0.675
-2.619
-1.954
3.747
-3.414
-3.803
-1.011
-2.364
5.414
6.609
4.007
-3.210
2.605
-0.784
-3.215
-6.077
-3.146
2.881
-4.362
-0.868
-0.430
4.108
-2.137
-1.717
0.341
-0.814
1.060
-3.212
2.430
-0.404
-2.006
0.190
-4.970
-3.709
-4.582
-1.671
7.686
-2.745
-1.075
-4.086
0.421
8.156
2.024
4.323
8.438
-1.876
-0.242
0.926
-3.201
-0.902
0.499
-2.796
-2.143
-5.129
-3.112
-3.494
5.067
2.063
-3.148
-3.220
0.514
4.658
4.232
ns
2.691
-0.150
2.847
0.747
-5.059
-4.711
3.811
-1.459
-0.252
-3.164
5.096
-4.513
-0.695
-2.081
-1.324
-2.511
-1.012
-0.488
-0.779
-3.070
7.836
1.220
0.322
-0.242
-2.435
0.088
-2.136
-3.464
-2.575
5.346
2.574
-0.622
-1.106
-2.063
3.166
1.259
-2.549
-0.803
-1.601
0.919
1.423
-1.011
-1.178
P
5.70E-04
2.43E-04
8.27E-01
4.04E-02
1.01E-08
2.05E-05
6.41E-08
1.89E-01
4.16E-02
1.26E-04
1.17E-17
4.48E-07
1.01E-03
3.14E-03
2.57E-02
2.95E-07
2.34E-10
1.26E-04
3.27E-27
8.57E-03
3.37E-05
4.33E-05
1.57E-03
1.53E-03
1.73E-10
1.64E-01
2.58E-12
4.92E-02
6.20E-01
2.32E-04
1.70E-02
2.68E-02
9.16E-04
1.72E-04
ns
1.67E-04
8.14E-03
3.41E-01
1.25E-01
6.28E-05
5.00E-01
8.82E-03
5.08E-02
1.79E-04
6.40E-04
1.43E-04
3.12E-01
1.81E-02
6.15E-08
3.87E-11
6.16E-05
1.33E-03
9.19E-03
4.33E-01
1.30E-03
1.22E-09
1.66E-03
3.96E-03
1.29E-05
3.85E-01
6.67E-01
4.00E-05
3.26E-02
8.60E-02
7.33E-01
4.16E-01
2.89E-01
1.32E-03
1.51E-02
6.86E-01
4.48E-02
8.50E-01
6.69E-07
2.08E-04
4.62E-06
9.47E-02
1.52E-14
6.05E-03
2.82E-01
4.39E-05
6.74E-01
3.46E-16
4.29E-02
1.54E-05
3.22E-17
6.06E-02
8.09E-01
3.55E-01
1.37E-03
3.67E-01
6.18E-01
5.17E-03
3.21E-02
2.92E-07
1.86E-03
4.75E-04
4.05E-07
3.91E-02
1.65E-03
1.28E-03
6.07E-01
3.20E-06
2.31E-05
ns
7.13E-03
8.81E-01
4.42E-03
4.55E-01
4.21E-07
2.46E-06
1.38E-04
1.45E-01
8.01E-01
1.56E-03
3.47E-07
6.38E-06
4.87E-01
3.74E-02
1.86E-01
1.20E-02
3.11E-01
6.26E-01
4.36E-01
2.14E-03
4.65E-15
2.23E-01
7.47E-01
8.09E-01
1.49E-02
9.30E-01
3.27E-02
5.32E-04
1.00E-02
8.98E-08
1.01E-02
5.34E-01
2.69E-01
3.91E-02
1.54E-03
2.08E-01
1.08E-02
4.22E-01
1.09E-01
3.58E-01
1.55E-01
3.12E-01
2.39E-01
Correlation-with-META: 0.782
REPL-CD8+
Weight
Effect
299
-0.044
?
0
ns
?
0
ns
?
0
ns
299
-0.088
299
-0.063
+
299
0.076
?
0
ns
299
-0.051
299
-0.053
299
-0.028
299
-0.016
299
-0.084
?
0
ns
?
0
ns
+
299
0.038
299
-0.051
299
-0.005
299
-0.049
299
-0.024
+
299
0.052
?
0
ns
299
-0.023
299
-0.020
299
-0.007
299
-0.044
299
-0.058
299
-0.036
299
-0.017
?
0
ns
299
-0.034
299
-0.034
299
-0.028
299
-0.039
?
0
ns
+
299
0.013
299
-0.053
299
-0.036
299
-0.028
+
299
0.025
299
-0.030
299
-0.046
299
-0.017
+
299
0.036
299
-0.035
299
-0.033
299
-0.036
?
0
ns
+
299
0.042
+
299
0.039
+
299
0.064
299
-0.051
+
299
0.041
299
-0.032
299
-0.035
299
-0.039
299
-0.023
+
299
0.017
299
-0.044
299
-0.026
?
0
ns
+
299
0.032
299
-0.054
?
0
ns
?
0
ns
299
-0.018
+
299
0.028
299
-0.014
+
299
0.011
299
-0.035
299
-0.009
299
-0.044
299
-0.005
299
-0.056
299
-0.017
299
-0.013
+
299
0.060
299
-0.045
299
-0.005
?
0
ns
?
0
ns
299
-0.001
+
299
0.010
+
299
0.033
+
299
0.030
299
-0.037
299
-0.029
299
-0.032
299
-0.004
299
-0.003
299
-0.012
299
-0.009
?
0
ns
299
-0.054
299
-0.049
?
0
ns
+
299
0.046
?
0
ns
299
-0.048
299
-0.031
+
299
0.014
+
299
0.014
+
299
0.027
?
0
ns
+
299
0.023
?
0
ns
?
0
ns
299
-0.013
299
-0.027
299
-0.011
+
299
0.014
299
-0.018
299
-0.001
299
-0.022
+
299
0.038
299
-0.034
+
299
0.022
299
-0.019
299
0.000
299
-0.014
299
-0.022
299
-0.002
299
-0.012
299
-0.047
+
299
0.019
+
299
0.027
299
-0.005
299
-0.008
299
-0.002
299
-0.024
299
-0.012
299
-0.028
+
299
0.000
+
299
0.026
+
299
0.042
299
-0.003
299
-0.020
299
-0.035
+
299
0.028
299
-0.004
299
-0.018
299
-0.033
299
-0.028
?
0
ns
299
-0.015
299
-0.007
299
-0.027
SE
0.005
ns
ns
ns
0.010
0.007
0.015
ns
0.008
0.008
0.005
0.003
0.012
ns
ns
0.007
0.008
0.002
0.006
0.005
0.019
ns
0.005
0.005
0.003
0.007
0.007
0.007
0.004
ns
0.007
0.008
0.005
0.006
ns
0.005
0.008
0.010
0.006
0.007
0.009
0.007
0.007
0.011
0.006
0.007
0.009
ns
0.012
0.009
0.016
0.007
0.009
0.005
0.007
0.005
0.004
0.007
0.007
0.012
ns
0.008
0.013
ns
ns
0.003
0.008
0.007
0.005
0.009
0.006
0.009
0.002
0.008
0.003
0.004
0.008
0.007
0.007
ns
ns
0.005
0.003
0.011
0.006
0.009
0.006
0.006
0.003
0.006
0.006
0.002
ns
0.007
0.007
ns
0.009
ns
0.007
0.009
0.006
0.004
0.010
ns
0.005
ns
ns
0.005
0.004
0.002
0.004
0.007
0.003
0.005
0.013
0.009
0.006
0.004
0.002
0.004
0.006
0.003
0.004
0.007
0.004
0.006
0.005
0.003
0.002
0.005
0.003
0.005
0.002
0.007
0.011
0.002
0.004
0.005
0.010
0.004
0.005
0.009
0.006
ns
0.003
0.012
0.005
P
2.44E-16
ns
ns
ns
2.97E-15
2.59E-16
1.39E-06
ns
1.34E-10
1.04E-10
3.04E-09
4.29E-09
6.39E-12
ns
ns
1.93E-08
1.74E-10
5.89E-03
2.29E-14
1.95E-06
5.50E-03
ns
3.20E-05
5.04E-05
2.37E-02
7.74E-10
1.81E-15
4.94E-07
5.22E-05
ns
6.56E-06
2.05E-05
2.85E-08
1.77E-10
ns
6.07E-03
4.62E-10
5.59E-04
9.82E-07
1.57E-04
7.56E-04
5.46E-10
2.30E-02
9.12E-04
3.64E-09
3.33E-06
4.91E-05
ns
5.52E-04
3.44E-05
5.70E-05
4.12E-12
1.13E-05
7.19E-09
1.74E-06
3.18E-13
1.35E-07
1.30E-02
2.70E-10
3.19E-02
ns
3.81E-05
7.41E-05
ns
ns
1.14E-07
1.11E-03
6.54E-02
3.05E-02
1.62E-04
1.32E-01
1.92E-06
1.58E-02
1.64E-10
6.07E-07
2.26E-03
2.87E-12
3.71E-10
4.71E-01
ns
ns
8.65E-01
1.07E-04
2.11E-03
6.87E-07
3.79E-05
6.40E-06
6.06E-07
2.20E-01
5.93E-01
3.90E-02
1.25E-04
ns
4.12E-12
3.35E-12
ns
1.13E-06
ns
1.47E-10
6.38E-04
2.02E-02
6.54E-04
8.80E-03
ns
5.43E-06
ns
ns
1.16E-02
7.31E-12
4.30E-07
7.18E-04
7.72E-03
6.20E-01
4.80E-06
3.89E-03
3.44E-04
1.52E-04
3.16E-05
8.63E-01
6.08E-04
1.99E-04
5.34E-01
1.53E-03
1.16E-09
6.22E-07
7.23E-06
3.70E-01
1.03E-02
3.36E-01
3.49E-06
5.90E-05
1.92E-07
8.05E-01
4.61E-04
2.60E-04
2.70E-01
3.85E-06
1.26E-11
5.13E-03
4.02E-01
1.83E-04
1.59E-04
1.30E-05
ns
1.48E-05
5.48E-01
1.54E-07
Correlation-with-META:
REPL-CD14+/monocytes
+?
----+++
-+
-+++?
++
++
+-+
+?
+?
++
+++
++-+
+-+-++-+-+
-?-?+
-+
-++
+-+
++++
-++
+?
++++
-+
?-+
-+
--?+
--+++-++++
++?
+-++++
+++++
+?
-+?
-+
+?
-+
++
-+
-+++--+-+
+-?
++---+
++
++
?++
++
++
++
+?
++
-+
--+++
+++
-+-?
-+
--+
?+-++?
+-+
--+
-++
+?
+?
+-+
++
++
-+
++
++++
--
Weight
213
567
567
567
567
567
567
567
567
567
567
213
567
567
567
567
213
213
567
567
567
567
567
567
567
567
567
567
567
567
567
567
567
567
354
567
354
567
567
567
567
567
567
567
567
567
567
213
567
567
567
567
354
567
567
567
567
354
567
567
567
567
567
567
567
567
567
567
213
567
567
567
567
567
567
567
567
567
213
567
213
567
213
567
567
567
567
567
567
567
567
567
567
567
567
213
567
567
567
567
567
567
567
354
567
567
567
567
213
567
567
567
567
567
567
567
567
567
567
213
567
567
567
354
567
567
567
213
567
567
567
567
567
567
567
0
213
567
567
567
567
567
567
567
567
567
567
0.426
Zscore
2.801
-3.745
-1.806
-1.727
-2.632
-1.900
2.202
-1.164
-1.596
-0.207
0.462
0.895
1.495
3.427
-1.020
2.896
0.640
0.388
2.727
-0.416
2.451
1.513
-1.945
-0.203
-1.029
-2.211
0.498
-2.784
0.188
1.148
-1.615
-1.045
-1.750
-5.551
-2.108
-2.337
0.071
-1.084
-0.649
0.870
-1.023
0.003
-1.252
1.588
0.837
-1.421
2.447
1.684
1.629
0.596
1.958
0.911
-1.433
1.062
0.060
-2.999
-3.275
0.813
-2.671
-2.514
0.250
0.030
-0.703
-2.093
-0.355
-0.680
0.886
-1.396
3.050
-0.361
-2.375
0.991
-1.426
1.346
0.337
-0.562
-1.559
1.032
3.070
-2.749
2.432
-0.379
1.129
1.517
3.843
1.863
-1.169
-0.208
-0.326
0.855
-0.823
-1.536
-1.185
1.569
-0.184
-0.478
-0.058
-2.228
-1.437
-4.551
2.155
2.040
1.943
-0.948
2.126
1.593
1.552
3.060
1.920
0.317
-1.362
-2.527
-2.156
-1.207
1.808
-2.068
1.440
-2.228
-0.933
-0.507
-1.230
-1.037
-1.192
-0.189
0.222
-0.957
-1.545
1.663
-0.138
0.210
-0.602
-1.282
-0.865
3.098
1.288
ns
0.537
-0.896
0.829
2.649
0.977
0.898
1.321
0.295
-1.109
1.788
-3.540
P
5.09E-03
1.80E-04
7.09E-02
8.42E-02
8.48E-03
5.74E-02
2.77E-02
2.45E-01
1.11E-01
8.36E-01
6.44E-01
3.71E-01
1.35E-01
6.11E-04
3.08E-01
3.78E-03
5.22E-01
6.98E-01
6.39E-03
6.78E-01
1.43E-02
1.30E-01
5.18E-02
8.39E-01
3.04E-01
2.71E-02
6.18E-01
5.37E-03
8.51E-01
2.51E-01
1.06E-01
2.96E-01
8.01E-02
2.84E-08
3.50E-02
1.94E-02
9.43E-01
2.78E-01
5.16E-01
3.84E-01
3.06E-01
9.97E-01
2.11E-01
1.12E-01
4.03E-01
1.55E-01
1.44E-02
9.21E-02
1.03E-01
5.51E-01
5.02E-02
3.62E-01
1.52E-01
2.88E-01
9.52E-01
2.71E-03
1.06E-03
4.16E-01
7.57E-03
1.19E-02
8.03E-01
9.76E-01
4.82E-01
3.64E-02
7.23E-01
4.97E-01
3.75E-01
1.63E-01
2.29E-03
7.18E-01
1.76E-02
3.22E-01
1.54E-01
1.78E-01
7.37E-01
5.74E-01
1.19E-01
3.02E-01
2.14E-03
5.98E-03
1.50E-02
7.05E-01
2.59E-01
1.29E-01
1.21E-04
6.25E-02
2.42E-01
8.35E-01
7.45E-01
3.92E-01
4.11E-01
1.24E-01
2.36E-01
1.17E-01
8.54E-01
6.33E-01
9.54E-01
2.59E-02
1.51E-01
5.33E-06
3.11E-02
4.14E-02
5.20E-02
3.43E-01
3.35E-02
1.11E-01
1.21E-01
2.21E-03
5.48E-02
7.51E-01
1.73E-01
1.15E-02
3.11E-02
2.27E-01
7.06E-02
3.87E-02
1.50E-01
2.59E-02
3.51E-01
6.12E-01
2.19E-01
3.00E-01
2.33E-01
8.50E-01
8.25E-01
3.39E-01
1.22E-01
9.64E-02
8.91E-01
8.34E-01
5.47E-01
2.00E-01
3.87E-01
1.95E-03
1.98E-01
ns
5.91E-01
3.70E-01
4.07E-01
8.08E-03
3.29E-01
3.69E-01
1.87E-01
7.68E-01
2.67E-01
7.38E-02
4.01E-04
Correlation-with-META -0.006
REPL-LCLs
Weight
Effect
869
0.000
869
-0.001
?
0
ns
+
869
0.003
869
-0.004
869
-0.003
?
0
ns
869
-0.005
+
869
0.001
869
-0.003
869
-0.001
+
869
0.011
869
0.000
869
-0.001
869
-0.001
869
-0.001
869
-0.005
+
869
0.002
869
-0.003
869
-0.001
?
0
ns
+
869
0.002
+
869
0.001
+
869
0.003
869
-0.012
0.000
869
869
0.000
+
869
0.003
869
-0.004
+
869
0.000
+
869
0.001
869
0.000
+
869
0.003
+
869
0.006
?
0
ns
+
869
0.000
869
-0.006
869
-0.001
+
869
0.006
869
-0.001
869
-0.001
869
-0.001
869
-0.007
?
0
ns
869
-0.002
869
-0.002
+
869
0.001
+
869
0.001
+
869
0.001
869
0.000
?
0
ns
+
869
0.002
?
0
ns
869
0.000
869
-0.001
869
-0.002
+
869
0.001
?
0
ns
?
0
ns
869
0.000
869
-0.003
869
0.000
+
869
0.000
869
-0.001
+
869
0.001
869
-0.008
?
0
ns
869
-0.004
869
-0.002
?
0
ns
869
-0.009
869
-0.001
+
869
0.005
?
0
ns
?
0
ns
?
0
ns
869
-0.003
+
869
0.001
?
0
ns
+
869
0.006
?
0
ns
+
869
0.000
?
0
ns
+
869
0.010
869
-0.001
869
-0.003
+
869
0.002
+
869
0.005
?
0
ns
+
869
0.002
869
-0.005
+
869
0.002
+
869
0.000
+
869
0.001
+
869
0.002
869
-0.001
869
-0.004
869
-0.001
+
869
0.004
+
869
0.002
+
869
0.003
+
869
0.002
869
0.000
+
869
0.002
869
0.000
869
-0.004
869
-0.001
+
869
0.001
+
869
0.000
869
-0.006
869
-0.001
869
-0.003
869
-0.001
+
869
0.002
?
0
ns
869
-0.001
869
0.000
869
-0.002
869
0.000
869
-0.001
869
-0.003
+
869
0.005
+
869
0.003
?
0
ns
?
0
ns
869
0.000
869
-0.007
869
0.000
+
869
0.000
?
0
ns
+
869
0.000
869
-0.003
869
-0.008
869
-0.004
?
0
ns
?
0
ns
+
869
0.000
+
869
0.001
869
-0.005
869
-0.003
869
-0.003
+
869
0.001
869
-0.001
+
869
0.001
869
-0.001
869
-0.002
+
869
0.001
SE
0.001
0.001
ns
0.003
0.003
0.002
ns
0.001
0.002
0.002
0.001
0.003
0.000
0.001
0.001
0.001
0.001
0.001
0.002
0.003
ns
0.003
0.001
0.001
0.003
0.002
0.002
0.001
0.001
0.001
0.001
0.001
0.001
0.002
ns
0.001
0.003
0.001
0.001
0.001
0.001
0.001
0.002
ns
0.001
0.001
0.002
0.001
0.001
0.000
ns
0.001
ns
0.001
0.002
0.002
0.001
ns
ns
0.001
0.001
0.001
0.001
0.001
0.002
0.002
ns
0.003
0.001
ns
0.002
0.001
0.003
ns
ns
ns
0.002
0.001
ns
0.002
ns
0.001
ns
0.005
0.002
0.001
0.002
0.001
ns
0.001
0.003
0.001
0.001
0.001
0.001
0.002
0.001
0.002
0.001
0.001
0.002
0.003
0.001
0.001
0.000
0.002
0.002
0.001
0.000
0.002
0.002
0.002
0.001
0.001
ns
0.001
0.001
0.001
0.001
0.003
0.002
0.002
0.001
ns
ns
0.001
0.002
0.001
0.001
ns
0.001
0.001
0.004
0.001
ns
ns
0.001
0.001
0.001
0.001
0.001
0.001
0.001
0.001
0.001
0.001
0.001
P
9.87E-01
1.52E-01
ns
3.10E-01
1.43E-01
6.60E-02
ns
4.87E-04
7.61E-01
5.62E-02
5.78E-01
5.13E-05
8.47E-01
2.68E-01
5.33E-02
3.55E-01
8.23E-07
8.03E-02
1.63E-01
7.76E-01
ns
4.32E-01
2.50E-01
1.43E-02
2.19E-04
8.93E-01
9.14E-01
6.73E-03
4.84E-03
8.67E-01
6.25E-01
8.09E-01
3.58E-04
6.52E-03
ns
7.58E-01
4.99E-02
3.00E-01
7.59E-07
4.36E-01
5.02E-01
6.33E-01
1.69E-05
ns
1.80E-01
3.49E-02
4.57E-01
3.74E-01
2.59E-01
4.14E-01
ns
1.63E-02
ns
7.92E-01
5.19E-01
4.37E-01
3.14E-01
ns
ns
8.72E-01
3.07E-05
9.59E-01
9.29E-01
4.80E-01
5.95E-01
6.14E-04
ns
1.85E-01
1.17E-01
ns
6.71E-06
2.25E-01
9.47E-02
ns
ns
ns
1.21E-01
4.67E-01
ns
9.89E-03
ns
9.54E-01
ns
4.51E-02
4.13E-01
4.80E-02
2.93E-01
1.62E-03
ns
2.92E-01
8.21E-02
2.56E-03
7.90E-01
3.95E-01
2.39E-01
6.46E-01
1.39E-03
7.02E-01
7.93E-03
2.03E-02
8.55E-02
5.09E-01
5.48E-01
6.33E-02
5.52E-01
5.04E-02
5.15E-01
1.87E-02
5.20E-01
7.85E-03
5.10E-01
8.85E-02
2.01E-01
1.79E-02
ns
2.32E-01
9.91E-01
1.96E-01
9.09E-01
6.37E-01
1.46E-01
1.26E-03
3.75E-04
ns
ns
9.27E-01
1.97E-03
5.40E-01
7.14E-01
ns
7.79E-01
6.02E-03
3.34E-02
4.77E-03
ns
ns
8.17E-01
3.58E-01
7.62E-04
1.66E-02
1.28E-02
3.20E-01
2.03E-01
3.50E-01
2.47E-01
4.66E-02
1.73E-01
Correlation-with-META:
REPL-LYMPHOCYTES
Weight
?
0
?
0
1244
1244
1244
?
0
?
0
?
0
?
0
?
0
?
0
1244
?
0
?
0
1244
+
1244
?
0
1244
1244
1244
+
1244
?
0
?
0
1244
?
0
1244
1244
?
0
?
0
?
0
1244
1244
?
0
1244
1244
?
0
?
0
?
0
?
0
?
0
?
0
?
0
?
0
?
0
1244
?
0
1244
1244
?
0
?
0
+
1244
?
0
+
1244
?
0
?
0
?
0
1244
?
0
1244
?
0
1244
?
0
?
0
1244
1244
?
0
?
0
1244
?
0
?
0
1244
?
0
1244
?
0
?
0
1244
?
0
1244
?
0
?
0
?
0
?
0
?
0
+
1244
+
1244
?
0
1244
1244
?
0
?
0
?
0
1244
?
0
?
0
?
0
1244
?
0
?
0
?
0
1244
?
0
?
0
?
0
1244
?
0
?
0
?
0
?
0
?
0
?
0
+
1244
1244
?
0
?
0
+
1244
?
0
?
0
1244
?
0
?
0
?
0
?
0
1244
1244
?
0
?
0
1244
?
0
?
0
?
0
1244
?
0
?
0
?
0
?
0
?
0
?
0
1244
+
1244
+
1244
1244
?
0
?
0
1244
?
0
?
0
1244
0.784
Effect
ns
ns
-0.009
-0.012
-0.013
ns
ns
ns
ns
ns
ns
0.000
ns
ns
-0.003
0.007
ns
-0.001
-0.004
-0.004
0.010
ns
ns
-0.005
ns
-0.006
-0.005
ns
ns
ns
-0.001
-0.007
ns
-0.003
-0.006
ns
ns
ns
ns
ns
ns
ns
ns
ns
-0.004
ns
-0.005
-0.003
ns
ns
0.006
ns
0.005
ns
ns
ns
-0.003
ns
-0.010
ns
-0.005
ns
ns
-0.002
-0.002
ns
ns
-0.012
ns
ns
-0.003
ns
-0.001
ns
ns
-0.002
ns
-0.003
ns
ns
ns
ns
ns
0.005
0.003
ns
-0.001
-0.006
ns
ns
ns
-0.002
ns
ns
ns
-0.002
ns
ns
ns
-0.005
ns
ns
ns
-0.002
ns
ns
ns
ns
ns
ns
0.002
-0.003
ns
ns
0.006
ns
ns
-0.001
ns
ns
ns
ns
-0.003
-0.004
ns
ns
-0.002
ns
ns
ns
-0.003
ns
ns
ns
ns
ns
ns
-0.004
0.002
0.004
-0.003
ns
ns
-0.003
ns
ns
-0.002
SE
ns
ns
0.001
0.001
0.001
ns
ns
ns
ns
ns
ns
0.000
ns
ns
0.000
0.000
ns
0.000
0.000
0.000
0.001
ns
ns
0.001
ns
0.001
0.000
ns
ns
ns
0.000
0.001
ns
0.000
0.000
ns
ns
ns
ns
ns
ns
ns
ns
ns
0.000
ns
0.001
0.000
ns
ns
0.001
ns
0.001
ns
ns
ns
0.001
ns
0.001
ns
0.000
ns
ns
0.000
0.001
ns
ns
0.002
ns
ns
0.000
ns
0.000
ns
ns
0.000
ns
0.000
ns
ns
ns
ns
ns
0.001
0.000
ns
0.000
0.001
ns
ns
ns
0.000
ns
ns
ns
0.000
ns
ns
ns
0.001
ns
ns
ns
0.000
ns
ns
ns
ns
ns
ns
0.000
0.001
ns
ns
0.001
ns
ns
0.000
ns
ns
ns
ns
0.000
0.000
ns
ns
0.000
ns
ns
ns
0.000
ns
ns
ns
ns
ns
ns
0.000
0.001
0.001
0.000
ns
ns
0.001
ns
ns
0.001
P
ns
ns
1.58E-24
5.84E-32
1.47E-40
ns
ns
ns
ns
ns
ns
2.96E-01
ns
ns
4.89E-17
3.02E-69
ns
3.86E-15
4.25E-40
1.92E-22
2.53E-17
ns
ns
9.87E-22
ns
2.42E-13
8.10E-32
ns
ns
ns
9.83E-08
1.68E-27
ns
2.12E-16
1.17E-31
ns
ns
ns
ns
ns
ns
ns
ns
ns
7.06E-20
ns
1.13E-19
1.64E-22
ns
ns
8.46E-11
ns
5.82E-16
ns
ns
ns
2.57E-06
ns
3.00E-35
ns
4.41E-33
ns
ns
3.67E-04
3.04E-05
ns
ns
5.39E-14
ns
ns
3.44E-11
ns
3.08E-04
ns
ns
1.32E-10
ns
1.52E-15
ns
ns
ns
ns
ns
9.72E-08
5.87E-31
ns
2.19E-03
1.29E-16
ns
ns
ns
5.27E-18
ns
ns
ns
3.80E-12
ns
ns
ns
1.95E-12
ns
ns
ns
5.62E-07
ns
ns
ns
ns
ns
ns
4.24E-13
1.07E-07
ns
ns
5.35E-08
ns
ns
8.02E-06
ns
ns
ns
ns
2.35E-11
2.82E-17
ns
ns
7.43E-05
ns
ns
ns
4.61E-11
ns
ns
ns
ns
ns
ns
8.06E-29
8.18E-03
4.60E-17
1.30E-45
ns
ns
3.66E-07
ns
ns
1.44E-03
Correlation-with-META:
REPL-PBMCs
Weight
-?
134
-362
-362
-362
-362
-362
++
362
-362
-362
-362
-?
134
-?
134
-362
++
362
-362
++
362
-?
134
-362
-362
-362
++
362
++
362
-362
-362
-362
-362
-?
134
-+
362
-362
+?
134
-362
-362
-362
-362
-?
134
++
362
-362
-362
-362
++
362
-+
362
-362
-362
++
362
-362
-362
134
-?
-?
134
++
362
++
362
++
362
-362
+?
134
-362
-362
-362
-+
362
+?
134
-362
-+
362
-+
362
++
362
++
362
-362
+362
-362
++
362
-362
++
362
-+
362
-362
-362
-?
134
-+
362
-362
-?
134
++
362
-362
-362
-362
+?
134
+?
134
++
362
-+
362
+?
134
-362
-+
362
-362
-362
-?
134
++
362
-362
-362
-+
362
-362
-362
-+
362
+362
-362
-+
362
+362
++
362
++
362
-362
++
362
-?
134
++
362
-+
362
-?
134
-?
134
-+
362
-362
-362
-+
362
++
362
-362
+?
134
-+
362
-362
-362
-+
362
-?
134
++
362
-?
134
+?
134
++
362
-+
362
-?
134
-?
134
-362
-362
-362
-362
++
362
++
362
-?
134
-?
134
-+
362
++
362
0+
362
-?
134
-362
-362
-362
-?
134
-362
-+
362
0.595
Zscore
-5.295
-5.080
-3.175
-3.216
-2.964
-3.205
1.598
-2.543
-1.393
-3.238
-1.369
-3.494
-3.102
1.701
-2.616
3.070
-3.295
-2.648
-2.667
-2.822
2.014
3.276
-3.707
-5.918
-3.800
-2.214
-2.059
-1.503
-1.365
0.155
-2.776
-2.515
-2.697
-2.554
-3.076
0.023
-2.455
-2.038
-2.466
3.000
-0.290
-2.347
-1.310
3.085
-1.052
-3.148
-2.644
-1.567
1.882
2.957
2.434
-3.938
0.011
-1.094
-2.220
-3.672
-0.991
0.004
-3.372
-0.982
-1.514
1.262
1.518
-1.895
-1.145
-1.297
0.046
-5.088
2.523
-0.863
-2.933
-3.628
-1.893
-0.085
-1.612
-3.470
1.289
-2.944
-2.093
-2.411
0.038
0.548
2.176
0.866
0.014
-1.674
-0.458
-2.818
-2.834
-1.906
0.782
-2.380
-2.530
-1.394
-2.103
-1.969
0.212
0.098
-1.268
-0.231
-0.385
2.095
1.551
-2.365
2.930
-1.227
0.892
0.177
-2.974
-1.443
0.280
-2.254
-1.526
-0.804
1.849
-1.746
0.316
0.160
-1.197
-2.807
-0.679
-3.171
0.618
-1.937
0.097
0.739
0.661
-1.262
-3.169
-1.755
-3.909
-3.090
-3.179
1.957
1.474
-0.872
-1.708
-0.176
1.048
0.665
-2.722
-3.917
-4.049
-3.333
-1.635
-2.658
-0.860
P
1.19E-07
3.77E-07
1.50E-03
1.30E-03
3.04E-03
1.35E-03
1.10E-01
1.10E-02
1.64E-01
1.21E-03
1.71E-01
4.75E-04
1.92E-03
8.89E-02
8.90E-03
2.14E-03
9.83E-04
8.10E-03
7.64E-03
4.77E-03
4.40E-02
1.05E-03
2.10E-04
3.27E-09
1.45E-04
2.69E-02
3.95E-02
1.33E-01
1.72E-01
8.77E-01
5.51E-03
1.19E-02
6.99E-03
1.07E-02
2.10E-03
9.82E-01
1.41E-02
4.15E-02
1.37E-02
2.70E-03
7.72E-01
1.90E-02
1.90E-01
2.04E-03
2.93E-01
1.65E-03
8.20E-03
1.17E-01
5.99E-02
3.10E-03
1.49E-02
8.22E-05
9.91E-01
2.74E-01
2.64E-02
2.40E-04
3.22E-01
9.97E-01
7.45E-04
3.26E-01
1.30E-01
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ns
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ns
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ns
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++--?
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?++
?+
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++
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--?-+-?
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567
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213
567
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567
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8.36E-05
2.59E-02
6.83E-02
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?
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?
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?
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ns
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ns
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4.85E-03
2.80E-04
1.21E-02
6.75E-05
1.70E-01
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?
?
+
?
?
?
?
?
?
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?
?
?
?
?
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?
?
?
?
?
?
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?
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?
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?
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?
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?
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?
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?
?
?
?
?
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?
?
?
?
?
?
?
?
?
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ns
0.001
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0.001
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0.000
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ns
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ns
0.000
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ns
0.001
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0.000
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0.000
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0.001
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ns
0.000
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ns
0.001
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0.001
ns
0.001
0.000
0.001
0.001
ns
ns
ns
ns
ns
ns
ns
ns
ns
0.000
ns
0.000
ns
ns
ns
ns
0.000
0.001
ns
ns
ns
0.000
0.001
0.000
ns
0.001
0.000
0.000
ns
0.001
ns
ns
ns
ns
ns
ns
ns
ns
ns
0.001
ns
ns
ns
ns
ns
ns
0.000
ns
0.000
0.000
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ns
ns
0.000
ns
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ns
0.000
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0.000
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0.000
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0.000
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0.000
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ns
0.000
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0.000
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0.000
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0.000
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3.26E-03
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ns
8.07E-01
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7.59E-02
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3.94E-36
ns
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1.02E-08
ns
1.88E-01
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9.47E-12
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6.80E-08
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3.10E-05
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1.38E-20
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4.11E-10
ns
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2.01E-07
ns
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1.97E-07
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2.71E-21
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4.92E-08
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1.55E-04
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ns
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2.78E-14
5.94E-17
2.68E-09
ns
3.45E-08
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3.84E-13
ns
4.05E-01
ns
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ns
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1.62E-26
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ns
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7.80E-13
ns
2.01E-03
2.67E-09
ns
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6.65E-16
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7.42E-13
5.13E-04
ns
1.47E-08
ns
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1.42E-13
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1.03E-15
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1.84E-10
ns
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ns
7.00E-06
ns
ns
1.39E-01
6.44E-06
ns
ns
2.26E-07
1.53E-04
1.15E-13
ns
1.41E-09
2.89E-06
ns
--++
-++?
-+
-+
+---+
++
--+
++
-+
-++
---+
-+
-+
++
++
++
++
-?
--+
-++
++
-++
-+
-++
----+
+?
+-?
++
-?
++
??
-++?
+-+
++
++
-+
++
-----+
++
+?
-?
--+
-+
-?
++
++
-?
++
---+
-+
-?
--+
-?
--?
-?
++
-?
-?
+?
++
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+-?
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++
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-?
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--+
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---?
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--+-++
---+
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-+
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++
++
--?
++
-+-++
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362
362
362
362
362
134
362
362
362
362
362
362
362
362
362
362
362
362
362
362
362
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134
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362
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134
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930
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4839
1117
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1939
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7453
55356
92935
4830
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7923
ARHGAP32
ZNF365
EEF2
MT1A
PDZD4
DPH5
OBSCN
DOCK10
NAT10
CKAP4
ZNF544
TC2N
BTLA
TLE2
CCT2
C10orf2
EVL
FASLG
GNL3
RPS6
BATF
IRF8
CD79B
SRPRB
GPA33
NOL11
TESPA1
GPR137B
IRAK3
PUS1
SET
ASCL2
MKI67IP
LPCAT1
CYP4F22
MAFB
ITK
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FAM214B
PDE3B
LINC00152
GRPEL2
C9orf123
CMKLR1
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ANXA2
SEH1L
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ABCE1
MORC2
TRAF3IP2
ZNF671
DBP
TMX4
ALKBH2
ATP6V0E2
MAPKAPK5-AS1
MT1E
RPS4X
PLBD1
PPAT
KIF1B
KIAA0125
GPR114
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LY9
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UXT
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CCT8
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CAPN2
STAT1
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TMEM97
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LRRFIP2
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ROPN1L
PACSIN1
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DPP4
GFI1
PLEK
CCL5
MTUS1
VAMP3
GLIPR2
DYRK2
FBXO6
RPS23
IDS
GPATCH4
MEGF9
TSPAN2
PNPO
DPH2
YPEL1
URI1
MBOAT1
LRPPRC
RCAN2
TRMT13
PPRC1
PDCD2L
BCKDHB
AFF3
PARP1
RPL8
FRMD3
CD19
EBF1
NOP2
CHI3L2
B4GALT5
EIF2D
SLC26A8
WARS
SLC22A15
MARS2
NME1
CBLL1
CPA5
HSD17B8
-----++-+++
-----++++++
++-+++
--------------------++++++
-----------------------+-----------++-+++
----------++-+++
------------------------------++-+++
++++++
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--+--++--++
++++++
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-------+---------------------------++++++
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++++++
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++++++
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---------------------------------?-++++++
----------------+-?-++++++
-----++++++
++++++
++++++
--------------------------
7257
7257
7257
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?
?
?
+
?
?
?
+
?
+
?
?
?
?
+
?
?
+
?
+
?
?
?
+
?
?
+
?
?
?
+
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?
+
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?
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?
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?
?
+
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?
?
?
?
?
?
?
?
?
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?
?
?
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?
?
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?
?
?
?
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?
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?
?
?
?
+
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?
?
+
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?
?
?
?
?
?
?
?
?
?
?
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?
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?
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?
+
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?
?
+
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?
+
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?
?
?
?
394
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3.59E-01
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4.55E-01
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1.76E-02
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1.55E-02
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5.38E-01
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1.50E-02
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4.08E-01
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3.22E-01
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3.67E-01
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4.11E-04
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ns
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?
?
?
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?
?
?
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?
?
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?
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1.32E-04
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2.39E-02
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4.42E-01
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9.03E-03
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3.25E-02
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6.72E-01
?
++
-++
+?
??-??+
----+++?+
++++
-++
?-+?++
?+
++
-++
-++
?+
++
+-++
++?
--?+
-++
??++-+
--++
--?++
+?
-?
-?+
?+
++
++
?+
-?-?-++
+---?
+?+
--?
-+
++
-+
++
++
?+
++++
-??++
+++
++
?+
++
---++
++--+
+++
-+
++
++
?
+++
-+
?+
-?
++
?+
?+
++?+
+++
+?+
?++
---+?--+
?--++
--+
??+
?+
--+
-?-
0
515
515
515
302
213
213
515
213
213
515
515
515
515
515
515
515
213
515
515
515
515
515
213
515
515
213
515
213
515
515
515
515
515
213
515
515
515
515
515
302
515
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213
515
515
213
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515
515
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515
515
515
515
213
515
302
302
515
213
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515
515
213
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515
515
302
515
213
515
302
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213
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515
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515
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213
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213
515
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213
ns
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ns
0.741
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ns
1.139
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ns
1.62E-08
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5.33E-01
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++
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362
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MPO
PSIP1
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PIK3C2B
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567
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?
?
?
?
?
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?
+
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?
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?
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?
+
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?
?
?
?
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++
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---+
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++
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--?
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++
++
++
--++
++
++-+
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8731
9452
90673
64061
10276
492311
58191
56342
79156
9804
5955
140739
6224
5411
387882
115
4927
285172
3978
8876
1368
54507
137872
115825
91689
3267
57570
65983
51747
9314
6636
84695
25849
55833
84898
1669
1545
5092
5226
54663
3189
84513
4790
54432
221078
10871
57552
10663
6279
56911
79664
5037
115123
55922
755
6767
84719
4673
81793
10949
8707
84881
27440
64794
51765
705
117289
26520
55170
2043
4215
2012
57665
29883
706
6208
6988
9638
284029
64852
54838
9451
2531
118980
10056
55568
23556
517
4094
308
388566
8115
7019
10451
116225
3904
7433
9580
285195
112840
25983
56474
171568
58486
7322
57171
55720
10228
56922
23231
131616
26253
30815
83666
7076
257240
158248
6452
1192
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642
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51650
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79932
27065
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5294
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7057
55178
2530
1608
80018
6583
163486
607
334
55640
81552
51495
8291
8192
83937
RNMT
ITM2A
PPP1R3E
TSPYL2
NET1
IGIP
CXCL16
PPAN
PLEKHF1
TOMM20
RCN2
UBE2F
RPS20
PNN
C12orf75
ADCY9
NUP88
FAM126B
LIG1
VNN1
CPM
ADAMTSL4
ADHFE1
WDFY2
C22orf32
AGFG1
TRMT5
GRAMD3
LUC7L3
KLF4
SNRPF
LOXL3
PARM1
UBAP2
PLXDC2
DEFA4
CYP1B1
PCBD1
PGD
WDR74
HNRNPH3
PPAPDC1B
NFKB1
YIPF1
NSUN6
CD300C
NCEH1
CXCR6
S100A8
C21orf7
NARG2
PEBP1
MARCH3
NKRF
C21orf2
ST13
LINC00260
NAP1L1
TLR10
HNRNPA0
B3GALT2
RPUSD4
CECR5
DDX31
MST4
BYSL
TAGAP
TIMM9
PRMT6
EPHA4
MAP3K3
EMP1
RDH14
CNOT7
TSPO
RPS14
TCTA
FEZ1
LINC00324
TUT1
WBP1L
EIF2AK3
KDSR
SFXN2
FARSB
GALNT10
PIGN
ATP5G2
MAF
ANXA5
ZNF470
TCL1A
TFAM
VAV3
ZMYND19
LAIR2
VIPR1
SOX13
SLC9A9
WDR89
NGDN
CTPS2
POLR3H
ZBED5
UBE2D2
DOLPP1
TSR1
STX6
MCCC1
SEL1L3
TMEM42
CLEC4E
ST6GALNAC6
PARP9
TIMP1
KLHL34
TTC16
SH3BP2
CLIC1
VRK1
S100A12
GNG2
FAM53B
QPCT
DAP3
BLMH
HIST1H3H
MRPS33
SH3BGRL3
KIAA0319L
NSG1
BNC2
NLRP12
PIK3CG
C3orf62
THBS1
RNMTL1
FUT8
DGKG
NAA25
SLC22A4
DENND1B BCL9
APLP2
FLVCR2
VOPP1
PTPLAD1
DYSF
CLPP
RASSF4
---------------+
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-------+----------?-+++-++
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?
?
?
?
?
?
?
?
+
?
?
?
?
?
?
?
+
?
?
?
?
+
?
?
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?
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?
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?
?
?
?
?
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?
?
?
?
?
?
?
?
?
?
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?
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?
?
?
?
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?
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?
?
?
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?
?
?
?
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?
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?
?
?
?
?
?
?
?
?
?
?
+
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?
?
?
+
?
?
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?
?
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?
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??
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515
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213
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?
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?
?
?
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?
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?
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?
?
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?
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ns
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567
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ns
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0
869
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?
?
?
?
?
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?
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?
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?
?
?
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?
?
?
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?
?
?
?
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?
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?
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++
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++
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++
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++
++
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++
-?
++
+-+
-?
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++++
++
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++
-+
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+-?
-+
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-?
-+
++
++
-+
-+
--?
-?
+?
-?
-+
---+
-+
++
+?
++
--+
+?
--++
--?
-?
-+?
++
++-?
-+
-++
+++
++
-+
-+?
-?
-+
-+
++
++
++
++
-+
+++
-+
+-+
++++
+--?
++
++-+
++
-+
+++--?
+++
362
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?
?
?
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?
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?
?
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?
?
?
?
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?
?
?
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?
?
?
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?
?
?
?
?
?
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?
?
?
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?
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?
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?
?
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?
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?
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?
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?
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?
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394
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ns
?
?
?
+
?
?
?
?
?
+
?
?
+
?
?
+
?
?
?
?
+
?
+
?
+
?
?
?
+
?
?
+
?
?
?
?
?
+
?
+
+
?
?
?
?
?
?
?
?
+
?
?
?
+
?
?
?
?
?
?
?
+
?
?
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?
?
?
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?
?
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?
?
?
?
?
?
?
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?
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?
?
?
+
?
+
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?
?
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?
?
+
?
?
?
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?
?
?
?
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?
?
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?
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0.003
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ns
ns
ns
0.003
0.003
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0.004
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ns
0.003
ns
0.003
ns
ns
0.003
0.003
0.003
0.003
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0.003
ns
ns
0.003
ns
ns
ns
0.003
ns
0.003
0.003
ns
ns
ns
0.002
0.003
ns
0.003
ns
ns
ns
0.004
0.003
ns
0.003
0.003
0.003
ns
0.002
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ns
ns
0.003
ns
0.003
0.003
ns
0.003
0.002
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ns
0.003
ns
ns
ns
0.003
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ns
0.003
ns
ns
0.003
6.93E-09
ns
7.99E-02
1.36E-01
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ns
ns
9.54E-02
ns
2.45E-06
3.03E-01
6.12E-08
6.16E-02
8.34E-01
ns
ns
4.64E-03
1.00E-02
ns
ns
5.19E-06
2.15E-01
ns
ns
ns
ns
7.34E-01
ns
8.56E-11
1.59E-02
2.80E-09
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ns
2.19E-01
ns
3.03E-07
3.19E-01
6.03E-01
4.15E-02
ns
ns
ns
6.07E-06
ns
1.83E-01
1.21E-03
ns
4.02E-01
3.25E-03
ns
ns
4.17E-02
6.05E-11
ns
ns
1.75E-02
6.24E-01
ns
ns
3.79E-01
3.98E-01
6.97E-01
ns
ns
4.61E-02
ns
ns
8.91E-02
5.85E-01
9.65E-07
7.44E-01
ns
3.06E-01
6.36E-03
5.77E-01
ns
ns
ns
1.17E-04
3.07E-02
ns
1.07E-03
6.23E-02
1.08E-02
2.79E-03
1.97E-01
7.30E-03
ns
6.09E-01
ns
2.46E-03
ns
ns
1.07E-03
5.65E-02
2.44E-06
9.39E-01
6.19E-01
4.16E-02
ns
ns
4.12E-01
ns
ns
ns
1.89E-01
ns
4.64E-01
7.99E-06
ns
ns
ns
3.61E-01
7.06E-01
ns
1.52E-05
ns
ns
ns
4.86E-02
4.79E-01
ns
7.73E-01
7.58E-01
4.61E-01
ns
3.46E-07
1.51E-01
ns
ns
3.21E-04
ns
1.94E-01
1.64E-03
ns
5.40E-01
3.86E-05
1.65E-02
ns
3.22E-03
ns
ns
ns
5.56E-03
7.33E-01
ns
4.99E-02
ns
ns
2.67E-02
++++
-++++-?
---+
?+
-+?
--++
+?++??+
?+
?-?++
-+--+
-?
++
-??+
++
?+
?+
++
?+
-+?+
++
+-?
+-+
-?++?+?
??-++
+??++
+?
++
-?+
-+
++
+??+
+?
-+
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-+
+?----++
?-+-?
--?++
++-+
-+
--?
-?
-+
+++
+-+
++++
+?
?-+
+?+
-?
?+
++
+-?+++++-?---++
+-+
-+
++
?+--++
-+
-?--+
?+
--
515
515
515
515
515
515
515
515
302
515
515
515
213
515
302
515
515
515
515
213
515
515
213
213
213
213
515
213
515
515
515
515
515
515
0
515
515
213
213
515
213
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213
515
515
213
515
515
515
0
515
515
515
213
515
515
213
302
213
213
515
515
515
213
213
515
302
515
515
213
515
515
515
213
213
302
515
515
515
302
515
515
213
515
515
515
515
515
213
515
515
302
515
515
213
515
515
515
515
515
515
302
302
515
515
515
515
515
515
515
515
302
213
515
515
213
302
213
515
515
515
213
515
515
515
515
515
515
213
515
515
515
515
515
515
515
515
213
515
515
515
515
515
515
213
515
515
213
515
1.495
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ns
2.879
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0.470
2.311
1.585
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2.301
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ns
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9.25E-01
9.93E-02
5.71E-04
6.62E-01
2.85E-02
9.82E-01
1.71E-05
ns
3.99E-03
1.79E-01
6.00E-01
6.38E-01
2.08E-02
1.13E-01
5.95E-01
2.41E-03
2.14E-02
3.81E-01
1.88E-02
2.97E-02
2.27E-01
8.73E-01
2.60E-01
ns
4.88E-01
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8.47E-01
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8.85E-01
7.08E-02
8.81E-01
4.36E-01
9.94E-02
7.64E-01
4.32E-01
9.97E-01
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2.84E-02
5.68E-01
4.25E-02
5.73E-01
8.52E-01
1.51E-01
6.80E-02
2.89E-02
5.01E-01
5.25E-01
4.63E-01
4.79E-01
7.66E-01
5.34E-01
5.82E-02
7.35E-01
1.18E-01
3.04E-01
1.62E-01
6.27E-01
6.83E-01
1.32E-02
2.44E-02
3.83E-01
8.13E-01
3.86E-01
4.35E-02
7.27E-02
7.90E-01
5.46E-01
2.42E-02
6.99E-04
7.08E-01
2.40E-01
3.17E-02
1.44E-01
4.11E-01
3.47E-02
5.59E-01
+
+
+
+
+
+
?
+
?
?
?
?
?
+
?
+
+
?
+
+
?
?
+
?
?
+
?
+
?
+
?
+
?
?
+
?
?
+
+
?
?
+
+
+
?
+
+
?
?
+
+
+
?
+
?
+
+
+
?
+
+
+
+
+
+
+
+
+
+
+
?
+
?
?
+
+
?
+
?
+
+
+
+
+
?
+
+
+
?
+
+
?
-
299
299
299
299
299
299
299
299
299
299
299
299
299
299
299
299
299
299
299
0
299
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0
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0.015
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0.001
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0.023
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0.001
0.014
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0.021
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0.009
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0.002
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0.003
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0.004
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0.014
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0.004
0.003
0.002
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0.003
0.008
ns
0.006
5.88E-01
5.61E-01
2.89E-02
1.79E-01
2.02E-01
1.71E-01
4.12E-02
9.07E-03
1.03E-07
4.67E-03
6.49E-08
2.67E-01
2.15E-03
4.44E-01
2.03E-01
2.16E-01
8.41E-02
2.58E-01
2.31E-01
ns
2.72E-02
1.80E-04
ns
ns
ns
ns
2.47E-06
ns
5.00E-01
ns
8.91E-01
3.79E-01
7.40E-04
1.04E-13
ns
1.66E-05
1.11E-01
ns
ns
4.75E-02
ns
ns
1.21E-03
ns
1.44E-01
3.57E-03
ns
3.58E-02
3.28E-02
2.26E-02
ns
3.88E-02
5.32E-01
9.56E-01
ns
4.09E-01
2.37E-01
ns
7.41E-05
ns
ns
2.39E-03
1.78E-03
1.07E-01
ns
ns
3.67E-03
8.42E-01
1.48E-02
1.69E-04
ns
1.19E-02
6.93E-06
1.42E-01
ns
ns
1.72E-01
5.66E-01
2.47E-01
5.31E-01
5.49E-01
1.62E-02
3.60E-02
ns
2.02E-01
5.93E-01
9.00E-03
5.46E-03
6.70E-02
ns
1.52E-01
2.03E-02
9.91E-01
2.66E-02
5.91E-02
ns
1.74E-04
2.89E-01
6.17E-01
9.61E-01
6.20E-02
1.58E-03
9.26E-01
3.20E-01
3.67E-01
1.89E-01
9.98E-02
5.13E-01
3.93E-01
3.89E-03
4.24E-03
9.02E-04
1.13E-01
ns
4.36E-02
1.73E-01
ns
9.39E-02
ns
2.54E-02
3.70E-02
8.99E-03
ns
2.47E-02
1.60E-03
4.12E-02
5.40E-02
1.10E-01
1.04E-01
ns
6.48E-03
1.05E-01
2.14E-01
3.64E-02
2.75E-01
2.00E-02
2.52E-02
8.00E-02
ns
5.81E-01
7.55E-01
4.11E-02
3.51E-01
5.70E-01
9.56E-03
ns
6.17E-01
1.77E-02
ns
2.26E-04
+++---+
++
-?--+
-+
++
++
?+
-+
--?
---+
--+
+-+
--+
-+
-+
-+
--?
-+
++
?+
++
++
-++
++
++
++
++?
-+
-++
+-+
-?+
-+++
--+
--?
?+
--+++
-+
---+
?++
-+?
-+
-+
+-+
-?
?--++
?+
++
---+
--+
-?
++
-+
-+?
+-+
-+
++
--+
-+
+-?+
?
-++
++
--+
++
--+
?-+
++
-?
+?++
-+
-+
-+
---+?
-+
-+
----?
-++
--++
++
--+
+?
-+
+++
---+
++
++
--
567
567
567
567
567
567
567
567
354
567
567
567
567
567
354
567
567
213
567
567
567
567
567
567
567
567
567
567
567
567
567
213
567
567
354
567
567
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567
567
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567
567
213
567
567
567
567
567
567
354
567
567
567
567
567
567
213
354
567
567
567
567
567
567
567
567
354
567
567
213
567
567
567
567
213
354
567
567
567
354
567
567
567
567
567
567
213
567
567
567
567
0
567
567
567
567
567
567
567
567
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354
0
567
567
567
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567
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567
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354
567
567
213
567
354
567
567
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567
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567
213
567
567
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213
567
567
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213
567
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567
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8897
303
57447
9698
11044
9879
10367
84225
2015
2272
115265
92797
3609
23015
8459
80331
7337
58484
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5217
5199
122953
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55239
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140
1535
59338
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5580
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7305
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1787
53346
54496
5433
5007
217
341405
11078
131118
9308
9997
8148
11325
994
3772
4680
4069
MTMR3
ANXA2P1
NDRG2
PUM1
PAPD7
DDX46
MICU1
ZMYND15
EMR1
FHIT
DDIT4L
HELB
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TPST2
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AZU1
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HELZ2
POLE4
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TTC4
C15orf54
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LETMD1
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TAGLN2
POGLUT1
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SUN1
EIF3B
TMEM106B
TMEM63A
ARHGEF7
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TSC22D3
TRDMT1
TM6SF1
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POLR2D
OSBP
ALDH2
ANKRD33
TRIOBP
DNAJC19
CD83
SCO2
TAF15
DDX42
CDC25B
KCNJ15
CEACAM6
LYZ
++++++
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79895
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1088
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PRKCQ
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EIF4E3
PDE4A
NSFL1C
DUT
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EIF3J
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WDHD1
IL18R1
PRTN3
TMSB10
N4BP2L2
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FCGR2A
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ZNF195
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NAPEPLD
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CAMP
PRUNE2
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LRRK1
NCKAP1L
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SLC22A17
NOV
CHN2
GTF2I
SLC25A17
AKAP1
RAB34
IFT88
ACOX2
ARPC2
HNRNPR
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RAB2A
PTBP1
DKFZP761J1410
OLFM4
TSPAN18
ADCY4
PYCARD
ERP27
IDO1
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SFXN5
CATSPER1
WDR33
ZNF134
SMC2
KIF2A
ZNF519
MAP3K6
CTSZ
BTF3
CDC23
VPS35
C10orf137
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776
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221322
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XKR6
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RNF166
DHX37
IFITM3
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ZNF280C
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UXS1
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PEX5
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GRPEL1
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9.71E-06
9.74E-06
9.76E-06
9.82E-06
9.89E-06
9.90E-06
9.93E-06
1.01E-05
1.01E-05
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55316
23136
84081
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1027
4926
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21
81873
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5889
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4047
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55218
714
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6419
3134
1745
79930
9031
26046
30851
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EPB41L3
NSRP1
ALDOC
CDKN1B
NUMA1
STX12
SLC2A3
CCNDBP1
TAPBP
ZNF770
HERC2
ENC1
TNFSF10
EHBP1
TMC8
PEA15
SLC6A12
SRRT
CLTB
TMEM168
C15orf52
RNASEL
ITPK1
PLEKHF2
ARL1
GEMIN8
RAB35
RBCK1
SLC27A5
DBNDD2
VWA3B
BRWD1
AP1S1
CD47
CEP120
STX16
COX8A
KLHL22
UBE2N
ZNF331
KLRAP1
IKBKAP
AES
RNF13
TRPM6
ZFAND2A
CRADD
LONP1
SRP72
TMUB2
CAPG
TREML1
GSN
TCEB2
CALHM2
NOP14
ACVR1B
MYL12B
CAPZA1
IRX3
PAXBP1
C19orf40
TBX21
GEMIN5
SLC22A23
SHPRH
UBQLN2
SLC22A1
OR52K2
SCPEP1
FLT3
DEAF1
ZFAND3
SPATA2L
TM2D3
CHST3
TBC1D2B
GPC2
ANKMY1
CD1C
ABHD4
RECK
RBM4
SCARB1
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LAMC1
G3BP1
LLGL2
ARMCX1
MTE
DRAM1
ACSM3
ARNT
RUVBL1
TOPORS
EIF4E
CD2AP
NDRG1
KCMF1
MED6
MSRB1
ADAM8
CD300A
TSPY26P
YWHAH
C3orf17
MMS19
FCGR3A
LRRC8D
HTR3A
RWDD2A
ACAP1
TFF3
DUSP23
CMBL
PPP1R14A
TAPT1
BIN2
API5
CXCL5
FXYD5
ABCA3
ARPC5L
SLC10A3
HMGXB4
COMMD1
MGST2
LRP1
BRE
CALCOCO2
NPIPB4
ARID3A
SLC1A5
DAPK1
RAD51C
FBXO46
LSS
RPP30
TKTL1
EXD2
C1QC
FAM199X
SETMAR
HLA-F
DLX1
DOK3
BAZ1B
LTN1
TAX1BP3
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4.313
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4.309
4.308
4.308
4.306
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4.303
4.301
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4.296
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4.296
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4.294
4.294
4.293
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4.289
4.289
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4.288
4.284
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4.283
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4.281
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4.272
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4.27
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4.269
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4.267
4.266
4.264
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4.263
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4.257
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4.254
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4.248
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4.239
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4.219
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4.208
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4.203
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4.198
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1.61E-05
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1.64E-05
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1.64E-05
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1.65E-05
1.67E-05
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1.68E-05
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1.70E-05
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1.72E-05
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1.75E-05
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1.77E-05
1.78E-05
1.78E-05
1.79E-05
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1.80E-05
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1.84E-05
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1.84E-05
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1.85E-05
1.85E-05
1.86E-05
1.88E-05
1.88E-05
1.91E-05
1.93E-05
1.95E-05
1.95E-05
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1.96E-05
1.96E-05
1.97E-05
1.98E-05
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1.98E-05
1.99E-05
2.01E-05
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2.02E-05
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2.04E-05
2.04E-05
2.06E-05
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2.09E-05
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2.13E-05
2.14E-05
2.15E-05
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2.16E-05
2.17E-05
2.18E-05
2.19E-05
2.20E-05
2.21E-05
2.22E-05
2.23E-05
2.24E-05
2.24E-05
2.25E-05
2.25E-05
2.26E-05
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2.27E-05
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2.28E-05
2.28E-05
2.29E-05
2.30E-05
2.32E-05
2.32E-05
2.32E-05
2.33E-05
2.33E-05
2.35E-05
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2.38E-05
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2.38E-05
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2.40E-05
2.41E-05
2.42E-05
2.42E-05
2.43E-05
2.44E-05
2.44E-05
2.45E-05
2.45E-05
2.47E-05
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2.50E-05
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2.51E-05
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2.55E-05
2.56E-05
2.57E-05
2.58E-05
2.58E-05
2.61E-05
2.61E-05
2.62E-05
2.63E-05
2.63E-05
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2.64E-05
2.68E-05
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2.71E-05
2.72E-05
2.73E-05
2.73E-05
2.74E-05
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2.78E-05
2.79E-05
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2.82E-05
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2.88E-05
2.88E-05
2.89E-05
2.89E-05
2.90E-05
2.90E-05
1549
18478
36567
13902
39729
5949
46114
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42044
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10330
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817
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33604
37602
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701
55566
52516
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7797
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55980
26828
34856
38027
61034
46921
47557
61434
15251
59846
26218
51807
3084
3
36793
24820
10848
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25974
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10772
3217
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79066
25842
27034
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11322
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CORO2A
UBTD1
VNN2
CHRNE
JAKMIP2
MMACHC
KCTD20
TRPA1
SRSF10
HOXB7
NPAS2
ANP32A-IT1
NAV3
HSD17B4
FARP2
IPO5
ERMAP
CNPY3
MTX2
ZMYND11
EMD
STX4
SLC7A8
TCEAL1
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SMCR7L
HEATR1
MAP4K3
RAI1
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TTC19
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SUCLG2
SNX27
ALG9
REPIN1
SYNJ2BP
TBC1D10B
SPG7
TMEM134
PLBD2
LTF
ZNF776
PHC1
MBIP
TGIF2
OSTF1
C14orf80
CLASP1
ZNF585A
PCNXL2
CLN5
AMIGO1
TMTC2
TNXB
PATZ1
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CCDC25
EFHC2
AGPAT6
PARVB
RHBDD1
TBC1D9B
SHISA5
NAA20
INPP5F
FAM179B
ARRDC4
PINX1
IGF1R
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FAM50A
SPINT1
MRPS25
PTPN22
IL16
MKRN3
RING1
FANCE
GLS
DHX30
ESCO1
FYB
GAS2L1
POLR2H
CALN1
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DDX52
C7orf41
ZNF83
CST3
NCF2
PPIG
FBLN5
RUNDC3A
TM2D2
GZMK
CYB5R4
ADC
ELL
DUS3L
HHLA3
RPL14
UBXN10
LYSMD4
SMC3
UNC45A
KATNAL1
RFX7
AP1G1
CNOT2
STX5
DCBLD2
IGF2BP3
TNC
MAPKAPK5
ZHX3
IGF1R
PSME2
NUP43
USB1
MYADM
ADAMTS1
IVNS1ABP
MCMBP
VPS18
COA5
PLOD2
ZNF93
USP53
YAE1D1
SLAMF8
TMEM107
TLR6
AARSD1
PLEKHB2
RANGAP1
C16orf52
TTF2
TOM1L2
VAMP8
CYLD
METTL16
ASF1A
ACAD8
FAN1
TMC6
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4.173
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9019
55274
23762
283489
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2889
10060
51026
57584
202309
28956
10645
1063
373
5690
7884
5634
80209
255967
10283
121536
56254
80270
9049
200315
374882
157983
718
129787
8567
36
9026
55303
239
11011
55746
27309
79080
51266
63916
5236
5691
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54865
57403
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55080
54148
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64215
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10175
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10657
1643
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7764
8239
9826
7172
8050
54806
3454
152006
2730
9896
353322
54606
51373
4905
9632
57590
81553
55000
163859
196549
928
84678
2197
85465
57048
57555
144363
5110
55954
115361
55654
29957
10465
246
4891
839
6165
114928
114932
221037
55749
5747
55125
10966
2548
644
220388
23048
79672
1523
55437
10910
C11orf74
LANCL1
NELFCD
WDR82
L3MBTL3
XPNPEP1
FOXC1
AKIP1
STAG2
WNT7A
SAV1
TDRKH
HIPK2
PXN
CDC42SE1
UNC93B1
TOMM40
MICB
MAP2K5
MFSD7
GCDH
UCHL3
CPNE1
LEP
COQ10A
NLRX1
MPZL1
PHF10
OSBP2
CHAMP1
ELK4
RAPGEF1
ABCC9
GOLT1B
ARHGAP21
GAPT
LAMTOR2
CAMKK2
CENPF
TRIM23
PSMB2
SLBP
PRPS2
PROSER1
PAN3
CWC27
AEBP2
RNF20
HSD3B7
AIP
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TMEM205
C9orf66
C3
TMEM18
MADD
ACADSB
HIP1R
GIMAP4
ALOX12
TLK2
NUP133
ZNF330
CCDC86
CLEC1B
ELMO2
PGM1
PSMB3
SLC36A4
RPAP3
CYBRD1
XRN2
CMTM1
WDR18
GPATCH4
RAB22A
SPN
IL1RAP
NABP1
TAPBPL
MRPL39
ARL6IP6
DNAJC1
OR52K1
DHX40
SUCLA2
ZNF700
SLC25A36
PAN2
NASP
CNIH
ZNF17
PTH1R
SUPT20H
KHDRBS1
DDB2
DHRS3
RP5-1043L13.1
ZNF217
USP9X
ARHGEF11
TPMT
PDHX
AHI1
IFNAR1
RNF38
GCLM
FIG4
ANKRD37
DDX56
MRPS17
NSF
SEC24C
WDFY1
FAM49A
TUG1
SDE2
EEF1DP3
CD9
KDM2B
FAU
EPT1
PLSCR3
NLGN2
LYRM5
PCMT1
ZMAT5
GBP4
TMEM127
SLC25A24
PPIH
ALOX15
SLC11A2
CASP6
RPL35A
GPRASP2
MRFAP1L1
JMJD1C
CCAR1
PTK2
CEP192
RAB40B
GAA
BLVRA
CCDC89
FNBP1
FN3KRP
CUX1
STRADB
SUGT1
---+-+-------?-----------++-++++++++
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7257
7257
6376
7257
7257
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7257
7257
7257
7257
7257
7257
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6376
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7257
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6376
7257
7257
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7257
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4.048
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4.046
4.044
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17564
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22878
11068
79960
65981
5189
2030
51304
80765
23457
11019
27243
9736
5443
55745
55002
27030
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134492
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8543
51278
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388610
27352
23075
54622
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CYB561D2
PHF17
CAPRIN2
PEX1
SLC29A1
ZDHHC3
STARD5
ABCB9
LIAS
CHMP2A
USP34
POMC
AP5M1
TMCO3
MLH3
PTPLA
KIAA0226
NADK
PCM1
KLF9
CTIF
DAAM1
NUDCD3
BCKDK
STX17
PCK2
OXSR1
B3GALT4
RBBP7
SIDT2
C10orf11
HES6
ZXDB
DIS3L
SNRK
IMMP2L
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CCDC101
XPO1
HMGCS1
STAMBPL1
IL11RA
GSTP1
CDK5RAP1
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SLC35G1
AP1AR
GPBP1
NUDCD2
ECI2
CXXC4
GOSR1
ARF5
NOL7
ATG3
RSU1
COIL
MGEA5
SCML4
RYK
TRPV2
MTIF2
KIAA1429
EVI5
CD40
EIF4E2
TBK1
MAT2A
UTP6
NFIB
UBASH3B
NR2C2AP
MOB3B
AGGF1
TMEM200A
ARRDC2
TOM1
PFKFB3
VAT1
CD38
KLHL14
RNF219
OLR1
COL8A2
PIP5K1C
MRPS28
TAF10
ADPRH
ACBD3
CSGALNACT2
SFXN1
XPNPEP2
KLF1
HENMT1
NPR2
EFCAB4A
CTRC
UBE4B
PNISR
HNRNPA2B1
MARCH2
UBA2
NXNL2
DHX36
ZNF644
MED15
P2RX2
EFTUD1
HLX
HERC4
WDR13
ALX3
RBM10
RPL23AP82
RNF130
CYB5D1
SSR2
OAS3
RNF175
MYBPC3
TRAPPC2
NUDT16
DNAAF2
MAPKAPK2
MCM2
RANBP2
PUM2
ZNF789
NEFH
ACTL6A
TJP2
ZNF112
SLC43A3
KCNMB4
TCP11L1
SFT2D1
LMO4
IER5
ADIPOR2
RAD17
ASPM
HEG1
SSU72
C2orf47
TRNP1
SGSM3
SWAP70
ARL15
--+--++-+++
-----+-------?-++++-+
+-++++
-----+
-----+
---+-++++-+
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++-+-+
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-------+-+--+----+?------+++-++
------+++++
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5788
29105
51805
55625
6513
5495
404550
4591
116028
6117
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23411
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51000
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90025
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817
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11079
7436
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22822
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PPM1B
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RPRD1A
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GPAA1
PTP4A3
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2.00E-04
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2.10E-04
2.13E-04
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2.14E-04
2.15E-04
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2.16E-04
2.16E-04
2.16E-04
2.16E-04
2.16E-04
2.16E-04
2.17E-04
2.17E-04
2.18E-04
2.18E-04
2.19E-04
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2.20E-04
2.20E-04
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2.21E-04
2.22E-04
2.22E-04
2.23E-04
2.23E-04
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2.27E-04
2.28E-04
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2.30E-04
2.31E-04
2.32E-04
2.32E-04
2.32E-04
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2.33E-04
2.34E-04
2.35E-04
2.35E-04
2.37E-04
2.38E-04
2.39E-04
2.41E-04
2.43E-04
2.44E-04
2.44E-04
2.44E-04
2.45E-04
2.45E-04
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2.47E-04
2.47E-04
2.48E-04
2.48E-04
2.49E-04
2.49E-04
2.50E-04
2.50E-04
2.51E-04
2.52E-04
2.52E-04
2.53E-04
2.55E-04
2.57E-04
2.57E-04
2.58E-04
2.60E-04
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100129828
20
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55799
11183
348645
11260
29087
5321
9497
9526
92105
60314
3303
7086
1998
4241
201134
HES4
PNPLA7
CPSF3
C15orf26
TBC1D15
LZTR1
TP73-AS1
SIRPB1
ABCA2
RHOG
GAPVD1
N4BP2
ITGB3BP
TXNIP
HSPA13
NNAT
MED4
DDX26B
HKR1
UNC119B
PPBP
PDIK1L
MCU
PPP3CB
RAP1GAP
B3GNT1
HAL
CECR1
PPP1R3D
ME3
SYNGR1
PTPRA
MRPL55
IL2RB
IRAK1
BORA
AIFM1
LYAR
ITGA7
C1orf43
DIP2A
HECTD1
TSEN34
GIT2
TRIP4
DLX4
TRIM7
NCOA3
CAD
SCARB2
DOCK5
SIL1
WDR49
EVA1C
CIDECP
IKZF5
PLD1
SWT1
DGKQ
UBE2T
SH3BP5
GNA11
RNF216
SYK
LRRCC1
ZXDC
WASL
MSN
CLEC12A
SNTB1
STT3A
AP2A2
SF3B3
ESD
PIGW
MED1
IL2RA
NDUFB7
ORC2
HBP1
GHDC
TCL1B
KIAA0195
PCGF3
MLLT3
NAPB
TMEM254
PLGRKT
DRAM2
SEC23IP
BIN3
GLIPR1
THAP2
IRF5
ZFP91
SNRNP25
TTC14
STK19
IDH2
ANGEL1
RAB5A
ZNF549
PLD6
SLC30A5
IP6K1
EP400
ZNF410
PIK3R5
LHX6
TNFSF14
ZNF420
SERPINE1
TDRD7
ZNF74
GPR65
ZNF571
SNRPD3
RBM7
C1orf131
NFX1
STAT4
CARD6
SUOX
BTF3L4
RBAK
F8
DDB1
NFATC3
LIPT1
OSBPL3
CTR9
RNASEH2B
PDE4D
FAM120B
GPT2
CACNA2D3
MAP4K5
C22orf34
XPOT
THYN1
PLA2G4A
SLC4A7
MPDU1
INTS4
C12orf10
HSPA1A
TKT
ELF2
MFI2
CEP112
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3.626
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3.619
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2.88E-04
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3.00E-04
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3.06E-04
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3.15E-04
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3.19E-04
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3.20E-04
3.20E-04
3.24E-04
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3.28E-04
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3.46E-04
3.48E-04
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3.49E-04
3.50E-04
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3.56E-04
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3.59E-04
3.60E-04
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4.01E-04
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4.35E-04
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4.39E-04
4.40E-04
4.41E-04
4.43E-04
4.45E-04
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55160
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146894
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765
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ZNF841
SP140L
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JRKL
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SNUPN
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CLINT1
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TOMM34
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SPRYD3
HYAL3
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PARN
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PIK3AP1
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IFT57
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CD209
COL7A1
KIF11
NME2
ABCA1
PRPF3
SYNCRIP
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SLC24A3
UTP18
MKLN1
GLRX3
SMC1A
TMBIM6
HSD17B12
MAN1A2
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DSP
TRIM68
GP1BA
XRCC1
FAM122A
HMGN2P46
SLC2A11
ZNF512B
COL11A2
SF3A3
LRRC16A
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NIPSNAP1
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SDF2L1
ANKRD10
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ELK3
STX1A
PHKA2
LRIG1
PPP2R5A
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TBC1D24
RASA2
STMN2
MYCL
ARHGEF10L
PRMT5
CD300LG
S100P
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339175
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27335
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25850
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ZYX
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DDX3X
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CTSB
DHRS7
VMP1
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GLUL
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GTF2F2
HOMER2
SEC11C
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FHDC1
HPS3
KRT3
APH1A
PRRT1
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TIMM44
TEAD2
TMEM43
CCDC132
CCSER2
MKL2
IL12RB2
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DCTN5
DCPS
OXER1
KIAA1586
PPP6R1
FBXO31
KIF21A
UST
HDHD1
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NFE2L1
XKR8
CHTOP
ZNF681
C14orf159
ZNF254
MTHFR
PHF3
RNF40
STX10
SRXN1
CDK20
SLC2A8
TDP2
STRN
ZBTB7B
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ATG9B
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ZNF136
ZC3H15
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TTL
SLC6A6
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FRY
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SGK1
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XBP1
PAK1
CEP290
DHDDS
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GBA2
CARF
FAM124B
RRAGD
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SLC35A2
AHSP
TEP1
ZFP36L1
CDK11A
CDS2
RHOA
SKIV2L2
METTL2A
SLC15A3
PCOLCE
SCNM1
AFTPH
MRE11A
EIF3K
RGS1
PLD2
LACTB
TPD52L3
OCEL1
ZNF345
ZSCAN16
PMPCA
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3.402
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3.4
3.399
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3.393
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3.392
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3.39
3.389
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3.385
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3.371
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3.361
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3.358
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3.355
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3.339
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3.335
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6.53E-04
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6.62E-04
6.64E-04
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7.00E-04
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7.07E-04
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7.11E-04
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7.14E-04
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7.20E-04
7.24E-04
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7.27E-04
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7.31E-04
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7.54E-04
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7.56E-04
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7.59E-04
7.61E-04
7.62E-04
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7.64E-04
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7.68E-04
7.70E-04
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7.75E-04
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7.82E-04
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123283
8795
80895
9862
2768
1153
55240
11116
55508
4636
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3773
6867
4013
2188
26258
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TAF1D
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PYCR2
TTI1
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CDKAL1
MAP2K3
RABAC1
FBXL3
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ARHGAP1
KATNB1
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RRNAD1
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ZNF839
CTDP1
RHOH
GIMAP8
KIAA1324L
CWC15
TRIT1
TBC1D19
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AQP9
TBCK
DHX34
NUP153
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HEMK1
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IRS2
CCBL1
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KDM4C
TMEM180
GIN1
HMG20A
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BMI1
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PGM2L1
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MTMR14
GNG11
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ZNF224
ANKRD55
KLHL18
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TMEM144
TOMM7
SLC1A4
TRMT10B
CTTN
GNE
GTSE1
KCTD11
PCNT
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PDIA4
DTD2
TPI1
YME1L1
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GTF3C2
NMRK1
MYH4
TSPAN32
PGM3
LRRC40
RP9
ATP5I
BIRC2
MED23
TDRD3
SEC61G
ZNFX1
ASL
CCR10
LPIN1
KREMEN1
IFT46
ZBTB49
GNAL
CNKSR2
CNN2
ANXA3
TMEM185A
AMFR
METTL17
TNFAIP8L1
HTRA4
GPS1
FHL2
ACPT
S100A13
MRPL18
ZNF500
LMBR1
PPHLN1
PTGER4
AQR
NDUFAF6
NELFE
ITPR1
THOC2
SULT1A2
SLC39A11
PIGO
SLC22A16
MAGEF1
FCHSD2
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7257
7257
7257
7257
7257
7257
7257
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GM2A
ATP1A1
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CNTNAP2
IFI16
IGF2R
KLHDC2
BTG1
MTMR11
NUDT16L1
RAD51AP1
TYK2
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SP140L
TMEM67
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1.30E-03
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1.31E-03
1.32E-03
1.32E-03
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1.33E-03
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1.33E-03
1.33E-03
1.34E-03
1.34E-03
1.34E-03
1.35E-03
1.35E-03
1.35E-03
1.35E-03
1.36E-03
1.36E-03
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1.37E-03
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1.38E-03
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1.40E-03
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1.41E-03
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1.42E-03
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1.42E-03
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1.43E-03
1.43E-03
1.44E-03
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1.46E-03
1.46E-03
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1.50E-03
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1.52E-03
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1.64E-03
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1.70E-03
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1.71E-03
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1.72E-03
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1.73E-03
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5432
4048
1611
29942
84134
2346
1717
5959
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55183
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387338
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10384
7158
55577
6609
10501
7404
23583
22895
4644
10768
64848
84919
51118
5810
POLR2C
LTA4H
DAP
PURG
TOMM40L
FOLH1
DHCR7
RDH5
ORMDL1
AARS2
MB21D1
CHST2
DNAJA2
RIF1
ABCB7
KLHL36
TMPO
PDK1
UIMC1
ASNSD1
AMOT
ZNF680
SYTL4
AVPR2
HAAO
NOP16
MPPE1
MLTK
C6orf25
PRPF39
RCAN1
ARMC1
MFSD11
MAP3K7
C9orf40
MRPL43
SON
SENP6
ZNF143
IL18RAP
LRRTM3
RFFL
ARHGAP12
AP2M1
ADSSL1
GAS1
CAPN15
ARMCX4
CUL3
ABHD10
PTPDC1
HELLS
TCTEX1D2
RNFT2
GOT1
KIAA1683
USP6NL
NFIL3
NTRK3
PI3
ZNF653
MAT2B
TRIM46
DCTPP1
FAM104B
TGFB1I1
INTS6
SNAP29
GALNT2
TP53
NDUFAF2
RNF146
COL17A1
ALOX5
TEX2
ASXL1
VWA9
MDH1
GPR55
NUP37
KIF21B
FOSB
PPP1R1B
SLC35F6
TARBP2
CARD9
ZNF232
GCOM1
AK4
MSL2
WRNIP1
STK4
RNF167
RAB27B
SERPINB10
RTN1
EVI5L
MON2
ZC3H8
TMCC3
CNOT11
C2CD2
MSANTD4
FKBP3
AK2
NSUN4
INF2
PLLP
ESAM
PSME3
ZFYVE20
KNTC1
C6orf106
DCAF16
TMEM135
BTBD7
CDC42
UGCG
PTGS1
FAM107B
GRIA3
ATP2A2
ABTB1
ERBB2IP
AIRE
FAM110B
ZC3HC1
TRMT61A
MRPL2
DERL3
ARSK
UBE2Z
UBQLN4
RTN4
ZBTB33
NFKBIZ
BTN3A3
TP53BP1
NAGK
SMPD1
SEMA6B
UTY
SMUG1
RPH3A
MYO5A
AHCYL1
YTHDC2
PPP1R15B
UTP11L
RAD1
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7257
7257
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7257
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7257
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7257
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7257
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6376
7257
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6376
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6376
7257
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7257
6376
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6376
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7257
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7257
7257
6376
7257
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7257
7257
7257
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6376
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7257
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6376
7257
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7257
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7257
7257
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7257
6376
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7257
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7257
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3.133
3.133
3.133
3.132
3.132
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3.13
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3.128
3.128
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3.125
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3.124
3.124
3.124
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3.123
3.122
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3.122
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3.121
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3.117
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3.115
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3.111
3.109
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3.105
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3.102
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3.099
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3.095
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3.093
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3.089
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3.088
3.087
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3.086
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3.085
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3.084
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3.079
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3.075
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3.074
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3.07
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3.069
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3.067
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3.06
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3.059
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1.73E-03
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1.74E-03
1.74E-03
1.74E-03
1.75E-03
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1.76E-03
1.76E-03
1.76E-03
1.76E-03
1.77E-03
1.77E-03
1.78E-03
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1.78E-03
1.78E-03
1.78E-03
1.78E-03
1.78E-03
1.78E-03
1.78E-03
1.78E-03
1.79E-03
1.79E-03
1.79E-03
1.80E-03
1.80E-03
1.80E-03
1.80E-03
1.80E-03
1.81E-03
1.81E-03
1.81E-03
1.82E-03
1.82E-03
1.82E-03
1.82E-03
1.83E-03
1.84E-03
1.85E-03
1.85E-03
1.85E-03
1.87E-03
1.88E-03
1.88E-03
1.89E-03
1.89E-03
1.89E-03
1.90E-03
1.90E-03
1.90E-03
1.92E-03
1.93E-03
1.93E-03
1.93E-03
1.93E-03
1.94E-03
1.94E-03
1.94E-03
1.94E-03
1.94E-03
1.94E-03
1.94E-03
1.95E-03
1.95E-03
1.95E-03
1.95E-03
1.96E-03
1.96E-03
1.96E-03
1.97E-03
1.97E-03
1.97E-03
1.98E-03
1.98E-03
1.98E-03
1.98E-03
1.98E-03
1.98E-03
1.98E-03
1.98E-03
1.99E-03
2.01E-03
2.01E-03
2.01E-03
2.01E-03
2.02E-03
2.02E-03
2.03E-03
2.03E-03
2.03E-03
2.03E-03
2.04E-03
2.04E-03
2.04E-03
2.04E-03
2.04E-03
2.06E-03
2.06E-03
2.06E-03
2.07E-03
2.07E-03
2.07E-03
2.07E-03
2.07E-03
2.08E-03
2.09E-03
2.10E-03
2.10E-03
2.10E-03
2.10E-03
2.11E-03
2.11E-03
2.11E-03
2.11E-03
2.12E-03
2.13E-03
2.14E-03
2.14E-03
2.14E-03
2.14E-03
2.14E-03
2.14E-03
2.14E-03
2.15E-03
2.15E-03
2.15E-03
2.15E-03
2.16E-03
2.16E-03
2.16E-03
2.17E-03
2.17E-03
2.17E-03
2.18E-03
2.18E-03
2.19E-03
2.20E-03
2.20E-03
2.21E-03
2.21E-03
2.22E-03
2.23E-03
2.24E-03
2.24E-03
2.25E-03
2.25E-03
2627
50816
56927
62122
13503
30715
29908
20954
7859
45100
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14199
36827
65604
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54080
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6938
4422
14711
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38784
24648
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81831
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87
3931
7027
374928
51479
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ZNF277
MCM4
NPRL2
TMEM258
SV2B
PLCG2
PDIA6
ELAC2
ALDH5A1
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JMJD8
TIRAP
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SP100
MAX
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RCOR3
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POLH
TNS3
FBXO22
FXYD1
DDI2
PDXP
SKI
PDE4DIP
RETN
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EIF2AK1
AP2A1
NDNL2
SPOPL
EIF4EBP1
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CFD
LMNB2
SRP54
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RUFY1
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CORO1B
TMEM60
TESK1
P2RY14
GIGYF1
VPS25
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RFC3
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ZNF91
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TCHP
U2AF2
FITM1
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TRIM27
TRPM7
HOXC6
GUCA1B
PPAPDC2
KLHL28
RHOBTB3
RNF216P1
DTD1
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SLC38A6
RBM47
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PTPN12
ING3
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LCAT
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SLC25A37
SAMD3
EFCAB11
MRPL32
MPV17
ERCC6L2
GPR125
MLLT6
MAN2B2
GATM
RGPD1
TSNAX
C17orf62
CSTF2T
EXT1
LY6G5C
USP48
NIT1
USP2
RAF1
CILP
STYXL1
MAP1S
MLX
CLCC1
IFNGR2
RENBP
NDUFB10
LCMT1
TSHZ1
PAPD5
TSPAN15
PRPF4
H2AFZ
AP1G2
GATA1
SMTN
PI16
LRRN1
FAM120AOS
SERTAD1
RCSD1
JPX
ZKSCAN7
CRNKL1
TMEM167A
KIF23
SUN3
LAMA5
GUF1
FGF23
RRBP1
TCF7L2
PMS2
PIGT
TTPAL
UBE2L3
FAM210A
BTNL8
MYO18A
KLF13
PPP2R2D
COX6C
CYP20A1
PRPF4B
WDR73
LY6E
MRPL12
BUD31
MTRF1L
OS9
TOP1
CNTNAP1
KCNMA1
ZNF264
SNX20
BEST4
TRMT2A
AKT3
PTPN6
TMEM208
NAT8
ECI1
NDUFB11
C9orf62
PTPN9
RABGAP1L
ARSD
DGKD
MTRR
KCNQ1
FAM178A
TST
FGF1
LOXHD1
MED28
ZFPM1
KCTD15
PID1
KRTAP10-9
NIPAL2
KLHL42
DUSP6
POLR2I
RAB33A
GTF2H4
SH3KBP1
KTN1
GKAP1
HCCS
ZNF14
ZDHHC2
DNAJC4
HORMAD1
DR1
TRIM48
PPFIBP2
CALM3
BNIP1
DNASE2
NUP50
ANO10
RHBDD2
RUVBL2
LINC00518
C17orf70
TSPYL1
TGS1
FAIM
EED
MMP11
RABIF
GNMT
C1orf228
FLJ42393
KPNA1
SEC31A
ANKRD28
SLK
IKBKE
ANXA11
UVSSA
CHCHD5
FKBP2
PDHB
CMTM6
NKIRAS2
ECE1
PTPRN
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+++++++-+++
++++++
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7257
7257
7257
7257
7257
7257
7257
7257
7257
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7257
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6376
7257
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6376
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7257
7257
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7257
7257
7257
7257
7257
7257
7257
7257
7257
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7257
7257
7257
7257
7257
7257
6376
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
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2.888
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2.887
2.886
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2.882
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2.881
2.881
2.881
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2.88
2.88
2.88
2.879
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2.878
2.878
2.878
2.877
2.876
2.875
2.874
2.873
2.873
-2.872
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2.871
2.869
2.869
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2.868
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2.866
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2.857
2.857
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2.855
2.855
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2.852
2.852
2.851
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2.849
2.848
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2.847
2.847
2.847
2.846
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2.845
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2.844
2.842
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2.842
2.841
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2.839
2.838
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2.837
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2.832
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2.83
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2.826
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2.825
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2.819
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2.816
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2.81
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3.88E-03
3.88E-03
3.89E-03
3.90E-03
3.90E-03
3.91E-03
3.92E-03
3.94E-03
3.95E-03
3.95E-03
3.95E-03
3.96E-03
3.96E-03
3.96E-03
3.97E-03
3.97E-03
3.98E-03
3.98E-03
3.98E-03
3.99E-03
4.00E-03
4.01E-03
4.01E-03
4.02E-03
4.03E-03
4.04E-03
4.05E-03
4.07E-03
4.07E-03
4.08E-03
4.08E-03
4.08E-03
4.09E-03
4.09E-03
4.09E-03
4.11E-03
4.12E-03
4.12E-03
4.12E-03
4.13E-03
4.13E-03
4.13E-03
4.13E-03
4.15E-03
4.15E-03
4.15E-03
4.15E-03
4.16E-03
4.16E-03
4.16E-03
4.17E-03
4.17E-03
4.17E-03
4.17E-03
4.17E-03
4.18E-03
4.20E-03
4.21E-03
4.22E-03
4.22E-03
4.23E-03
4.23E-03
4.23E-03
4.24E-03
4.26E-03
4.27E-03
4.27E-03
4.27E-03
4.27E-03
4.27E-03
4.27E-03
4.28E-03
4.30E-03
4.30E-03
4.30E-03
4.32E-03
4.34E-03
4.34E-03
4.36E-03
4.37E-03
4.37E-03
4.38E-03
4.39E-03
4.40E-03
4.40E-03
4.40E-03
4.41E-03
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4.42E-03
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4.44E-03
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4.50E-03
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4.53E-03
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4.55E-03
4.56E-03
4.56E-03
4.58E-03
4.59E-03
4.60E-03
4.61E-03
4.62E-03
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4.65E-03
4.66E-03
4.66E-03
4.66E-03
4.67E-03
4.67E-03
4.68E-03
4.68E-03
4.71E-03
4.71E-03
4.72E-03
4.73E-03
4.74E-03
4.74E-03
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4.75E-03
4.76E-03
4.78E-03
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4.80E-03
4.81E-03
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4.84E-03
4.86E-03
4.87E-03
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4.90E-03
4.92E-03
4.93E-03
4.96E-03
4.96E-03
4.96E-03
4.97E-03
4.97E-03
4.97E-03
4.98E-03
4.99E-03
4.99E-03
44343
27355
35420
36947
10703
38285
39873
3024
21133
5609
58191
58964
7905
16034
8228
43551
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53716
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35712
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32243
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42422
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57415
1964
140710
203054
55858
26585
84300
27252
8289
57678
90135
119032
83955
147807
92370
84890
27183
79730
51287
7770
133619
27178
64395
55131
51005
55840
55227
56063
79830
56852
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8605
5514
54947
29948
51042
51031
131474
8514
7136
27241
28968
2643
83933
6450
51218
79675
23746
10244
149840
51009
3108
1589
64080
22885
55975
10107
8884
23660
442213
51094
220323
10046
132241
5119
63892
3161
11063
54780
84875
1400
5293
51102
10866
3149
11070
55074
7392
1677
6829
9734
93587
835
5799
112724
91614
9728
22869
910
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2520
9589
9550
57158
211
23047
130916
116988
148268
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8916
57536
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51163
2734
257364
51390
10245
22850
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9519
80153
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9536
100129828
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6721
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55325
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8439
57292
53829
55279
57731
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2584
7072
23646
1491
6642
81532
55120
100129828
2342
7148
1454
84312
2770
55790
8654
830
4059
759
64429
C3orf14
EIF1AX
SOGA1
ADCK5
TMEM165
GREM1
MNF1
KLHL20
ARID1A
GPAM
BTBD6
C10orf32
NACAP1
ZNF524
ACPL2
ADO
VPS4A
NSUN7
COA4
ZNF227
PRRC1
IL37
GMCL1
RBM28
AMDHD2
EAF2
LRRC1
TMEM234
ZMYM1
RAD18
CIAO1
PLA2G4C
PPP1R10
LPCAT2
OSGIN1
ZNF593
GLOD4
CHCHD4
KCNAB2
TNNI2
BBS9
SLC6A16
GCH1
HDAC10
SH3BGR
GLRX5
FASTKD1
AIPL1
RABEPK
C20orf196
DERL2
HLA-DMA
CYP21A2
RBKS
ABLIM3
KLHL7
TRIM10
SLC5A6
ZKSCAN5
PTCHD4
ADIPOR1
OAF
MAMLD1
RPL32P3
CHMP1A
THADA
HMMR
SOX30
NSMCE4A
PARP10
CRMP1
PIK3CD
MECR
HCP5
HMGB3
TMEM115
OXR1
USF2
DFFB
SUPT5H
HDAC9
TRMT10A
CASP2
PTPRN2
RDH13
DEPDC7
SECISBP2L
ZNF510
CD1B
MYCT1
GAST
WTAP
ATP6V1G1
JPH2
ALAS1
PDS5B
MTERFD2
AGAP3
ZNF570
SNAPIN
GGPS1
HERC3
KIAA1328
BCL10
DBR1
GLG1
SNX33
AIG1
TIMM17B
ADNP2
ATP1B1
TBPL1
EDC3
UBE2I
PTGES
FCRL3
COX7A2
SREBF2
SRA1
PTPRE
CHD3
UFSP2
EDN1
RAB9A
BAZ2A
NSMAF
KIR2DL2
P2RY13
ZNF654
SPTBN4
SLC29A3
GALK1
TIA1
PLD3
CTH
SNX1
MOB2
FANCL
NXPH2
FNTB
TNXB
CSNK1E
BRMS1L
GNAI1
CSGALNACT1
PDE5A
CAPZA2
BCAM
CA1
ZDHHC6
+++++--+--++-+++
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+++?++
++--++
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++-+++
---++++-+-+-+--++-+++-+++++--++
++++++-+?--
7257
7257
7257
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6376
7257
7257
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7257
7257
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3420
4624
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91050
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6560
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25800
10975
4720
63933
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IQGAP2
LDOC1L
C5orf34
E2F4
SNX22
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MN1
PWWP2B
MTFP1
POP4
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PER1
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ZNF503
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MRVI1
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XK
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VPS26B
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GOPC
WDR37
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TSC22D4
GABRE
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GPBAR1
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HBE1
DSTYK
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ACOT11
EFEMP2
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IKZF3
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CHEK2
FADD
IDH3B
MYH6
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USP15
TNFSF4
CCDC149
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FAM195A
ALKBH3
SLC39A6
UQCR11
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90956
83989
5595
585
84246
2936
133746
10048
79033
51726
78991
79073
84941
1656
3182
23510
51398
9949
10826
3045
63939
10135
9669
2208
80262
55521
2972
150000
79676
199990
55086
8405
5229
7846
246744
64849
22898
8970
23381
64689
51422
10773
153830
158584
57343
60412
157697
5705
56951
8846
54938
84811
256364
126432
114926
29086
399827
54677
79412
57609
5793
10827
955
55364
57461
10296
220972
8418
11062
3996
1394
440073
9258
84910
5281
7038
10229
51639
2243
54518
2617
8898
54508
84162
785
51366
284759
57180
53834
9352
9488
5132
7456
51371
641
51673
200895
11284
25979
3212
7283
54995
27074
10912
27089
3096
22955
92703
5447
10342
9690
440400
30061
51203
80381
51728
51703
10712
56896
79143
9377
9203
22858
64951
127294
199870
55199
10572
53905
4640
83856
26233
51341
9095
26610
5029
27189
51676
25999
5188
2550
768
1305
4131
7189
56950
55761
752
23011
23635
ADCK2
FAM172A
MAPK3
BBS4
MED10
GSR
JMY
RANBP9
ERI3
DNAJB11
PCYOX1L
TMEM109
HSH2D
DDX6
HNRNPAB
KCTD2
WDR83OS
AMMECR1
FAXDC2
HBD
FAM217B
NAMPT
EIF5B
FCER2
C16orf70
TRIM36
BRF1
ABCC13
OGFOD2
C1orf86
CXorf57
SPOP
PGGT1B
TUBA1A
STH
SLC13A3
DENND3
HIST1H2BJ
SMG5
GORASP1
PRKAG2
ZBTB6
RNF145
FAAH2
ZNF304
EXOC4
ERICH1
PSMC5
C5orf15
ALKBH1
SARS2
BUD13
EML3
RINL
SMIM19
BABAM1
FLJ46300
CROT
KREMEN2
DIP2B
PTPRG
FAM114A2
ENTPD6
IMPACT
ISY1
MAEA
MARCH8
CMAHP
DUS4L
LLGL1
CRHR1
IQSEC3
MFHAS1
TMEM87B
PIGF
TG
COQ7
SF3B14
FGA
APBB1IP
GARS
MTMR2
EPB41L4A-AS2
KIAA1109
CACNB4
UBR5
SIRPB2
ACTR3B
FGFRL1
TXNL1
PIGB
PDC
WIPF1
POMP
BLM
TPPP3
DHFRL1
PNKP
DHRS7B
HOXB2
TUBG1
OXSM
LAMP3
GADD45G
UQCRQ
HIVEP1
SCMH1
TMEM183A
POR
TFG
UBE3C
RNASEK
SLC40A1
NUSAP1
CD276
POLR3K
ACSL5
FAM189B
DPYSL5
MBOAT7
COX5A
ZMYM3
ICK
MRPS24
MYOM3
FAM76A
FAM86C1
SIVA1
DUOX1
MYO1A
FSD1L
FBXL6
ZBTB7A
TBX19
ELP4
P2RY2
IL17C
ASB2
CLIP3
PET112
GABBR1
CA9
COL13A1
MAP1B
TRAF6
SMYD2
TTC17
FMNL1
RAB21
SSBP2
-----+
++-++++++++
-----+
-----+
++++-+
+--+++---+-----+
-----+
-++-------+
+++?-+
+--+------+
++---+
++++++
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-+-++-+---+
-++-++
+++-++
++++++
+++++++-+++
-----+
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+++++++-+++
++--++
+++--+
----+++++-+
++++-+
--+--+
+-+?-+-+--+
+-+-+---?-+--+-+
+-++-+
-------+?-+
----------+
--+---+---+
-++--+
---+-++++-++++++
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--+--+++-++
----------+
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--+-++
++++++-++++
-----++--++
++--++
++--++
++-+++++++--+--+--+++
-----++++-+
++-+++
+-+---+---+
-+---+++-++
+++-++
-++-++
+-+--+-++-+
+-+?-+--+++
-+++-+-+-+-+++++
--++++
+-++++
--++-+-++++
+----+++?++
--++-+
---+--+---+
-------++-++++-+
-+-+++
+-+-----+--+++++
++-+-+
-----+----++++-+
+-++++
+-++-+++-++
---+-++-+-+
++-+-+
++-+++
+++--+
---+----------------+
++++++
+-++++
--------+--+++++
+++-++
++-+++
++-+++
++++++
++-+-+
---+---++-++-+++
++-+++
---+-+
--+?-++++++
+++--+
-+++++
++-+++
++++++
------+---++++-+
+-+?---++--
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
6376
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
-2.513
2.513
2.512
-2.512
-2.51
2.51
-2.509
-2.508
-2.508
-2.507
-2.507
-2.506
2.506
-2.506
-2.506
2.506
2.505
-2.504
2.504
2.503
2.503
2.503
-2.502
-2.501
2.5
2.5
2.499
2.499
2.499
-2.499
-2.499
-2.496
2.496
2.496
2.495
2.495
2.495
-2.495
2.494
2.495
-2.494
-2.494
-2.493
-2.492
-2.492
2.492
2.492
-2.492
-2.492
-2.491
-2.49
-2.489
-2.488
2.488
-2.488
-2.487
2.486
-2.485
2.485
-2.484
2.484
-2.484
-2.484
-2.483
2.483
2.482
2.482
2.481
-2.481
2.48
2.479
2.478
2.477
2.476
-2.476
2.476
-2.475
2.474
2.475
-2.474
-2.474
-2.474
2.474
2.474
2.473
-2.472
2.472
-2.471
2.471
-2.471
2.47
2.47
2.469
2.469
-2.469
2.468
-2.468
2.468
2.467
-2.467
-2.466
-2.466
-2.466
2.465
2.465
-2.464
-2.464
2.463
2.463
-2.463
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2.463
2.462
-2.461
2.46
-2.46
2.46
2.459
2.459
2.459
-2.459
-2.458
-2.457
-2.457
2.457
2.457
-2.457
-2.456
2.456
2.455
2.454
2.454
2.454
2.454
-2.453
-2.453
2.453
2.452
-2.452
-2.452
2.452
2.45
2.449
2.449
2.448
-2.448
-2.448
2.448
-2.448
-2.447
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
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+
+
+
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+
+
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+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
-
1.20E-02
1.20E-02
1.20E-02
1.20E-02
1.21E-02
1.21E-02
1.21E-02
1.21E-02
1.22E-02
1.22E-02
1.22E-02
1.22E-02
1.22E-02
1.22E-02
1.22E-02
1.22E-02
1.23E-02
1.23E-02
1.23E-02
1.23E-02
1.23E-02
1.23E-02
1.23E-02
1.24E-02
1.24E-02
1.24E-02
1.24E-02
1.25E-02
1.25E-02
1.25E-02
1.25E-02
1.26E-02
1.26E-02
1.26E-02
1.26E-02
1.26E-02
1.26E-02
1.26E-02
1.26E-02
1.26E-02
1.26E-02
1.26E-02
1.27E-02
1.27E-02
1.27E-02
1.27E-02
1.27E-02
1.27E-02
1.27E-02
1.27E-02
1.28E-02
1.28E-02
1.28E-02
1.28E-02
1.28E-02
1.29E-02
1.29E-02
1.29E-02
1.30E-02
1.30E-02
1.30E-02
1.30E-02
1.30E-02
1.30E-02
1.30E-02
1.31E-02
1.31E-02
1.31E-02
1.31E-02
1.32E-02
1.32E-02
1.32E-02
1.33E-02
1.33E-02
1.33E-02
1.33E-02
1.33E-02
1.33E-02
1.33E-02
1.34E-02
1.34E-02
1.34E-02
1.34E-02
1.34E-02
1.34E-02
1.34E-02
1.34E-02
1.35E-02
1.35E-02
1.35E-02
1.35E-02
1.35E-02
1.36E-02
1.36E-02
1.36E-02
1.36E-02
1.36E-02
1.36E-02
1.36E-02
1.36E-02
1.37E-02
1.37E-02
1.37E-02
1.37E-02
1.37E-02
1.37E-02
1.38E-02
1.38E-02
1.38E-02
1.38E-02
1.38E-02
1.38E-02
1.38E-02
1.39E-02
1.39E-02
1.39E-02
1.39E-02
1.39E-02
1.39E-02
1.39E-02
1.39E-02
1.40E-02
1.40E-02
1.40E-02
1.40E-02
1.40E-02
1.40E-02
1.41E-02
1.41E-02
1.41E-02
1.41E-02
1.41E-02
1.41E-02
1.41E-02
1.42E-02
1.42E-02
1.42E-02
1.42E-02
1.42E-02
1.42E-02
1.42E-02
1.43E-02
1.43E-02
1.43E-02
1.44E-02
1.44E-02
1.44E-02
1.44E-02
1.44E-02
1.44E-02
3915
12344
58834
64505
66150
53197
60425
17332
42853
27521
6484
1176
45071
387
55801
57761
38144
23993
10258
65996
26885
46442
29346
63247
11075
8463
61087
45789
42335
54381
27142
53123
43587
32165
39389
46766
26013
20456
55012
63815
65159
40294
52093
36613
36754
51229
9056
48049
10128
56027
21031
8951
44135
3512
19131
6047
43252
15933
40360
65504
18853
46173
56866
16809
4435
5495
9737
38659
39144
40983
57121
1430
64867
66370
7031
54573
21145
24494
4365
10250
12991
35968
25096
56047
8989
24909
57352
45096
19818
42677
64474
15566
48197
41813
14621
14139
17167
19211
39589
54609
35835
51140
67889
4847
52879
16449
64760
41634
2343
3966
25724
27263
46869
8261
3300
61886
66501
46582
36739
52049
40170
39179
51072
14667
22353
43347
30339
29068
34315
21765
59326
50384
62258
64621
56755
66424
15388
36977
22501
21670
26054
46409
41031
32580
42788
54462
63776
50208
55463
58332
n
n
n
n
n
n
n
n
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n
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n
n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
55249
84649
27439
5255
23415
3619
64423
6416
57110
10401
80760
94235
55669
55662
26277
51108
163786
2078
9114
54210
30833
118
8813
56260
6633
2632
5553
57642
55367
5928
6474
57045
51124
10138
388403
5326
57179
51380
23387
9655
23529
25940
1652
5714
337973
375346
9513
51077
79868
59286
51032
140730
5308
79925
114781
10602
54619
50808
860
85457
10565
30000
4090
9218
146225
8817
83440
819
84975
84864
22937
65005
8935
9463
5678
54762
538
3113
55028
387509
4645
55920
9364
5672
4686
26476
57577
148046
9079
5921
140465
152110
5875
6548
27287
6770
3838
26873
8814
152
7010
51247
23523
203228
10269
7699
8193
90634
64777
4893
8411
284340
9138
2048
427
27236
284656
8566
3434
124944
64978
8829
29929
11226
1429
10589
5836
79365
81533
5354
128977
219844
65095
153364
55779
368
50650
64718
7372
6742
10143
283748
50848
10658
8454
23451
254170
84640
55818
30
YY1AP1
DGAT2
CECR6
PHKA1
KCNH4
INCENP
INF2
MAP2K4
HRASLS
PIAS3
ITIH5
GNG8
MFN1
HIF1AN
TINF2
METTL9
SASS6
ERG
ATP6V0D1
TREM1
NT5C
ADD1
DPM1
C8orf44
SNRPD2
GBE1
PRG2
COL20A1
PIDD
RBBP4
SHOX2
TWSG1
IER3IP1
YAF2
YPEL2
PLAGL2
KIAA1191
CSAD
SIK3
SOCS5
CLCF1
FAM98A
DDT
PSMD8
KRTAP19-6
TMEM110
FXR2
FCF1
ALG13
UBL5
CELA2B
RIMS4
PITX2
SPEF2
BTBD9
CDC42EP3
CCNJ
AK3
RUNX2
KIAA1737
ARFGEF1
TNPO2
SMAD5
VAPA
CMTM2
FGF18
ADPGK
CAMLG
MFSD5
MINA
SCAP
MRPL9
SKAP2
PICK1
PSG9
GRAMD1C
ATP7A
HLA-DPA1
C17orf80
GPR153
MYO5B
RCC2
RAB28
PSG4
NCBP1
OR10J1
KIAA1407
CIRBP-AS1
LDB2
RASA1
MYL6B
NEK10
RABGGTA
SLC9A1
VENTX
STAR
KPNA2
OPLAH
CDKL1
ADRA2C
TEK
PAIP2
CABIN1
C9orf72
ZMPSTE24
ZNF140
DPF1
N4BP2L1
RMND5B
NRAS
EEA1
CXCL17
ARHGEF1
EPHB2
ASAH1
ARFIP1
EPHA10
PDXK
IFIT1
C17orf49
MRPL38
NRP1
ALG6
GALNT6
CRYZ
DRAP1
PYGL
BHLHE41
ITFG1
PLP1
C22orf39
HYLS1
KRI1
MBLAC2
WDR52
ABCC6
ARHGEF3
UNKL
UMPS
SSBP1
CLEC3A
PLA2G4D
F11R
CELF1
CUL1
SF3B1
FBXO33
USP38
KDM3A
ACAA1
++-+++-++++
+++++++++++
+--+-+
+++--+
++++++
+-+--++-++++-+++
++--++
---+------++-+++
++-+++
-+++-+
--+--+-++++
-++--+
+-+--+
-----+
++-+++
--+?++-------+-+
+-+--+
++-+++
-++--+
-----+
+-+---+++++
++++++
+-++--+-----++++
+--+++
+--+-+-++-+
++++-+
--+--++-+++
--+-----+-+
-+--++
+-++-+
-+-+++
++-+++
---++--+++-++++-+++++
+++--+
+++-++
-+-?-++-+++
+-+-++
---+-+------+----+-++
+-+------++
+-++-+
+-+?-++++-+
++-+-+
+-+--+
---++++---+
--+-+-----+
---+-+
++++++
-+++-+
+++++--+--+-+---+-+++
---++++++++
+--+++
-----+
--++-+-++++
--++++++-++
+----++++++
--+--+-----+-+++
++-+-+
+-++++
++-?++
++++++
++++++
+-++-+
+-++-+
+++++++-+++
-+-----++---+--+-++++-++++
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--++------+
--++++
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-+---+
++++-+
++++++
+-++-+
++-+++
++--++
++++++
-+-+++
--+--+
-++?-+
--++-++++-+
+--?-++++++-++-+
-+---+-+++-+++-+
--+-----+--+--+--+--+--++-++?++
+----+
-++--+
+------++--+++++
-+++++
+-++-+
+-++-+
-----+-+--+
+-+--+-+--+-+---++--+
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
2.447
2.447
2.447
2.447
2.447
2.446
2.446
-2.446
2.446
2.445
2.445
-2.444
-2.443
2.443
2.442
2.442
-2.441
2.44
2.439
2.439
-2.438
2.438
-2.437
-2.437
-2.437
2.436
2.436
2.436
-2.436
-2.435
2.435
2.435
-2.435
-2.434
2.434
2.434
-2.434
2.433
2.433
-2.432
2.432
-2.431
-2.431
2.429
2.429
2.429
2.429
-2.429
-2.428
2.427
2.427
2.427
2.427
-2.425
2.425
2.425
-2.425
-2.424
-2.424
-2.423
-2.423
-2.422
2.421
-2.42
2.42
2.419
2.418
-2.418
2.418
-2.418
-2.418
-2.418
2.416
2.416
2.416
-2.416
-2.416
2.415
-2.415
2.415
2.415
-2.415
-2.414
2.414
-2.414
2.414
-2.413
2.412
-2.412
-2.411
2.411
2.41
2.409
2.408
2.408
2.408
2.408
2.408
2.407
2.407
-2.407
-2.407
-2.406
2.405
2.405
-2.405
2.404
-2.403
-2.402
2.402
-2.402
2.401
-2.401
2.401
2.401
2.401
2.401
2.401
2.4
2.4
-2.399
2.398
-2.397
2.396
-2.396
2.396
2.396
-2.396
2.395
2.394
-2.394
-2.394
-2.394
-2.393
-2.392
2.392
2.392
2.391
-2.391
-2.39
2.386
2.386
2.384
2.384
-2.383
-2.382
-2.381
-2.381
-2.38
2.38
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
1.44E-02
1.44E-02
1.44E-02
1.44E-02
1.44E-02
1.44E-02
1.44E-02
1.44E-02
1.45E-02
1.45E-02
1.45E-02
1.45E-02
1.46E-02
1.46E-02
1.46E-02
1.46E-02
1.46E-02
1.47E-02
1.47E-02
1.48E-02
1.48E-02
1.48E-02
1.48E-02
1.48E-02
1.48E-02
1.48E-02
1.49E-02
1.49E-02
1.49E-02
1.49E-02
1.49E-02
1.49E-02
1.49E-02
1.49E-02
1.49E-02
1.49E-02
1.49E-02
1.50E-02
1.50E-02
1.50E-02
1.50E-02
1.51E-02
1.51E-02
1.51E-02
1.51E-02
1.51E-02
1.52E-02
1.52E-02
1.52E-02
1.52E-02
1.52E-02
1.52E-02
1.52E-02
1.53E-02
1.53E-02
1.53E-02
1.53E-02
1.53E-02
1.54E-02
1.54E-02
1.54E-02
1.54E-02
1.55E-02
1.55E-02
1.55E-02
1.56E-02
1.56E-02
1.56E-02
1.56E-02
1.56E-02
1.56E-02
1.56E-02
1.57E-02
1.57E-02
1.57E-02
1.57E-02
1.57E-02
1.57E-02
1.58E-02
1.58E-02
1.58E-02
1.58E-02
1.58E-02
1.58E-02
1.58E-02
1.58E-02
1.58E-02
1.59E-02
1.59E-02
1.59E-02
1.59E-02
1.60E-02
1.60E-02
1.60E-02
1.60E-02
1.60E-02
1.60E-02
1.61E-02
1.61E-02
1.61E-02
1.61E-02
1.61E-02
1.61E-02
1.62E-02
1.62E-02
1.62E-02
1.62E-02
1.63E-02
1.63E-02
1.63E-02
1.63E-02
1.63E-02
1.63E-02
1.63E-02
1.64E-02
1.64E-02
1.64E-02
1.64E-02
1.64E-02
1.64E-02
1.64E-02
1.65E-02
1.65E-02
1.66E-02
1.66E-02
1.66E-02
1.66E-02
1.66E-02
1.66E-02
1.67E-02
1.67E-02
1.67E-02
1.67E-02
1.67E-02
1.68E-02
1.68E-02
1.68E-02
1.68E-02
1.68E-02
1.68E-02
1.70E-02
1.70E-02
1.71E-02
1.71E-02
1.72E-02
1.72E-02
1.73E-02
1.73E-02
1.73E-02
1.73E-02
8906
42566
56915
3903
17313
63601
22153
60492
4723
15830
17636
37015
33936
57298
67097
42595
44865
7408
16395
26631
34835
45965
15721
596
58905
16574
15567
18835
2133
44807
48782
64073
20481
54614
58456
36467
65406
22452
10818
46738
7158
58200
4742
6367
54331
12843
18911
46020
37296
49230
48191
24719
11113
21268
37034
43537
10107
48789
52097
39146
53925
46850
4697
787
51200
58621
61414
34168
39634
31192
12373
33415
62079
26821
29019
31585
46866
36189
56522
60076
41845
40137
7231
42216
61576
46587
62085
18677
57617
16738
10375
16531
57645
36030
7491
23532
50883
57714
24505
48939
15396
34010
9192
51962
42049
20079
3717
53018
3670
3899
18334
17667
51454
41072
19900
39690
16147
33342
64430
46337
9751
31992
59319
2294
24799
53252
53440
24602
37698
49629
2675
44759
27631
20198
52158
1559
42688
49512
847
16315
57934
59552
32193
64992
28383
7294
37369
29936
16755
56201
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
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n
n
n
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n
n
n
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n
n
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n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
5860
55509
283899
134637
80221
9197
7059
339366
55850
142940
79654
122769
4771
283401
9780
6443
84221
11231
55786
5589
10557
143686
91694
728
92667
83452
131096
407738
64834
1427
1798
991
5954
10238
1893
7873
1602
1113
3916
5467
5160
51283
4714
5686
3875
79943
10942
64427
83862
10004
3782
84451
9754
10123
221895
26575
81502
8560
23526
51253
55210
80264
23219
57157
51170
151963
5724
51571
10454
51691
11104
55656
57532
221491
124995
51633
9086
3981
9871
1418
25900
8364
9687
55974
147172
8533
55173
55330
479
163590
23625
6093
4111
5360
126626
2299
78995
54344
5371
55814
784
114881
2358
64860
51014
1135
4121
533
8869
28970
1211
51531
51574
6718
7752
26073
389337
6339
63891
7350
389125
25988
282973
100
54890
4798
474382
140836
246184
5536
376940
374395
60
79368
5516
5361
57380
9450
10111
6790
3068
6744
51699
27181
115330
6256
23338
84340
9586
10618
QDPR
BATF3
INO80E
ADAT2
ACSF2
SLC33A1
THBS3
ADAMTSL5
USE1
TRUB1
HECTD3
LRR1
NF2
FLJ33996
PIEZO1
SGCB
SPATC1L
SEC63
ZNF415
PRKCSH
RPP38
SESN3
LONRF1
C5AR1
MGME1
RAB33B
KCNH8
FAM19A1
ELOVL1
CRYGS
DPAGT1
CDC20
RCN1
DCAF7
ECM1
MANF
DACH1
CHGA
LAMP1
PPARD
PDHA1
BFAR
NDUFB8
PSMA5
KRT18
ZNF696
PRSS21
TTC31
TMEM120A
NAALADL1
KCNN3
MLK4
STARD8
ARL4C
JAZF1
RGS17
HM13
DEGS1
HMHA1
MRPL37
ATAD3A
ZNF430
FBXO28
PHTF2
HSD17B11
MB21D2
PTAFR
FAM49B
TAB1
NAA38
KATNA1
INTS8
NUFIP2
C6orf1
MRPL10
OTUD6B
EIF1AY
LIG4
SEC24D
CRYGA
IFFO1
HIST1H4C
GREB1
SLC50A1
LRRC37BP1
COPS3
MRPS10
BLOC1S4
ATP12A
TOR1AIP2
FAM89B
ROCK1
MAGEA12
PLTP
GABPB2
FOXI1
C17orf53
DPM3
PML
BDP1
CACNB3
OSBPL7
FPR2
ARMCX5
TMED7
CHRNA2
MAN1A1
ATP6V0B
ST3GAL5
C11orf54
CLTA
C9orf156
LARP7
AKR1D1
ZNF200
POLDIP2
ARHGEF37
SCNN1D
RNF123
UCP1
MUSTN1
HINFP
JAKMIP3
ADA
ALKBH5
NFRKB
H2AFB1
BANF2
CDC26
PPP5C
ZC3H6
TMEM179B
ACTB
FCRL2
PPP2CB
PLXNA1
MRS2
LY86
RAD50
AURKA
HDGF
SSFA2
VPS29
SIGLEC8
GPR146
RXRA
PHF15
GFM2
CREB5
TGOLN2
-----+
+--+++
+++-++
-++--+-+--+
+-+--+-+--+
+-+-++
---+--++--++-+++
--+-+--+-++
-++-++
++--++
++++-+
-----+
--+-+--++------+
--++-++++++-++++
++++-+
++++++
+-++-+
--+?-++-+++
+++--+
+---------+
-----+
---+--+-+++
++++++
-----+
+-++-+
++++++
+--+-+
--+----+----+-------+
---+-----++
---?-+
-----+
++-+++
++++-+
+-++++
+++--+
++-+++
+-++-+
++++-+
+++++++++++
-+++++
++++-+
-----+
---+-+
---+-+
--+----++-------++-++
++-++-+++-+
+-++++
---?-+
--+--+--+++
--+--++++++-++-+
+-++-+
---?----+-++++++-+--+
+++++++---+
-+-++++--++
-+++++
++++-+
---++---+------++++-+
+-++-+
++-+++-+?-+++-++
++-+++
------++--+
-+-+++
-+++++
-+-+++
++---++--++
++-+-+
+-+-++
--+--+-++-+
+++-++
+-++++
+++--+
++-+-+
--++--+++-+
---+-+
--+--++--++
--+--+----++--++
---+-+
++-+++----+---++
---+-+
++--++
-+-+-+---------+-++++
+++-++
---+-+-++++
+-+---+++-+
++++++
---++--+--+----+
--+----++-+
---?----+-++-+++-++-+
+-+++++++-+
++-++++++-+
++---+
--+--+-+?-+
+--?++
7257
7257
7257
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55287
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53831
83734
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25909
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2491
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GPR84
ATG10
ATF2
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IGF2BP2
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PIK3C2A
DTWD2
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KDM4A
COQ9
CAMTA2
FEN1
CREBL2
ZNF761
AP1B1
ZADH2
QPRT
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UNC119
RBMS2
STK38L
EREG
MANBA
CPD
GNL3L
CEP85L
SUMF1
CCBL2
C16orf13
DYNLT3
RPRM
FBLN7
ZFY
IFNAR2
PHLDB1
REV3L
ABHD14B
MMAB
SCAF8
ANO7
BPHL
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LNPEP
ZNF821
PRPF38B
ARF4
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CPSF2
KLHL2
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RNF41
PPP1R12B
CIR1
KCNK12
FAM89A
PGK1
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GLI3
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EPDR1
WDR44
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GPR35
SLC25A4
C6orf211
RNF207
LIMA1
RPL23
HDHD3
DNAJB5
NDUFV3
ARID4B
WDR55
STRN3
PTTG1IP
LINC00615
SORCS1
STXBP1
PMM2
NCAPG2
POLQ
KDM3B
LOC286016
C19orf24
NEK3
ZNF177
SMIM3
ITGA5
ZNF37A
SLC25A10
MRPL21
PANK4
CTLA4
BPESC1
ZNF32
SQLE
ZCCHC24
DNAJC6
HACL1
SNRPB2
RPGR
PRPF40A
TMEM53
EIF5A
TRAPPC11
MVD
CDH11
HUS1
ATAD2
DIP2C
MFSD2B
EXOSC3
SCHIP1
FEM1A
TLR7
CIDEA
CENPI
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2.25
2.25
2.25
-2.249
-2.249
2.249
-2.249
-2.248
2.247
2.247
2.247
-2.246
+
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-
2.10E-02
2.10E-02
2.10E-02
2.11E-02
2.11E-02
2.11E-02
2.12E-02
2.12E-02
2.12E-02
2.12E-02
2.13E-02
2.13E-02
2.13E-02
2.14E-02
2.14E-02
2.14E-02
2.14E-02
2.14E-02
2.15E-02
2.15E-02
2.15E-02
2.15E-02
2.15E-02
2.15E-02
2.15E-02
2.16E-02
2.16E-02
2.16E-02
2.16E-02
2.16E-02
2.16E-02
2.16E-02
2.17E-02
2.17E-02
2.17E-02
2.17E-02
2.17E-02
2.18E-02
2.18E-02
2.19E-02
2.20E-02
2.20E-02
2.20E-02
2.20E-02
2.21E-02
2.21E-02
2.21E-02
2.22E-02
2.22E-02
2.22E-02
2.22E-02
2.22E-02
2.22E-02
2.23E-02
2.23E-02
2.23E-02
2.24E-02
2.24E-02
2.25E-02
2.25E-02
2.25E-02
2.25E-02
2.25E-02
2.26E-02
2.26E-02
2.26E-02
2.26E-02
2.27E-02
2.27E-02
2.28E-02
2.28E-02
2.28E-02
2.28E-02
2.29E-02
2.29E-02
2.29E-02
2.29E-02
2.29E-02
2.29E-02
2.29E-02
2.29E-02
2.29E-02
2.30E-02
2.30E-02
2.30E-02
2.30E-02
2.31E-02
2.31E-02
2.32E-02
2.32E-02
2.32E-02
2.32E-02
2.33E-02
2.34E-02
2.34E-02
2.34E-02
2.34E-02
2.34E-02
2.34E-02
2.36E-02
2.36E-02
2.36E-02
2.37E-02
2.37E-02
2.37E-02
2.38E-02
2.38E-02
2.38E-02
2.39E-02
2.39E-02
2.39E-02
2.40E-02
2.40E-02
2.40E-02
2.40E-02
2.40E-02
2.40E-02
2.40E-02
2.41E-02
2.41E-02
2.41E-02
2.41E-02
2.41E-02
2.41E-02
2.42E-02
2.42E-02
2.43E-02
2.43E-02
2.43E-02
2.43E-02
2.43E-02
2.43E-02
2.44E-02
2.44E-02
2.44E-02
2.44E-02
2.44E-02
2.44E-02
2.44E-02
2.45E-02
2.45E-02
2.45E-02
2.45E-02
2.45E-02
2.45E-02
2.46E-02
2.46E-02
2.46E-02
2.46E-02
2.47E-02
6867
12896
29762
53160
10065
36345
16444
10553
11411
48052
4644
44335
43061
61612
21563
45937
4363
37764
17531
23676
30449
51729
13116
25950
39375
3669
20131
408
16011
58079
46939
3632
7945
58556
4760
26196
20288
18532
61681
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2406
62238
13800
60029
39606
67552
5390
25857
3197
9526
10765
42881
66302
10696
27497
18987
57051
53376
4009
7854
23465
65908
47468
17241
3279
58797
54028
7225
12875
25302
12656
37738
4692
42706
23108
58721
49128
62303
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44578
3150
59460
46069
12614
23627
20196
4493
28723
2790
59249
59841
39067
47697
52074
62182
27656
37344
4888
12126
24269
54661
60022
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9561
36729
32076
18511
59804
48036
56813
19196
37917
55831
29189
6410
40541
19780
19881
27700
17275
62981
38342
6644
16915
64138
45372
40650
59404
66445
54641
56802
38607
33028
50247
18350
48976
29855
21806
21875
27365
64819
66344
7451
59816
12800
27885
64928
63804
53606
1876
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51326
51564
11017
55194
261726
442454
8776
7862
56127
25936
4297
1690
3725
222256
23039
444
7760
8500
6674
285848
84924
400566
6397
150094
55190
6884
1230
64926
7799
2821
132720
2534
145482
5518
7549
90
30827
384
49854
84310
137075
22902
6451
22882
389058
53349
58155
1444
947
23269
23586
167227
10189
29907
51667
26057
220082
54956
905
63895
54929
23291
553115
221833
1601
5709
196740
2055
85440
55717
10605
54581
28972
9616
60312
55006
1785
5093
35
148022
246734
57050
56928
23065
5982
1393
79187
29800
55039
10621
10477
84722
112849
3232
256586
4130
55512
22936
672
22827
7067
27098
100129828
25798
29855
84839
84069
84174
9425
349136
90407
4236
825
155054
64897
56990
2766
9522
26531
113130
1051
26088
4343
64854
79019
1728
136647
91612
144165
9474
644150
2630
10484
23020
129790
10087
137695
4311
23228
8642
169355
83746
65985
84281
51297
64386
286410
55148
387700
22926
ARL17A
HDAC7
SNRNP27
EVA1B
TIPRL
LOC442454
MTMR1
BRPF1
PCDHB10
NSL1
KMT2A
COCH
JUN
CDHR3
XPO7
ASPH
ZNF213
PPFIA1
SPAG1
PNPLA1
ZNF566
C17orf97
SEC14L1
SIK1
NUDT11
TAF13
CCR1
RASAL3
PRDM2
GPI
C4orf32
FYN
PTGR2
PPP2R1A
ZNF2
ACVR1
CXXC1
ARG2
ZBTB21
C7orf50
CLDN23
RUFY3
SH3BGRL
ZHX2
SP5
ZFYVE1
PTBP2
CSHL1
CD34
MGA
DDX58
DCP2
ALYREF
SNX15
NUB1
ANKRD17
SPERT
PARP16
CCNT2
PIEZO2
TMEM161A
FBXW11
PEF1
SP8
DAB2
PSMD3
VSTM4
CLN8
DOCK7
WDR11
PAIP1
SCAND2P
SPCS1
RNF7
AFAP1
TRMT61B
DNM2
PCBP1
ACADS
TICAM1
NPCDR1
UTP3
SPPL2B
EMC1
RFC2
CRHBP
FSD1
ZDHHC1
TRMT12
POLR3F
UBE2E3
PSRC1
L3HYPDH
HOXD3
LYSMD2
MAP1A
SMPD3
ELL2
BRCA1
PUF60
THRA
CLUL1
PDZD11
BRI3
UBN1
RAX2
PLEKHN1
SLA2
CDYL
WDR86
TMEM41A
MFAP1
CAPN3
ZNF425
C12orf43
CDC42SE2
GMPR
SCAMP1
OR11A1
CDCA5
CEBPB
GGA1
MOV10
USP46
CENPM
NQO1
MPLKIP
CHURC1
PRICKLE1
ATG5
WIPF3
GBAP1
SEC23A
SNRNP200
C7orf13
COL4A3BP
TMEM68
MME
PLCL2
DCHS1
IDO2
L3MBTL2
AACS
C2orf88
BPIFA1
MMP25
ATP11C
UBR7
SLC16A12
ATF6
-+--+-------+--++++-+
-++++-----+-+-------+
+++-++
-+++++
++--+-----+--+++
---?-++-+++++-+++-+-+
--++++
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--+--++--++
------+--++
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--+?--+++++
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++-+++
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------++-++
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++++++
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--++-+---------+
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----++
++--++++--+
++++++
+-+--+-+--+++--+
+-++++
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
-2.245
-2.245
-2.245
2.245
2.245
-2.244
-2.244
-2.243
2.243
2.243
-2.243
-2.243
2.243
-2.243
2.242
2.242
2.241
2.241
2.241
2.241
-2.24
-2.24
-2.24
-2.24
-2.24
-2.239
2.239
2.238
2.238
2.238
2.238
2.237
-2.237
-2.237
-2.237
-2.236
-2.236
2.236
-2.234
2.234
2.234
-2.234
-2.233
-2.232
2.232
2.231
-2.231
2.23
-2.23
2.23
2.229
-2.229
-2.228
2.227
2.227
-2.227
2.226
-2.225
-2.225
2.224
-2.224
2.224
2.224
2.224
2.222
-2.222
2.222
-2.222
-2.222
2.221
2.221
-2.221
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2.219
2.219
-2.218
2.218
-2.216
2.216
2.215
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2.213
2.213
2.213
2.212
-2.211
-2.21
2.209
2.209
-2.208
2.208
-2.208
2.207
2.207
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-2.206
-2.206
-2.206
2.206
2.206
2.205
2.205
2.205
2.203
2.203
-2.203
-2.203
-2.202
-2.202
2.202
-2.201
-2.201
-2.201
2.2
2.2
2.2
-2.198
2.198
2.197
2.197
2.197
-2.197
2.196
-2.196
-2.196
-2.196
-2.196
2.195
2.194
-2.193
-2.193
-2.193
2.193
-2.192
2.192
-2.191
-2.19
2.19
-2.19
-2.189
-2.189
2.188
2.188
-2.188
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2.187
2.187
+
+
+
+
+
+
+
+
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+
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2.48E-02
2.48E-02
2.48E-02
2.48E-02
2.48E-02
2.48E-02
2.49E-02
2.49E-02
2.49E-02
2.49E-02
2.49E-02
2.49E-02
2.49E-02
2.49E-02
2.50E-02
2.50E-02
2.50E-02
2.50E-02
2.50E-02
2.50E-02
2.51E-02
2.51E-02
2.51E-02
2.51E-02
2.51E-02
2.51E-02
2.52E-02
2.52E-02
2.52E-02
2.52E-02
2.53E-02
2.53E-02
2.53E-02
2.53E-02
2.53E-02
2.53E-02
2.53E-02
2.54E-02
2.55E-02
2.55E-02
2.55E-02
2.55E-02
2.55E-02
2.56E-02
2.56E-02
2.57E-02
2.57E-02
2.57E-02
2.58E-02
2.58E-02
2.58E-02
2.58E-02
2.59E-02
2.59E-02
2.60E-02
2.60E-02
2.60E-02
2.61E-02
2.61E-02
2.61E-02
2.61E-02
2.61E-02
2.62E-02
2.62E-02
2.63E-02
2.63E-02
2.63E-02
2.63E-02
2.63E-02
2.63E-02
2.63E-02
2.63E-02
2.64E-02
2.65E-02
2.65E-02
2.66E-02
2.66E-02
2.67E-02
2.67E-02
2.68E-02
2.68E-02
2.68E-02
2.69E-02
2.69E-02
2.69E-02
2.69E-02
2.69E-02
2.70E-02
2.71E-02
2.71E-02
2.72E-02
2.72E-02
2.73E-02
2.73E-02
2.73E-02
2.73E-02
2.73E-02
2.73E-02
2.74E-02
2.74E-02
2.74E-02
2.74E-02
2.74E-02
2.74E-02
2.74E-02
2.75E-02
2.76E-02
2.76E-02
2.76E-02
2.76E-02
2.77E-02
2.77E-02
2.77E-02
2.77E-02
2.77E-02
2.78E-02
2.78E-02
2.78E-02
2.78E-02
2.79E-02
2.80E-02
2.80E-02
2.80E-02
2.81E-02
2.81E-02
2.81E-02
2.81E-02
2.81E-02
2.81E-02
2.81E-02
2.82E-02
2.82E-02
2.83E-02
2.83E-02
2.83E-02
2.83E-02
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7559
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84901
10383
5095
9077
1349
4496
79634
9920
10483
22900
51510
9695
23265
3676
388
137492
PTGIR
MOB4
PIP4K2B
CCNH
TUBA3FP
C17orf85
KLRG1
FES
PGAP2
CACNB1
NCOR2
SLC41A3
C11orf45
RANBP3
MITD1
SEC22A
SORL1
ERCC2
ZKSCAN4
COG1
SLC22A18
CENPL
ZBTB8OS
COL23A1
C9orf114
CUTC
MAP2K2
CDC123
IFNA4
RFX1
GBP3
APOL4
PTGES2
DOCK3
FCRL5
LMF2
SYN2
INTS12
TRMT2B
GTPBP1
ITGAX
MDC1
HDX
POFUT2
LOC554206
COPS5
TNIP1
PROCR
HRSP12
TSR2
DFFA
DHRS1
GTF2IRD1
CCDC97
HIST2H2BE
DUS1L
SLC25A46
HEMGN
ZNF133
CNTNAP5
ATL2
HSBP1
CD2BP2
CTXN1
GPR119
PPP2R5B
MGRN1
FLAD1
UBE2J2
ITLN1
DVL2
GTF2H1
CALU
VSX2
MCM6
RGR
IL15RA
INTS9
VPS37B
ANKRD44
PRKAB1
RBM18
ISL2
THOP1
COPB2
NAPRT1
NDUFS8
EPHA3
SRRM2
MPP7
POFUT1
SPACA3
CSNK2B
CDH2
ISLR
DEPDC5
PHKG2
RNASEH2C
MRPL49
STRAP
FOLR3
TMEM186
NKX3-1
PIGY
ZNF271
GRINA
B4GALT4
CRELD2
SDF4
C19orf66
PSMA3
AP3S2
AGR3
CHODL
THG1L
C1orf101
EAF1
NECAB3
PSMF1
C18orf32
HSPA14
OR51D1
SMARCE1
USP6
RRP7B
RPS6KA2
CRAT
ZNF565
CMPK2
TTLL4
ZNF12
FANCB
RP3-412A9.11
ZSWIM3
NFATC2IP
TUBB4B
PCCA
DIRAS3
COX7B
MT1H
SCRN3
KBTBD11
SEC23B
CARD8
CHMP5
EDEM1
EXOC7
ITGA4
RHOB
VPS37A
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6376
7257
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6376
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7257
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6376
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7257
7257
7257
7257
7257
6376
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7257
7257
7257
6376
7257
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7257
7257
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7257
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2.058
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2.057
2.057
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2.056
2.055
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2.054
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2.052
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2.051
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-2.05
2.05
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2.049
2.049
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2.048
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2.047
2.047
2.047
2.047
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2.045
2.045
2.044
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2.041
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2.04
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2.038
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2.034
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2.032
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2.031
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2.03
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2.029
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2.028
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2.028
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2.027
2.027
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2.026
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2.025
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2.024
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2.023
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2.022
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2.021
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2.02
2.02
2.019
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2.018
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2.018
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2.016
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2.015
2.015
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2.014
2.014
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2.013
2.012
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2.009
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2.005
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2.003
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2
1.999
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3.96E-02
3.97E-02
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3.98E-02
3.98E-02
3.98E-02
4.00E-02
4.00E-02
4.00E-02
4.01E-02
4.01E-02
4.01E-02
4.02E-02
4.02E-02
4.02E-02
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4.03E-02
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4.04E-02
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4.04E-02
4.05E-02
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4.06E-02
4.06E-02
4.06E-02
4.07E-02
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4.07E-02
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4.08E-02
4.09E-02
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4.09E-02
4.11E-02
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4.12E-02
4.13E-02
4.13E-02
4.13E-02
4.14E-02
4.14E-02
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4.16E-02
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4.17E-02
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4.18E-02
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4.20E-02
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4.21E-02
4.21E-02
4.21E-02
4.22E-02
4.23E-02
4.23E-02
4.23E-02
4.23E-02
4.23E-02
4.23E-02
4.24E-02
4.25E-02
4.25E-02
4.25E-02
4.25E-02
4.26E-02
4.26E-02
4.27E-02
4.27E-02
4.27E-02
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4.27E-02
4.28E-02
4.28E-02
4.29E-02
4.29E-02
4.29E-02
4.30E-02
4.30E-02
4.30E-02
4.31E-02
4.31E-02
4.32E-02
4.33E-02
4.33E-02
4.33E-02
4.34E-02
4.34E-02
4.34E-02
4.35E-02
4.35E-02
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4.38E-02
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4.40E-02
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4.41E-02
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4.41E-02
4.41E-02
4.41E-02
4.42E-02
4.44E-02
4.46E-02
4.46E-02
4.47E-02
4.47E-02
4.48E-02
4.49E-02
4.50E-02
4.50E-02
4.50E-02
4.51E-02
4.52E-02
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4.54E-02
4.54E-02
4.55E-02
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4.56E-02
4.56E-02
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4.60E-02
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11545
58813
24125
46315
10991
54352
19160
16510
66607
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39196
46164
68338
31558
17011
55533
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7678
57143
51115
7127
1233
96610
115024
1997
64785
80207
116362
84124
997
221545
29127
2944
8973
27285
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9768
8655
128
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3123
43
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359948
6050
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122618
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6902
1024
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727
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57348
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127064
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50801
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93323
25805
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9562
914
25927
8339
56986
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60672
11093
79087
10920
149373
283232
55132
123775
2582
55582
5863
55294
55667
202459
23400
3433
4247
51046
27010
7465
131578
90589
113828
128989
388007
551
22807
5814
57827
124565
84285
64130
3621
127018
1261
83479
404037
5713
7307
9929
55177
10521
10664
8351
84445
114885
9282
11065
147700
5971
114771
9133
64403
ZNF124
ADCK1
RMDN1
TNFAIP2
CCR4
LL22NC03-80A10.6
NT5C3B
ELF1
GINS3
OPA3
RBP7
ZNF394
CDC34
C6orf136
RACGAP1
GSTM1
CHRNA6
TEKT2
CHRNB1
KIAA0101
DYNLL1
ADH5
FRAT2
HLA-DRB1
ACHE
CD48
FAF2
ERCC8
PSMD10
IRF2BP2
RNH1
NDUFB3
B3GNTL1
LIG3
NIF3L1
WDR47
PLD4
TRERF1
GDF1
IL32
ATP5J
ZBTB16
SLC30A9
CD320
ABCD3
OSBPL6
TROVE2
CRKL
WASF2
PLCH2
KPNA3
GLUD1
CDO1
VN1R2
ACSM5
ACSL3
THEG
CLIC5
SERINC3
TBCA
CDK8
CPNE5
STRN4
TRIM5
ACTRT1
SNX20
RHOBTB2
TCP10L
ALLC
SGCE
UFC1
C5
CAMKK1
KLHDC8B
FAM211A
TRIM35
TTYH1
NPEPL1
SFSWAP
RAP1A
DMWD
MAPK15
MDGA1
OR2T12
PPP1R9B
KCNK4
NTHL1
ICAM3
HAUS8
BAMBI
CD59
MINPP1
CD2
CNRIP1
HIST1H2BG
DTWD1
TTK
MIIP
ADAMTS13
ALG12
COPS8
RP5-1097F14.3
TMEM80
LARP1B
C16orf46
GALE
KIF27
RGL2
FBXW7
DENND4C
OSTCP1
ATP13A2
IFIT2
MGAT2
ST8SIA3
TPK1
WEE1
LRRC15
ZNF625
FAM83F
TANGO2
SERPINA13P
AVP
IKZF2
PURB
C6orf47
SLC38A10
EIF1AD
LIN7B
ING1
LYPLAL1
CNGA3
DDX59
HAPLN4
PSMD7
U2AF1
JOSD1
RMDN3
DDX17
CTCF
HIST1H3D
LZTS2
OSBPL11
MED14
UBE2C
KLC3
RELB
PGLYRP3
CCNB2
CDH24
--++------+
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51642
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80350
55198
54386
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PPT2
SLC39A13
ARHGAP27
WAS
C20orf195
DNAJC8
RC3H2
OR1L8
CASP10
GGT7
MST1
KCNJ14
INTU
NELL1
RARRES2
SEMA4B
NEIL2
OR52D1
LHFP
CHMP3
C19orf53
B4GALT3
CDC20B
SPP1
NARF
ATRAID
CCNJL
SBNO2
TMEM126A
ETFB
E4F1
NCOR1
CA13
SLC10A7
EID3
FGF2
RFWD2
KRT23
DCAF12
UPB1
SLC35A5
TMEM191A
CGRRF1
CEP164
SHOC2
SCFD1
PDCD10
SHFM1
FAM174B
GLIS3
REL
RNF121
SLC41A1
ASTL
DUSP19
ZNF585B
RTF1
TMX3
CDK3
RNPEPL1
SEMA3C
ZMIZ2
KMT2E
C7orf10
AFAP1L1
PSD4
ANKS1B
CCDC35
RIN3
TMEM259
SC5D
SRSF11
RTP2
C5orf22
PDCL
PCDH9
YTHDF3
MMRN1
RHBDL2
PLEKHG7
MYO1F
C1GALT1C1
JARID2
POTEA
PTTG2
PIM1
C17orf54
C4orf36
PDE4C
TTLL5
PDGFB
BCAT2
C19orf57
NMNAT1
H6PD
SLC30A6
MPC2
APCS
EIF1
RBM33
CLRN1
KRAS
C2orf82
RNF14
P4HTM
SFI1
AKAP12
MIER1
KMT2C
CD46
NCK1
CD44
UBAP1
NICN1
DDX11
GPNMB
ELMSAN1
BPGM
FLJ37307
ZNF282
RTN4RL1
GPX2
CTDSPL2
CC2D1A
ZNF230
PTEN
LEPR
NFKB2
JOSD2
LIME1
FTSJD2
CDC25C
MCM5
NSG2
RPE
SYCP2
NDRG3
RPGRIP1
ZDHHC24
EDDM3A
TALDO1
GATSL3
FAM110A
FAM210B
MRPL48
PITPNM2
LPAL2
APPL2
TERF2IP
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7257
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7.94E-02
7.94E-02
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7.94E-02
7.96E-02
7.96E-02
7.97E-02
7.97E-02
7.97E-02
7.98E-02
8.00E-02
8.00E-02
8.03E-02
8.04E-02
8.05E-02
8.05E-02
8.05E-02
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8.06E-02
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8.09E-02
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8.10E-02
8.10E-02
8.13E-02
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8.13E-02
8.14E-02
8.14E-02
8.15E-02
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8.16E-02
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8.17E-02
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8.18E-02
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8.20E-02
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8.27E-02
8.28E-02
8.29E-02
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8.30E-02
8.30E-02
8.31E-02
8.34E-02
8.34E-02
8.35E-02
8.35E-02
8.36E-02
8.36E-02
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8.38E-02
8.38E-02
8.39E-02
8.39E-02
8.40E-02
8.41E-02
8.42E-02
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8.44E-02
8.44E-02
8.45E-02
8.45E-02
8.45E-02
8.46E-02
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8.47E-02
8.48E-02
8.51E-02
8.52E-02
8.52E-02
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8.56E-02
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8.62E-02
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8.77E-02
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8.77E-02
8.78E-02
8.78E-02
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8.79E-02
8.81E-02
8.82E-02
8.83E-02
8.83E-02
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8.88E-02
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8.89E-02
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4591
2930
55485
57977
13234
5670
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18500
64078
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36670
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3104
283459
23536
29088
60437
54963
85437
7737
90416
25888
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116337
23467
4851
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54726
25917
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132160
9501
162989
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57129
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55930
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79366
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65080
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66036
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10990
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339479
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81617
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5530
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51582
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81341
3897
55777
2885
54550
23008
63930
4724
55343
27107
132321
54891
6760
50853
284618
9889
ZBTB48
GATC
ADAT1
MRPL15
CDH26
UCKL1
ZCRB1
RNF113A
C15orf57
ZNF473
TCEAL2
CSNK1G3
PANX3
NPTXR
NOTCH1
BRD1
JUNB
HSPBP1
CDC27
C1orf170
CDHR2
C19orf12
PHYHIP
NXPH1
ELAVL3
PPP4R1
GOLIM4
RNF8
ERC1
CHAF1B
RAD52
SPAST
MTDH
PFN1
SAYSD1
GPC6
SLC39A14
CRTC2
BLZF1
EZR
PHF5A
PROSC
EIF5A2
ANKS6
C10orf54
SEMA5B
SFR1
OR9I1
EXOC1
SWSAP1
CENPT
WDYHV1
SLC7A1
SKP2
TMEM14B
IGSF8
CYHR1
RADIL
MRPS34
PPP2R4
RPN2
PLEKHA4
LDHC
PUSL1
KCTD6
UHMK1
KLRK1
SPG20
LOC554223
ATRN
ZNF92
KCNMB3
C2orf69
NCOA1
ABHD12
MYOZ1
HIST1H2BF
RRAGC
TAF6
MX1
CCNI
ZFP69B
MTCP1
CSTF1
PA2G4
PBDC1
KDM2B
TRPV1
LOC153684
OTUD4
THUMPD3
GOLGA4
MGAT5
PPM1M
RPH3AL
DEDD2
ZNF358
TTC13
C2CD2L
PIM2
MRPL47
HOXA1
TEDDM1
GDPD1
MAN2C1
FAM173A
CYTH1
MYO5C
CS
HMGN5
ACTN2
MRPL44
TNS1
LGALS2
IMMT
ARMC8
GSC
MTMR9
GADD45B
LILRB5
PPP1R35
FAM5C
RGMB
EXO5
AKAP4
CAB39L
FBXW8
ERCC3
DLD
NFASC
PPP3CA
MTG1
AZIN1
TMEM260
OR10W1
L1CAM
MBD5
GRB2
NECAB2
KLHDC10
RP11-305P22.9
NDUFS4
SLC35C1
ZBTB11
C4orf33
INO80D
SS18
VILL
C1orf104
ZBED4
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7257
7257
7257
7257
7257
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7257
7257
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6376
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7257
7257
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6376
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6376
7257
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1.701
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1.699
1.699
1.698
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1.696
1.695
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1.694
1.694
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1.694
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1.693
1.693
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1.692
1.692
1.692
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1.691
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1.69
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1.69
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1.689
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1.687
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1.685
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1.684
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1.672
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1.67
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1.669
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8.90E-02
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8.95E-02
8.95E-02
8.96E-02
8.97E-02
8.98E-02
8.99E-02
9.01E-02
9.02E-02
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9.07E-02
9.09E-02
9.09E-02
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9.11E-02
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9.12E-02
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9.14E-02
9.15E-02
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9.16E-02
9.17E-02
9.19E-02
9.20E-02
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9.25E-02
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9.26E-02
9.27E-02
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9.28E-02
9.29E-02
9.30E-02
9.30E-02
9.33E-02
9.34E-02
9.34E-02
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9.34E-02
9.35E-02
9.37E-02
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9.38E-02
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9.40E-02
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9.44E-02
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9.48E-02
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9.49E-02
9.51E-02
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9.52E-02
9.53E-02
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9.56E-02
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9.58E-02
9.60E-02
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9.69E-02
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9.71E-02
9.72E-02
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1.00E-01
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17228
5738
35862
60407
54479
68422
20510
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32596
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20152
42679
53184
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541565
147968
64769
51752
92344
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115098
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5435
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55929
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146512
22864
128866
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57798
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285754
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CAPN12
MEAF6
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GORAB
SLC35E1
CCDC124
EPC1
POLR2F
GLYR1
PRTFDC1
SPRYD7
ZCCHC9
REXO2
PPP2R1B
CXCL6
SPC25
IFRD1
LRRC6
TSPAN4
LRPAP1
RPL36AL
MTFR1
TAS2R41
SLX4
PKD2
TMCC1
ZNF740
FAM160B1
CEP85
TLR3
CNPY2
ZCWPW1
GJC2
ZNF580
KIAA1967
INSIG1
UBE2K
DIS3L2
SDC1
COG5
PTRHD1
HDLBP
NRXN2
TMEM199
IQGAP3
PGAM5
SRRD
NCKAP5L
RAB2B
RNF122
GNL1
RNF44
DHX33
SAMD9
TNIP2
CENPQ
CYP26A1
CRIPAK
ERV3-1
METTL15
USP30
ITPKA
NTRK1
MAP1LC3A
CDKL3
TACO1
EMC9
G6PC
FAM78A
ABCA5
ZNF707
GFPT1
PRSS33
SMG6
VPS4B
HIVEP3
C12orf52
OR4C3
STK36
TMEM192
GPRIN3
ZMYM6
TOLLIP
EXO1
TRAPPC10
ABCD1
PAGE2
APOPT1
APTX
HOXD12
PIK3CA
CASC3
OR2B3
COL14A1
SUGP1
C5orf45
UNG
LRRC25
MCPH1
BLOC1S2
SLC25A12
ADAMTS4
EFHC1
MOB3A
PCDH12
FADS6
CLEC11A
C21orf33
PPP2R5D
LBR
KNDC1
AUP1
IL21R
TXN2
PSMD12
VIMP
FILIP1
SNRPC
DUSP8
HLA-DRB5
RAD9A
STAT5B
GJD3
ATXN7L2
BSG
PTS
EIF4G2
TSPAN14
CCDC23
TAF1C
ARHGDIA
CPN2
SERPINH1
THBD
FAM65C
ANKRD6
OTOGL
DMAP1
PRKY
CEP19
FLJ30679
R3HDM2
CHMP4B
LYST
ING4
TIMM10
GATAD1
ARL2BP
FLJ37396
--+------------+
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CHMP6
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UROS
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ABCG4
PHOSPHO1
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KCTD17
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1.29E-01
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1.30E-01
1.30E-01
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1.30E-01
1.31E-01
1.31E-01
1.31E-01
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1.31E-01
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1.31E-01
1.31E-01
1.32E-01
1.32E-01
1.32E-01
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1.32E-01
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1.32E-01
1.32E-01
1.33E-01
1.33E-01
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1.33E-01
1.33E-01
1.33E-01
1.34E-01
1.34E-01
1.34E-01
1.34E-01
1.34E-01
1.34E-01
1.34E-01
1.35E-01
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1.35E-01
1.35E-01
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1.35E-01
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1.35E-01
1.36E-01
1.36E-01
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1.36E-01
1.36E-01
1.36E-01
1.36E-01
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1.37E-01
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10849
10473
64847
54503
57448
56971
57533
9821
8727
6307
196441
375484
8622
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4939
10945
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515
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57630
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4803
92086
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51507
148254
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10025
51207
387837
10403
1778
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HMGN4
SPATA20
ZDHHC13
BIRC6
CEACAM19
TBC1D14
RB1CC1
CTNNAL1
MSMO1
ZFC3H1
SIMC1
PDE8B
CRB3
OAS2
KDELR1
CD55
FHL3
MCOLN3
PSMB4
SLC22A2
WDR83
GRAP2
GDPD4
ATG16L1
C9orf130
ZBTB20
RCHY1
RBM8A
CEP55
IMPA1
LIPF
SEC11A
NR1H2
IDNK
AIF1
CCDC140
ATP5F1
PIGS
TMEM108
CYP51A1
ZNF335
ST6GALNAC4
RARG
ZNF558
EPN2
CENPO
PDP1
CNNM3
PDE4B
PROSER2
PWWP2B
CXCL10
TIFA
YWHAZ
HNRNPL
KRT18P55
BARD1
CDRT4
EXOSC4
TSC22D1
SVIL
KXD1
CUEDC1
FTSJ2
ZBTB18
UBALD2
GPR19
C1orf56
CD24
TRAPPC6B
ACAN
MEX3D
SNX10
NBEAL1
ZFPL1
THG1L
ANKRD7
WNT2
CDCA7
C21orf67
EYA3
CPSF3L
C15orf40
REPS1
SAMM50
XRCC5
C3orf75
F2RL1
CSNK1A1L
CSTF2
GSG1L
EXOSC1
HLA-DQB1
GGH
ZNF384
ACRC
DPH7
RFC5
SLC25A44
TUBB4A
KCND3
CORO7
DCST1
ARHGAP9
CLPX
SSH2
ABI1
ANKRD49
PIK3CB
SCYL3
HS3ST1
ZNF446
PHF20L1
MID2
FLJ42957
PKP4
LSAMP
GPR34
HBQ1
ZNF324B
ARAP2
CBLB
CEBPE
ZNF703
NRSN2
ECD
MYEF2
IGSF9B
AX747702
RIN1
CMAS
CLDN15
C1orf210
STOX1
SH3RF1
MSL3
LECT1
NGF
GGTLC1
HIST1H1A
BRI3BP
RTFDC1
ZNF555
PTGS2
MED16
DUSP13
CLEC12B
NDC80
DYNC1H1
++++-+
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7257
7257
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7257
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6376
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1.472
1.471
1.471
1.47
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1.469
1.469
-1.468
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1.468
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1.467
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1.467
1.466
1.466
1.466
1.465
1.465
1.465
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1.464
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1.463
1.463
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1.462
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1.46
1.459
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1.459
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1.458
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1.457
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1.457
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1.456
1.456
1.455
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1.454
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1.454
1.453
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1.45
1.449
1.449
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1.448
1.447
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1.447
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1.447
1.445
1.445
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1.445
1.444
1.444
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1.443
1.443
1.442
1.442
1.442
1.441
1.44
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1.44
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1.438
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1.437
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1.437
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1.436
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1.433
1.433
1.432
1.432
1.432
1.432
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1.431
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1.431
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1.43
1.43
1.429
1.429
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1.429
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1.428
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1.427
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1.427
1.426
1.426
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1.424
1.424
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1.424
1.423
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1.423
1.422
1.421
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1.41E-01
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1.46E-01
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1.47E-01
1.47E-01
1.47E-01
1.47E-01
1.47E-01
1.47E-01
1.47E-01
1.47E-01
1.48E-01
1.48E-01
1.48E-01
1.48E-01
1.48E-01
1.48E-01
1.48E-01
1.48E-01
1.49E-01
1.49E-01
1.49E-01
1.49E-01
1.49E-01
1.49E-01
1.49E-01
1.49E-01
1.49E-01
1.49E-01
1.49E-01
1.50E-01
1.50E-01
1.50E-01
1.50E-01
1.50E-01
1.50E-01
1.50E-01
1.50E-01
1.51E-01
1.51E-01
1.51E-01
1.51E-01
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1.51E-01
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1.52E-01
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1.52E-01
1.52E-01
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1.52E-01
1.52E-01
1.52E-01
1.52E-01
1.52E-01
1.52E-01
1.53E-01
1.53E-01
1.53E-01
1.53E-01
1.53E-01
1.53E-01
1.53E-01
1.53E-01
1.53E-01
1.53E-01
1.53E-01
1.53E-01
1.54E-01
1.54E-01
1.54E-01
1.54E-01
1.54E-01
1.54E-01
1.54E-01
1.54E-01
1.54E-01
1.54E-01
1.55E-01
1.55E-01
1.55E-01
1.55E-01
1.55E-01
1.55E-01
1.55E-01
1.55E-01
1.55E-01
1.55E-01
1.55E-01
1.55E-01
1.56E-01
1.56E-01
1.56E-01
1.56E-01
1.56E-01
1.56E-01
1.56E-01
31872
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25728
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79068
5879
7062
84109
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340348
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5701
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816
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1500
6926
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55095
55290
56259
55628
5704
23554
7353
55504
55670
57326
29781
253980
5297
LAPTM5
UGGT2
FTO
RAC1
TCHH
QRFPR
CNTLN
FLJ32955
TSPAN33
BTG3
PSMC2
KRBA1
TOP3B
RAB38
MLST8
TMEM176B
NUP62CL
NMNAT3
PDE6G
DOCK8
KLHL29
NDUFB6
RNF141
DNM1P46
BIN3-IT1
EP300
BAALC
CBX3
KCND1
KIAA0040
HCAR2
SEMA6D
SLC25A34
FNDC4
ZNF77
KCNE1L
BRMS1
ITGA10
ZNF23
EEF1A1
PRDM10
OR56B1
ZWINT
LRCH4
A1BG
SCML2
NFU1
SLC25A1
MAN2A2
ZNF219
EIF3I
TUBG2
SERPINB7
AP3B1
LINC00652
ZNF7
HYDIN
WBSCR16
TTLL11
FUT10
NAP1L3
FAM115A
NLRP8
BICD2
KBTBD8
PON2
LYAR
SCGN
CLDN19
ADRBK2
TACR2
BCL7B
ACAP2
MED9
KIAA1715
NELFA
CPA3
VHL
TRIM54
PPIP5K1
SLCO4A1
ADRA1B
CBX4
GSKIP
CCNG2
FBXO7
NECAP1
GUCA2A
ZAP70
PPAP2B
LSP1
FBXO42
PTPN2
CLECL1
ZNF225
C9orf16
KIAA1598
C11orf73
MYH9
SLC25A35
DDX39B
MAP2K7
HIPK1
SOSTDC1
FABP2
NUDT13
RSRC1
C3orf38
KCNK17
SNRPA
OR2B2
VPS41
SCAF11
DCTN6
CAMK2B
TSPAN31
GAD2
ZBTB40
PIGC
C14orf105
PRADC1
DAPK3
EGR1
TMEM161B
FAM19A2
MAFA
LRRC23
TMEM175
FLJ46836
PARVG
PFDN1
ARID3B
TRIM45
MSH3
CTNND1
TBX3
LINC00116
SAMD4B
BRF2
CTNNBL1
ZNF407
PSMC4
TSPAN12
UFD1L
TNFRSF19
PEX26
PBXIP1
NCAPH2
KCTD13
PI4KA
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7257
7257
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1.418
1.418
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1.417
1.416
1.416
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1.414
1.414
1.414
1.414
1.414
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1.413
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1.41
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1.389
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1.388
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1.56E-01
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1.60E-01
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1.62E-01
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1.63E-01
1.63E-01
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1.63E-01
1.63E-01
1.64E-01
1.64E-01
1.64E-01
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1.69E-01
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1.70E-01
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1.71E-01
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55549
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19268
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6199
7531
6752
10561
55233
7369
5156
1112
64581
9833
55275
10291
8722
6468
81576
RNF39
ASF1B
CCDC150
CCNO
C3orf22
BEND4
DPYSL4
SECTM1
C15orf38
ZNF513
PTPN23
SOAT1
PSMD13
LRRC57
ZC3H11A
ADAMTS10
RHOT1
SDK2
AAAS
RALBP1
PCDHB14
MORN3
OTUB2
RGL4
CALM2
BAI1
C19orf55
LINC00656
SMC6
PDE6D
FKBP1A
TMEM70
WDR90
LSM3
ZNF276
SLC2A4RG
USP5
KCNH6
ZSCAN29
PLA2G12A
TAX1BP1
MRPS7
RPS6KA6
ACO2
ZNF286A
HK1
HEXIM2
KPNA4
ARL6IP1
SLC6A13
FBXO30
SUSD2
CLDN7
GLT8D1
CANT1
APEX2
NARFL
MRPS18A
SMG9
NRM
METTL14
BDKRB2
TINCR
ALDH1A1
FGD3
SYAP1
PLAU
METTL21A
BAIAP2
LMAN2L
GPR27
PRAF2
CYP4V2
MET
TBCEL
OR2W5
ITSN2
GABARAPL2
TMEM45A
CRIPT
ECHS1
PTOV1
MRPS5
CHD1
GNPTG
OSGIN2
ACAT1
FAM35A
UBXN7
FAM177A1
MYNN
ZKSCAN1
MICALL2
HUS1B
AGER
SMAD2
RASA4
MXI1
HTR4
SPATA7
CNOT6L
FAM219A
BDNF
CELA3B
ECT2
HMOX2
ZNF25
PHF7
PRIM2
BAZ1A
CCDC24
ARHGEF12
CCDC121
PSMB7
GPATCH1
LOC283487
SPSB2
CFDP1
FKTN
CNNM1
INO80
PIK3C3
HEPACAM2
C9orf142
PDK2
NDUFAF7
ANKRD32
CEND1
MRPL19
STK32B
SGPP2
PLSCR4
FAM126A
RPP25
PTPN5
RPS6KB2
YWHAE
SSTR2
IFI44
MOB1A
UMOD
PDGFRA
FOXN3
CLEC7A
MELK
VPS53
SF3A1
CTSF
FBXW4
CCDC130
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7257
7257
7257
6376
7257
7257
7257
6376
7257
7257
7257
7257
7257
6376
7257
7257
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7257
7257
7257
6376
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7257
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6376
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1.364
-1.363
1.363
1.363
1.363
1.362
1.362
1.361
1.36
1.36
1.36
1.359
1.359
1.358
-1.358
1.358
-1.357
-1.356
-1.356
1.355
1.355
-1.355
1.354
1.354
1.354
1.354
1.353
1.353
-1.353
1.353
-1.353
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1.351
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1.35
1.35
1.35
1.349
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1.349
1.349
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1.348
1.348
1.348
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1.347
1.347
-1.344
1.343
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1.342
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1.34
1.34
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1.34
1.34
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1.339
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1.338
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1.336
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1.336
1.335
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1.335
1.335
-1.335
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1.332
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1.331
1.331
-1.33
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1.33
-1.329
1.329
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1.328
1.327
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1.325
1.324
1.324
1.324
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1.323
1.323
1.323
1.323
1.322
1.321
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1.321
-1.32
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1.32
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-1.319
1.319
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1.318
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1.317
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1.316
1.316
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1.315
1.315
1.314
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1.73E-01
1.73E-01
1.73E-01
1.73E-01
1.73E-01
1.73E-01
1.73E-01
1.73E-01
1.74E-01
1.74E-01
1.74E-01
1.74E-01
1.74E-01
1.74E-01
1.75E-01
1.75E-01
1.75E-01
1.75E-01
1.75E-01
1.75E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.76E-01
1.77E-01
1.77E-01
1.77E-01
1.77E-01
1.77E-01
1.77E-01
1.77E-01
1.77E-01
1.77E-01
1.78E-01
1.78E-01
1.78E-01
1.78E-01
1.78E-01
1.78E-01
1.78E-01
1.78E-01
1.78E-01
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1.78E-01
1.78E-01
1.78E-01
1.79E-01
1.79E-01
1.80E-01
1.80E-01
1.80E-01
1.80E-01
1.80E-01
1.80E-01
1.80E-01
1.80E-01
1.80E-01
1.81E-01
1.81E-01
1.81E-01
1.81E-01
1.81E-01
1.81E-01
1.82E-01
1.82E-01
1.82E-01
1.82E-01
1.82E-01
1.82E-01
1.82E-01
1.82E-01
1.82E-01
1.82E-01
1.83E-01
1.83E-01
1.83E-01
1.83E-01
1.83E-01
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1.83E-01
1.84E-01
1.84E-01
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1.85E-01
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1.86E-01
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1.86E-01
1.87E-01
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1.87E-01
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1.87E-01
1.87E-01
1.87E-01
1.87E-01
1.87E-01
1.88E-01
1.88E-01
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1.88E-01
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1.89E-01
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1.89E-01
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1.90E-01
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1.90E-01
1.91E-01
14078
25599
779
2941
36236
52796
39271
34634
52087
19583
55080
60609
41013
42695
66037
18317
38376
3832
21592
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67614
23737
47161
42400
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50171
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63268
5239
26642
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48951
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67816
5211
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54253
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57621
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66191
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2631
1528
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31697
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18710
41717
47514
57333
790
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1220
27087
67406
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52561
26906
38852
23543
62408
29771
17839
15809
34780
40602
3684
13663
58211
60880
62545
45192
25622
4780
32462
11732
63259
41705
5728
37857
57964
37910
57365
16356
20483
26486
52440
57845
40019
45791
47859
54463
36355
28563
11992
30645
64403
6242
39314
54058
58630
19325
30308
26049
40809
15135
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6476
253635
151525
5635
126328
1007
51079
3067
3576
196743
23270
5087
1193
10672
9001
5886
89891
10809
83444
64963
22843
54828
2145
85456
63932
9399
55721
130617
201181
3029
24144
1641
51172
84231
378464
154810
55270
9236
79029
2678
140461
162979
286319
91355
10554
79581
126133
10781
9978
22809
10870
404672
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6622
11086
2588
64754
219873
10468
56904
353088
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56180
58493
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10181
22856
2230
219960
84324
80271
2868
22800
160140
112939
54868
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54850
60626
6257
71
84520
51768
140732
55751
23530
25819
54101
64927
64131
51649
4139
152015
84658
9980
26155
51605
351
22854
382
489
9883
134
4808
127602
51131
10190
79989
83463
4040
7100
11259
84964
23406
4649
26872
4090
83607
84848
7289
55236
56603
394263
374659
11020
10135
10226
6780
284241
84065
92922
1789
51125
10056
7711
2738
140710
64925
11164
267002
113235
11131
3777
51025
637
6239
8715
SI
GPATCH11
WDSUB1
PRPSAP1
NDUFA11
CDH9
NDUFA13
HDC
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PAOX
TSPYL4
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GNA13
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EZH1
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STOML1
IQCC
ZFAND2B
ZNF385C
HAGH
TFIP11
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NAGPA
TRAF7
MORN2
AMOTL1
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CCPG1
SPATA5L1
GGT1
ASB8
ZNF296
TUSC1
LRP5L
AGPAT1
SLC52A2
ALDH16A1
ZNF266
RBX1
ATF5
HCST
GTF2H5
SIPA1
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GALNS
SMYD3
OR10S1
FST
SH3GLB2
ZNF429
KRT9
ABHD12B
MOSPD1
INIP
KRTAP9-4
XPO5
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CHSY1
FDX1
OR10Q1
SARNP
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C11orf65
NACC1
TMEM104
CMC1
FBXL12
RIC8A
RXRB
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C14orf142
TM7SF3
SUN5
TMEM184C
NNT
CCRN4L
RIPK4
TTC23
XYLT1
MRPS23
MARK1
ROPN1B
EMR3
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NOC2L
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APP
NTNG1
ARF6
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POM121
ADORA1
NHLH2
DNAH14
PHF11
TXNDC9
TTC26
MXD3
LRP6
TLR5
FILIP1L
ALKBH6
COTL1
MYO9A
STEAP1
SMAD5
AMMECR1L
MIR503HG
TULP3
UBA6
CYP26B1
MUC21
HDDC3
IFT27
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PLIN3
STAU1
FLJ25715
TMEM222
CCDC102A
DNMT3B
GOLGA7
FARSB
ZNF155
GLI4
SOGA1
CCDC71
NUDT5
PGBD2
SLC46A1
CAPN11
KCNK3
PAM16
BID
RREB1
NOL4
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7257
7257
7257
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7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
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7257
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6376
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7257
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6376
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7257
7257
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1.308
1.308
1.308
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1.308
1.307
1.307
-1.307
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1.306
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1.305
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1.304
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1.303
1.302
1.302
-1.301
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1.301
1.301
1.3
1.3
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1.299
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1.299
1.299
1.299
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1.299
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1.298
1.298
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1.297
1.296
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1.296
1.296
1.296
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1.295
1.295
1.294
1.294
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1.293
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1.293
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1.289
1.289
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1.285
1.285
1.285
1.284
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1.283
1.281
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1.281
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1.28
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1.279
1.279
1.279
1.278
1.278
1.278
1.277
1.276
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1.276
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1.275
1.274
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1.274
1.273
1.273
1.273
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1.273
1.272
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1.27
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1.269
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1.269
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1.268
1.268
1.267
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1.266
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1.264
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1.264
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1.263
1.263
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1.261
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1.261
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1.91E-01
1.91E-01
1.91E-01
1.91E-01
1.91E-01
1.91E-01
1.91E-01
1.91E-01
1.91E-01
1.91E-01
1.91E-01
1.92E-01
1.92E-01
1.92E-01
1.92E-01
1.92E-01
1.92E-01
1.92E-01
1.93E-01
1.93E-01
1.93E-01
1.93E-01
1.93E-01
1.93E-01
1.93E-01
1.93E-01
1.93E-01
1.93E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.94E-01
1.95E-01
1.95E-01
1.95E-01
1.95E-01
1.95E-01
1.95E-01
1.95E-01
1.95E-01
1.95E-01
1.95E-01
1.95E-01
1.95E-01
1.96E-01
1.96E-01
1.96E-01
1.96E-01
1.96E-01
1.96E-01
1.96E-01
1.97E-01
1.97E-01
1.98E-01
1.98E-01
1.98E-01
1.98E-01
1.98E-01
1.98E-01
1.98E-01
1.98E-01
1.99E-01
1.99E-01
1.99E-01
1.99E-01
1.99E-01
1.99E-01
2.00E-01
2.00E-01
2.00E-01
2.00E-01
2.00E-01
2.00E-01
2.01E-01
2.01E-01
2.01E-01
2.01E-01
2.01E-01
2.01E-01
2.01E-01
2.01E-01
2.01E-01
2.02E-01
2.02E-01
2.02E-01
2.02E-01
2.02E-01
2.03E-01
2.03E-01
2.03E-01
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2.03E-01
2.03E-01
2.03E-01
2.03E-01
2.03E-01
2.03E-01
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2.04E-01
2.04E-01
2.04E-01
2.04E-01
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2.05E-01
2.05E-01
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2.05E-01
2.05E-01
2.05E-01
2.05E-01
2.06E-01
2.06E-01
2.06E-01
2.06E-01
2.06E-01
2.06E-01
2.06E-01
2.06E-01
2.07E-01
2.07E-01
2.07E-01
2.07E-01
2.07E-01
2.07E-01
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2.07E-01
2.07E-01
2.08E-01
2.08E-01
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2.09E-01
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31762
45023
22915
35000
15718
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38159
42977
9870
1412
3262
30740
30311
33219
40445
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83445
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84332
56658
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ZC3H12A
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NDUFA10
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WFDC10A
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KCTD5
CBFA2T3
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TBC1D5
MICAL2
YWHAG
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STXBP3
CEACAM21
SEPSECS
CCNL2
LCP2
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PSMD1
TMSB4X
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NFYA
ZC4H2
NDEL1
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TMEM116
DNAH5
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SNX14
SEPT7
PRNP
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RSC1A1
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KIAA1324
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ZNF771
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PCIF1
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ELYS
SPACA1
UBE2E1
SOX21
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DCLRE1A
TTR
HIAT1
EIF4H
KHDC1
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DDRGK1
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CNEP1R1
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ZNF667
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ZNHIT2
PSPH
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RFX4
LPIN2
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TMEM185B
HDAC8
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WDR24
RHEBL1
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ZNF57
HTR1E
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TOR3A
ZSCAN12
SCAMP4
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ANAPC10
ST3GAL3
ECHDC1
AQP1
SH2B3
DICER1
CLDN14
NPBWR2
IFIT5
CXCL3
GPKOW
DIABLO
GATAD2B
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IRF4
GPN1
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IPO9
UGGT1
SP1
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KHDRBS3
PLB1
SBF2
GCA
SHF
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FKBP7
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RSPO3
NFXL1
CATSPER2P1
CBX1
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IRAK4
CLK3
QTRTD1
SPICE1
HSF1
P2RX3
MAPK13
CCNF
MRPL40
ATMIN
FIZ1
ALG1
SACM1L
DOK4
EDN2
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2.75E-01
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2.78E-01
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2.86E-01
2.86E-01
2.86E-01
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2.87E-01
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49471
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162494
23760
256471
55205
23054
26232
140460
54920
6764
50484
8490
3786
1439
56478
51663
10148
2960
9583
78986
7528
210
22903
51330
2954
197021
8698
363
253128
51761
29093
284058
118460
26230
2762
79586
9731
347853
8344
64943
2002
201229
10280
9
79905
10101
403323
23236
79759
10978
79862
4811
6301
220001
3960
4664
57799
55588
4952
27299
26092
150
29927
79699
54531
2651
10220
114883
9827
23149
1844
30001
10666
115399
5648
9146
919
9572
1855
7328
535
9802
23180
54464
51315
10273
9900
10911
478
57648
200185
84232
29890
6007
11158
912
401261
29990
115426
9805
10947
100129828
57038
222643
23120
2059
4774
IRX6
KANK4
GLE1
GSTO2
COPS7A
GUSBP5
ARHGAP4
BNIP2
CHCHD2
NRD1
C18orf25
PLXNA3
CDPF1
CPT2
PLEKHA7
CINP
SKIV2L
EXOSC10
CERKL
NAP1L5
NSMCE2
GLYATL1
KCTD3
CRISP2
PLK1S1
DYNLL1
B4GALT1
C19orf35
ZFYVE27
ACTR1B
DHRS11
ADTRP
STX2
MYL4
PSMD6
GPX4
SLC25A16
UBB
SMNDC1
PRAMEF2
ST8SIA4
NPRL3
BPIFA3
UBE2CP4
RHBDL3
PITPNB
MFSD8
ZNF532
NCOA6
FBXO2
ASB7
DUS2L
ST5
RRM2B
RGS5
KCNQ3
CSF2RB
EIF4ENIF1
ZFR
EBI3
GTF2E1
ENTPD4
DUSP26
YY1
ALAD
BTBD3
TNFRSF12A
GSTZ1
LCTL
S1PR4
AQP6
LINC00612
ATP8A2
MRPL22
KANSL1
EXOSC6
TIAM2
GMDS
CHPF
CEP104
TBX10
HIST1H2BE
NT5DC2
ELK1
LYRM9
SIGMAR1
NAT1
TMC7
NUBP2
FLJ20444
PLCB1
ZNF668
CLP1
ZNF669
NID1
SARS
VWCE
LGALS4
NAB1
RAB40C
MED29
OCRL
ADAMDEC1
TOR1AIP1
ADRA2A
SEC61A1
ZYG11B
MIER2
GCNT2
GDF11
OSBPL9
RGP1
FCHO1
DUSP2
ERO1L
CD226
LRRC56
MASP1
HGS
CD247
NR1D1
DVL1
UBE2H
ATP6V0A1
DAZAP2
RFTN1
XRN1
KRCC1
STUB1
SV2A
UTS2
ATP1A3
KIAA1522
KRTCAP2
MAF1
RBM15B
RHD
RABL2B
CD1D
FLJ38717
PILRB
UHRF2
SCRN1
AP3M2
EXLM1
RARS2
UNC5CL
ATP10B
EPS8
NFIA
+-+-++
---?-+
---+++
-----+
---?-+
++++--+--++
+-+----++++
+++++--+-+++--++
----++
--++++
--++-+
--++-++---+
---+-+
--+--+
+--+-----++
+-+?+--++-+
++++-+
+--+-+++++--+--+-+?++
+---------+
----++
+--?++---++++++--+--+
-+-?++++--++-+++-+--+
-+--++
+-+-++
++-+++-+++++--++++-++
-+++++--++-----+
+----+
-++?-+
--++++
-+---+
--+?-+-++-+---++
+++--+-+++--+--+
+-+?---++-+-+--+
++-+++
-++--+
--+--+
---+++-+--+
--++++
---+-+
+-+--+
+++--+
-++-++
----+-++-++
---+++----+
---+-+
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-----+
---+++
--++++
+-++---++-+
---+-+
-+---+
-+-+-+++-++
--++++
---+-+
++-++++++-+
-+-+++
--++-+
+++--+
---?-+
--+--+
++-++-+-+-+
+-+--+
---+----+++
---+-+
+-+?++
--+--+
+++++-----+
---+-+
--++-+
+-+--+
+++--+
--++-+
--+-++
-+---+
-+-+-+
+-++-++-++-----+
++--++
++---+
+--+-+
+++-+---?-+++++-+++-+
+-++-+
++-+++-+?---+---++?-+
++-+-+-+------++
++++-+
++---+
++-?+-+-+-+
++--++--?-+
--++-+
++----+++++
+-++-+
---+-+
+---+++-+--+-+++
--++-+
++---+
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++++--
7257
6376
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
6376
7257
7257
7257
6376
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
6376
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
6376
7257
6376
7257
7257
7257
7257
7257
6376
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
0.99
-0.99
0.99
-0.99
-0.989
-0.989
-0.989
-0.989
0.988
0.988
-0.988
0.988
-0.987
0.987
-0.986
-0.986
0.986
-0.985
-0.985
-0.985
-0.984
-0.984
-0.983
0.983
-0.983
0.982
-0.982
0.982
-0.981
-0.981
-0.981
-0.981
0.98
0.981
-0.98
-0.98
-0.98
0.979
-0.978
0.978
0.978
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0.977
0.977
0.977
0.977
-0.976
0.975
-0.975
0.975
0.974
0.974
-0.974
0.973
0.973
0.973
0.973
-0.972
-0.972
-0.971
-0.97
0.97
0.97
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0.97
0.968
0.968
0.968
0.968
0.967
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0.967
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-0.964
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0.964
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0.963
0.962
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-0.961
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0.961
0.96
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0.96
0.96
0.96
0.959
0.959
0.958
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0.957
0.957
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0.956
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0.956
0.956
0.956
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0.955
0.955
0.954
0.954
0.954
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0.953
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0.953
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0.952
0.951
0.95
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0.949
0.949
0.949
-0.948
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0.948
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0.945
0.945
-0.944
0.943
0.943
0.943
-0.943
0.942
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0.942
0.942
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0.939
0.939
-0.938
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0.938
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+
+
+
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+
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+
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+
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3.22E-01
3.22E-01
3.22E-01
3.22E-01
3.23E-01
3.23E-01
3.23E-01
3.23E-01
3.23E-01
3.23E-01
3.23E-01
3.23E-01
3.24E-01
3.24E-01
3.24E-01
3.24E-01
3.24E-01
3.25E-01
3.25E-01
3.25E-01
3.25E-01
3.25E-01
3.26E-01
3.26E-01
3.26E-01
3.26E-01
3.26E-01
3.26E-01
3.26E-01
3.26E-01
3.27E-01
3.27E-01
3.27E-01
3.27E-01
3.27E-01
3.27E-01
3.27E-01
3.28E-01
3.28E-01
3.28E-01
3.28E-01
3.28E-01
3.28E-01
3.29E-01
3.29E-01
3.29E-01
3.29E-01
3.30E-01
3.30E-01
3.30E-01
3.30E-01
3.30E-01
3.30E-01
3.30E-01
3.31E-01
3.31E-01
3.31E-01
3.31E-01
3.31E-01
3.31E-01
3.32E-01
3.32E-01
3.32E-01
3.32E-01
3.32E-01
3.32E-01
3.33E-01
3.33E-01
3.33E-01
3.33E-01
3.34E-01
3.34E-01
3.34E-01
3.34E-01
3.34E-01
3.35E-01
3.35E-01
3.35E-01
3.36E-01
3.36E-01
3.36E-01
3.36E-01
3.36E-01
3.36E-01
3.36E-01
3.37E-01
3.37E-01
3.37E-01
3.37E-01
3.37E-01
3.37E-01
3.37E-01
3.37E-01
3.38E-01
3.38E-01
3.38E-01
3.38E-01
3.38E-01
3.39E-01
3.39E-01
3.39E-01
3.39E-01
3.39E-01
3.39E-01
3.39E-01
3.39E-01
3.39E-01
3.39E-01
3.40E-01
3.40E-01
3.40E-01
3.40E-01
3.40E-01
3.41E-01
3.41E-01
3.41E-01
3.41E-01
3.41E-01
3.42E-01
3.42E-01
3.42E-01
3.42E-01
3.43E-01
3.43E-01
3.43E-01
3.43E-01
3.43E-01
3.43E-01
3.43E-01
3.44E-01
3.44E-01
3.45E-01
3.45E-01
3.45E-01
3.46E-01
3.46E-01
3.46E-01
3.46E-01
3.46E-01
3.46E-01
3.46E-01
3.46E-01
3.47E-01
3.47E-01
3.48E-01
3.48E-01
3.48E-01
3.48E-01
3.48E-01
3.48E-01
40067
3206
29816
57519
31082
9955
48115
60827
52288
19642
19928
35234
61764
54638
53603
19090
27224
47732
67180
68143
23986
27894
20150
35986
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45837
17779
67607
21137
48568
37500
65827
12926
44551
36190
5116
24019
20971
45660
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33625
37378
209
36716
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34691
15243
65539
62965
48187
43397
2650
21181
55880
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34775
62638
36330
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44028
57340
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3913
62664
3443
65138
3275
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6781
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67272
6421
59233
26458
208
38331
28853
29763
33597
1110
26913
48456
60490
16120
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1077
24581
40036
2803
52638
67161
43400
14123
441
46957
7249
26337
68505
14712
49153
12424
28559
64561
25687
33
28234
5704
42064
37537
51579
24481
61666
19146
43781
51803
32681
46992
17230
5560
48621
57486
13108
31169
42296
14279
5325
6729
37141
33017
26397
4344
39540
52526
45981
9328
50454
41575
22004
9025
5764
6718
8040
47961
59147
35505
6588
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9747
54332
126306
6183
84330
9723
57506
25806
2101
55023
9584
2117
153129
5965
29106
29765
4192
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285955
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539
55027
375035
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3241
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9726
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55584
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57649
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55092
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5136
64760
10289
5257
171546
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10253
8612
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81688
11016
10940
4707
5522
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51528
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57146
64091
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22928
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51631
4815
283254
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23140
5987
9392
4194
253832
92126
64386
10755
100129828
4245
100129828
3749
155061
9701
FAM115A
GDAP1
JSRP1
MRPS12
ZNF414
SEMA3E
MAVS
VAX2
ESRRA
PHIP
RBM39
ETV3
SLC38A9
RECQL
SCG3
TMOD4
MDK
EXOC3
RNF126
MORF4L1
SCCPDH
CNEP1R1
KANK2
TBC1D23
LINC00521
AEN
ZNF41
ARL6IP4
XPNPEP3
UGP2
TOPBP1
OPTN
MPND
SAA1
HAGHL
LLPH
ULK2
GTF2E2
DPEP3
TMPRSS13
ZNRD1
HOXD13
SLC5A2
LRRN4CL
SPDYE1
HMGA2
PPARGC1B
SAP130
POC5
PRRT2
ABHD6
ATP5O
HEATR3
SFT2D2
FIS
TTC33
MRGPRF
KY
TRIM29
KLC1
NANS
BRD4
HPCAL1
NPLOC4
EVI2A
ZNF646
CAV1
P2RY6
PRKD3
XRCC2
ABCB6
AKIRIN1
RGS2
CHRNA9
TRIM47
CASP3
MRPL41
SUN2
SLC9A3
NAPG
MEP1A
FHL1
MLF2
LRCH3
ARHGAP18
FAM162A
LHPP
PHF12
POLM
LILRA2
TMEM51
SUMO2
PDE1A
FAM160B2
EIF1B
PHKB
SPTSSA
DEK
ZNF778
MVK
SPRY2
PPAP2C
DNAJC28
LPA
ACTR3
TNP1
C6orf62
ATF7
POP1
NDUFB1
PPP2R2C
ITGB7
JKAMP
FAM83H
PARL
PCNA
HSDL2
CHIC2
UQCR10
AHNAK2
TMEM159
POPDC2
LONP2
SEPHS2
ZBTB3
HADHA
NTN3
CIC
PIGM
VKORC1L1
STX3
CACUL1
C7orf55-LUC7L2
NINJ2
HARBI1
PCGF6
ZZEF1
TRIM27
TGFBRAP1
MDM4
ZDHHC20
DSEL
MMP25
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TAZ
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0.848
0.847
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0.846
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3.78E-01
3.78E-01
3.78E-01
3.78E-01
3.79E-01
3.79E-01
3.79E-01
3.79E-01
3.79E-01
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3.79E-01
3.80E-01
3.80E-01
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3.80E-01
3.80E-01
3.80E-01
3.81E-01
3.81E-01
3.81E-01
3.81E-01
3.81E-01
3.82E-01
3.82E-01
3.82E-01
3.82E-01
3.83E-01
3.83E-01
3.83E-01
3.83E-01
3.83E-01
3.83E-01
3.83E-01
3.83E-01
3.84E-01
3.84E-01
3.84E-01
3.84E-01
3.84E-01
3.85E-01
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3.85E-01
3.86E-01
3.86E-01
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3.86E-01
3.86E-01
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3.87E-01
3.87E-01
3.87E-01
3.88E-01
3.88E-01
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3.89E-01
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33727
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54755
2382
23316
57618
20437
28731
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65810
31325
64793
1726
20761
56906
383
34297
9715
37871
19138
28010
67061
1778
25367
15970
62214
24170
61665
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28504
53700
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30849
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131540
2160
4832
10518
1445
51020
3728
135154
51686
130872
2528
50640
283897
9350
5475
340596
121457
56917
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10420
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51754
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22977
54758
100129828
128822
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54520
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553158
389206
7260
55505
84305
57091
51166
5076
84449
55700
26579
88745
25989
284123
55791
83985
2035
1122
23198
51177
4116
9101
81892
6619
10894
200909
8106
4735
84775
10157
8704
108
120227
9201
123016
22879
1564
25886
64320
57396
3656
79169
152756
143279
284695
51400
246704
79184
51360
91875
27180
2622
79753
54976
4692
284439
203197
25992
84669
5592
9354
64407
1839
26010
80199
4342
85480
51027
22932
10717
4521
2621
23239
79774
140801
4942
145946
390077
9253
63920
54756
90693
56344
9063
2948
58515
6830
1950
387893
9812
8745
84988
375189
81790
5523
283219
54435
27341
100129828
64708
8928
55260
100129828
51160
26993
22920
84203
57051
ZDHHC19
F11
NME3
CIB2
CSK
HDDC2
JUP
C6orf57
OAZ3
AHSA2
FUT6
PNPLA8
C16orf54
CER1
PPEF1
LHFPL1
IKBIP
MEIS3
ORC1
AKT1S1
PTPLB
ILDR2
TRIO
SEC24A
DLST
SORD
ATP5B
SELENBP1
TESK2
RBM6
TMEM8B
C2orf88
DDOST
OR1L4
AKR7A3
KLHDC4
CASC2
CST9
F9
NMRAL1
CCDC93
RAB7A
ARHGAP8
BEND4
TSSC1
NOP10
WIBG
CASS4
AADAT
PAX2
ZNF333
MAP7D1
MYEOV
RRP36
ULK3
FAM27L
LRIF1
SPNS1
EPB41
CHML
PSME4
PLEKHO1
MAGOH
USP8
SLIRP
SNAPC3
LYVE1
HTR3D
PABPN1
SEPT2
ZNF607
AASS
B4GALT2
ADCY2
CYP2R1
DCLK1
TTC8
MON1B
CYP2D7P
POC1A
RNF25
CLK4
IRAK2
C1orf35
FAM218A
HECTD2
ZNF326
PPME1
LINC00315
BRCC3
MBTPS2
TTC5
SIGLEC9
GAS8
SNIP1
C20orf27
NDN
SLC25A42
C9orf91
SNED1
USP32
PRKG1
UBE4A
RGS18
HBEGF
SPATS2L
FUZ
MOS
TSLP
BOLA1
POMZP3
AP4B1
NUDT1
GAS6
PHLPP1
GRTP1
RPL10L
OAT
SPATA8
OR52N2
NUMBL
C5orf54
IL17RD
CCDC126
CABP5
PIAS2
GSTM4
SELK
SUPT6H
EGF
SETD8
KIAA0141
ADAM23
PPP1R16A
PFN4
RNF170
PPP2R3A
KCTD21
HCG4
RRP7A
FRMD6
COPS7B
FOXH1
TMEM143
PLA2G4E
VPS28
AKAP8L
KIFAP3
TXNDC2
NAG18
----++
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---+++
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7257
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
7257
7257
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7257
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7257
7257
7257
7257
7257
7257
6376
7257
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7257
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7257
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7257
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7257
7257
6376
7257
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7257
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7257
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7257
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7257
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7257
7257
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7257
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7257
7257
7257
7257
7257
7257
6376
7257
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7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
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7257
7257
7257
7257
7257
6376
7257
7257
6376
7257
7257
7257
7257
7257
7257
7257
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7257
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7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
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0.832
0.832
0.832
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0.83
0.829
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0.829
0.828
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0.828
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0.826
0.826
0.825
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0.825
0.824
0.824
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0.823
0.822
0.822
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0.821
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0.818
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0.817
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0.815
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0.814
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0.814
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0.812
0.811
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0.81
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0.807
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0.805
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0.805
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0.804
0.804
0.804
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0.803
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0.803
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0.801
0.8
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0.8
0.799
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0.798
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0.794
0.794
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0.793
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0.792
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0.792
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0.79
0.79
0.79
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0.787
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0.785
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0.785
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0.784
0.783
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+
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4.05E-01
4.05E-01
4.05E-01
4.05E-01
4.05E-01
4.05E-01
4.06E-01
4.06E-01
4.06E-01
4.06E-01
4.06E-01
4.07E-01
4.07E-01
4.07E-01
4.07E-01
4.07E-01
4.08E-01
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LYPD3
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BCAR3
FAP
SLC35B2
FAM212A
AHCYL2
LMBRD1
PTPRS
TMEM33
SELL
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C11orf24
VTI1B
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STRADA
PRKAB2
TJAP1
POMGNT1
MEF2C
CIDEC
PCED1A
APEH
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SNN
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IGSF11
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KIAA0247
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DHX58
STRIP1
DCUN1D2
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OR2AG1
HNRNPH2
HIC1
IPO13
C17orf64
ANKHD1
DMC1
GEN1
PRKCI
SLC27A2
ZNF442
DKK1
MC1R
EPB41L5
C3orf18
CHMP4A
FUCA1
ASIC3
SMURF2
NPY5R
IFT122
TRIM32
NDUFAF5
DNAJB14
DDX19B
TACR1
C7orf55
E2F3
BRK1
YIF1A
SRP14
TNK2
CSNK1A1
SAP30BP
ZNF250
VEZF1
GPATCH2
SERPINI1
C12orf50
NUDT2
LPAR2
GINS4
SERPINA10
PECAM1
SLC25A39
GNA14
EPHA6
TMEM256
DGCR2
CDCA4
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EXTL2
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PROK2
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FAH
NAV2
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ZNF148
MRPS14
DDIT3
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SUV39H1
MDP1
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PEX19
RABGEF1
NUP93
C4orf3
CHMP1B
SHARPIN
HBZ
OR1J2
TUFM
TMEM17
CEBPA-AS1
AMPD3
GDI2
MAGT1
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TMEM35
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TSC22D2
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C12orf76
WNT16
C1QTNF1
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RNF152
SDHB
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CHST10
CCT5
VAMP2
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NT5M
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TRIM33
MRPL54
PCDH11X
GNPAT
RANGRF
MEIS3P1
FAM118B
C19orf33
FOXK2
POLR1D
CLPTM1L
ATP5S
TGM3
COPRS
NANOGP1
FAM20B
FAM193A
BTN2A2
SPIN1
PTER
ACOX3
YPEL5
SERTM1
ZNF526
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PPP1R18
NIPSNAP3A
IFT52
TPGS1
DCAF13
KIAA0753
GALNT9
GOSR2
VPS13C
COG4
ZNF28
CHRAC1
PCCB
DOK7
GBX2
CAMK2G
VPS8
CRYGB
HOXA5
MTG2
TNFRSF9
MIR4697
CHCHD3
HEATR6
SNHG11
CNDP2
TEX261
MIF4GD
FAM206A
ACSS1
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5.36E-01
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5.37E-01
5.38E-01
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5.38E-01
5.39E-01
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5.39E-01
5.40E-01
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5.41E-01
5.41E-01
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5.42E-01
5.42E-01
5.42E-01
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5.42E-01
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5.43E-01
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48968
10219
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8629
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54903
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113829
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AMER2
DPM2
COASY
PES1
GUK1
LANCL2
STK11
MTA2
NCOA4
ZFAT
SH2B2
TXNDC15
HGSNAT
NAPA
PRRT3
APPL1
MCTS1
ALPP
MYL2
PLA2G2D
HIST1H2AC
SEC31B
ZNF169
TIMELESS
DAG1
ZNF8
CBR1
ABCC2
CDC42BPB
LCE1B
IFNGR1
C14orf93
PRC1
PNMA1
ZNF107
NHS
FAM163A
TCF25
PPM1D
IRS4
PBLD
TMEM145
PCSK7
C17orf47
C1GALT1
LRMP
KCNG2
SNAP25
DHRS4
BMP6
NLRP7
SEC22C
CDIPT
OR52B6
RARB
SRD5A3
FAM26D
MRPL11
MROH8
RFK
MAP2K1
NAPSA
DNAJC7
SLC28A1
COMMD3
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DESI2
PPM1F
RPP25L
ROR1
COBL
ABCC1
ERP44
DDX43
PARD6A
RHOT2
PKNOX1
BCL2L11
MMP2
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C11orf82
SIGLEC12
ARAF
HSPB11
SGK494
CYC1
FOXN3
USP33
MED13
DPH1
PRR11
SLC39A9
TPM3P9
GNAT1
CCDC144NL
PTPRR
AKNA
SYN1
RPS21
MGC71805
MSI1
RNF19B
ERVFRD-1
ABCG5
AJAP1
DDIT4
KIAA0226L
ATP6V1H
SLC38A5
CAT
CPXM2
RNF220
KDM5C
PVRL3
ADAMTS19
FAM131A
AMICA1
NDUFA1
MSL3
PAPOLG
ADAMTS6
GMEB2
CYTH1
BAZ2B
HERPUD1
TTC23L
FOXC2
AOC2
EEF2K
CCDC112
CYP2S1
MMAA
CNGB1
CAMSAP1
PPM1H
MEF2A
LXN
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POLR2J
VAMP4
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ACKR2
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JRK
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CCNL1
MKS1
PSPC1
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6.94E-01
6.94E-01
6.94E-01
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64559
12482
611
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54612
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62370
1629
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19734
2588
9780
11086
18486
21708
42995
50228
67419
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53635
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79020
3630
57585
722
114823
440275
253714
8266
257236
4849
5683
3792
5025
9187
2125
5306
8824
9122
6521
79086
84284
5520
81542
5303
9020
144360
9857
10140
283377
79751
151246
23383
4124
9110
79576
3141
2888
80255
55911
3561
10588
60492
8402
25865
157848
8636
83475
5203
5015
5573
667
79658
255783
4292
10742
122809
80781
503542
162427
23423
100129828
1519
23389
5972
2589
23258
53407
140432
9477
8854
256949
23189
140459
8045
7932
6400
4137
661
3887
11257
115353
7739
5204
51251
144108
63893
256236
2241
56905
22938
79002
56987
3467
2864
5738
55837
7403
55811
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51517
64787
116254
55220
84272
29980
64478
8563
79767
55069
55238
445582
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9092
143888
6603
23590
10084
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6518
3489
2631
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55707
6455
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201305
56681
29934
4756
51234
143684
266971
983
29954
58506
83606
466
5867
1657
51706
3290
83648
221785
54958
9831
133383
163154
C7orf25
INS
CRAMP1L
C4BPA
LENG8
EIF2AK4
MMS22L
UBL4A
CCDC96
CNOT3
PSMA2
KEL
P2RX4
SLC24A1
EVPL
PITPNA
CES2
SLC16A4
SLC4A1
SMIM7
NTPCR
PPP2R2A
TMX1
PIN4
MAP3K14
LINC00477
CEP350
TOB1
SPRYD4
SLC25A22
SGOL2
MAU2
MAN2A1
MTMR4
NKAP
HLCS
GRB14
SLC35F5
APOBR
IL2RG
MTHFS
CCDC90B
SLC25A11
PRKD2
NKX6-3
SSNA1
DOHH
PFDN4
OTX2
PRKAR1A
DST
ARHGAP10
PRR24
MLH1
RAI2
SOCS4
COL18A1
SPRN
FAM134C
TMED3
NCRNA00115
CTSO
MED13L
REN
GALNT1
DENND5A
STX18
RNF113B
MED20
ALDH1A2
KANK3
KANK1
ASB6
RASSF7
OR2H2
SEL1L
MAPT
POLR3D
KRT81
TP53TG1
LRRC42
ZNF185
PFDN5
NT5C3A
SPTY2D1
UBE2O
NAPSB
FER
C15orf39
SNW1
C19orf43
BBX
IFNW1
FFAR1
PTGFRN
EAPP
KDM6A
ADCY10
ARHGEF2
NCKIPSD
EPS8L2
GINM1
KLHDC8A
YIPF4
DONSON
CSMD1
THOC5
ELMO3
TMEM248
SLC38A7
POTEE
SGSH
SART1
KDELC2
SMARCD2
PDSS1
PQBP1
FAM188B
DSCR10
SLC2A5
IGFBP6
GBAS
RELL2
PANK3
NXF2
NECAP2
SH3GL1
DNAJC16
SPNS3
SAR1A
SNX12
NEO1
EMC4
FAM76B
PIPSL
CDK1
POMT2
SCAF1
GUCD1
ATF1
RAB4A
DMXL1
CYB5R1
HSD11B1
FAM167A
ZSCAN25
TMEM160
ZNF623
SETD9
PRR22
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7257
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7257
7257
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7257
7257
7257
7257
7257
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6376
7257
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7257
7257
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7257
7257
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7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
6376
7257
7257
7257
7257
7257
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7257
7257
7257
7257
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7257
7257
7257
7257
7257
7257
7257
7257
7257
7257
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7257
7257
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7257
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0.393
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0.392
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0.388
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0.385
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0.384
0.384
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0.384
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0.383
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0.379
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0.367
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0.362
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0.36
0.36
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0.358
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0.355
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0.35
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6.95E-01
6.95E-01
6.95E-01
6.96E-01
6.97E-01
6.98E-01
6.99E-01
6.99E-01
7.00E-01
7.00E-01
7.01E-01
7.01E-01
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7.02E-01
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7.03E-01
7.03E-01
7.03E-01
7.04E-01
7.05E-01
7.05E-01
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7.06E-01
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7.08E-01
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7.11E-01
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7.12E-01
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7.13E-01
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7.13E-01
7.14E-01
7.14E-01
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7.14E-01
7.15E-01
7.15E-01
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7.15E-01
7.15E-01
7.16E-01
7.16E-01
7.16E-01
7.16E-01
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7.17E-01
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7.18E-01
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7.19E-01
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7.21E-01
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7.22E-01
7.23E-01
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7.24E-01
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7.25E-01
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7.25E-01
7.26E-01
7.27E-01
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7.28E-01
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7.29E-01
7.29E-01
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7.30E-01
7.30E-01
7.30E-01
7.30E-01
7.31E-01
7.32E-01
7.32E-01
7.32E-01
7.32E-01
7.32E-01
7.32E-01
7.32E-01
7.33E-01
7.33E-01
7.33E-01
7.33E-01
7.34E-01
7.34E-01
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7.35E-01
7.35E-01
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7.35E-01
7.35E-01
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29907
27368
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84657
5184
4204
5828
83897
7265
957
563
132320
130
6047
55295
51086
9028
84080
83737
2674
27341
123355
80127
81832
81603
6421
79096
549
3709
80185
166336
3633
595
83659
57571
440465
54993
6347
6695
10587
9633
200539
57619
7766
79714
7349
150274
100129828
2022
57093
147015
3818
84168
28978
10733
83544
5998
8911
79033
63877
54206
10713
10794
23759
543