Zebrafish Behavioral Profiling Links Drugs to Biological Targets and
Transcription
Zebrafish Behavioral Profiling Links Drugs to Biological Targets and
REPORTS formatics, Indiana University, Bloomington, IN 47405, USA. Department of Computer Science, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA. 47Department of Structural Biology and Bioinformatics, University of Geneva Medical School, CH-1211 Geneva, Switzerland. 48Research School of Biology, Australian National University, Canberra, Australian Capital Territory 2601, Australia. 49Roy J. Carver Center for Comparative Genomics and Department of Biology, University of Iowa, Iowa City, IA 52242, USA. 50Department of Genetics and Biochemistry, Clemson University, Clemson, SC 29634, USA. 51Institute of General Zoology, University of Jena, D-7743 Jena, Germany. 52Faculdade de Medicina de Ribeirão Preto, Departamento de Genética, Universidade de São Paulo, Ribeirão Preto, São Paolo 14049-900, Brazil. 53Department of Entomology, Commonwealth Scientific and Industrial Research Organisation, Canberra, Australian Capital Territory 2601, Australia. 54Institute of Evolutionary Biology–School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3JT, UK. 55 Vector Group, Liverpool School of Tropical Medicine, Liverpool L3 5QA, UK. 56Department of Molecular, Cell, and Developmental Biology, University of California, Santa Cruz, Santa Cruz, CA 95064, USA. 57Reese Consulting, 157/10 Tambon Ban Deau, Amphur Muang, Nong Khai, 43000, Thailand. 58Department of Biology, Western Washington University, Bellingham, WA 98225, USA. 59Department of Biological Sciences, University of Notre Dame, Notre Dame, IN 46556, USA. 60Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA. 61School of Marine and Tropical Biology and Centre for Comparative Genomics, James Cook University, Townsville, Queensland 4811, Australia. 62Department of Evolutionary Biology and Animal Ecology, University of Freiburg, 79104 Freiburg, Germany. 63School of Biology, University of St Andrews, St Andrews KY16 9TH, UK. 64Department of Computer Science, Royal Holloway, University of London, 46 Zebrafish Behavioral Profiling Links Drugs to Biological Targets and Rest/Wake Regulation Jason Rihel,1*† David A. Prober,1*‡ Anthony Arvanites,2 Kelvin Lam,2 Steven Zimmerman,1 Sumin Jang,1 Stephen J. Haggarty,3,4,5 David Kokel,6 Lee L. Rubin,2 Randall T. Peterson,3,6,7 Alexander F. Schier1,2,3,8,9† A major obstacle for the discovery of psychoactive drugs is the inability to predict how small molecules will alter complex behaviors. We report the development and application of a high-throughput, quantitative screen for drugs that alter the behavior of larval zebrafish. We found that the multidimensional nature of observed phenotypes enabled the hierarchical clustering of molecules according to shared behaviors. Behavioral profiling revealed conserved functions of psychotropic molecules and predicted the mechanisms of action of poorly characterized compounds. In addition, behavioral profiling implicated new factors such as ether-a-go-go–related gene (ERG) potassium channels and immunomodulators in the control of rest and locomotor activity. These results demonstrate the power of high-throughput behavioral profiling in zebrafish to discover and characterize psychotropic drugs and to dissect the pharmacology of complex behaviors. M ost current drug discovery efforts focus on simple in vitro screening assays. Although such screens can be successful, they cannot recreate the complex network interactions of whole organisms. These limitations are particularly acute for psychotropic drugs because brain activity cannot be modeled in vitro (1–3). Motivated by recent small-molecule screens that probed zebrafish developmental processes (4–7), we developed a whole organism, highthroughput screen for small molecules that alter larval zebrafish locomotor behavior. We used an 348 automated rest/wake behavioral assay (3, 8) to monitor the activity of larvae exposed to small molecules at 10 to 30 mM for 3 days (Fig. 1A) (3). Multiple behavioral parameters were measured, including the number and duration of rest bouts, rest latency, and waking activity (i.e., activity not including time spent at rest) (Fig. 1B) (3). We screened 5648 compounds representing 3968 unique structures and 1680 duplicates and recorded more than 60,000 behavioral profiles. Of these, 547 compounds representing 463 unique structures significantly altered behavior relative 15 JANUARY 2010 VOL 327 SCIENCE Egham, Surrey TW20 0EX, UK. 65Institut für Mikrobiologie und Genetik, Universität Göttingen, 37077 Göttingen, Germany. 66 Division of Insect Sciences, National Institute of Agrobiological Science, Tsukuba, Ibaraki 305-8634, Japan. 67Department of Biology and Biocenter Oulu, University of Oulu, 90014 Oulu, Finland. 68Department of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA. 69 Department of Cellular Biology, University of Georgia, Athens, GA 30602, USA. 70Department of Biotechnology, Chemistry, and Food Science, Norwegian University of Life Sciences, N-1432 Ås, Norway. *These authors contributed equally to this work. †To whom correspondence should be addressed. E-mail: werr@mail.rochester.edu (J.H.W.); stephenr@bcm.tmc.edu (S.R.) ‡Current address: Verhaltensbiologie, Universität Osnabrück, 49076 Osnabrück, Germany. §Current address: Departament de Genètica i de Microbiologia, Universitat Autònoma de Barcelona, 8193 Bellaterra, Spain. ||Current address: Weill Cornell Medical College, New York, NY 10065, USA. ¶Current address: Department of Epidemiology, University of Texas, M.D. Anderson Cancer Center, Houston, TX 77030, USA. Supporting Online Material www.sciencemag.org/cgi/content/full/327/5963/343/DC1 Materials and Methods SOM Text Figs. S1 to S25 Tables S1 to S57 References 22 June 2009; accepted 24 November 2009 10.1126/science.1178028 to controls, according to a stringent statistical cutoff (3). Because the alterations in behavior were multidimensional and quantitative, we assigned a behavioral fingerprint to each compound and applied clustering algorithms to organize molecules according to their fingerprints (Fig. 2A and figs. S1 to S3). This analysis organized the data set broadly into arousing and sedating compounds and identified multiple clusters corresponding to specific phenotypes (Fig. 2, B to F; Fig. 3, A to C; Fig. 4, B and C; and figs. S1 to S4). Clustering allowed us to address three questions: (i) Do structural, functional, and behavioral profiles overlap? (ii) Does the data set predict links between known and unknown small molecules and their mechanisms of action? (iii) Does the data set identify unexpected 1 Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA. 2Harvard Stem Cell Institute, Harvard University, Cambridge, MA 02138, USA. 3Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA. 4Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA. 5Center for Human Genetic Research, Massachusetts General Hospital, Boston, MA 02114, USA. 6Developmental Biology Laboratory, Cardiovascular Research Center, Massachusetts General Hospital, Charlestown, MA 02129, USA. 7 Department of Medicine, Harvard Medical School, Boston, MA 02115, USA. 8Division of Sleep Medicine, Harvard Medical School, Boston, MA 02215, USA. 9Center for Brain Science, Harvard University, Cambridge, MA 02138, USA. *These authors contributed equally to this work. †To whom correspondence should be addressed. E-mail: schier@fas.harvard.edu (A.F.S.); rihel@fas.harvard.edu (J.R.) ‡Present address: Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA. www.sciencemag.org Downloaded from http://science.sciencemag.org/ on May 11, 2016 Ciências e Letras de Ribeirão Preto, Departamento de Biologia, Universidade de São Paulo, Ribeirão Preto, São Paolo 14040-901, Brazil. 26Department of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA. 27Josephine Bay Paul Center for Comparative Molecular Biology and Evolution, Marine Biological Laboratory, Woods Hole, MA 02536, USA. 28European Molecular Biology Laboratory, 69117 Heidelberg, Germany. 29Institute for Evolution and Biodiversity, University of Münster, 48143 Münster, Germany. 30Laboratory of Zoophysiology, Ghent University, B-9000 Ghent, Belgium. 31 The Queensland Brain Institute, The University of Queensland, Brisbane, Queensland 4072, Australia. 32Department of Microbiology and the Center for Computational Biology, Montana State University, Bozeman, MT 59715, USA. 33Instituto de Física de São Carlos, Departamento de Física e Informática, Universidade de São Paulo, São Carlos, São Paolo 13560-970, Brazil. 34Subtropical Insects Research Unit, United States Department of Agriculture–Agricultural Research Service (USDAARS), U.S. Horticultural Research Lab, Fort Pierce, FL 34945, USA. 35School of Biological Sciences, University of Liverpool, Liverpool L69 7ZB, UK. 36School of Biology, Georgia Institute of Technology, Atlanta, GA 30332, USA. 37Department of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA. 38Bee Research Lab, USDA-ARS, Beltsville, MD, 20705, USA. 39Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland 4811, Australia. 40Department of Biology, Indiana University, Bloomington, IN 47405, USA. 41Institute of Physiology, Rheinisch-Westfaelische Technische Hochschule (RWTH) Aachen University, D-52074 Aachen, Germany. 42Department of Molecular Biology, Umeå University, S-901 87 Umeå, Sweden. 43 Department of Entomology, University of Nebraska, Lincoln, NE 68583, USA. 44Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan. 45School of In- candidate pathways that regulate rest/wake states? Cluster analysis revealed several lines of evidence that molecules with correlated behavioral phenotypes often shared annotated targets or therapeutic indications (Fig. 2, B to F, and figs. S1 to S4). First, drug pairs were more likely to be correlated if the compounds shared at least one annotated target (median correlation when sharing one target, 0.561 versus 0.297 when sharing zero targets; fig. S5, A and B). Second, analysis of 50 different structural and therapeutic classes revealed that drugs belonging to the same class produced highly correlated behaviors in nearly all cases (fig. S5C and fig. S6) (3). For example, several structurally diverse selective serotonin reuptake inhibitors (SSRIs) similarly reduced waking, and sodium channel agonist insecticides induced large increases in waking activity (fig. S5C and fig. S6). Third, behavioral profiling uncovered the polypharmacology of drugs with multiple targets. For example, the profile of the dopamine reuptake inhibitor and muscarinic acetylcholine receptor antagonist 3a-bis-(4-fluorophenyl) methoxytropane correlated only with drugs that also shared both properties, such as the anti-Parkinson’s drug trihexyphenidyl (fig. S7) (3). Fourth, modulators of the major neurotransmitter pathways often induced locomotor and rest/wake effects in zebrafish larvae similar to those seen in mammals (figs. S8 to S15) (3). For example, a2-adrenergic receptor agonists (e.g., clonidine) were sedating, whereas b-adrenergic agonists (e.g., clenbuterol) were arousing, as in mammals (fig. S8). These analyses indicate that compounds with shared biological targets yield similar and conserved phenotypes in our high-throughput behavioral profiling. Detailed analyses revealed that the clustering of well-known and poorly characterized drugs could predict targets for compounds whose mode of action has been unclear (Fig. 3). For example, Cl O O Cl Cl Cl Cl NH O N Cl A Cl Cl O Cl HO ing infection, a role for the immune system in normal vertebrate sleep/wake behavior has not been described (14). Behavioral profiling revealed that a diverse set of anti-inflammatory compounds increased waking activity during the day with much less effect at night (Fig. 4B and fig. S17). These anti-inflammatory compounds included the steroidal glucocorticoids, the nonsteroidal anti-inflammatory drugs (NSAIDs), phosphodiesterase (PDE) inhibitors, and other compounds with anti-inflammatory properties, including the immunosuppressant cyclosporine and the mood stabilizer valproic acid. Taken together, these data suggest that inflammatory signaling pathways not only induce sleep during infection (14) but also play a role in setting normal daytime activity levels. 4) Ether-a-go-go–related gene (ERG) potassium channel blockers selectively increased waking activity at night without affecting total rest (Fig. 4C and fig. S18). This phenotype was induced by compounds with divergent therapeutic indications (e.g., the antimalarial halofantrine, the antipsychotic haloperidol, the antihistamine terfenadine); however, these drugs also inhibit the ERG channel and can cause the heart rhythm disorder long QT syndrome (15, 16). Rank-sorting all the screened compounds by their fingerprints’ mean correlation to the ERG-blocking cluster resulted in a significant enrichment of known ERG blockers in the top ranks (Fig. 4D). Moreover, the specific ERG inhibitor dofetilide increased nighttime activity, whereas structurally related non-ERG blocking compounds, including the antihistamines fexofenadine and cetirizine, did not (fig. S18B). Finally, this phenotype was not caused by general misregulation of potassium channels, because psora-4, a drug that blocks the related shaker potassium channel Kv1.3, induced a distinct phenotype (fig. S18A). These results suggest that ERG potassium channels play a role in regulating wakefulness at night that is distinct N H Cl NH2 O HO 4 dpf B6 Drug 1 Drug 2 Drug 3 Drug 4 Drug 5 Drug 6 Drug 7 Drug 8 Activity (seconds/minute) Fig. 1. Larval zebrafish locomotor activity assay. (A) At 4 days post-fertilization (dpf), an individual zebrafish larva is pipetted into each well of a 96-well plate with small molecules. Automated analysis software tracks the movement of each larva for 3 days. Each compound is tested on 10 larvae. (B) Locomotor activity of a representative larva. The rest and wake dynamics were recorded, including the number and duration of rest bouts [i.e., a continuous minute of inactivity (8)], the timing of the first rest bout after a light transition (rest latency), the average waking activity (average activity excluding rest bouts), and the average total activity. Together, these measurements generate a behavioral fingerprint for each compound. the pesticide amitraz coclustered with a2-adrenergic agonists (Fig. 3A), consistent with reports that amitraz causes clonidine-like side effects in mammals and binds to a2-adrenergic receptors (9). Similarly, sinapic acid methyl ether coclustered with N-methyl-D-aspartate (NMDA) receptor antagonists (Fig. 3B), which suggests that the mild anxiolytic effect of sinapic acid in mice is due to NMDA receptor antagonism rather than gaminobutyric acid (GABA) receptor activation, as proposed (10). Indeed, several sinapic acid analogs are known to block NMDA-induced excitotoxicity in vitro (11, 12). Finally, MRS-1220, an adenosine A3 receptor antagonist (13), clustered with monoamine oxidase (MAO) inhibitor antidepressants (Fig. 3C). To directly test whether MRS-1220 inhibits MAO, we performed an in vitro activity assay and found a median inhibitory concentration (IC50) of ~1 mM (Fig. 3D). Thus, behavioral profiling in zebrafish larvae can predict and identify targets of poorly characterized compounds. In addition to revealing a conserved neuropharmacology between zebrafish and mammalian rest/wake states (figs. S8 to S15) (3), behavioral profiling identified additional pathways involved in rest/wake behaviors: 1) L-type calcium channel inhibitors of the verapamil class increased rest with minimal effects on waking activity (fig. S16). This is likely a direct effect on rest regulation, because average waking activity and associated muscle activity were unaffected. 2) Cluster analysis identified two structurally related podocarpatrien-3-ones that specifically increased rest latency (Fig. 4A). These and other compounds also revealed that total rest, rest latency, and waking activity can be disassociated, indicating that these processes can be regulated by distinct mechanisms (3). 3) Although inflammatory cytokine signaling has long been known to promote sleep dur- SCIENCE VOL 327 Rest Latency (17 minutes) 5 Active ActiveBout Bout (4 (4 minutes) minutes) 4 3 Rest Bout (6 minutes) 2 Lights out 1 0 www.sciencemag.org Downloaded from http://science.sciencemag.org/ on May 11, 2016 REPORTS 0 5 15 JANUARY 2010 10 15 20 25 Minutes 30 35 40 349 Rest O 3.5 3 2.5 2 1.5 1 0.5 0 5 4 2 0 20 25 30 35 40 45 H N O OH 55 O 44 33 22 Normalized Rest Normalized Waking Activity 3C 15 C L -701324 2C/3B 2E 10 Cl 2B /4B 2D 5 11 00 D DDT Cl Cl Cl 55 5 4 44 Cl 33 3 Cl 22 2 11 1 00 0 F F 3.5 3 2.5 2 1.5 1 0.5 0 3.5 3 2.5 2 1.5 1 0.5 0 F E Halofantrine 55 3.5 3 2.5 2 1.5 1 0.5 0 Cl 44 N 33 OH Cl 22 11 00 F Methoxyverapamil O 5 3A 2 O N O O 3 O N -3 -2 -1 0 1 2 3 1 0 D 100 alpha2 agonist alpha2 agonist alpha2 agonist not annotated alpha2 agonist alpha2 agonist alpha2 agonist alpha2 agonist alpha2 agonist L-701324 NMDA antagonist L-701324 NMDA antagonist L-701324 NMDA antagonist Sinapic acid methyl ether not annotated Dizocilpine NMDA antagonist Dizocilpine NMDA antagonist Dizocilpine NMDA antagonist C MRS-1220 Phenelzine R(+)-UH-301 Phenelzine Tranylcypromine VOL 327 MRS-1220 80 Pargyline 60 40 20 0 1E10-9 1E10-8 1E10-7 1E10-6 1E10-5 Log [Inhibitor] (M) A3 receptor inhibitor MAO inhibitor 5HT-receptor agonist MAO inhibitor MAO inhibitor demonstrates a conserved vertebrate neuropharmacology, and identifies regulators of rest/wake states. Our findings have two major implications for the fields of neurobiology, pharma- 15 JANUARY 2010 Time Target Name Guanabenz Guanabenz Guanabenz Amitraz Guanfacine Clonidine Guanfacine Guanabenz UK 14304 B 3.5 3 2.5 2 1.5 1 0.5 0 120 MAO-B activity (%) Waking Activity Activity Total Time Rest Latency # Rest Bouts Rest Total A 2F 4 SCIENCE cology, and systems biology. First, behavioral profiling has the potential to complement traditional drug discovery methodologies by combining the physiological relevance of in vivo www.sciencemag.org Downloaded from http://science.sciencemag.org/ on May 11, 2016 Waking Activity B Valproate -O 1 from the role of shaker channels in regulating sleep in flies and mice (17, 18). As applied here, behavioral profiling reveals relationships between drugs and their targets, 350 Waking Activity 3 S.D. Fig. 3. Predicting primary and secondary biological targets for poorly characterized compounds. (A) The pesticide amitraz coclusters with a2adrenergic agonists. (B) Sinapic acid methyl ether coclusters with NMDA antagonists. (C) MRS-1220 coclusters with MAO inhibitors. (D) MRS-1220 inhibits MAO-B activity in an enzymatic assay with an IC50 of ~1 mM. Pargyline is a known MAO-B inhibitor (19). The clusters include repeats from different chemical libraries. Activity Total Rest Total A Rest Bout Length Fig. 2. Hierarchical clustering reveals the diversity of drug-induced behaviors. (A) Behavioral profiles are hierarchically clustered to link compounds to behaviors. Each square of the clustergram represents the average relative value in standard deviations (yellow, higher than controls; blue, lower than controls) for a single behavioral measurement. Dark bars indicate specific clusters analyzed in subsequent figures. (B to F) Normalized waking activity and rest graphs are plotted for behavior-altering compounds (red trace; average of 10 larvae) and representative controls (10 blue traces; average of 10 larvae each). Compounds that altered behavior include the mood stabilizer and antiepileptic drug sodium valproate (B), the psychotomimetic NMDA antagonist L701324 (C), the sodium channel agonist pesticide DDT (D), the antimalarial halofantrine (E), and the calcium channel blocker methoxyverapamil (F). # Rest Bouts Rest Bout Length Rest Latency REPORTS Night DMSO 1 O O DMSO 2 O O Fig. 4. Unexpected regulators of zebrafish rest/wake states. (A) Podocarpatrien-3-one analogs increase rest latency, the time from light transition to the first rest bout, relative to controls. Error bars represent SEM. (B) Many wake-promoting anti-inflammatory and immunomodulating compounds cocluster (blue, NSAIDs; green, glucocorticoids; pink, PDE inhibitors; yellow, miscellaneous antiinflammatories; white, no anti-inflammatory C annotation). See fig. S17 for an extended list. (C) A cluster of ERG-blocking compounds specifically increases waking activity at night. (D) Rank-sorting the data set by correlation to the ERG blocking cluster results in a significant enrichment of ERG blockers in the top ranks [P < 10–13 by the Kolmogorov-Smirnov statistic (3)]. Black lines indicate known ERG blockers; red indicates high correlation, green indicates low assays with high-throughput, low-cost screening (3). Future screens can be expanded to include many more uncharacterized compounds and to assay additional phenotypes, including those associated with human psychiatric disorders. In this way, behavioral profiling can characterize large classes of compounds and reveal differences in effectiveness, potential side effects, and combinatorial properties that might not be detected in vitro. Second, behavioral profiling allows for the systematic dissection of the pharmacology of complex behaviors. Our screen profiled the effects of dozens of neurotransmitter pathways and identified small molecules that regulate discrete aspects of rest/wake states. Future experiments can test drug combinations to identify synergistic or antagonistic effects among psychotropic compounds and to build interaction maps. High-throughput behavioral profiling thus may enable application of the logic and approaches of systems biology to neuropharmacology and behavior. Diflunisal Piroxicam Flecainide Flunisolide Atrazine Capsazepine Cyclosporin A CONH Oxethazaine Spectinomycin Tetrahydrotrimethylhispidin Theaflavin Equilin SKF 94836 Aminophenazone Diplosalsalate Fosfosal Clobetasol Fenoprofen Nicotine (-)-Nicotine Fenoprofen 5-aminopentanoic acid Catechin tetramethyl ether Pentamidine Valproate Betamethasone Mefloquine Clobetasol Flumethasone Desoxycorticosterone Ethylene glycol analog Dexamethasone 1 548 correlation to the ERG cluster. This analysis also detected potential indirect regulators of ERG function, such as the organophosphate coumaphos (marked with an asterisk), which causes long QT through an unknown mechanism (20). References and Notes SCIENCE Name Mean Correlation Haloperidol 0.943 Halofantrine 0.943 Amperozide 0.929 Terfenadine 0.918 Clozapine 0.913 Promethazine 0.911 Mianserin 0.892 Oxatomide 0.884 Roxithromycin 0.868 Mianserin 0.866 Bepridil 0.865 Meclozine 0.859 0.858 Coumaphos Desmethylclozapine 0.855 Amoxapine 0.839 Clemastine 0.833 Methiothepin 0.832 Astemizole 0.813 Clozapine Halofantrine Amperozide Haloperidol Terfenadine 1. Y. Agid et al., Nat. Rev. Drug Discov. 6, 189 (2007). 2. M. N. Pangalos, L. E. Schechter, O. Hurko, Nat. Rev. Drug Discov. 6, 521 (2007). 3. See supporting material on Science Online. 4. R. T. Peterson, M. C. Fishman, Methods Cell Biol. 76, 569 (2004). 5. R. D. Murphey, H. M. Stern, C. T. Straub, L. I. Zon, Chem. Biol. Drug Des. 68, 213 (2006). 6. T. E. North et al., Nature 447, 1007 (2007). 7. T. E. North et al., Cell 137, 736 (2009). 8. D. A. Prober, J. Rihel, A. A. Onah, R. J. Sung, A. F. Schier, J. Neurosci. 26, 13400 (2006). 9. P. G. Jorens, E. Zandijk, L. Belmans, P. J. Schepens, L. L. Bossaert, Hum. Exp. Toxicol. 16, 600 (1997). 10. B. H. Yoon et al., Life Sci. 81, 234 (2007). 11. A. Matteucci et al., Exp. Brain Res. 167, 641 (2005). 12. M. B. Wie et al., Neurosci. Lett. 225, 93 (1997). 13. K. A. Jacobson et al., Neuropharmacology 36, 1157 (1997). 14. L. Imeri, M. R. Opp, Nat. Rev. Neurosci. 10, 199 (2009). 15. U. Langheinrich, G. Vacun, T. Wagner, Toxicol. Appl. Pharmacol. 193, 370 (2003). 16. E. Raschi, V. Vasina, E. Poluzzi, F. De Ponti, Pharmacol. Res. 57, 181 (2008). 17. C. L. Douglas et al., BMC Biol. 5, 42 (2007). 18. C. Cirelli et al., Nature 434, 1087 (2005). www.sciencemag.org Rank 1 2 3 5 7 8 11 13 21 24 26 33 * 34 36 43 47 48 59 VOL 327 19. C. J. Fowler, T. J. Mantle, K. F. Tipton, Biochem. Pharmacol. 31, 3555 (1982). 20. E. Bar-Meir et al., Crit. Rev. Toxicol. 37, 279 (2007). 21. We thank J. Dowling, D. Milan, and G. Vanderlaan for suggestions and reagents and D. Schoppik, G. Uhl, and I. Woods for critical reading of the manuscript. Supported by a Bristol-Myers Squibb postdoctoral fellowship of the Life Sciences Research Foundation (J.R.), a Helen Hay Whitney Foundation postdoctoral fellowship (D.A.P.), a NIH Pathway to Independence grant (D.A.P.), the Stanley Medical Research Institute (S.J.H.), the Harvard Stem Cell Institute (L.L.R.), NIH grants MH086867 and MH085205 (R.T.P.), and grants from NIH and the McKnight Endowment Fund for Neuroscience (A.F.S.). L.L.R. is a founder of iPierian Inc., a biotechnology company, and is a member of its scientific advisory board. Downloaded from http://science.sciencemag.org/ on May 11, 2016 Day D Waking Activity Activity Total Rest Latency Rest Bout Length B 240 200 160 120 80 40 0 70 60 50 40 30 20 10 0 # Rest Bouts Rest Latency (Minutes) A Rest Total REPORTS Supporting Online Material www.sciencemag.org/cgi/content/full/327/5963/348/DC1 Materials and Methods SOM Text Figs. S1 to S18 Table S1 References 8 October 2009; accepted 11 December 2009 10.1126/science.1183090 15 JANUARY 2010 351 Zebrafish Behavioral Profiling Links Drugs to Biological Targets and Rest/Wake Regulation Jason Rihel, David A. Prober, Anthony Arvanites, Kelvin Lam, Steven Zimmerman, Sumin Jang, Stephen J. Haggarty, David Kokel, Lee L. Rubin, Randall T. Peterson and Alexander F. Schier (January 14, 2010) Science 327 (5963), 348-351. [doi: 10.1126/science.1183090] Behavioral Profiling The complexity of the brain makes it difficult to predict how a drug will affect behavior without direct testing in live animals. Rihel et al. (p. 348) developed a high-throughput assay to assess the effects of thousands of drugs on sleep/wake behaviors of zebrafish larvae. The data set reveals a broad conservation of zebrafish and mammalian sleep/wake pharmacology and identifies pathways that regulate sleep. Moreover, the biological targets of poorly characterized small molecules can be predicted by matching their behavioral profiles to those of well-known drugs. Thus, behavioral profiling in zebrafish offers a cost-effective way to characterize neuroactive drugs and to predict biological targets of novel compounds. This copy is for your personal, non-commercial use only. Article Tools Permissions Visit the online version of this article to access the personalization and article tools: http://science.sciencemag.org/content/327/5963/348 Obtain information about reproducing this article: http://www.sciencemag.org/about/permissions.dtl Science (print ISSN 0036-8075; online ISSN 1095-9203) is published weekly, except the last week in December, by the American Association for the Advancement of Science, 1200 New York Avenue NW, Washington, DC 20005. Copyright 2016 by the American Association for the Advancement of Science; all rights reserved. The title Science is a registered trademark of AAAS. Downloaded from http://science.sciencemag.org/ on May 11, 2016 Editor's Summary www.sciencemag.org/cgi/content/full/327/5963/348/DC1 Supporting Online Material for Zebrafish Behavioral Profiling Links Drugs to Biological Targets and Rest/Wake Regulation Jason Rihel,* David A. Prober, Anthony Arvanites, Kelvin Lam, Steven Zimmerman, Sumin Jang, Stephen J. Haggarty, David Kokel, Lee L. Rubin, Randall T. Peterson, Alexander F. Schier* *To whom correspondence should be addressed. E-mail: schier@fas.harvard.edu (A.F.S.); rihel@fas.harvard.edu (J.R.) Published 15 January 2010, Science 327, 348 (2010) DOI: 10.1126/science.1183090 This PDF file includes: Materials and Methods SOM Text Figs. S1 to S18 Table S1 References Supporting Online Material Table of Contents Materials and Methods, pages 2-4 Supplemental Text 1-7, pages 5-10 Text 1. Psychotropic Drug Discovery, page 5 Text 2. Dose, pages 5-6 Text 3. Therapeutic Classes of Drugs Induce Correlated Behaviors, page 6 Text 4. Polypharmacology, pages 6-7 Text 5. Pharmacological Conservation, pages 7-9 Text 6. Non-overlapping Regulation of Rest/Wake States, page 9 Text 7. High Throughput Behavioral Screening in Practice, page 10 Supplemental Figure Legends, pages 11-14 Figure S1. Expanded hierarchical clustering analysis, pages 15-18 Figure S2. Hierarchical and k-means clustering yield similar cluster architectures, page 19 Figure S3. Expanded k-means clustergram, pages 20-23 Figure S4. Behavioral fingerprints are stable across a range of doses, page 24 Figure S5. Compounds that share biological targets have highly correlated behavioral fingerprints, page 25 Figure S6. Examples of compounds that share biological targets and/or structural similarity that give similar behavioral profiles, page 26 Figure S7. Cluster analysis of multi-target compounds, page 27 Figure S8. Comparison of the effects of adrenergic drugs on rest/wake states in zebrafish to the effects in mammals, page 28 Figure S9. Comparison of the effects of serotonin drugs on rest/wake states in zebrafish to the effects in mammals, page 29 Figure S10. Comparison of the effects of dopamine drugs on rest/wake states in zebrafish to the effects in mammals, page 30 Figure S11. Comparison of the effects of GABAergic drugs on rest/wake states in zebrafish to the effects in mammals, page 31 Figure S12. Comparison of the effects of melatonin drugs on rest/wake states in zebrafish to the effects in mammals, page 32 Figure S13. Comparison of the effects of histamine drugs on rest/wake states in zebrafish to the effects in mammals, page 33 Figure S14. Comparison of the effects of adenosine drugs on rest/wake states in zebrafish to the effects in mammals, page 34 Figure S15. Comparison of the effects of glutamate drugs on rest/wake states in zebrafish to the effects in mammals, page 35 Figure S16. The L-type calcium channel inhibitor, YS-035, dose dependently increases rest with minimal effects on waking activity, page 36 Figure S17. Examples of immunomodulators that co-cluster as daytime-waking activity enhancers, page 37 Figure S18. ERG inhibitors, but not non-ERG blocking anti-histamine analogs, dose 1 dependently increase waking activity at night, page 38 Table S1. Summary of dose response experiments for selected compounds indicates fingerprints are stable across several concentrations, page 39 Supplemental References, pages 40-43. Materials and Methods Small molecule exposure. Larval zebrafish were raised on a 14 hour/10 hour light/dark cycle at 28.5oC. At four days post fertilization (dpf), a single larva was pipetted into each of 80 wells of a 96-well plate (7701-1651; Whatman, Clifton, NJ) containing 650 µL of standard embryo water (0.3 g/L Instant Ocean, 1 mg/L methylene blue, pH 7.0). Larvae were then exposed to small molecules beginning at ~96 hours post fertilization (hpf) by directly pipetting a 10 mM stock solution (in DMSO) into each well (10 animals per compound) for a final chemical concentration of ~10-30 μM and no more than 0.3% DMSO. This concentration of DMSO has no effect on behavior. Small molecules were obtained from the following libraries and screened at the following final concentrations: 1) Spectrum library from Microsource Discovery at ~30 µM (Gaylordsville, CT); 2) Prestwick library from Prestwick Chemical at ~15 µM (Illkirch, France); 3) neurotransmitter (cat#2810), ion channel (cat#2805), and orphan ligand libraries (cat#2825) from Biomol International at ~15 µM (now Enzo Life Sciences, International; Plymouth Meeting, PA);; 4) Sigma LOPAC library at ~10 μM (Sigma-Aldrich, St. Louis, MO). Behavioral recording began at 11 PM, approximately 110 hpf. Locomotor activity analysis. The behavioral assay is adapted from (S1). Locomotor activity was monitored for 60 hours using an automated video tracking system (Videotrack; Viewpoint Life Sciences, Montreal, Quebec, Canada) with a Dinion onethird inch Monochrome camera (model LTC0385; Bosch, Fairpoint, NY) fitted with a fixed-angle megapixel lens (M5018-MP; Computar) and infrared filter. The movement of each larva was recorded using the Videotrack quantization mode, and data from two cameras were collected in alternating minutes by one computer. The 96-well plate and camera were housed inside a custom-modified Zebrabox (Viewpoint, LifeSciences) that was continuously illuminated with infrared lights and illuminated with white lights from 9 AM to 11 PM. The 96-well plate was housed in a chamber filled with circulating water to maintain a constant temperature of 28.5oC. The Videotrack threshold parameters for detection used were: detection threshold, 40; burst, 25; freeze, 4; bin size, 60 seconds. Data analysis. The data was processed using custom PERL, Visual Basic Macros for Microsoft (Seattle, WA) Excel, and Matlab (version R2007a; The Mathworks, Inc). Any one minute bin with less than 0.1 second of total movement was defined as one minute of rest; a rest bout was defined as a continuous string of rest minutes (S1). Rest latency was defined as the length of time from lights on or off to the start of the first rest bout. Total activity was defined as the average amount of detected activity in seconds, including all rest bouts. Waking activity was defined as the total amount of detected activity, excluding all one minute periods of rest. These parameters were calculated for each experimental day and night, standardized to camera-matched DMSO controls, and 2 expressed as +/- standard deviations from controls for hierarchical clustering (see below). We calculated the inter-assay variability as a coefficient of variation (standard deviation of all DMSO controls/mean of DMSO controls*100) for each measurement. For non-normal distributions, including rest length, rest latency, and wakingactivity, the coefficient of variation was calculated following a Box-Cox transformation to a normal distribution. The coefficient of variations (expressed as a %) are as follows: total rest, day 1, 42.3%, day 2, 42.1%, night 1, 24.4%, night 2, 19.9%; rest bouts, day 1, 27.3%, day 2, 21.9%, night 1, 16.7%, night 2, 11.3%; rest bout length, day 1, 14.6%, day 2, 12.9%, night 1, 15.6%, night 2, 11.3%; rest latency, day 1, 35.7%, day 2, 45.8%, night 1, 13.2%, night 2, 20.0%; total activity, day 1, 35.5%, day 2, 28.1%, night 1, 36.3%, night 2, 29.9%; waking activity, day 1, 15.5%, day 2, 17.9%, night 1, 18.9%, night 2, 15.6%. Much of the variability is due normal inter-individual variation. To generate time series data for average rest per 10 minutes and average waking activity per 10 minutes (red traces, e.g. Figure 2B-F), these two parameters were averaged across all 10 replicate animals in 10 minute intervals and then normalized to camera matched controls by dividing each 10 minute rest and 10 minute waking activity measure by the mean daytime rest and activity for camera matched controls, respectively. For comparison, 10 representative sets of DMSO controls (10 larvae each set; e.g. blue traces in Figure 2B-F) are plotted in each time series. The same DMSO controls are shown in all graphs for clarity. To identify compounds that significantly altered behavior, each parameter was compared to camera-matched DMSO controls by Student’s t-test. Compounds were chosen for further analysis if either: 1) the compound altered the same parameter in the same direction at a p value < 10-5 for two consecutive days or nights, 2) the compound affected a behavioral parameter at p<10-10 within the first 24 experimental hours, or 3) the compound altered rest latency at p<0.001 for two consecutive days or nights but had little effect on other parameters. These parameters were chosen to select the largest manageable set of small molecules with the strongest and most consistent effects on behavior while minimizing false positives and compounds with spurious shortterm behavioral alterations. Biological targets were assigned to compounds based on annotations in the Pharmaprojects, Drugbank, Drugs@FDA, and Leadscope Marketed Drugs databases, as well as information supplied by the library vendors and detailed manual literature searches for each compound. Hierarchical and k-means clustering analysis. Clustering analysis was performed with Cluster 3.0 (adapted by Michiel de Hoon from Cluster, written by Michael Eisen, (S2)) and visualized using TreeView (written by Michael Eisen, (S2)). Hierarchical clustering was performed using Pearson uncentered correlation and average linkage. The parameters were weighted as follows: total rest, 1.0; rest bouts, 0.8; rest bout length 0.3, rest latency, 1.0; total activity and waking activity, 1.0. K-means clustering was performed using k=24 and Euclidean distance. To determine the relative position of the k-clusters, the average vector for each cluster was calculated, and these 24 vectors were hierarchically clustered using Euclidean distance. 3 Correlation Analysis: All correlation analysis was performed in Matlab (version R2007a; The Mathworks, Inc). The weighted, uncentered Pearson’s correlation coefficients were calculated for all compound pairs. Compounds were assigned to pharmacological classes as described above. Compounds were considered to share targets if both their target assignment and activity (i.e. agonist or antagonist) overlapped for at least one target. Rank Correlation Analysis: To perform rank correlation analysis for adrenergic antagonists and ERG blocking drugs, the average weighted uncentered Pearson’s correlation coefficient between each compound of the identified cluster and every other small molecule was calculated. Each small molecule was then assigned a rank based on their mean correlation, with rank 1 being the highest mean correlation. Compounds that showed ERG or adrenergic antagonist activity were identified by their pharmacological assignments, and the Kolmogorov-Smirnov statistic was used to assign the p value for whether ERG or adrenergic antagonist compounds were enriched among the higher ranking compounds. The rank correlations were graphically represented in Treeview (S2). Dose Correlation Analysis. Compounds were ordered from Sigma-Aldrich (St. Louis, MO), dissolved in DMSO to a stock concentration of 30 or 45 mM and tested in the locomotor activity assay at final concentrations of 0.15, 0.45, 1.5, 4.5, 15, and 45 µM, or 0.1, 0.3, 1.0, 10, and 30 µM (0.3% DMSO final concentration). Each concentration was tested on 10-20 larvae. To generate the fingerprint for each concentration, the behavioral parameter measurements were standardized to camera-matched DMSO controls and expressed as +/- standard deviations from controls. Two-tailed t-test assessments (Bonferroni corrected for multiple comparisons) determined statistically significant differences of each measurement relative to camera-matched controls. The correlation matrices were generated by calculating the weighted, uncentered Pearson’s correlation coefficient between the fingerprints for all concentration pairs. The fingerprint, significance, and correlation matrix heat maps were generated using Matlab (version R2007a; The Mathworks, Inc.). MAO inhibitor assay. MAO-B activity was assayed as described (S3). 4 Supplemental Texts 1-7 Supplemental Text 1. Psychotropic Drug Discovery The limitations of in vitro drug screening are particularly acute for the development of drugs that modulate the central nervous system (CNS). Surveys of drug discovery success show that CNS drugs take longer to develop (12.6 years versus 6.3 years for cardiovascular drugs) and fail to reach the market more often (7% success rate versus 15%) than other therapeutic indications (S4). The CNS poses a particular challenge to drug discovery because the brain cannot be modeled in vitro. Indeed, most modern psychotropic drugs were first developed for non-psychotropic uses and serendipitously discovered to have behavior-altering side effects (e.g. the MAO inhibitor, iproniazid, was developed to treat tuberculosis and found to alter mood, and the tricyclic antidepressant imipramine was first used as an anti-histamine, (S5)). Furthermore, CNS drugs tend to produce undesirable side effects, including dizziness, tremors, lethargy, and seizures, which are difficult to predict at early stages of the drug discovery pipeline. Also, the mechanism of action for many CNS drugs, including bipolar medications, antidepressants, and antipsychotics, is poorly understood and in many cases may depend on a compound’s complex poly-pharmacological actions across multiple neurotransmitter systems (S6-7). Indeed, efforts to increase efficacy and reduce side effects through the development of newer generations of drugs with more selective target profiles has to date achieved only limited success (S8-9). Alternatives or complements to in vitro target-based screens include phenotype-based, whole organism screens. Such screens have several advantages. First, wholeorganism screens need not be limited to single, well-validated targets. In fact, whole organism screens can identify efficacious compounds with complex mechanisms of action. Second, unwanted side effects, an obstacle in any drug discovery pipeline, can be detected at earlier stages, even during the primary screening process. Third, compounds that produce a behavioral effect are bio-available, another major stumbling block to in vitro based drug discovery pipelines. In principle, whole organism phenotypic screening could replace serendipity, but the requirement for large numbers of phenotyped animals is usually cost and time prohibitive. Behavioral screening in zebrafish larvae offers a cost-effective model system for psychotropic drug characterization and discovery. Supplemental Text 2. Dose Choosing the compound concentration is a challenge for any large-scale small molecule screen. Effective doses can vary among compounds, but it is impractical in most cases to screen at multiple concentrations. The decision to perform our screen in the 10-30 µM range was based on the following considerations. First, we were guided by several previous studies. Developmental screens in zebrafish used concentrations of 10-50 µM (S10-12), single compound behavioral studies in zebrafish were done at 1-100 µM (S13-19), and the connectivity map cell-based screen was performed at 10 µM (S20, 21). Second, we performed a pilot screen of 96 compounds and found that only 10% of 5 the compounds were overtly toxic at the 30 μM range, a percentage deemed acceptable for screening. Third, dose response curves on selected compounds indicated that a concentration of 10-30 µM was an effective range with consistent behavioral effects for most compounds (Table S1 and Fig. S4). Specifically, we found that fingerprints for the same compound were strongly correlated (25/29 cases) across the statistically effective concentration range (Fig. S4). These results show that the behavioral fingerprints are broadly stable across multiple doses. Supplemental Text 3. Therapeutic Classes of Drugs Induce Correlated Behaviors To test the potential of the clustering analysis, we determined whether compounds that share targets are more likely to produce similar phenotypes (Fig. S5A-B). Expanding this correlation analysis to 50 categories of drugs, we found, with few exceptions, that the correlations among related classes of compounds were much larger than chance (Fig. S5C). In many cases, every intra-class pair-wise correlation was larger than the zero target correlation (see Figure Legend S5 for definitions of category abbreviations; + indicates agonist, - indicates antagonist), including the ADR-A2+ (median correlation = 0.853; range = 0.352-0.974), SNRI (median = 0.775; range = 0.453-0.956), 5HT-1A+ (median = 0.791; range = 0.463-0.958), NEURO- (median = 0.759; range = 0.5870.894), DOPA-D1+ (median = 0.885; range = 0.766-0.927), and CHA-NA+ (median = 0.833; range = 0.519-0.985) classes (Fig S5C). In other examples, intra-class pair-wise correlations were much larger except for a few outliers, including the SSRI (median = 0.767 ; range = 0.262-0.963), 5HT-1A- (median = 0.769; range = -0.02-0.930 ), 5HT-2(median = 0.698; range = 0.187-0.977), DOPA-D2+ (median = 0.727; range = 0.0720.982), GABA- (median = 0.722; range = -0.05-0.972), HIST-H1-(ERG) (median = 0.722; range = 0.229-0.911), and NMDA- (median = 0.651; range = -0.419-0.971) classes (Fig. S5C). Not all classes had higher correlations than the no target class, including the adrenergic reuptake class (ADR-U; median = 0.257; range = -0.50-0.959) and the sodium channel antagonist class (CHA-NA-; median = -0.031; range = -0.513 – 0.913). This may reflect the heterogeneity of secondary targets for the compounds of these classes. Supplemental Text 4. Polypharmacology. Many compounds have multiple, potentially non-overlapping targets. In such cases, one would expect that not all compounds that share targets produce similar phenotypes (Fig. S5A-C). For example, outliers of the correlation analysis might reflect the difficulty in assigning compounds to single classes when in fact they have multiple targets. This observation can be used to identify potential polypharmacological effects (Figs. S5C and S7). For example, NMDA antagonist (NMDA-) outliers included compounds that also bind to σ-opioid receptors (e.g. 3-methoxymorphinan), the GABA antagonist (GABA-) outlier tert-butyl-bicyclophosphorothionate (TBPS) also potently blocks chloride channels, the serotonin receptor 1A antagonist (5HT-1A-) outlier S(-)UH-301 is also a dopamine D2/3 receptor agonist, and the dopamine D2 receptor agonist (DOPA-D2+) outlier pergolide is also a serotonin receptor agonist (Fig S5C). Our correlation analysis can also uncover higher order associations among drugs with multiple targets, such as the high correlation between drugs that share dopamine reuptake inhibition and acetylcholine antagonism (Figure S7A-B). Furthermore, the clustering analysis can 6 reveal unexpected associations between annotated drug classes. For example, a cluster of known α1-adrenergic receptor antagonists (ifenprodil, terazosin, and 5-methylurapidil) also cluster with several serotonin receptor modulators, including NAN-190, RU-24969, WAY-100635, spirotraxine, and buspirone (Fig. S7C-D). Intriguingly, buspirone and spirotraxine do not strongly bind to α1-adrenergic receptors in vitro yet can show in vivo adrenergic activity in specific pharmacological contexts (22). These results show that behavioral profiling can uncover associations between multi-target drugs whose properties are not fully predicted by in vitro studies. Supplemental Text 5. Pharmacological Conservation (Figs. S8-15). We systematically compared the behavioral effects of agonists and antagonists of the major neurotransmitter systems between zebrafish and mammals. In most cases, confidence in the conservation between zebrafish and mammals is enhanced when multiple compounds known to affect the same target elicit similar phenotypes and when agonist/antagonist pairs elicit opposing phenotypes. We discuss each class in more detail below. Adrenaline (Fig. S8). In zebrafish, α2-adrenergic agonists decreased wakefulness with little effect on rest, while activation of β-adrenergic receptors selectively reduced total rest at night. Conversely, β-adrenergic receptor antagonists increased total rest. α1adrenergic antagonists gave a “mixed” phenotype of increased waking activity but also increased rest. These effects are broadly consistent with those observed in mammals (S23-35). Serotonin (Fig. S9). The analysis of serotonin-regulating drugs is complicated because most, if not all, serotonin-modulating drugs have considerable affinity for non-serotonin receptors, especially dopaminergic and adrenergic receptors. Thus, the drugs chosen for the table in Figure S9 combine serotonin-signaling selectivity, consistency of phenotype, and reproducibility (i.e. multiple hits within the screen of the same or similar compounds). As often as possible, the drugs shown have known mammalian phenotypes (S36-55). The complexity of the phenotypes we observed with serotonergic agonists and antagonists is similar to the controversial and contradictory nature of the mammalian literature pertaining to these drugs. This may reflect the difficulty in isolating the drugs’ effects on serotonin signaling from other secondary effects, differences between short-term and long-term exposure, or complex signaling interactions among different populations of serotonergic neurons in the brain. For example, in mammals agonists and antagonists of serotonin receptor 1A both cause short-term reduction of sleep and increase in wakefulness followed by longer-term increases in sleep and reduced activity (S36-40, S45-47). In long-term experiments, both classes of drugs increased rest in zebrafish. Only buspirone had an observed short-term increase in waking during the first night of the experiment (black arrow in Fig. S9). Serotonin receptor 2/3 antagonists have paradoxical effects in mammals, increasing both exploratory behavior and sleep (S38, S44, S49-52). Similarly, both waking activity and total rest were increased in zebrafish. Finally, SSRIs consistently decreased waking activity and increased rest in zebrafish; in human patients, SSRIs 7 often improve insomnia in depressed patients but can have biphasic effects on sleep, with long-term decreases in sleep in some mammalian models (S53-55). Dopamine (Fig. S10). With one notable exception, dopamine receptor agonists and antagonists produce similar phenotypes in mammals and zebrafish (S56-67). For example, the D2-receptor agonists consistently reduced waking activity and increased rest in zebrafish, as they do at low concentrations in mammals (S60-63). This effect was receptor subtype selective, as the D2/D3 receptor agonists quinelorane and quinpirole only reduced waking activity (S64, S65). As another example of conservation, D2-receptor antagonists, several of which are used as anti-psychotics, increase waking activity and rest in zebrafish and mammals (S57, S62, S67). Previous work indicated that antipsychotics produce locomotor defects in zebrafish larvae (S1516). The only clear examples of non-conserved pharmacology in our study were the dopamine D1 agonists (Fig. S10, marked in gray), all of which had little effect on waking activity but greatly increased total rest in zebrafish. In all mammalian species tested, dopamine D1 agonists increased waking (S56-59). This could indicate a distinct role for the zebrafish orthologs of D1 receptors in the control of behavior or that these dopamine D1 agonist drugs have altered target selectivity in zebrafish. GABA (Fig. S11). While many of the GABA-regulating benzodiazepine drugs were toxic at the concentrations used in our screen, the GABA-A agonists GBLD-345 and avermectin B1 increased total rest and had only a small effect on waking activity (S68). Although only represented by a single hit in the screen, the GABA-B agonist CGP13501 (Fig. S11, marked in gray) slightly increased waking activity at night with very modest increases in rest during the day, even though this drug is hypnotic in mammals (S69). In contrast, many GABA-A antagonists dramatically increased waking activity, possibly reflecting pro-convulsant effects of these drugs on zebrafish larvae, which is consistent with the mammalian literature (S70-72) and with previous work in zebrafish (S13, S17, S19). Tracazolate, an anxiolytic acting as an allosteric modulator of GABAA receptors, modestly increased waking activity in zebrafish; in mammals, tracazolate can both increase or decrease locomotor activity (S73, S74). Intriguingly, the neuroactive steroid GABA agonists allopregnanolone, pregnanolone, and alfadolone increased both total rest and waking activity specifically at night (S75-77). As neuroactive steroids have additional functions in mammalian brains, including modulation of NMDA receptors (S75), this mixed phenotype may reflect the polypharmacology of these compounds. Melatonin (Fig. S12). Although only a few examples were present in our screen, melatonin-modulating drugs gave results that are consistent with those observed in mammals (S78-82) and previous work in zebrafish (S14). Melatonin slightly increased rest in our long-term experiments. In addition, the melatonin agonist 8-methoxy-1propionamidotetralin decreased waking activity and increased rest. An exception was the agonist IIK7 (S78), which slightly increased waking activity at night and had small effects on rest. 8 Histamine (Fig. S13). Histamine antagonists identified in our screen tended to increase rest, decrease waking activity, or both. This increased rest in zebrafish is consistent with the mammalian literature, although it should be noted that anti-histamine drugs that do not cross the blood-brain barrier in humans, such as loratadine, tend to be less sedating than the older generation of drugs that do cross the blood-brain barrier (S8387). Our work is also consistent with previous work on anti-histamines in zebrafish larvae (S13, S18). Notably, the anti-histamine diphenylpyraline increased waking activity, consistent with reports of psychostimulatory effects in rodents (S87). Also, as noted in the main text and Figures 4C-D and S18, anti-histamines that block the human ether-a-go-go related potassium channel (ERG) consistently increased waking activity at night, with modest effects on rest in zebrafish larvae. Adenosine (Fig. S14). Consistent with mammals, adenosine receptor agonists increased rest in zebrafish larvae, while adenosine receptor A1 antagonists increased waking activity and reduced rest (S88-93). Although behavioral effects of the adenosine A3 antagonist MRS-1220 are unknown in mammals, it decreased waking activity and increased rest in zebrafish. This phenotype is consistent with its inhibitory effects on MAO (Figure 3D). Glutamate (Fig. S15). All NMDA receptor antagonists identified in the screen dramatically increased waking activity during the day and night, consistent with the effects observed in mammals (S94, S95). Muscarinic glutamate receptor 5 (mGluR5) antagonists selectively increased rest, with little effect on waking activity. Antagonists of mGluR5 can block drug-induced hyperlocomotion, down-regulate bursting of prefrontal cortical neurons in awake rats, and have anxiolytic properties in rodents (S96, S97). Supplemental Text 6. Non-overlapping Regulation of Rest/Wake States. Many pharmacological agents selectively altered waking activity, rest latency, or total rest. For example, verapamil related L-type calcium channel inhibitors increased rest with no effect on waking activity (Fig. S16), while β-adrenergic agonists, including clenbuterol and fenoterol, decreased rest only (Fig. S8). Non-competitive NMDA receptor antagonists, including the psychotomimetics dizocilpine (MK-801) and L701324, predominantly increased waking activity with minimal effects on total rest (Figs. 2C and S15), the D2/D3 agonist, ropinirole, predominantly decreased waking activity only (Fig. S10), and podocarpatrien-3-one analogs predominantly altered only rest latency (Fig. 4A). These single parameter effects can also be selective for day versus night. For example, many anti-inflammatory compounds only increased waking activity during the day (Figs. 2B, 4B and S17), while ERG-blocking drugs increased waking activity at night (Figs. 2E, 4C-D, S18). Finally, some compounds can affect waking activity and total rest in opposite directions (e.g. increase both waking activity and total rest). For example, the α1-adrenergic antagonists ifenprodil, the antimalarial quinacrine, and the steroidal GABA agonist alfadolone, increased both waking activity and total rest (Figs S7C, S11). These observations suggest that the behavioral parameters of waking activity, total rest, and rest latency during the day and the night can be under the control of distinct pharmacological mechanisms. 9 Supplemental Text 7. High Throughput Behavioral Screening in Practice Behavioral profiling in zebrafish is highly efficient. Our current zebrafish behavior room (~200 sq. ft.) has 16 cameras that can each observe 80 wells of a 96-well plate, for a total of 1280 larvae. Using our original screening method of 10 larvae per compound and including 10 control wells for each camera, we can screen 112 compounds (16 cameras x 7 drugs per camera) every three days, or 224 compounds per week. Using the latest videotracking software, which can track all 96 wells of the plate, and cutting the number of larvae per drug to eight expands our capacity to 352 compounds per week (16 cameras X 11 drugs per camera X 2 runs per week). A single technician can set up the entire behavioral room in less than 4 hours, including fish husbandry, larval pipetting, drug dispensing, and software setup (an 8 hour commitment per week). Expanding the screen to 115 cameras and 5 technicians (a total commitment of 40 hours per week) would increase the throughput to more than 10,000 compounds per month and more than 100,000 per year. 10 Supplemental Figure and Table Legends Figure S1. Expanded hierarchical clustering analysis. This is an expanded version of Figure 2A in which the name of each chemical in the clustergram can be seen. Each row represents a different chemical, and each column represents a behavioral measurement. From left to right, these measurements are: the rest total, the number of rest bouts, the rest bout length, the rest latency, the total activity, and the waking activity. The black bars indicate night measurements; the white bars indicate day measurements. Yellow indicates that the value is increased relative to controls; blue indicates that the value is decreased, as in Figure 2A. The measurements are normalized as standard deviations from control values. Figure S2. Hierarchical and k-means clustering yield similar cluster architectures. Each row represents a different chemical, and each column represents a behavioral measurement. From left to right, these measurements are: the rest total, the number of rest bouts, the rest bout length, the rest latency, the total activity, and the waking activity. The black bars indicate night measurements; the white bars indicate day measurements. Yellow indicates that the value is increased relative to controls; blue indicates that the value is decreased, as in Figure 2A. The measurements are normalized as standard deviations from control values. Figure S3. Expanded k-means clustergram. This is an expanded version of Figure S2 in which the name of each chemical in the clustergram can be seen. Each row represents a different chemical, and each column represents a behavioral measurement. From left to right, these measurements are: the rest total, the number of rest bouts, the rest bout length, the rest latency, the total activity, and the waking activity. The black bars indicate night measurements; the white bars indicate day measurements. Yellow indicates that the value is increased relative to controls; blue indicates that the value is decreased, as in Figure 2A. The measurements are normalized as standard deviations from control values. Figure S4. Behavioral fingerprints are stable across a range of doses. Select compounds were tested for behavioral effects at multiple concentrations (see Table S1 for additional examples and summary data). First, the fingerprints for each dose were calculated as standard deviations from DMSO controls (‘Fingerprint’, left panels). In general, these fingerprints are stable across multiple concentrations until the dose is too low to elicit a phenotype. To assess the stability of single drug fingerprints over multiple concentrations, the Pearson uncentered correlation coefficient was calculated pairwise between each dose (‘correlation matrix’, right panels). With the exception of pergolide and several other ergoline derivatives, which have distinct fingerprints at high versus low concentrations, these examples have relatively stable fingerprints from the highest dose tested (45 μM) to the lowest effective doses (150 nM for NAN-190 and 11 betamethasone, 450 nM for ropinirole, 1.5 µM for clonidine and buspirone), as indicated by the high correlations (red boxes). See Materials and Methods for additional information. Figure S5. Compounds that share biological targets have highly correlated behavioral fingerprints. (A) The distribution of all pair-wise correlation coefficients (Pearson weighted, uncentered; see Materials and Methods) for compounds that share at least 1 target (blue) is shifted to higher values compared to compounds that share 0 targets (magenta). This skewing is strong despite the fact that these compounds can have many divergent targets in addition to the shared target. Each pair of compounds is represented once, even if they share multiple targets. (B) Box-whisker plot comparing correlations between compounds with 0 shared targets, compounds with at least 1 shared target, and repeats of the same compound from different chemical libraries. For each measure, the blue box represents the interquartile range between the 25th and 75th percentiles; the red line marks the sample median; the whiskers extend from the box ends to values within 1.5 times the interquartile distance; red crosses mark outlier values beyond the 1.5 interquartile distance from the box ends. (C) Box-whisker plots of correlation coefficients within biologically related classes of compounds. For comparison, the mean correlation of compounds that share 0 targets is plotted as a green line (correlation = 0.266). The number of compounds used for comparisons within each class is indicated (N). See supplemental text 3 for a detailed discussion of specific classes. For all classes, a (-) sign indicates an inhibitor/antagonist and a (+) sign indicates an agonist. The classes are: α-adrenergic-receptor 1, ADR-A1; α-adrenergic receptor-2, ADR-A2; β-adrenergic, ADR-B; noradrenaline reuptake inhibitor, ADR-U-; serotonin/noradrenaline reuptake inhibitor, SNRI; selective serotonin reuptake inhibitor, SSRI; serotonin receptor-1A, 5HT-1A; serotonin receptor-1D, 5HT-1D; serotonin receptor-2, 5HT-2; serotonin receptor-2/3, 5HT-2/3; serotonin receptor 4, 5HT-4; monoamine oxidase inhibitor, MAO-; neurotransmitter inhibitor (reserpine class), NEURO-; dopamine receptor, DOPA; dopamine D1 receptor, DOPA-D1; dopamine D2 receptor, DOPA-D2; dopamine D2/3 receptor, DOPA-D2/3; dopamine D3 receptor, DOPA-D3; dopamine D4 receptor, DOPA-D4; γ-butyric acid receptor, GABA; histamine H1 receptor, HIST-H1; ether-a-go-go-related potassium channel, ERG; adenosine signaling, ADS; metabotropic glutamate receptor 5, mGLUR5; N-methyl-D-aspartic acid receptor, NMDA; acetylcholinesterase inhibitor, ACH-ES- IRev, irreversible; Rev, reversible; muscarinic acetylcholine receptor; ACH-M; nicotinic acetylcholine receptor, ACH-N; acetylcholine synthesis, ACH-SY; L-type calcium channel; CHA-CA-L; sodium channel, CHA-NA; peroxisome proliferator-activated receptor, alpha, PPAR-A. Figure S6. Examples of compounds that share biological targets and/or structural similarity that give similar behavioral profiles. (A) Structurally divergent selective serotonin reuptake inhibitors (SSRIs) similarly decrease waking activity and increase rest. (B) Structurally related insecticides dramatically increase waking activity independent of the time of day. The graphs represent the normalized waking activity and total rest for behavior-altering compounds (red trace; average of 10 larvae) and representative controls (10 blue traces; average of 10 larvae each). 12 Figure S7. Cluster analysis of multi-target compounds. A dopamine reuptake inhibitor (DOPA-U) with muscarinic acetylcholine antagonist (ACH-M-) activity does not correlate well with (A) compounds with only DOPA-U activity or (B) compounds with only ACH-Mactivity. It does, however, show high correlation with other compounds known to share both properties (B). (C) α1-adrenergic receptor antagonists (marked in blue) form a large cluster with serotonin modulators (marked in green) that are known to also have α1- adrenergic receptor antagonist activity in vivo. (D) Rank-correlations of compounds across the entire dataset compared to the α1-adrenergic receptor antagonist cluster of ifenprodil, terazosin, and 5-methyl-urapidil enriches for compounds with α1-adrenergic receptor antagonism. In the rank-graph, the black lines indicate compounds with known α1-adrenergic antagonism; red indicates high correlation, green indicates low correlation. Compounds with α1-adrenergic antagonism are highly enriched in the top ranks (p < 10-23; see Materials and Methods). Figure S8-15. Comparison of the effects of neuroactive drugs on rest/wake states in zebrafish to the effects in mammals. The graphs represent the waking activity and rest for representative agonists and antagonists of each class (red trace; average of 10 larvae) and DMSO controls (10 blue traces; average of 10 larvae each). Each plotted example is typical for the entire class of compounds. The tables provide a more comprehensive list of agonists and antagonists of each receptor subtype. The tables summarize the overall direction and magnitude of the observed effects of the drugs on zebrafish wake and rest behavior (up arrow, increased; down arrow, decreased; a dashed line indicates no change; a small arrow indicates a smaller relative effect, while a large arrow indicates a larger relative effect). See supplemental text 5 for a more detailed discussion of each phenotype. Figure S16. The L-type calcium channel inhibitor, YS-035, dose dependently increases rest with minimal effects on waking activity. (A) Waking activity and rest graphs are shown for three structurally related L-type calcium channel inhibitors (red trace = average of 10 larvae) and representative DMSO controls (10 blue traces = average of 10 larvae). (B) YS-035 increases the time spent at rest during both the day (red) and night (blue) in a dose dependent fashion. Each point indicates the average minutes of rest per hour for 10 larvae at each YS-035 concentration. The error bars represent +/SEM. (C) YS-035 has little or no effect on waking activity at all concentrations tested, suggesting that muscle function is not dramatically perturbed. Each point indicates the average seconds of waking activity every 10 minutes during the day (red) or night (blue) for 10 larvae at each YS-035 concentration. Error bars represent +/- SEM (B, C). Figure S17. Examples of immunomodulators that co-cluster as daytime-waking activity enhancers. (A) The table lists anti-inflammatory agents that selectively increased daytime waking activity (expanded examples from Figure 4B). (B) Waking activity and rest graphs are shown for compounds from each major class (red trace = average of 10 larvae) and representative controls (10 blue traces = average of 10 larvae). Figure S18. ERG inhibitors, but not non-ERG blocking anti-histamine analogs, dose dependently increase waking activity at night. (A) Waking activity and rest graphs are 13 shown for two ERG-blocking compounds (red trace = average of 10 larvae) and representative controls (10 blue traces = average of 10 larvae). Both compounds increased waking activity at night without affecting rest. Psora-4, which blocks Kv1.3 shaker channels, increased nighttime waking activity and also strongly decreased rest, a phenotype distinct from ERG blockers. Thus, the ERG phenotype is not the result of general potassium channel misregulation. (B) Dose response curves for ERG blocking and ERG non-blocking analogs are shown. Each point indicates the waking activity at night (seconds per minute) averaged for 10 larvae. Cisapride and dofetilide, which have ERG blocking activity, dose-dependently increased nighttime wakefulness, while the non-ERG blocking histamine H1 receptor antagonists fexofenadine and cetirizine had no effect on wakefulness. Another non-ERG blocking anti-histamine, loratadine, reduced waking activity. Error bars represent +/- SEM. The 0 M concentration is a DMSO control. Table S1. Summary of dose response experiments for selected compounds indicates fingerprints are stable across several concentrations. This table is an expansion of the dose response fingerprints shown in Fig. S4. Note that only ergoline-derived compounds (bottom of table) have complex dose dependent effects (i.e. different nontoxic fingerprints at high versus low concentrations). This complex dose dependence is likely due to the high affinity that many ergoline drugs have for multiple receptor families and sub-types, including dopamine, serotonin, and adrenergic receptors (for example, see (S98)). 14 Waking Activity Activity Total Rest Latency # Rest Bouts Rest Bout Length Rest Total Figure S1 NAME Senecrassidol 6-Acetate Glycine MG-624 Physcion Budesonide Diclofenac Sodium 14-Methoxy-4,4-Bisnor-8,11,13-Podocarpatrien-3-one 5-beta-12-Methoxy-4,4-Bisnor-8,11,13-Podocarpatrien-3-one Enoxolone 11-alpha-Acetoxykhivorin Dinitolmide Chlorthalidone 3-beta-Acetoxydeoxodihydrogedunin Kynurenine Estrone Acetate Betamethasone Clenbuterol Hydrochloride Telmisartan SB 206553 Hydrochloride Psora-4 Fenoterol Hydrobromide Ornithine alpha-Ketoglutarate Chlorophyllide Cu Complex Sodium Salt Oxiconazole Nitrate Sulfaguanidine Benzyl Penicillin Potassium Retinoic Acid p-Hydroxyanilide Pimozide Chlorpromazine Hydrochloride Mitotane SB 228357 Maprotiline Hydrochloride Amitryptiline Hydrochloride R(-)-Isoproterenol (+)-Bitartrate Maprotiline Hydrochloride Carbenoxolone Sodium I-OMe-Tyrphostin AG 538 (-)-Eseroline Fumarate Bacitracin Leflunomide Meclizine Hydrochloride Pancuronium Bromide Fenoldopam Chloroethylclonidine Dihydrochloide Mecamylamine Hydrochloride 1-Benzyl-1-Methyl-4-Cyclopentylmethoxycarbonylpiperidinium Bromide Tegaserod Maleate Austricine Azobenzene Diflunisal Piroxicam Flecanide Flunisolide Atrazine Capsazepine Cyclosporin A 2-Cyclooctyl-2-Hydroxyethylamine Hydrochloride Oxethazaine Spectinomycin Hydrochloide Tetrahydrotrimethylhispidin Theaflavin Digallate Equilin SKF 94836 Aminophenazone Diplosalsalate Fosfosal Clobetasol Propionate Fenoprofen Nicotine Ditartrate (-)-Nicotine Fenoprofen Calcium Salt Dihydrate 5-Aminopentanoic Acid Hydrochloride Catechin Tetramethylether Pentamidine Isethionate Valproate Sodium Betamethasone Mefloquine Hydrochloride Clobetasol Propionate Flumethasone Desoxycorticosterone Acetate Ethylene Glycol-Bis(2-Aminoethylether)-N,N,N,N-Tetraacetic Acid Dexamethasone Propentofylline Bopindolol Malonate Betamethasone Valerate Bretylium Tosylate Pancuronium Bromide Cepharanthine Ursolic Acid Benzamil Hydrochloride Cefoxitin Sodium Salt Papaverine Hydrochloride Medrysone 6-alpha-Methylprednisolone 6,7-Dichloroquinoxaline-2,3-dione L-689560 7-Chlorokynurenic Acid SDZ 220-581 IEM-1460 Finasteride Bufexamac Ro 20-1724 Cisapride (+)-Tubocurarine Chloide Hydrocortisone L-701324 L-701324 L-701324 Sinapic Acid Methyl Ether Dizocilpine Maleate (-)-MK-801 Hydrogen Maleate (+)-MK-801 Allopregnanolone Tetrandrine Diphenylpyraline Hydrochloride Spiperone TG003 Hexylresorcinol Monobenzone 2,4-Dihydroxychalcone 4-Glucoside Astemizole 3-(1H-Imidazol-4-yl)Propyl Di(p-Fluorophenyl)Methyl Ether Hydrochloride Dichlorodiphenyltrichloroethane Tracazolate Hydrochloride 1,4-PBIT Dihydrobromide Menadione (-)-Mk-801 Hydrogen Maleate S,S,S,-Tributylphosphorotrithioate Endosulfan Coumaphos Amoxapine Megestrol Acetate L-701252 Finasteride Rutilantinone Terfenadine N-Desmethylclozapine Mianserin Hydrochloride ODQ Clorgyline Hydrochloride Amoxapine Activity 1 NMDA+ ACH-NBACTARACHARACH- Activity 2 Activity3 Activity 4 LIPCOR+ DIUR+ ESTR+ ARACHADR-B-2+ ANG-2-15HT-2-B/CCHA-KADR-B+ FUNGBACTBACTAPOP+ DOPA-D-2DOPA-D-2ESTR5HT-2-B/CADR-UADR-UADR-B-2+ ADR-U- LIPCOR+ 5HT-2-ADOPA-D-1CHA-NA? GluR+ ADR-A-1- DOPA-U5HT1-2- HIST-H-1- 5HT-U-(weak) 5HT-UCHA-KADR-B-1+ 5HT-U-(weak) KI-IGF-1OPI-M+ ACH-(weak) BACTDH-HYOKI-GFPLHISTACHACH-NDOPA-D-1-A+ ADR-A-2+ ADR-A-1ADR-A-2+ ACH-NACH-T5HT-4+ 5HT-2-BLP-P-A-2SY-PGSY-PGCHA-NAARACHHERBVANIMNEURT- IM- PPAR-G+ ALOX5- COXCOXLIPCOR+ IM- GluR+ IM- GluR+ IM- GluR+ IMIM- GluR+ GluR+ IM- GluR+ LIPCOR+ IMNA/K-ATPase- GluR+ CHA-Na+ PNMT- BACTNf-kB-? ESTR+ ES-P-C-3ES-P-C-? ES-P-CARACHSY-PGACH-N+ ACH-N+ SY-PGDNAHDACARACHCALMARACHARACHCOR-M+ ACE-2ARACHES-P-CADR-B-1ARACHADR-BACH-NAPOPARACHCHA-NA-CaSY-CWES-P-C-4ARACHARACHEAA-GEAA-GEAA-GEAA-GEAA-GRED-5ASY-PGES-P-C-45HT-4+ ACH-NARACHEAA-GEAA-GEAA-GEAA-GEAA-GEAA-GGABA-A+ CHA-CAHIST-H-1DOPA-D-2KI-CLK- LIPCOR+ COXCOX- GABA+ LIPCOR+ LIPCOR+ LIPCOR+ MR+ CHEL+ LIPCOR+ ADS-/+ NF-KBLIPCOR+ IMIM- GluR+ LIPCOR+ LIPCOR+ NMDANMDANMDANMDAAMPA-R- IMIM- GluR+ GluR+ COX- OX-C- BACT- NMDA- ACH+(indirect) CHA-KACH+ 5HT-3LIPCOR+ IMNMDANMDANMDA- GluR+ NMDANMDANMDACHA-CACHA-K-(Ca+) 5HT-1-A- 5HT-2-A- SY-PGHIST-1HIST-H3-/+ CHA-NA+ GABA-ANO-SVITA+ EAA-GACHGABA-AACHADR-UESTR+ EAA-GRED-5ABACTHIST-15HT-2-CADR-UCYC-GUMAO-AADR-U- CHA-KINSECTGABA-A+ NMDA- 5HT-UPROG+ NMDAANDRCHA-KACH-M1+ ADR-A-25HT-U- HIST- 5HT-2-A/2-C- 15 Figure S1(Cont) NAME Loxapine Succinate Propazine Bepridil Hydrochloride 1S,9R-Hydrastine Dacthal Chlordane 7-Oxocallitrisic Acid, Methyl Ester Ibudilast Roxithromycin LY-367265 Naftopidil Dihydrochloride Clozapine Halofantrine Hydrochloride Amperozide Hydrochloride Haloperidol Terfenadine Fiduxosin Hydrochloride Strobane Oxatomide 3-alpha-Bis-(4-Fluorophenyl)Methoxytropane Dihydroergotamine Mesylate Methiothepin Maleate Mianserin Methoxychlor Toxaphene Heptachlor Aldrin Bromo-3-Hydroxy-4-(Succin-2-yl)-Caryolane gamma-Lactone Cyproterone Acetate Promethazine Hydrochloride Tyrphostin AG 494 8-Cyclopentyl-1,3-Dipropylxanthine Flutamide Derrusnin Pregnenolone Deptropine Citrate Clemastine Spermine Tetrahydrochloride Homopterocarpin Aconitine Cinnarazine Verapamil Hydrochloride Benztropine (1S,9R)-Beta-Hydrastine Disulfoton Naltriben Methanesulfonate Benzanthrone Vinpocetine Oxymetazoline Hydrochloride 3-Isobutyl-1-Methylxanthine 2-[[B-(4-Hydroxyphenol)Ethyl]Aminoethyl]-1-Tetralone Niloticin Meclozine Dihydrochloride CGP-13501 Mesulergine Hydrochloride Thioridazine Hydrochloride Hydroxyprogesterone Caproate Nicolsamide 2-Methoxyestradiol Tolnaftate Danazol (1-[(4-Chlorophenyl)phenyl-methyl]-4-methylpiperazine) Beclomethasone Dipropionate Astemizole Icilin Oxaprozin Ro 25-6981 hydrochloride Droperidol Ethynodiol Diacetate Bromocryptine Mesylate Androsterone Acetate 3,4-Dimethoxyflavone Trihexyphenidyl Hydrochloride Vincamine Cephaeline Dihydrochloride Heptahydrate LY-53857 Amodiaquine Dihydrochloride Risperidone Doxazosin Mesylate Alcuronium Chloride L-765314 Prazosin Benperidol Saquinavir Mesylate Butylparaben Ketanserin Tartrate Papaverine Hydrochloride Nomegestrol Acetate PD 168077 Quinacrine Hydrochloride Ifenprodil Tartrate Phenamil Epiandrosterone Loperamide L-701252 BWB-70C Strophanthidinic Acid Lactone Acetate Domperidone Spiperone Spiperone Hydrochloride Pancuronium Bromide Amsacrine Hydrochloride Dihydroergotamine Methanesulfonate Medroxyprogesterone Acetate WB 4101 Hydrochloride 3-Methoxymorphinan Hydrochloride L-741626 AMI-193 Spiroxatrine AMI-193 trans-Dehydroandrosterone DO 897/99 Triptophenolide Azaperone WB 4101 Hydrochloride R(+)-Terguride Azaperone SB 205384 Alfadolone Acetate 3-Methyl-6-(3-[Trifluoromethyl]Phenyl)-1,2,4-Triazolo[4,3-B]Pyridazine S(-)-Lisuride Dihydroergocristine 4-Androstene-3,17-dione Pirenperone Ketanserin Tartrate LY-165163 Astemizole Chlormadinone Acetate Totarol Metergoline Phenylmethyl Ester Acetopromazine Maleate Salt Metergoline BP554 R-(-)-Fluoxetine Hydrochloride Methapyrilene Hydrochloride Paroxetine Hydrochloride Hemihydrate GR 4661 Doxazosin Mesylate TCPOBOP Activity 1 DOPA-D-1HERBCHA-CAGABA-AHERBGABA-AES-P-C-4PRT-50S5HT-2-AADR-A-15HT-2CHA-K5HT-2DOPA-D-1-2HIST-1ADR-A-1CHA-NA+ HIST-1DOPA-U5HT-1-D+ 5HT-1-2ADR-UCHA-NA+ CHA-NA+ GABA-AGABA-AANDRHIST-1KI-GFEPADS-A-1ANDRGABA-AHISTHIST-1EAA-GCHA-NA+ CHA-CACHA-CAACH-MGABA-AACHOPI-D- Activity 2 Activity3 Activity 4 DOPA-D-2- 5HT-2- (indirect?) CHA-NA- CHA-K- INSECT- ATPP-Ca/MgATPP-Na/K- NF-kB5HT-UADR-U-? DOPA-D-2- 5HT-2-? ADR- DOPA-D-2NMDACHA-K- HIST-H-1- CHA-K- INSECTACH-M5HT-1-A+ DOPA-D-2ADR-A-2INSECTINSECTINSECTINSECT- ADR-A-2-ADOPA-D-2/D-3 HIST- 5HT-2-A/2-C- ATPP-Ca/MgATPP-Na/KATPP-Ca/MgATPP-Na/K- ACH-M- 5HT-2- calmodulin- ACH-MACH-M-? EAA-G+ NMDA- HIST-H-1- DOPA-D-2-ACH-M- DOPA-U- HIST- INSECT- CHA-NAADR-A-1+ ES-P-CADR-A-1- ES-P-C-1ADR-A-2+ ADS- HISTGABA-B+ DOPA-D-2+ DOPA-D-2ESTR+ KI-TYRHIF-1FUNGLHRHHISTARACHHIST-1TRP-M8+ SY-PGEAA-GDOPA-D-2PROG+ DOPA-D-2+ ANDR+ AHRACH-M-1ADR-A-15HT-4+? 5HT-2- ACH5HT-2-C5HT-2ESTR+ ADRPR+ CHA-K- IM- GluR+ ESTRLIPCOR+ CHA-K- COXNMDA-NR2-BCHA-KESTR+ CREB+ SSTATIN CHA-CA-? CHA-NA- DOPA-D-2- 5HT-2ADR-A-1ACH-MADR-A-1ADR-A-1DOPA-D-2- CHA-KPROTTNF-alpha+ ESTR? 5HT-2DOPA? ES-P-C-4PROG+ ANDRDOPA-D-4+ ACH-M+ Lipase-A-2ADR-A-1EAA-GCHA-NAESTRCHA-CAOPI+ EAA-GNMDAOX-LP-5ATPP-Na/KDOPA-D-2DOPA-D-2- 5HT-1-ADOPA-D-2- 5HT-1-AACH-NTO-25HT-1-D+ 5HT-1-A+ DEC-ORANDRADR-A-1EAA-GNMDADOPA-D-25HT-2DOPA-D-25HT-1-ADOPA-D-25HT-2DOPA-D-2ESTR+ ANDR+ DOPA-D-2/D-3-DOPA-D-3+ ADR-B- DOPAADR-A-15HT-2-BDOPAGABA-A+ GABA-A+ GABA-A+ DOPA-D-2+ DOPA-D-2+ ESTR5HT-25HT-25HT-1-A+ HIST-1ANDRBACT5HT-1-DDOPA5HT-1-D5HT-1-A+ 5HT-UHIST-15HT-U5HT-1-D+ ADR-A-1CAR+ ACH- HIST- HIST- PROL- OX-LP-5NMDACHA-K(GIRK)GABA-A+ 5HT-2-A5HT-2-AADR-A-2-ADOPA-D-2/D-3 ESTR+ PR+ OPI-S+ DOPA-U-? ADR-A-2GABA-A5-HA-1-A ADR-A-1 DOPA+/partial HISTACH- 5HT-2-BADR-A+/ANDR+ DOPA-D-2-? DOPA? DOPA-D-2CHA-KESTR+ 5HT-2- PR+ 5HT-2- DOPA+ 5HT-2- DOPA+ 16 Figure S1(Cont) NAME Prednicarbate CNS-1102 Yohimbine Hydrochloride Opipramol Dihydrochloride DCEBIO Cefamandole Sodium (+)-Hydrastine Fusaric Acid MRS-1220 Phenelzine Sulfate R(+)-UH-301 Hydrochloride Phenelzine Sulfate Tranylcypromine Hydrochloride L-750667 Dl-p-Chlorophenylalanine Methyl Ester Hydrochloride (+/-)-Vesamicol Hydrochloride Loratadine 1-(3-Chlorophenyl)Piperazine Dihydrochloride Gedunol 1,3-Diethyl-8-Phenylxanthine Zardaverine Dioxybenzone Ciclopirox Olamine L-703606 Oxalate Oxibendazole Papaverine Hydrochloride Niflumic Acid Cyclopiazonic Acid Tetradecylthioacetic Acid Fenofibrate Clioquinol Spermine Tert-Butyl-Bicyclo[2.2.2]Phosphorothionate Indomethacin Morpholinylamide Dihydrogeduninic Acid, Methyl Ester Chol-11-Enic Acid Diosmetin Syrosingopine Apomorphine Hydrochloride 6-(5H)-Phenanthridinone Lysergol R(-)Apomorphine Hydrochloride Hemihydrate Indole-3-Carbinol Clofibrate Avermectin B1 Thioxolone CGS-12066A Maleate Dihydrocapsaicin Suprofen Methyl Ester Pramoxine Hydrochloride Quipazine Dimaleate Pergolide Methanesulfonate Pergolide Methanesulfonate Fluspirilen CY 208-243 7-Hydroxy-DPAT 1-[1-(2-Benzo[B]Thienyl)Cyclohexyl)]Piperidine BRL 15572 Mexiletine Hydrochloride Adenosine Gitoxin 1-Benzo[B]Thien-2-Yl-N-Cyclopropylmethylcyclohexanamine Tetrac Haloperidol Triflupromazine Hydrochloride Metergoline Imipramine Hydrochloride RX 821002 Hydrochloride CV-3988 Totarol-19-Carboxylic Acid Clozapine Amitriptyline Hydrochloride Norcyclobenzaprine Estradiol Chrysin GW 9662 Chrysene-1,4-Quinone S(-)-3PPP Hydrochloride 1-(2-Methoxyphenyl)-4-(4-Succinimidobutyl)Piperazine WAY-100635 Maleate NAN-190 Hydrobromide Quinazolin-5(6H)-One Analog 5-Methyl-Urapidil Terazosin Hydrochloride Quinacrine Dihydrochloride Quinacrine Dihydrochloride Ajmalicine Hydrochloride RU 24969 Ifenprodil Tartrate Ifenprodil Tartrate ODQ Quinelorane Dihydrochloride WAY-100635 Maleate Salt Buspirone PD 168077 Maleate Dihydroergocristine Methanesulfonate Hycanthone H-89 Nicergoline MK-912 Omeprazole (+/-)-Methoxyverapamil Hydrochloride 2-Methyl-6-(Phenylethynyl)Pyridine Spiroxatrine GR 103691 Droperidol LY 235959 Coralyne Chloride Hydrate Trifluoperazine Hydrochloride Trifluoperazine Dihydrochloride YS-035 Hydrochloride B-HT 920 2,Beta-Dihydroxychalcone Estrone Phenazopyridine Hydrochloride Mesoridazine Reserpine PD 169316 BMY 7378 Dihydrochloride P-MPPF Dihydrochloride (+/-)-Verapamil Hydrochloride Rescinnamin Verapamil Prometryn Cortexolone Maleate Reserpine Nicergoline Dihydroergocristine Risperidone Testosterone Propionate Piribedil Maleate Lisuride Carvedilol Tartrate Risperidone Phloretin Imipramine Hydrochloride Domperidone Maleate Activity 1 Activity 2 Activity3 Activity 4 ARACHEAA-GADR-A-25HT-2CHA-K+ SY-CWGABA-ADOPA-BHADS-A3MAO5HT-1-A+ MAOMAODOPA-D-45HT-SYACH-SYHIST-15HT-1-2+ LIPCOR+ NMDA- IM- OPI-S+ HIST-H-1- DOPA-D-2- ADS-A-1ES-P-C-3UVPERMNK-1NEMOES-P-C-10 SY-PGCHA-CA-iPPAR-A+ PPAR-A+ FUNGEAA-GGABA-ASY-PG- ES-P-C-IV- P450NEURTDOPA+ PARP- GluR+ BACT- DOPA-D-2? 5HT-2-A? CHA-K(A5)5HT-3Nf-kB ATPP-Na/KMICROTUBECOX- AE2- EAA-G+ NMDA- COX-1-2- COMT- TH- DOPA+ COMT- TH- PPAR-A+ GABA-A+ ANC-25HT-1-B+ VAN+ SY-PG- LP-P-A-2+ 5HT-1-D+ COX-1- COX-2- 5HT-2-A/3+ DOPA-D-2+ DOPA-D-2+ DOPA-D-2DOPA-D-1+ DOPA-D-3+ DOPA-D-1-2/4+ DOPA-U5HT-1-DCHA-NAADR-BADS+ ATPP-NA/KDOPA-UTHYR+ DOPA-D-1-2- NMDACHA-KDOPA-D-1/D-1-5HT-2-BACH-M5HT-1-D5HT-2DOPA+ 5HT-UADR-UADS-A-1ADR-A-2PAF5HT-2DOPA-D-25HT-UADR-U5HT-2-APROG+ ESTR+ DIUR+ PPAR-GIL-4BACTDOPA-D-25HT-1-A5HT-1-ADOPA-D-4+ 5HT-1-AADR-A-1ADR-A-1ADR-A-15HT-1-AADR-A-1ACH-M+ Lipase-A-2ACH-M+ Lipase-A-2SY-CW5HT-1-A/2-C+ ADR-A-1EAA-GADR-A-1EAA-GCYC-GUDOPA-D-2/3+ 5HT-1-ADOPA-D-4+ 5HT-1-A+ DOPA-D-2DOPA-D-4+ DOPA-D-2+ ADR-A+/KI-PKAADR-A-1ADR-A-2ATPP-H/KCHA-CAEAA-G5HT-1-ADOPA-D-3DOPA-D-2EAA-GDNADOPA-1-2DOPA-1-2CHA-CADOPA-D-2+ mGluR5DOPA-D-2- ADR- HIST-H-1- SXR+ OX-LP-5OX-LP-5NMDANMDA- CHA-K(GIRK)CHA-K(GIRK)- 5HT-2- ADR-A-2- NMDAADR-1ADR-1- ATPase-KATPase-K- ADR-A-2+ 5HT-3- ESTR+ DOPA-D-2- 5HT-2-A-(indirect?) ADR-(indirect?) NEURTKI-P385HT-1-A+/ADR-A-1-DADR-A-2-C5HT-1-ACHA-CAACECHA-CAHERBGlucoRNEURTADR-A-1DOPA-D-2+ ADR-A+/5HT-2DOPA-D-2- 5HT-2ADR-B- HISTANDR+ ESTR+ DOPA-D-3/D-2+ 5HT-2-A/CDOPA-D-2+ 5HT-2-BADR-BADR-1DOPA-D-2- 5HT-2ADR-B- HISTCHA-CACHA-K-? 5HT-UADR-UADS-A-1DOPA-D-2- 17 Figure S1(Cont) NAME MDL 72832 8-Methoxy-2-Propionamidotetralin Bromocriptine Mesylate N-Methylquipazine 3beta-Chloroandrostanone (-)-Quinpirole GR 127935 Hydrochloride Dioxybenzone Clemizole Hydrochloride Perphenazine Paroxetine Hydrochloride MDL 73005EF p-Iodoclonidine Hydrochloride Ethynylestradiol 3-Methylether Indirubin-3-Oxime ARC 239 Dihydrochloride Prochlorperazine Dimaleate Trazodone Hydrochloride Desipramine Hydrochloride Chloropyramine Hydrochloride Prazosin Hydrochloride Cinanserin Diphenhydramine Hydrochloride Harmane Hydrochloride Trimeprazine Tartrate N-Butyl-N-Ethyl-2-(1-Naphthyloxy)Ethanamine 17alpha-Hydroxyprogesterone Norethynodrel 3-Hydroxyflavone Piperacetazine Zimelidine Dihydrochloride Monohydrate R(+)-6-Bromo-APB Hydrobromide Methoxyverapamil (+/-)-Chloro-APB Hydrobromide Clemizole Hydrochloride SIB 1757 Benfluorex Hydrochloride S-(-)-Eticlopride Hydrochloride 1-[1-(2-Benzo[B]Thienyl)Cyclohexyl]Pyrrolidine Ethinyl Estradiol Chlorpheniramine Maleate 2-[(4-Phenylpiperazin-1Yl)Methyl]2,3-Dihydroimidazo[1,2C]Quinazolin-5(6H)-One 6-Nitroquipazine Scoulerine Dextromethorphan Hydrobromide Monohydrate Perphenazine Verapamil Hydrochloride Vincamine Promazine Hydrochloride NAN-190 L(-)-Vesamicol Hydrochloride (+)-Chlorpheniramine Maleate Fluvoxamine Maleate Zimelidine Dihydrochloride (+/-)-SKF 82958 SKF 83565 Hydrobromide BMY 7378 Dihydrochloride S(-)-UH-301 Hydrochloride Prochlorperazine Dimaleate 6-Nitro-Quipazine Maleate SKF 86466 Quipazine Clovanediol Diacetate GBLD-345 (-)-trans-(1S,2S)-U-50488 Hydrochloride Naftifine Hydrochloride (+/-)-SKF 38393, N-Allyl-, Hydrobromide Dydrogesterone Brinzolamide (+/-)-Brompheniramine Maleate Dyclonine Hydrochloride beta-Caryophyllene Alcohol Biochanin A, Dimethyl Ether Picrotoxinin Estradiol Cypionate Chlorzoxazone Ticlopidine Hydrochloride BIO Iofetamine Hydrochloride 6-Methoxy-1,2,3,4-Tetrahydro-9H-Pyrido[3,4B] Indole Dyclonine Hydrochloride SIB 1757 Enilconazole Pelletierine Hydrochloride Imipramine Hydrochloride Nefopam Hydrochloride S(-)-DS 121 Hydrochloride Hymecromone 3-[2-[4-(2-Methoxyphenyl)Piperazin-1-Yl]Ethyl]-1,5-Dimethylpyrimido[5,4-B]Indole-2,4-Dione Ropinirole Hydrochloride Dipropyl-6,7-ADTN Fluvoxamine Maleate R(-)-SCH-12679 Maleate SCH 23390 Quipazine Maleate YS-035 Prazosin Hydrochloride Clorgyline Hydrochloride Fluoxetine Hydrochloride Tropanyl 3,5-Dimethylbenzoate Metixene Hydrochloride Oxybutynin Chloride 2-Chloroadenosine Strophanthidin Atracurium Besylate Guanabenz Acetate Guanabenz Acetate Guanabenz Acetate Amitraz Arecaidine Propargyl Ester Hydrobromide Methomyl Guanfacine Hydrochloride Clonidine Guanfacine Hydrochloride Guanabenz Acetate Uk 14304 R-(-)-Desmethyldeprenyl Hydrochloride 2,6-Dimethoxyquinone Baicalein Clonidine Hydrochloride Tranylcypromine Sulfate Cinnarizine Thyroxine (-)-Huperzine A Tizanidine Hydrochloride Propachlor Naftopidil Dihydrochloride Amoxapine Physostigmine Sulfate SU 6656 Activity 1 5HT-1-A+ ML+ DOPA-D-2+ 5HT-3+ DOPA-D-2/3+ 5HT-1-B/DUVHIST-1DOPA-D-1-25HT-U5HT-1-A+ ADR-A-2+ PROG+ KI-CDADR-A-2-BDOPA-D-25HT-1-2ADR-UHIST-H-1ADR-A-15HT-25HT-UGABA-A HIST-H-15HT-1-A+ ESTRESTR- Activity 2 CREB+ SSTATIN 5HT-1-D+? ADR-A-1ADR-A-1ESTR+ KI-GSK5HT-1-AADR-A-1ADR-A-15HT-U- HIST-H-1- 5HT-25HT-2+(high 5HT-Udoses) ACH-M- ADR-B- HIST-H-15HT-2-A+ CHA- PR+ PR+ DOPA-D-1/D-2-? 5HT-2-B-? 5HT-UDOPA-D-1+ CHA-CADOPA-D-1+ HIST-1EAA-GmGluR5RED-HMG-? DOPA-D-2/D-3DOPA-UPROG+ ESTR+ 5HT-UADR-UADR-A-15HT-UGABA-A+ ADR-A-1EAA-GNMDADOPA-D-1-2- ADR-A-1CHA-CAADR-A-1CHA-NADOPA-1-2/4- 5HT-2-A/C5HT-1-AADR-A-1ACH-SY5HT-UADR-U5HT-U5HT-UDOPA-D-1+ DOPA-D-2+ DOPA-D-1+ 5HT-1-A+/ADR-A-1-D5HT-1-ADOPA-D-2- ADR-A-15HT-UADR-A-25HT-2-A/3+ GABA-A+ OPI-K+ EPOX-SQDOPA-D-1+ PROG+ ANC-25HT-UCHA-NA- Activity3 Activity 4 ADR-A-1? SXR+ HIST-H-1- ADR-A-1- 5HTOPI-S+ DOPA-U-? ACH-M- ADR-A-1- HIST-H-1- ADR-A-2-CHIST-H-1- 5HT-2- BZD+ FUNG- ADR-U- ESTR+ GABAESTR+ CHA-K-(Ca)P2Y-R-12KI-GSK-3- PLAT-ADKI-PDK1- MAOCHA-NAEAA-GSY-CW- mGluR5FUNG- HIST-H-1- GLY-RESTR+ 5HT-U5HT-UDOPA-D-3- ADR-UDOPA-U- ADR-A-1+ DOPA-D-3/2+ DOPA-D-2+ 5HT-UDOPA-D-1DOPA-D-15HT-2-A/3+ CHA-CAADR-A-1MAO-A5HT-U5HT-3ACH-MACH-MADS+ ATPP-Na/KACH-N/MADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ACH-M-2+ ACHADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ MAO-BBACTPO-RDNAADR-A-2+ MAOCHA-CATHYR+ ES-ACHADR-A-2+ HERBADR-A-1ADR-UES-ACHKI-SRC- 5HT ADS-A-1ADR-U- COX- INSECT- DOPA-D-2? HIST-H-1- 5HT-2-A? DOPA-D-2-ACH-M- ADR-U-? 5HT-U- 5HT-2-? 18 Cluster # S.D. Waking Activity Rest Total # Rest Bouts Rest Bout Length Rest Latency Activity Total Hierarchical Clustering -3 -2 -1 0 1 2 3 Waking Activity Rest Total # Rest Bouts Rest Bout Length Rest Latency Activity Total Figure S2 K-Means Clustering (k=24) 1 2 3 4 5 6 7 8-9 10 11 12 13 14 15 16 17 18 24 | 19 Waking Activity Rest Latency Activity Total # Rest Bouts Rest Bout Length Rest Total Figure S3 NAME 1 2 3 4 5 6 7 Activity 1 Activity 2 Activity3 Activity 4 SB 206553 Hydrochloride Fenoterol Hydrobromide Clenbuterol Hydrochloride Maprotiline Hydrochloride Maprotiline Hydrochloride Retinoic Acid p-Hydroxyanilide Betamethasone Prednicarbate Budesonide Diclofenac Sodium Monobenzone Spectinomycin Hydrochloride Sulfaguanidine Benzyl Penicillin Potassium Physcion Leflunomide Estrone Acetate I-OMe-Tyrphostin AG 538 (-)-Eseroline Fumarate Kynurenine Chlorophyllide Cu Complex Na Salt Enoxolone Chlorthalidone Dinitolmide SU 6656 Physostigmine sulfate 5-beta-12-Methoxy-4,4-Bisnor-8,11,13-Podocarpatrien-3-one 14-Methoxy-4,4-Bisnor-8,11,13-Podocarpatrien-3-one 3-beta-Acetoxydeoxodihydrogedunin 11-alpha-Acetoxykhivorin Carbenoxolone Sodium Glycine Senecrassidol 6-Acetate 5HT-2-B/CADR-B+ ADR-B-2+ ADR-UADR-UAPOP+ ARACHARACHARACHARACHSY-PGBACTBACTBACTBACTDH-HYOESTR+ KI-IGF-1OPI-M+ Cisapride Tegaserod Maleate Ethylene Glycol-Bis(2-Aminoethylether)-N,N,N,N-Tetraacetic Acid Benztropine MG-624 (+)-Tubocurarine Chloride Pancuronium Bromide Mecamylamine Hydrochloride (-)-Nicotine Nicotine Ditartrate 1-Benzyl-1-Methyl-4-Cyclopentylmethoxycarbonylpiperidinium Br Chloroethylclonidine Dihydrochloride Bretylium Tosylate Bopindolol Malonate Desoxycorticosterone Acetate Flunisolide Clobetasol Propionate Hydrocortisone 6alpha-Methylprednisolone Betamethasone Valerate Clobetasol Propionate Ursolic Acid Dexamethasone Medrysone Betamethasone Flumethasone Cefoxitin Sodium Salt Mefloquine Hydrochloride Tetrandrine Flecanide Benzamil Hydrochloride Pentamidine Isethionate Fenoldopam Propentofylline Diplosalsalate Fosfosal SKF 94836 Ro 20-1724 Papaverine Hydrochloride Equilin Allopregnanolone Valproate Sodium Atrazine Diphenylpyraline Hydrochloride Cyclosporin A Austricine 2-Cyclooctyl-2-Hydroxyethylamine Hydrochloride Theaflavin Digallate Finasteride Bufexamac Diflunisal Fenoprofen Fenoprofen Calcium Salt Dihydrate Piroxicam Capsazepine 5-Aminopentanoic Acid Hydrochloride Catechin Tetramethylether Tetrahydrotrimethylhispidin Aminophenazone Oxethazaine Sinapic Acid Methyl Ether IEM-1460 6,7-Dichloroquinoxaline-2,3-Dione 7-Chlorokynurenic Acid SDZ 220-581 L-689560 5HT-4+ 5HT-4+ ACE-2ACH-MACH-NACH-NACH-NACH-NACH-N+ ACH-N+ ACH-TADR-A-1ADR-BADR-B-1COR-M+ ARACHARACHARACHARACHARACHARACHARACHARACHARACHARACHARACHSY-CWCALMCHA-CACHA-NACHA-NA-CaDNADOPA-D-1-A+ ES-P-CES-P-C-? ES-P-CES-P-C-3ES-P-C-4ES-P-C-4ESTR+ GABA-A+ HDACHERBHIST-H-1IMLP-P-A-2NEURTNf-kB-? RED-5ASY-PGSY-PGSY-PGSY-PGSY-PGVAN- ACH+(indirect) 5HT-2-BCHEL+ DOPA-U- CHA-K- ACH+ 5HT-3- COXCOXCOXCOXCOXCHA-Na+ OX-C- EAA-GEAA-GEAA-GEAA-GEAA-G- AMPA-RNMDANMDANMDANMDA- NMDA- (-)-MK-801Hydrogen Maleate L-701324 L-701324 L-701324 Dizocilpine Maleate (+)-MK-801 Spiperone Azobenzene EAA-GEAA-GEAA-GEAA-GEAA-GEAA-GDOPA-D-2- NMDANMDANMDANMDANMDANMDA5HT-1-A- SB 228357 R(-)-Isoproterenol (+)-Bitartrate Amitryptiline Hydrochloride Amoxapine Telmisartan Cefamandole Sodium TCPOBOP Cinnarazine Psora-4 Pimozide Mitotane Oxiconazole Nitrate Ornithine alpha-Ketoglutarate 5HT-2-B/CADR-B-2+ ADR-UADR-UANG-2-1SY-CW CAR+ CHA-CACHA-KDOPA-D-2ESTRFUNG- N-Desmethylclozapine Coumaphos S,S,S,-Tributylphosphorotrithioate Fiduxosin Hydrochloride Mianserine Hydrochloride Bepridil Hydrochloride Aconitine Loxapine Succinate Ibudilast Endosulfan Clorgyline Hydrochloride 5HT-2-CACHACHADR-A-1ADR-UCHA-CACHA-NA+ DOPA-D-1ES-P-C-4GABA-AMAO-A- ACH-M1+ Amoxapine ODQ L-701252 Megestrol Acetate 1S,9R-Hydrastine Chlordane Dacthal Propazine 7-Oxocallitrisic Acid, Methyl Ester ADR-UCYC-GUEAA-GESTR+ GABA-AGABA-AHERBHERB- 5HT-U- INSECT- ATPP-Ca/MgATPP-Na/K- Methiothepin Maleate Mianserin Cyproterone Acetate (1S,9R)-Beta-Hydrastine Pregnenolone Astemizole Bromo-3-Hydroxy-4-(Succin-2-Yl)-Caryolane Gamma-Lactone 5HT-1-2ADR-UANDRGABA-AGABA-AHIST-1- DOPA-D-2ADR-A-2- HIST- 5HT-U-(weak) 5HT-U-(weak) LIPCOR+ LIPCOR+ LIPCOR+ IMIM- KI-GFPL- ALOX5- GluR+ GluR+ ACH-(weak) DIUR+ KI-SRCES-ACH- NMDA+ HIST- ADR-A-2+ NA/K-ATPaseMR+ LIPCOR+ LIPCOR+ LIPCOR+ LIPCOR+ LIPCOR+ LIPCOR+ LIPCOR+ LIPCOR+ LIPCOR+ LIPCOR+ LIPCOR+ BACT- IMIMIMIMIMIMIMIMIMIMIM- GluR+ GluR+ GluR+ GluR+ GluR+ GluR+ GluR+ GluR+ GluR+ GluR+ GluR+ CHA-K-(Ca+) ADR-A-2+ ADS-/+ CHA-CAGABA+ PNMT- ADR-B-1+ 5HT-U5HT-UPPAR-G+ BACT- 5HT-2-A- CHA-K- HIST-H-1- DOPA-D-2- ACH-M- 5HT-2-ACHA-NA? ADR-A-1- DOPA-U- ADR-A-2CHA-NA- HISTCHA-K- 5HT-2-A/2-C- DOPA-D-2- 5HT-2- (indirect?) NMDAPROG+ 5HT-2-A/2-C- CHA-K- 20 8 9 10 11 Waking Activity Rest Latency Activity Total # Rest Bouts Rest Bout Length Rest Total Figure S3(Cont) Activity 1 Activity 2 Activity3 Activity 4 Dichlorodiphenyltrichloroethane Methoxychlor Strobane Toxaphene Aldrin Heptachlor NAME CHA-NA+ CHA-NA+ CHA-NA+ CHA-NA+ GABA-AGABA-A- INSECTINSECTINSECTINSECTINSECTINSECT- ATPP-Ca/Mg- ATPP-Na/KATPP-Ca/Mg- ATPP-Na/K- Disulfoton (+)-Hydrastine ACHGABA-A- INSECT- Dihydroergotamine Mesylate Amperozide Hydrochloride Clozapine Cephaeline Dihydrochloride Heptahydrate Chlormadinone Acetate Flutamide Halofantrine Hydrochloride Haloperidol Chlorpromazine Hydrochloride 3-alpha-Bis-(4-Fluorophenyl)Methoxytropane (-)-MK-801 Hydrogen Maleate Spermine Tetrahydrochloride Epiandrosterone CGP-13501 2-Methoxyestradiol Deptropine Citrate Astemizole Astemizole Clemastine Oxatomide Promethazine Hydrochloride Terfenadine 3-(1H-Imidazol-4-Yl)Propyl Di(P-Fluorophenyl)Methyl Ether Tyrphostin AG 494 Danazol 1,4-PBIT Dihydrobromide Roxithromycin Finasteride Menadione 2,4-Dihydroxychalcone 4-Glucoside Benzanthrone Derrusnin Hexylresorcinol Homopterocarpin 5HT-1-D+ 5HT-25HT-25HT-4+? ANDRANDRCHA-KDOPA-D-1-2DOPA-D-2DOPA-UEAA-GEAA-GESTRGABA-B+ HIF-1HISTHIST-1HIST-1HIST-1HIST-1HIST-1HIST-1HIST-H3-/+ KI-GFEPLHRHNO-SPRT-50SRED-5AVITA+ 5HT-1-A+ DOPA-D-2DOPA-D-2- ADR-A-2-A DOPA-D-2/D-3 ADR- HIST-H-1- ESTR+ PR+ NMDADOPA-D-1ACH-MNMDAEAA-G+ CHA-CA- CHA-K5HT1-2- MDL 72832 Metergoline Phenylmethyl Ester Metergoline GR 4661 LY-367265 R(+)-Terguride LY-53857 Imipramine Hydrochloride R-(-)-Fluoxetine Hydrochloride Naftopidil Dihydrochloride Naftopidil Dihydrochloride Vincamine Oxymetazoline Hydrochloride Yohimbine Hydrochloride Beclomethasone Dipropionate Rutilantinone Verapamil Hydrochloride Acetopromazine Maleate Salt Azaperone Triflupromazine Hydrochloride Haloperidol L-741626 Thioridazine Hydrochloride Mesulergine Hydrochloride CNS-1102 trans-Dehydroandrosterone Tolnaftate SB 205384 5HT-1-A+ 5HT-1-D5HT-1-D5HT-1-D+ 5HT-2-A5HT-2-B5HT-25HT-U5HT-UADR-A-1ADR-A-1ADR-A-1ADR-A-1+ ADR-A-2ARACHBACTCHA-CADOPADOPADOPA-D-1/D-1DOPA-D-1-2DOPA-D-2DOPA-D-2DOPA-D-2+ EAA-GESTR+ FUNGGABA-A+ GABA-A+ HERBHISTHISTHISTHIST-1HIST-1KI-CLKKI-TYROPI-DTRP-M8+ ADR-A-1? 5HT-25HT-2- LY-165163 BP554 Metergoline Dihydroergotamine Methanesulfonate Ketanserin Tartrate Pirenperone Ketanserin Tartrate Paroxetine Hydrochloride Hemihydrate Trihexyphenidyl Hydrochloride Quinacrine Hydrochloride Pancuronium Bromide Doxazosin Mesylate WB-4101 Hydrochloride Ifenprodil Tartrate Nicergoline 3,4-Dimethoxyflavone Androsterone Acetate Totarol Phenamil Azaperone Spiperone Hydrochloride Benperidol Spiperone Droperidol DO 897/99 Risperidone S(-)-Lisuride Dihydroergocristine Dihydroergocristine Bromocriptine Mesylate PD 168077 Ro 25-6981 Hydrochloride Butylparaben Hydroxyprogesterone Caproate Alfadolone Acetate Reserpine Saquinavir Mesylate Nomegestrol Acetate Ethynodiol Diacetate Oxaprozin 5HT-1-A+ 5HT-1-A+ 5HT-1-D5HT-1-D+ 5HT-25HT-25HT-25HT-UACH-M-1ACH-M+ ACH-NADR-A-1ADR-A-1ADR-A-1ADR-A-1AHRANDR+ BACTCHA-NADOPADOPA-D-2DOPA-D-2DOPA-D-2DOPA-D-2DOPA-D-2/D-3DOPA-D-2DOPA-D-2+ DOPA-D-2+ DOPA-D-2+ DOPA-D-2+ DOPA-D-4+ EAA-GESTR? ESTR+ GABA-A+ NEURTPROTPROG+ PROG+ SY-PG- DOPA-D-2- Spiroxatrine AMI-193 AMI-193 WB-4101 Hydrochloride Amoxapine 8-Cyclopentyl-1,3-Dipropylxanthine Strophanthidinic Acid Lactone Acetate Vinpocetine Medroxyprogesterone Acetate Domperidone 3-Methoxymorphinan Hydrochloride L-701252 4-Androstene-3,17-Dione Tracazolate Hydrochloride Loperamide BWB70C 5HT-1-A5HT-25HT-2ADR-A-1ADR-UADS-A-1ATPP-Na/KCHA-NADEC-ORDOPA-D-2EAA-GEAA-GESTRGABA-AOPI+ OX-LP-5- 3-Methyl-6-(3-[Trifluoromethyl]Phenyl)-1,2,4-Triazolo[4,3-B]Pyridazine Prometryn Meclozine Dihydrochloride Meclizine Hydrochloride 1-[(4-Chlorophenyl)Phenyl-Methyl]-4-Methylpiperazine Methapyrilene Hydrochloride Terfenadine TG 003 Nicolsamide Naltriben Methanesulfonate Icilin Niloticin Triptophenolide 12 13 HIST-H-1- NMDAGABA-A+ ACH-MCHA-KCHA-KACH-M-? ACH-MCHA-K- 5HT-2- calmodulin- ESTRNF-kBANDR- DOPA+ DOPA+ 5HT-UDOPA+/partial ADR-U- ADS-A-1- ADR-U-? ADR-U-? CHA-NAADR-A-2+ 5HT-2-? 5HT-2-? LIPCOR+ IM- HIST5HT-2-BNMDA- ACHACH-MCHA-K- 5HT-25HT-2-CNMDAANDR+ ADR- GluR+ CHA-K- GABA-A- ACHACH- CHA-K- 5HT-25HT-1-A+ DOPA? DOPA-D-2-? DOPA? DOPA+ ADR-A-2-A Lipase-A-2- OX-LP-5- EAA-G- NMDA- DOPA-D-2/D-3 CHA-K(GIRK)- CHA-CA-? HIST5HT-1-ACHA-K5HT-1-ACHA-KDOPA-D-3+ 5HT-25HT-2-BADR-A+/ADR-A+/CREB+ ACH5HT-2-A5HT-2-A5-HA-1-A ADR-B- ADR-A-1 HIST- 5HT-25HT-2SSTATIN NMDA-NR2-BESTR+ PR+ TNF-alpha+ ANDRESTR+ COX- PROL- DOPA-D-2DOPA-D-2DOPA-D-2- ADR-A-2- 5HT-U- ES-P-C-1ANDRNMDANMDAANDR+ GABA-A+ ESTR+ PR+ OPI-S+ DOPA-U-? 21 Waking Activity Rest Latency Activity Total # Rest Bouts Rest Bout Length Rest Total Figure S3(Cont) NAME 14 Activity 1 1-(2-Methoxyphenyl)-4-(4-Succinimidobutyl)Piperazine Spiroxatrine WAY-100635 Maleate Salt RU-24969 CINANSERIN Opipramol Dihydrochloride Norcyclobenzaprine Alcuronium Chloride Quinacrine Dihydrochloride Quinacrine Dihydrochloride Dihydrate Pancuronium Bromide 5HT-1-A5HT-1-A5HT-1-A5HT-1-A/2-C+ 5HT-25HT-25HT-2-AACH-MACH-M+ ACH-M+ ACH-N2-[4-(2-Methoxyphenol)Piperazin-1-Yl]Methyl-6-Methyl2,3Dihydroimidazo[1,2C]Quinazolin-5(6H)One ADR-A-1ADR-A-12-[[B-(4-Hydroxyphenol)Ethyl]Aminoethyl]-1-Tetralone ADR-A-1Doxazosin Mesylate ADR-A-1Ifenprodil Tartrate ADR-A-1Ifenprodil Tartrate ADR-A-1L-765314 ADR-A-1Nicergoline ADR-A-1Prazosin ADR-A-15-Methyl-Urapidil ADR-A-2MK-912 ADR-A-2RX 821002 Hydrochloride ANDR+ Testosterone Propionate APOPCepharanthine ATPP-H/KOmeprazole ATPP-NA/KGitoxin CHA-CA(+/-)-Methoxyverapamil Hydrochloride CHA-NAMexiletine Hydrochloride CYC-GUODQ DNACoralyne Chloride Hydrate DOPA-BHFusaric Acid DOPA-D-2Domperidone Maleate DOPA-D-2Droperidol DOPA-D-2Risperidone DOPA-D-2+ Dihydroergocristine Methanesulfonate DOPA-D-3GR 103691 DOPA-U1-Benzo[B]Thien-2-Yl-N-Cyclopropylmethylcyclohexanamine EAA-G2-Methyl-6-(Phenylethynyl)Pyridine EAA-GLY-235959 ES-P-C3-Isobutyl-1-Methylxanthine ES-P-C-4Papaverine Hydrochloride SY-CWAjmalicine Hydrochloride TO-2Amsacrine hydrochloride Activity 2 Activity3 Activity 4 DOPA-D-2DOPA-D-4+ ADR-A-2- OPI-S+ HIST-H-1- Lipase-A-2Lipase-A-2- OX-LP-5OX-LP-5- EAA-GEAA-G- NMDANMDA- DOPA-D-2- CHA-K(GIRK)CHA-K(GIRK)- 5HT-1-A- ESTR+ NF-KB- IM- ADR-B- 5HT-2ADR-A+/- ADR-B5HT-2- HIST- mGluR5NMDAADS- Amodiaquine Dihydrochloride Hycanthone 15 Trazodone Hydrochloride P-MPPF Dihydrochloride WAY-100635 Maleate MDL-73005EF BMY 7378 Dihydrochloride GR 127935 Hydrochloride Clozapine N-Methylquipazine (+)-Chlorpheniramine Maleate Diphenhydramine Hydrochloride Fluvoxamine Maleate Imipramine Hydrochloride Paroxetine Hydrochloride Zimelidine Dihydrochloride Monohydrate Prazosin Hydrochloride Terazosin Hydrochloride Vincamine 5HT-1-25HT-1-A5HT-1-A5HT-1-A+ 5HT-1-A+/5HT-1-B/D5HT-25HT-3+ 5HT-U5HT-U5HT-U5HT-U5HT-U5HT-UADR-A-1ADR-A-1ADR-A-13-[2-[4-(2-Methoxyphenyl)Piperazin-1-Yl]Ethyl]-1,5Dimethylpyrimido[5,4-B]Indole-2,4-Dione ADR-A-1+ ADR-A-2+ p-Iodoclonidine Hydrochloride ADR-A-2-BARC 239 Dihydrochloride ADR-BCarvedilol Tartrate ADR-UDesipramine Hydrochloride CHA-CA(+/-)-Verapamil Hydrochloride CHA-CAMethoxyverapamil CHA-CAPhloretin CHA-CAVerapamil Hydrochloride CHA-CAYS-035 CHA-CAYS-035 Hydrochloride DOPA+ Apomorphine Hydrochloride DOPA-1-2Trifluoperazine Dihydrochloride DOPA-1-2Trifluoperazine Hydrochloride DOPA-D-1/D-2-? Piperacetazine DOPA-D-1+ (+/-)-SKF 38393, N-Allyl-, Hydrobromide DOPA-D-1-2Perphenazine DOPA-D-1-2Perphenazine DOPA-D-2Mesoridazine DOPA-D-2Prochlorperazine Dimaleate DOPA-D-2Risperidone Quinelorane Dihydrochloride DOPA-D-2/3+ S(-)-Lisuride DOPA-D-2+ DOPA-D-2+ B-HT 920 DOPA-D-2+ Dipropyl-6,7-ADTN Piribedil Maleate DOPA-D-3/D-2+ 17alpha-Hydroxyprogesterone ESTRESTRNorethynodrel ESTR+ Estrone GABA-A Harmane Hydrochloride GABA-A+ Scoulerine GlucoRCortexolone Maleate Clemizole Hydrochloride HIST-1HIST-H-1Chloropyramine Hydrochloride Indirubin-3-Oxime KI-CDKI-P38PD 169316 KI-PKAH-89 NEURTReserpine P450Diosmetin PPAR-GGW 9662 PROG+ Ethynylestradiol 3-Methylether UVDioxybenzone ADR-A-1- 5HT-2+(high doses) 5HT-U- DOPA-D-4+ ADR-A-1ADR-A-1-D5HT-1-D+? DOPA-D-2- ADR-A-2-C- 1-(3-Chlorophenyl)Piperazine Dihydrochloride NAN-190 S(-)-UH-301 Hydrochloride Buspirone R(+)-UH-301 Hydrochloride BMY 7378 Dihydrochloride Quipazine Quipazine Dimaleate Dl-p-Chlorophenylalanine Methyl Ester Hydrochloride 6-Nitroquipazine Chlorpheniramine Maleate Fluvoxamine Maleate 6-Nitroquipazine Maleate Zimelidine Dihydrochloride Rescinnamin L(-)-Vesamicol Hydrochloride 5HT-3ADR-A-1- ADR- ADR-UHIST-H-1- HIST-H-1- ADR-U- ADS-A-1- HIST-H-1- CHA-NA5HT 5HT-1-AADR-15HT-U- ACH-M- ADR-B- CHA-K-? COMTADR-1ADR-15HT-2-B-? THATPase-KATPase-K- ADR-A-1ADR-A-15HT-2-A-(indirect?)ADR-(indirect?) ADR-A-1HIST-H-15HT-25HT-2ADR-BHIST5HT-2-BADR-A-2+ 5HT-3- 5HT-2-A/CPR+ PR+ 5HT-2-A+ ADR-A-1- CHAADR-A-1- 5HT- KI-GSK- IL-4ESTR+ 2beta-Dihydroxychalcone 3-Hydroxyflavone Phenazopyridine Hydrochloride Totarol-19-Carboxylic Acid 16 2-[(4-Phenylpiperazin-1-Yl)Methyl]-2,3-Dihydroimidazo[1,2-C]Quinazolin-5(6H)-One SKF 86466 Verapamil Promazine Hydrochloride (+/-)-Chloro-APB Hydrobromide (+/-)-SKF 82958 R(+)-6-Bromo-APB Hydrobromide SKF 83565 Hydrobromide Prochlorperazine Dimaleate S-(-)-Eticlopride Hydrochloride L-750667 PD 168077 Maleate 1-[1-(2-Benzo[B]Thienyl)Cyclohexyl]Pyrrolidine Dextromethorphan Hydrobromide Monohydrate SIB 1757 Syrosingopine 6(5H)-Phenanthridinone Ethinyl Estradiol Benfluorex Hydrochloride Suprofen Methyl Ester Dihydrogeduninic Acid, Methyl Ester 5HT-1-2+ 5HT-1-A5HT-1-A5HT-1-A+ 5HT-1-A+ 5HT-1-A+/5HT-2-A/3+ 5HT-2-A/3+ 5HT-SY5HT-U5HT-U5HT-U5HT-U5HT-UACEACH-SYADR-A-1ADR-A-2CHA-CADOPA-1-2/4DOPA-D-1+ DOPA-D-1+ DOPA-D-1+ DOPA-D-1+ DOPA-D-2DOPA-D-2/D-3DOPA-D-4DOPA-D-4+ DOPA-UEAA-GEAA-GNEURTPARPPROG+ RED-HMG-? SY-PG- DOPA-D-2ADR-A-1-D- ADR-A-2-C- ADR-U- HIST-H-1- 5HT-2-A/C- ACH-M- ADR-A-1- ADR-A-1- HIST-H-1- 5HT-2- NMDAmGluR5- OPI-S+ DOPA-U-? ESTR+ SXR+ COX-1- COX-2- DOPA-D-2+ 22 Waking Activity Rest Latency Activity Total # Rest Bouts Rest Bout Length Rest Total Figure S3(Cont) NAME 17 18 19 20 21 22 23 24 Activity 1 NAN-190 Hydrobromide N-Butyl-N-Ethyl-2-(1-Naphthyloxy)Ethanamine CGS-12066A Maleate Quipazine Maleate Tropanyl 3,5-Dimethylbenzoate (+/-)-Brompheniramine Maleate Amitriptyline Hydrochloride Fluoxetine Hydrochloride Imipramine Hydrochloride Nefopam Hydrochloride Methomyl Metixene Hydrochloride Oxybutynin Chloride Arecaidine Propargyl Ester Hydrobromide Atracurium Besylate Prazosin Hydrochloride Amitraz Clonidine Clonidine Guanabenz Acetate Guanabenz Acetate Guanabenz Acetate Guanabenz Acetate Guanfacine Hydrochloride Guanfacine Hydrochloride Tizanidine Hydrochloride UK 14304 2-Chloroadenosine Adenosine MRS-1220 Brinzolamide Strophanthidin 2,6-Dimethoxyquinone Chrysene-1,4-Quinone Cinnarizine Chlorzoxazone Dyclonine Hydrochloride Dyclonine Hydrochloride Chrysin R(-)-SCH-12679 Maleate SCH 23390 S(-)-3PPP hydrochloride (-)-Quinpirole Bromocriptine Mesylate S(-)-DS 121 Hydrochloride Ropinirole Hydrochloride SIB 1757 Naftifine Hydrochloride (-)-Huperzine A Biochanin A, Dimethyl Ether Estradiol Cypionate Picrotoxinin GBLD-345 Propachlor Clemizole Hydrochloride Trimeprazine Tartrate BIO 6-Methoxy-1,2,3,4-Tetrahydro-9H-Pyrido[3,4B] Indole Phenelzine sulfate Phenelzine Sulfate Tranylcypromine Hydrochloride Tranylcypromine Sulfate Clorgyline Hydrochloride R-(-)-Desmethyldeprenyl Hydrochloride 8-Methoxy-2-Propionamidotetralin (-)-trans-(1S,2S)-U-50488 Hydrochloride Ticlopidine Hydrochloride CY-3988 Baicalein Dydrogesterone Estradiol Enilconazole Tetrac Thyroxine 3beta-Chloroandrostanone beta-Caryophyllene Alcohol Clovanediol Diacetate Hymecromone Iofetamine hydrochloride Pelletierine Hydrochloride Pramoxine Hydrochloride 5HT-1-A5HT-1-A+ 5HT-1-B+ 5HT-2-A/3+ 5HT-35HT-U5HT-U5HT-U5HT-U5HT-UACHACH-MACH-MACH-M-2+ ACH-N/MADR-A-1ADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ADR-A-2+ ADS+ ADS+ ADS-A3ANC-2ATPP-Na/KBACTBACTCHA-CACHA-K-(Ca)CHA-NACHA-NADIUR+ DOPA-D-1DOPA-D-1DOPA-D-2DOPA-D-2/3+ DOPA-D-2+ DOPA-D-3DOPA-D-3/2+ EAA-GEPOX-SQES-ACHESTR+ ESTR+ GABAGABA-A+ HERBHIST-1HIST-H-1KI-GSK-3MAOMAOMAOMAOMAOMAO-AMAO-BML+ OPI-K+ P2Y-R-12PAFPO-RDNAPROG+ PROG+ SY-CWTHYR+ THYR+ Fluspirilen Pergolide Methanesulfonate DOPA-D-2DOPA-D-2+ BRL 15572 CY 208-243 Pergolide Methanesulfonate 7-Hydroxy-DPAT 1-[1-(2-Benzo[B]Thienyl)Cyclohexyl)]Piperidine Dihydrocapsaicin 5HT-1-DDOPA-D-1+ DOPA-D-2+ DOPA-D-3+ DOPA-UVAN+ Clioquinol FUNG- Cyclopiazonic Acid Papaverine Hydrochloride Tert-Butyl-Bicyclo[2.2.2]Phosphorothionate Oxibendazole Indomethacin Morpholinylamide CHA-CA-iES-P-C-10 GABA-ANEMOSY-PG- (+/-)-Vesamicol Hydrochloride 1,3-Diethyl-8-Phenylxanthine Ciclopirox Olamine DCEBIO Spermine Zardaverine Loratadine L-703606 Oxalate Fenofibrate Tetradecylthioacetic acid Niflumic Acid Dioxybenzone Gedunol ACH-SYADS-A-1PERMCHA-K+ EAA-GES-P-C-3HIST-1NK-1PPAR-A+ PPAR-A+ SY-PGUV- Thioxolone R(-)Apomorphine Hydrochloride Hemihydrate Avermectin B1 Clofibrate Indole-3-Carbinol Lysergol ANC-2DOPA+ GABA-A+ PPAR-A+ Activity 2 Activity3 Activity 4 ADR-A-15HT-1-D+ ADR-UADR-U- HIST-H-1- ADR-UDOPA-UINSECT- ADS-A-1ADR-U- COX- HIST-H-1- DOPA-D-2- ACH-M- CREB+ SSTATIN mGluR5FUNG- ESTR+ GLY-RBZD+ KI-PDK1- DOPA-D-2? DOPA-D-2? 5HT-2-A? 5HT-2-A? PLAT-AD- ESTR+ FUNG- SXR+ DOPA-D-1-2/4+ MICROTUBECOX-1-2- ES-P-C-IVATPP-Na/K- Nf-kB EAA-G+ NMDA- CHA-K(A5)- COX- AE2- COMT- TH- LP-P-A-2+ Chol-11-Enic Acid 23 Correlation Matrix NAN190 NAN190 3 S.D. 2 2 1 1 3 0 0 4 -1 -2 -3 S.D. -1 -2 -3 4 5 4 5 6 -0.5 -0.5 0.15 3 1.5 2 0.45 1 betamethasone 1 betamethasone 3 1 45 15 0 4.5 2 2 1 3 0 4 -1 -2 -3 S.D. 1 1 correlation 3 S.D. 2 1 2 0.5 0.5 3 -1 5 -2 6 15 µM 45 15 4.5 1.5 0.45 0.15 -3 20 1.5 4 0 0 0.45 5 0.15 3 4 5 -0.5 -0.5 6 0.15 2 0.45 1 4.5 1.5 µM 45 15 waking activity activity total 6 rest latency # rest bouts 10 rest bout length 5 ropinirole ropinirole 3 3 S.D. 2 1 1 1 45 15 0 0 4.5 3 2 3 4 -1 1 1 2 0.5 0.5 -1 4 5 0.15 6 0 0 1 2 3 4 5 6 -0.5 -0.5 0.15 µM 0.45 clonidine correlation stablity clonidine-dosestable 3 3 S.D. 2 1 1 1 45 15 0 0 4.5 3 1.5 4 0.45 5 0.15 6 2 2 3 4 -1 1 1 correlation waking activity 1.5 0.45 1.5 -3 S.D. -3 20 activity total 15 rest latency # rest bouts µM 45 15 4.5 1.5 0.45 0.15 10 rest bout length rest total 5 4.5 -2 -2 6 45 15 5 1 2 0.5 0.5 -1 3 1 1 0 0 4.5 3 0.5 0.5 4 5 0.15 6 -0.5 -0.5 1 2 0.5 0.5 3 1.5 4 0.45 5 0.15 6 0 1 2 3 4 5 6 0 -0.5 -0.5 0.15 µM 0.45 waking activity activity total rest latency rest bout length rest total # rest bouts -3-3 S.D. 4.5 1.5 -2-2 20 6 1 4.5 0 -1-1 15 5 1 45 15 45 15 11 10 4 pergolide 3 S.D. 22 0 3 0.15 2 0.45 1 1.5 µM 3 0 0 correlation 1.5 0.45 4.5 waking activity 20 activity total rest latency rest bout length rest total # rest bouts 15 -3-3 S.D. 1 2 pergolide 5 6 1 45 15 -2-2 µM 45 45 15 15 4.5 4.5 1.5 1.5 0.45 0.45 0.15 0.15 5 1 45 15 -1-1 10 4 correlation 2 0.15 waking activity 1 buspirone 3 S.D. 2 2 5 -0.5 -0.5 µM 3 45 45 15 15 4.5 4.5 1.5 1.5 0.45 0.45 0.15 0.15 0 0 0.45 -3 S.D. -3 20 activity total 15 rest latency 10 rest bout length rest total # rest bouts 5 4.5 1.5 -2 -2 6 45 15 5 buspirone Buspirone 0 0 0.45 6 2 Ropinirole 0.5 0.5 3 µM 1 Clonidine 2 4.5 1.5 0.15 waking activity 20 activity total 15 rest latency 10 rest bout length rest total µM 45 15 4.5 1.5 0.45 0.15 # rest bouts 5 1 4.5 6 45 15 45 15 5 rest total Betamethasone NAN-190 2 Pergolide 1 1 3 1 correlation Fingerprint µM 45 15 4.5 1.5 0.45 0.15 correlation Figure S4 24 ADR-BADR-B+ ADR-U- 3 3 10 5HT-1D5HT-1D+ 4 3 NEURO- 4 HIST-H1- 8 CHA-NACHA-NA+ PPAR-A+ 5 3 CHA-CA-L8 6 ACH-N+ ACH-SY- 7 2 2 ACH-N- 3 >=1 target 2 ACH-MACH-M+ 7 ACH-ES-Rev 1 3 0 targets 3 ACH-ES-IRev NMDA- 3 18 ADSmGLUR5- 2 1 ADS+ 2 2 Correlation 5 9HIST-H1-(ERG) GABA- 3 3 GABA+ DOPA-U- 2 4 8 DOPA-D4+ 3 0 Targets Shared >=1 Target Shared 9 DOPA-D3- DOPA-D2+ 12 DOPA-D3+ DOPA-D2/3- 0.8 2 DOPA-D2/3+ 2 DOPA-D2- 24 0.6 2 DOPA-D1DOPA-D1+ 7 0.4 8 0.2 DOPA- MAO- 8 0 DOPA+ 5HT-4+ 3 Correlation 2 5HT-2B/C- 2 Percent 6 3 5HT-2/3+ -0.2 3 5HT-2- 5HT-1A+/- 2 -0.4 13 5HT-1A5HT-1A+ 7 -0.6 9 SSRI ADR-A2+ 12 C. -0.8 SNRI ADR-A2- 4 0 -1 10 ADR-A1- 24 Correlation A. 8 Class N Figure S5 B. 1 0.8 0.6 0.4 0.2 0 -0.2 -0.4 -0.6 -0.8 -1 repeats (2 sources) 3 1 1 0.5 0 -0.5 25 Figure S6 A. Waking Activity Rest Average Waking Activity ,3584,6-Nitroquipazine 3 SSRIs 3.5 Normalized Sleep/10 minutes Normalized Waking Activity N+ 4 2.5 6-nitroquipazine O Sleep,3584,6-Nitroquipazine 4 3 2 2 1.5 1 1 3 2.5 2 2 N 1.5 1 1 0.5 0 0 0 5 3 10 15 20 25 30 35 Experimental Time (Hours) 40 45 0 50 Average Waking Activity ,1552,*(D)Zimelidine Dihydrochloride Normalized Sleep/10 minutes Normalized Rest 2 2 1.5 1 1 0.5 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Average Waking Activity ,491,(+)-Chlorpheniramine Maleate 3 3 2.5 2 2 1.5 1 1 0.5 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Br Sleep,1552,*(D)Zimelidine Dihydrochloride 3 N 3 2.5 2 2 1.5 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 N 50 Sleep,491,(+)-Chlorpheniramine Maleate 4 4 Cl 3.5 N 3 3 2.5 2 2 1.5 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 0 0 50 0 5 10 Average Waking Activity ,666,Fluvoxamine Maleate 3 15 20 25 30 35 Experimental Time (Hours) 40 45 50 N Sleep,666,Fluvoxamine Maleate 4 3.5 Normalized Sleep/10 minutes 2 2 1.5 1 1 0.5 3 3 F 2.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 2 1.5 1 1 0 0 50 F 2 F 0.5 0 0 O 4 2.5 Normalized Waking Activity 10 3.5 3 fluvoxamine 5 4 2.5 0 0 4 3 Normalized Sleep/10 minutes Normalized Waking Activity Normalized Waking Activity chlorpheniramine Normalized Waking Activity zimelidine N HN 0.5 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 N O NH2 50 Time B. 5 5 Cl strobane Cl Cl Cl Cl Cl Cl Cl Cl toxaphene Cl Cl Cl Cl 2 Cl Cl 2 1.5 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 Cl 5 aldrin Average Waking Activity ,4783,Strobane 5 4.5 4 4 Cl 3.5 3 Cl Cl 2.5 2 2 Cl 1.5 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Cl Cl endosulfan Average Waking Activity ,4907,*(D)Toxaphene 5 5 4.5 4 4 3 3 2.5 O 2 2 1.5 O S 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 3 3 2.5 2 2 1.5 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 40 45 50 40 45 50 Average Waking Activity ,4804,Aldrin 5 5 4.5 4 4 3.5 3 3 2.5 2 2 1.5 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Average Waking Activity ,4782,Endosulfan 5 5 4.5 4 4 Cl 3.5 0.5 Cl Cl 3 3.5 1 Cl Cl 50 1 Cl Normalized Waking Activity Normalized Waking Activity 2.5 1 Cl 4 Cl 3 Normalized Waking Activity Cl 3 4 Normalized Waking Activity Cl 3.5 Normalized Waking Activity Cl Normalized Waking Activity Cl 4.5 Cl Cl Cl Normalized Waking Activity 4 4 Cl Cl heptachlor 4.5 Normalized Waking Activity Cl Average Waking Activity ,4797,Heptachlor 5 Average Waking Activity ,4915,*(H)Chlordane 5 chlordane O- 3 3.5 3 3 2.5 2 2 1.5 1 1 0.5 Cl O Cl 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time Cl 26 Figure S7 A. B. 5 3.5 0 4 1 1.5 2 2.5 3 3.5 6 4 4.5 3α-bis-(4-fluorophenyl) methoxytropane 1-benzo[B]thien-2-ylN-cyclopropyl methyl cyclohexanamine 1-[1-(2-benzo[B]thienyl) cyclohexyl]pyrrolidine 1-[1-(2-benzo[B]thienyl) cyclohexyl]piperidine 4.5 0.5 -0.2 0.2 trihexyphenidyl 5 0 metixene DOPA-U/ ACH-M- 0.2 0.2 6 -0.2 0 0 oxybutynin 7 -0.4 1 7 1 0.4 0.4 2 3 4 DOPA-U 2 3 5 4 5 6 DOPA-U/ACH-M- 7 -0.2 -0.2 -0.4 -0.4 7 ACH-M- Waking Activity Activity Total Rest Latency Rest Bout Length # Rest Bouts D. Rest Total C. 6 Name NAN-190 Quinazolin-5(6h)-one 5-methyl-urapidil Terazosin Quinacrine Quinacrine Ajmalicine RU-24969 Ifenprodil Ifenprodil ODQ Quinelorane WAY-100635 Buspirone PD 168077 Dihydroergocristine Hycanthone H-89 Nicergoline MK-912 Target/Indication 5-HT1A antagonist alpha-1 antagonist alpha-1 antagonist alpha-1 antagonist antimalarial antimalarial not annotated 5-HT1A agonist alpha-1 antagonist alpha-1 antagonist guanylyl cyclase dopamine agonist 5-HT1A antagonist 5-HT1A agonist dopamine agonist alpha-1 antagonist not annotated PKA antagonist alpha1-antagonist alpha1-antagonist Rank 1 2 3 4 6 7 8 10 13 15 16 17 18 20 21 23 26 27 30 32 33 36 37 38 42 43 45 47 49 54 55 Name Mean Correlation Quinacrine 0.851 1. Ifenprodil 0.848 WAY-100635 0.848 Droperidol 0.835 L-765314 0.831 Ajmalicine 0.828 MK-912 0.826 Buspirone 0.822 5-methyl-urapidil 0.818 Ifenprodil 0.817 Vincamine 0.817 H-89 0.813 WAY-100635 0.813 ARC 239 0.811 P-MPPF 0.810 Dihydroergocristine 0.809 NAN-190 0.802 RU-24969 0.802 NAN-190 0.797 Prazosin 0.793 M77 0.793 Quinazolin-5(6h)-one 0.789 Perphenazine 0.789 548 Nicergoline 0.785 BMY-7378 0.781 Quinacrine 0.781 Amodiaquine 0.778 Domperidone 0.770 Terazosin 0.769 Spiroxatrine 0.755 Risperidone 0.750 27 Correlation 0.2 3 4 oxybutynin 0.4 alcuronium metixene 4 2.5 0.4 trihexyphenidyl 2 0.6 3 alcuronium DOPA-U 0.6 0.6 benztropine benztropine 0.8 1.5 0.8 0.6 deptropine 1 1 1 0.8 2 3α-bis-(4-fluorophenyl) methoxytropane 3 DOPA-U/ ACH-M- 0.5 0.8 deptropine ACH-M- DOPA-U/ ACH-M- 2 3α-bis-(4-fluorophenyl) methoxytropane 1-benzo[B]thien-2-ylN-cyclopropyl methyl cyclohexanamine 1-[1-(2-benzo[B]thienyl) cyclohexyl]pyrrolidine 1-[1-(2-benzo[B]thienyl) cyclohexyl]piperidine 1 3α-bis-(4-fluorophenyl) methoxytropane 1 1 Figure S8 Adrenergic Signaling Waking Activity α2-adenergic agonists (Clonidine) 3 2 2 1.5 1 1 2.5 0.5 Normalized Waking Activity 0 0 10 15 20 25 30 35 Experimental Time (Hours) 40 45 2 1 1 0.5 0 3 3 Normalized Waking Activity 2.5 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 α1 antagonists (Ifenprodil) Average Waking Activity ,915,Ifenprodil Tartrate 2 2 1.5 1 1 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Sleep,5356,Clenbuterol Hydrochloride 2 2 1.5 1 0 0 0 0 10 15 20 25 30 35 Experimental Time (Hours) 40 45 10 3 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Sleep,915,Ifenprodil Tartrate 3 2 β-adrenergic antagonists (Carvedilol) 3 Average Waking Activity ,4571,Carvedilol Tartrate 3 1 0 5 10 3 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Sleep,4571,Carvedilol Tartrate 3 Normalized Sleep/10 minutes 2 1.5 1 1 0.5 2 2 1.5 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 1 0 0 0 R(-)-Isoproterenol Clenbuterol Fenoterol - - Nicergoline Prazosin Ifenprodil 5-methyl-urapidil Doxazosin L-765314 Beta 1 0.5 0 Clonidine Guanabenz Guanfacine Tizanidine UK 14304 sedating, analgesia (S23-S27) stimulant, insomnia (S28-S30) Alpha1 1 2.5 2 Selected References Antagonists 2 1.5 0 50 Effects in mammals Beta 5 2.5 0 5 Rest 1 0.5 0.5 0 Wake Alpha2 5 2.5 2.5 Normalized Waking Activity 0 3 0.5 0 1 3 Normalized Sleep/10 minutes 0 0 Agonists 1 0 Normalized Sleep/10 minutes 2 1.5 0 2 0 50 Average Waking Activity ,5356,Clenbuterol Hydrochloride 3 2.5 Normalized Waking Activity 5 β-Adrenergic agonists (Clenbuterol) 3 0 2 1.5 0.5 Normalized Rest 0 Sleep,3739,Clonidine 3 Normalized Sleep/10 minutes Normalized Waking Activity 2.5 Rest 3 Average Waking Activity ,3739,Clonidine 3 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 Bopindolol Carvedilol increased wake, mixed effects on REM sleep - reduced activity, sedation (S30-33) (S34, S35) 28 Figure S9 Serotonin Signaling Waking Activity 3 Normalized Sleep/10 minutes Normalized Waking Activity 2.5 2 1.5 1 0.5 0 2 2 1.5 1 1 0.5 0 0 10 15 20 25 30 35 Experimental Time (Hours) 40 45 1.5 1 1 10 15 20 25 30 35 Experimental Time (Hours) 40 45 20 25 30 35 Experimental Time (Hours) 40 45 50 Rest - 5HT1D agonists (Dihydroergotamine) Average Waking Activity ,692,Dihydroergotamine Methanesulfonate 1.5 1.5 1 1 5HT-2/3 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Sleep,692,Dihydroergotamine Methanesulfonate 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 5HT-2/3 agonists (Quipazine) Average Waking Activity ,3616,Quipazine 3 3 1.5 1 3.5 3 2.5 2 1.5 1 0.5 0 (S36-40) short term increases in waking followed by general deactivation (S41,42) migraine treatment potentiates 5HT-1A induced locomotion in guinea pig S43 N-methylquipazine Quipazine -/ short-term sleep suppression; long term increase in SWS -/ reduced locomotion; initial sleep suppression followed by long term SWS increase (S36,45-47) short-term insomnia in cats S48 increased sleep; increased exploration (S38, S49-52) (S38,S44) 5HT-1A 2 0 0 50 short term increases in waking; long term increases in SWS (humans, rats, cats) Antagonists 2.5 0.5 0 - 1 3 2 Selected References 5HT-1D 2 3.5 2 5HT-1B/D Dihydroergotamine GR 46611 2.5 3.5 3 2.5 2 1.5 1 0.5 0 Effects in mammals - CGS-12066A Sleep,610,Cgs-12066A Maleate 0 0 50 Normalized Sleep/10 minutes Normalized Waking Activity 5 0.5 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Sleep,3616,Quipazine 3.5 MM-77 NAN-190 P-MPPF S(-)-UH-301 Spiroxatrine WAY-100635 3 Normalized Sleep/10 minutes 2.5 2 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 5HT-1A antagonists (NAN-190) 3 Average Waking Activity ,3727,Nan-190 3 2 2 1.5 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 5HT-1D antagonists (Metergoline) 3 Average Waking Activity ,2503,Metergoline Phenylmethyl Ester 3 2.5 5HT-1D 2.5 Metergoline 2 1.5 5HT-2/3 1 0.5 0 0 3.5 3 2.5 2 1.5 1 0.5 0 Normalized Sleep/10 minutes 2.5 Normalized Rest 2 1.5 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Sleep,3727,Nan-190 3.5 Cinanserin Ketanserin LY-53857 Norcyclobenzaprine 3 Reuptake Inhibitors 2.5 2 1.5 1 0.5 0 0 3.5 3 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 45 50 Sleep,2503,Metergoline Phenylmethyl Ester 3.5 6-Nitroquipazine Fluoxetine Fluvoxamine Paroxetine Zimelidine improves insomnia in patients; REM suppression; biphasic effects on SWS in rats/cats -- up short term, down long term (S53-55) 3 Normalized Sleep/10 minutes Normalized Waking Activity 15 0.5 0 3 Normalized Waking Activity 10 3 2 3 Normalized Waking Activity 5 3.5 2 2.5 Normalized Waking Activity 1 3.5 3 2.5 2 1.5 1 0.5 0 0.5 2 2 1.5 1 1 0.5 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 5-HT-2/3 antagonists (Ketanserin) Average Waking Activity ,1248,Ketanserin Tartrate 3 3 Normalized Sleep/10 minutes 2 2 1 1 0.5 0 10 15 20 25 30 35 Experimental Time (Hours) 40 Sleep,1248,Ketanserin Tartrate 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Serotonin Reuptake Inhibitors (Fluvoxamine) 3 Average Waking Activity ,666,Fluvoxamine Maleate 3 0 0 3.5 3 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Sleep,666,Fluvoxamine Maleate 3.5 3 Normalized Sleep/10 minutes 2.5 2 2 1.5 1 1 0.5 0 3.5 3 2.5 2 1.5 1 0.5 0 5 3 1.5 0 0 0 3.5 2.5 Normalized Waking Activity 1.5 Normalized Sleep/10 minutes 2.5 Normalized Waking Activity 2 0 0 50 Average Waking Activity ,610,Cgs-12066A Maleate 3 Normalized Waking Activity 5 5HT1B/D agonists (CGS-12066A) 3 0 2.5 Wake 0.5 0 0 BMY-7378 BP-554 Buspirone PAPP RU-24969 3.5 2.5 0 Sleep,3696,Buspirone Average Waking Activity ,3696,Buspirone 3 0 Agonists 5HT-1A 5HT-1A-receptor agonists 3.5 (Buspirone) 3 3 0 Rest 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 29 Figure S10 Dopamine Signaling Waking Activity D1- agonists (SKF-83565) 3 Average Waking Activity ,1496,Skf 83565 Hydrobromide 3 Normalized Sleep/10 minutes 2 1 1 0.5 0 0 3 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 D2- agonists (Apomorphine) 50 50 3.5 3 2.5 2 1.5 1 0.5 0 1.5 1 1 0 10 15 20 25 30 35 Experimental Time (Hours) 40 45 Average Waking Activity ,1399,Ropinirole Hydrochloride 2 Normalized Waking Activity 1 1 0.5 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 D4-receptor agonists (PD-168077) 3 50 Average Waking Activity ,3574,Pd 168077 3 2 2 1.5 1 1 0.5 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 D1-antagonists (SCH-12679) 3 Average Waking Activity ,1274,R(-)-Sch-12679 Maleate 3 2 2 1.5 1 1 0.5 Apomorphine Bromocriptine Dipropyl-6,7-ADTN 1 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 D2-antagonists (Benperidol) 3 Average Waking Activity ,2913,Benperidol 3 Selected References increased waking, reduction in sleep (rat and monkeys), and increased grooming (S56-59) biphasic; at low concentrations, reduces waking and locomotor activity, and increases sleep. At high doses, the opposite. (S60-63) Pergolide reduced waking; no significant changes in sleep (S42,S64) non-stereotyped shuffling in rats S65 D2/3-Receptor -/ Quinelorane 2.5 2 Quinpirole 1.5 1 Ropinirole 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 D4-Receptor PD 168077 Sleep,3574,Pd 168077 Antagonists 3.5 3 D1-Receptor 2.5 2 R(-)-SCH-12679 1.5 SCH-23390 1 - decreased waking, increased sleep (S56-59, S61,S66) 0.5 0 0 3.5 3 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 D2-Receptor Benperidol Droperidol Sleep,1274,R(-)-Sch-12679 Maleate 3.5 3 extra-pyramidal effects (movement disorders); increased sedation Domperidone 2.5 (S57,S61, S66) L-741626 2 1.5 D3-Receptor 1 0 0 3.5 3 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 40 45 50 40 45 50 DS121 GR 103691 -/ short term increase in waking followed by longterm increases in sleep amount S65 Sleep,2913,Benperidol 3.5 3 Normalized Sleep/10 minutes 2.5 2 2 1.5 1 1 0.5 0 Effects in mammals (-)-3PPP Sleep,1399,Ropinirole Hydrochloride 0.5 0 /- D2-Receptor 1.5 3.5 3 2.5 2 1.5 1 0.5 0 Normalized Sleep/10 minutes 2.5 N-Allyl-SKF-38393 SKF 83565 Sleep,2347,R(-)Apomorphine Hydrochloride Hemihydrate 2 0 0 Normalized Sleep/10 minutes Normalized Waking Activity 45 0.5 0 2.5 Normalized Waking Activity 40 3 2 0 20 25 30 35 Experimental Time (Hours) Rest 3.5 1.5 0 15 2.5 0 0 Normalized Sleep/10 minutes 2.5 Normalized Waking Activity 5 D2/3-agonists (Ropinirole) 3 0 10 0.5 0 3 0 5 3 2 0 Normalized Waking Activity R(+)-6-Bromo-APB 1 3.5 0.5 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 D3 antagonists (DS121) 3 Average Waking Activity ,885,S(-)-Ds 121 Hydrochloride 3 0 0 3.5 3 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) Sleep,885,S(-)-Ds 121 Hydrochloride 3.5 3 Normalized Sleep/10 minutes 2.5 Normalized Waking Activity 1.5 3.5 3 2.5 2 1.5 1 0.5 0 2 2 2 1.5 1 1 0.5 0 2 0 0 Normalized Sleep/10 minutes Normalized Waking Activity 5 Average Waking Activity ,2347,R(-)Apomorphine Hydrochloride Hemihydrate 3 2.5 0 Chloro-APB CY 208-243 2.5 0.5 0 Wake D1-Receptor Sleep,1496,Skf 83565 Hydrobromide 3 2 0 Agonists 3.5 1.5 0 3.5 3 2.5 2 1.5 1 0.5 0 Normalized Rest Normalized Waking Activity 2.5 Rest 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 30 Figure S11 GABAergic Signaling Waking Activity GABA-A agonist (GBLD-345) 3 3 2 2 1.5 1 1 0.5 0 0 20 25 30 35 Experimental Time (Hours) 40 45 Normalized Sleep/10 minutes 1 1 0.5 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 GABA-A-antagonist (1S,9R-Hydrastine) Average Waking Activity ,4354,"*(S)1S,9R-Hydrastine" 3 20 25 30 35 Experimental Time (Hours) 40 45 50 2 1.5 1 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 GABA agonist/ antagonist (Tracazolate) 3 Average Waking Activity ,3474,*(D)Tracazolate Hydrochloride 3 2.5 50 CGP-13501 Rest - /- Effects in mammals Selected References anxiolytic; sedative S68 hypnotic S69 Sleep,410,Cgp-13501 Antagonists GABA-A 2 1S,9R-Hydrastine 1.5 1 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Endosulfan Heptachlor Chlordane 3.5 3 2.5 2 1.5 1 0.5 0 Normalized Sleep/10 minutes 2 50 increased locomtor activity; induction of fighting; pro-convulsant (S70-72) Heptachlor Sleep,4354,"*(S)1S,9R-Hydrastine" 3.5 Aldrin 3 2.5 2 1.5 1 0.5 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 dose dependant Mixed (+/-) Modulator anxiolytic; increase or decrease in Tracazolate - locomotor activity Neuroactive Steroid GABA Regulators Allopregnanolone - stimulant; anxiolytic; ataxic; Pregnanolone 3.5 3 2.5 2 1.5 1 0.5 0 Alfadolone Sleep,3474,*(D)Tracazolate Hydrochloride 3.5 depressant (S73,74) (S75-77) hypnotic 3 2 2 1.5 1 1 0.5 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Steroidal GABA agonist (Alfadolone) 3 Average Waking Activity ,3397,Alfadolone Acetate 3 2.5 2 0 0 3.5 3 2.5 2 1.5 1 0.5 0 2 1.5 1 1 0.5 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 40 45 50 Sleep,3397,Alfadolone Acetate 3.5 3 Normalized Sleep/10 minutes Normalized Waking Activity 15 2.5 0 0 Normalized Rest 0 3 0 10 0.5 2.5 0 GABA-B 5 3 1.5 0 1 3.5 2 0 1.5 3.5 3 2.5 2 1.5 1 0.5 0 2 0 GBLD-345 Avermectin B1 2 0 0 50 Normalized Sleep/10 minutes Normalized Waking Activity Normalized Waking Activity 15 Average Waking Activity ,410,Cgp-13501 3 Normalized Waking Activity 10 GABA-B- agonist (CGP-13501) 3 Normalized Waking Activity 5 Wake GABA-A 2.5 0.5 0 2.5 0 Agonists Sleep,3384,Gbld345 3.5 Normalized Sleep/10 minutes 2.5 Normalized Waking Activity 3.5 3 2.5 2 1.5 1 0.5 0 Average Waking Activity ,3384,Gbld345 3 Rest 2.5 2 1.5 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 31 Figure S12 Melatonin Signaling Waking Activity Melatonin Agonist (8-methoxy3 2-propionamidotetralin) 3.5 Average Waking Activity ,1952,8-Methoxy-2-Propionamidotetralin Normalized Sleep/10 minutes 2 1 1 0 0 3 3 2.5 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Melatonin Agonist (IIK7) Average Waking Activity ,919,Iik7 2 2 1.5 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 Sleep,1952,8-Methoxy-2-Propionamidotetralin Selected References increase in sleep propensity in dirunal species; circadian phase shifting (S78-81) Antagonists 1 0 0 3.5 3 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 40 45 50 40 45 50 K 185 DH 97 /- blocks melatonin effects on behavior S82 Sleep,919,Iik7 3.5 3 2.5 2 1.5 1 0.5 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Sleep,1970,DH 97 3.5 3 3 2.5 2 2 1.5 1 1 0.5 0 /- Effects in mammals 2 1.5 3.5 3 2.5 2 1.5 1 0.5 0 Average Waking Activity ,1970,DH 97 Rest - IIK7 2.5 0.5 50 Melatonin Antagonist (DH 97) 3 0 Normalized Rest 0.5 Normalized Sleep/10 minutes 2 1.5 Normalized Sleep/10 minutes Normalized Waking Activity Normalized Waking Activity Normalized Waking Activity 3 2.5 2 1.5 1 0.5 0 Wake 8-methoxy-2propionamidotetralin Melatonin 3 2.5 Normalized Waking Activity Agonists 3.5 3 0 Rest 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 32 Figure S13 Histamine Signaling Waking Activity H1-receptor antagonist (Clemizole) 3 Average Waking Activity ,2615,Clemizole hydrochloride 3 H1-(no HERG block) Sleep,2615,Clemizole hydrochloride 3 Normalized Sleep/10 minutes 2 1 1 0.5 Chloropyramine 2.5 2 Clemizole 1.5 Wake 0 Loratadine 1 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 3 Average Waking Activity ,5651,Diphenylpyraline Hydrochloride 3 2 1.5 1 1 0.5 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 H1-antagonist(+HERG) (Clemastine) 3 Average Waking Activity ,5553,Clemastine 3 15 20 25 30 35 Experimental Time (Hours) 40 45 50 sedation (less pronounced in loratadine) (S83-86) - Trimeprazine Diphenylpyraline 3.5 3 2.5 2 1.5 1 0.5 0 Selected References psychostimulant S87 H1- (HERG Blockers) Sleep,5651,Diphenylpyraline Hydrochloride Astemizole 3 2.5 Clemastine 2 Meclizine 1.5 1 0.5 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Oxatomide Promethazine /- some sedation in 1st generation anti-histamines; less pronounced in second generation anti-histamines Terfenadine 3.5 3 2.5 2 1.5 1 0.5 0 Sleep,5553,Clemastine 3 Normalized Sleep/10 minutes 2 2 1.5 1 1 0.5 0 10 Effects in mammals 3.5 2.5 0 5 3.5 Normalized Sleep/10 minutes 2 0 0 0 50 H1-antagonist (psychostimulant) (Diphenylpyraline) Rest -/ 0.5 0 Normalized Rest Normalized Waking Activity Antagonists 3.5 2 2.5 Normalized Waking Activity 3.5 3 2.5 2 1.5 1 0.5 0 1.5 Normalized Waking Activity Normalized Waking Activity 2.5 Rest 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Time 33 Figure S14 Adenosine Signaling Waking Activity Agonist (2-chloroadenosine) 3 Average Waking Activity ,2146,2-Chloroadenosine 3 Normalized Sleep/10 minutes 2 2 1 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 A1-antagonist (8-cyclopentyl-1,3dipropylxanthine) 3 Average Waking Activity ,599,"8-Cyclopentyl-1,3-Dipropylxanthine" 3 2 2 1.5 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 A3-antagonist (MRS-1220) 3 Average Waking Activity ,2210,Mrs 1220 3 2.5 50 2 50 2 1 1 0.5 0 Effects in mammals Selected References increased sleep; decreased locomotor activity (S88-92) A1 1 3.5 3 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 1,3-diethyl-8phenylxanthine 8-cyclopentyl-1,3dipropylxanthine A3 Sleep,599,"8-Cyclopentyl-1,3-Dipropylxanthine" 3.5 MRS-1220 3 (S88,93) locomotor stimulant -/ unknown behavioral effects 2.5 2 1.5 1 0.5 0 0 3.5 3 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 40 45 50 Sleep,2210,Mrs 1220 3.5 3 1.5 0 2 1.5 0 0 Normalized Sleep/10 minutes 2.5 - Rest Antagonists 2.5 0.5 Normalized Rest 0 Adenosine 2-chloroadenosine Sleep,2146,2-Chloroadenosine Wake 3 1.5 0 Rest 3.5 Normalized Sleep/10 minutes Normalized Waking Activity Normalized Waking Activity Normalized Waking Activity Normalized Waking Activity 2.5 3.5 3 2.5 2 1.5 1 0.5 0 Agonists 2.5 2 1.5 1 0.5 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 34 Figure S15 Glutamate Signaling 3 1 1 0.5 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 mGluR 5 antagonist (MPEP) 3 Average Waking Activity ,1990,2-Methyl-6-(phenylethynyl)pyridine 3 Normalized Waking Activity 2.5 2 2 1.5 50 1 1 0.5 0 0 Normalized Sleep/10 minutes 2 Normalized Rest Normalized Waking Activity 2 0 2.5 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 Effects in mammals Selected References anxiolytic; hyperlocomotion; anti-convulsant (S94,95) anxiolytic; can block drug induced hyperlocomotion (S96,97) 2 CNS-1102 1.5 1 0 0 45 50 -/ IEM 1460 0.5 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 L-689560 L-701252 3.5 3 2.5 2 1.5 1 0.5 0 L-701324 Sleep,1990,2-Methyl-6-(phenylethynyl)pyridine 3.5 MK-801 3 SDZ 220-581 2.5 2 1.5 mGluR5 1 0.5 0 Rest DCQX 7-chlorokynurenic acid 3 1.5 0 3.5 3 2.5 2 1.5 1 0.5 0 Sleep,3659,"L-701,252" 3.5 2.5 0 Rest Wake NMDA Average Waking Activity ,3659,"L-701,252" 3 Normalized Sleep/10 minutes Normalized Waking Activity Waking Activity NMDA antagonist (L-701252) Antagonists 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) Time 40 45 50 MPEP SIB 1757 -/ 35 Figure S16 A. Waking Activity O 4 5 O 3 Normalized Waking Activity 4 3 2 2.5 22 11 2 1.5 1 1 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 0 50 Methoxyverapamil Methoxy-verapamil Average Waking Activity ,2351,Verapamyl Hydrochloride 5 55 4 44 5 O 4 4 O 4.5 Normalized Waking Activity O O 3 N 3.5 3 33 2 22 3 O N 2 2.5 2 1.5 1 11 1 0.5 00 0 0 5 10 15 35 40 20 25 30 35 Experimental Time (Hours) 40 45 45 0 50 Verapamil 5 5 4 4 33 Average Waking Activity ,2351,Verapamyl Hydrochloride 5 Normalized Waking Activity 2 2 1.5 1 1 0.5 0 0 0 0 5 5 10 15 3 O N O 3 O N 2.5 22 11 2 2 1.5 1 1 0.5 40 45 50 40 45 50 4 3.5 3 3 2.5 2 2 1.5 1 1 0.5 0 0 0 0 55 10 15 20 25 30 35 Experimental Time (Hours) Average Waking Activity ,2351,Verapamyl Hydrochloride 4 5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 0 43 3 4 3.5 3 2 2 11 3 2 2.5 2 1.5 1 1 0.5 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 0 Time C. YS-035 Rest YS-035 YS-035 Waking Activity 60 60 66 66 50 50 55 40 40 44 Day 30 30 33 Night 20 20 22 10 10 11 Average Waking Activity (seconds/minute) Average Waking Activity minutes Rest rest per Minutes perhour Hour (seconds/minute) 30 Sleep,83,Methoxy Verapamil 4 Time B. 25 20 25 30 35 Experimental Time (Hours) O 4 0 3 4.5 3.5 00 3 2.5 4 5 4 4.5 Normalized Waking Activity Normalized Waking Activity 0.5 0 4 3.5 3.5 00 Sleep,1546,Ys-035 Hydrochloride 4 N Normalized Sleep/10 minutes 4.5 Normalized Sleep/10 minutes 5 5 5 4 4 4 33 O O Average Waking Activity ,2351,Verapamyl Hydrochloride Normalized Rest Normalized Rest YS-035 Rest 55 44 33 22 11 00 00 0uM 0 100nM-7 100nM 1x10 300nM-7 300nM 3x10 1uM -6 1uM 1x10 3uM -6 3uM 3x10 10uM -5 3x10 30uM-5 10uM 30uM 1x10 Concentration (Molar) Concentration (Molar) 0uM 0 100nM-7 1x10 300nM-7 3x10 1uM -6 1x10 3uM -6 3x10 10uM -5 3x10 30uM-5 1x10 Concentration (Molar) 36 Figure S17. Glucocorticoid Betamethasone O Average Waking Activity ,318,Betamethasone O HO 5 5 4.5 4 4 3.5 3 4 F 3.5 O 3 3 2.5 2 2 1.5 1 3 2.5 2 2 1.5 1 1 1 0.5 0.5 0 0 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Immunomodulator (NFAT signaling) cyclosporin A 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 PDE inhibitor Fosfosal 4 O 3.5 OH 4 Normalized Sleep/10 minutes O 3.5 3 3 2.5 2 2 1.5 1 1 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Time NSAID Average Waking Activity ,4460,FENOPROFEN 5 5 O Fenoprofen 4.5 4 OH Normalized Rest 0 4 3 3 2.5 2 2 1.5 1 1 2 1.5 1 1 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Time Sleep,4460,FENOPROFEN 4 4 3 3 2.5 2 2 1.5 1 1 0.5 0.5 0 3 2 3.5 O 3.5 0 3 2.5 0.5 0.5 Normalized Sleep/10 minutes Normalized Waking Activity Normalized Waking Activity Normalized Waking Activity 4 0 Sleep,4662,Fosfosal 4 Average Waking ActivityP,4662,Fosfosal 5 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 0 0 50 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 50 Time Time Immunomodulator HO O 5 O O Cyclosporin A N Average Waking Activity ,2764,Cyclosporin A 4.5 O H N N N 4 4 3.5 H N N H O 3.5 4 O N H N N O N O O O 3 3 2.5 2 2 1.5 1 1 0 0 3 3 2.5 2 2 1.5 1 1 0.5 0.5 0 Sleep,4664,Cyclosporine 4 N O Normalized Sleep/10 minutes 5 Normalized Waking Activity Other Anti-inflammatory agents aminophenazone capsazepine catechin tetramethyl ether cepharanthine pentamidine theaflavin digallate valproate sodium 5-aminopentanoic acid 5 Time 4.5 Non-Steroidal Anti-Inflammatory drugs (NSAIDs) bufexamac diflunisal fenoprofen piroxicam 0 Time 5 PDE inhibitors diplosalsalate fosfosal papaverine propentofylline Ro 20-1724 SKF-94836 Sleep,318,Betamethasone 4 OH O Normalized Sleep/10 minutes Glucocorticoids betamethasone clobetasol desoxycorticosterone dexamethasone flumethasone flunisolide hydrocortisone medrysone 6α-methylprednisolone ursolic acid B. Normalized Waking Activity A. 5 10 15 20 25 30 35 Experimental Time (Hours) 40 45 Time Waking Activity 50 0 0 0 5 10 15 20 25 30 35 Experimental Time (Hours) 40 Time Rest 37 45 50 Figure S18 Waking Activity A. 5 4 F Halofantrine F Rest 4 F 3 Cl N 3 Cl 2 OH 2 1 1 0 5 4 Terfenadine OH OH N 3 2 1 0 5 4 Psora-4 3 2 1 0 4 O O O O 2 2 3 4 3 3 3.5 Normalized Rest Normalized Waking Activity 0 1 1 0 0 Time Time 2.5 3.5 1.5 3 1 2.5 0.5 2 0 1.5 3.5 3.5 3.5 3 3 3 2.5 2.5 2.5 Average Night Waking Activity (seconds/minute) B.2 2 2 2 1.5 1.5 1.5 1 1 1 0.5 0 0 Fexofenadine Citirizine ERGLoratadine blockers Cisapride Dofetilide Non-ERG blockers Fexofenadine Cetirizine Citirizine 0.5 0.5 0 0 Loratadine 1uM 0.5 10uM 30uM Cisapride Dofetilide 0 0 1 3uM 0 1uM -61uM 1x10 3uM 3uM -6 3x10 10uM 10uM -5 1x10 Concentration (Molar) 30uM 30uM-5 3x10 38 Table S1 Drug Name Clonidine Ropinirole NAN-190 MK-801 Betamethasone Chloro-APB Buspirone Cyclosporin A Ketanserin Nicergoline Quipazine Warfarin Fluvoxamine Valproic Acid Carvedilol 2-Chloroadenosine Phenelzine Trazodone Clozapine Amoxapine Cyclobenzaprine Fluoxetine Haloperidol Loxapine Papaverine Pergolide Bromocriptine Dihydroergotamine Metergoline Highest NonToxic Dose (30/45 µM max) 45 µM 45 µM 30 µM 45 µM 45 µM 45 µM 45 µM 45 µM 15 µM 15 µM 45 µM 45 µM 45 µM 45 µM 4.5 µM 45 µM 45 µM 45 µM 15 µM 30 µM 15 µM 15 µM 15 µM 15 µM 3.0 µM 45 µM 15 µM 45 µM 15 µM Lowest Effective Dose 1.5 µM 0.45 µM 0.10 µM 0.45 µM 0.15 µM 0.45 µM 4.5 µM 2 µM 0.15 µM 1.5 µM 1.5 µM 4.5 µM 1.5 µM 15 µM 0.45 µM 45 µM 45 µM 1.5 µM 1.5 µM 3.0 µM 4.5 µM 1.5 µM 1.5 µM 0.45 µM 1.0 µM 0.45 µM 0.15 µM 0.15 µM 15 µM Correlated Dose Range 1.5-45 µM 0.45-45 µM 0.10-30 µM 0.45-45 µM 0.15-45 µM 0.45-45 µM 4.5-45 µM 2-45 µM 0.15-45 µM 4.5-45 µM 0.15-45 µM 4.5-45 µM 0.45-45 µM 0.45-45 µM 0.45-4.5 µM 0.15-45 µM 4.5-15 µM 1.5-15 µM 1.5-15 µM 1.0-10 µM 1.5-15 µM 1.5-4.5 µM 0.15-1.5 µM 0.15-4.5 µM 0.30-3.0 µM 4.5-45 µM; 0.15-1.5 µM 1.5-15 µM; 0.15-1.5 µM 4.5-45 µM; 0.15-1.5 µM 4.5-15 µM; 0.15-1.5 µM 39 Supplemental References S1. 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S1, S2, S3, S4, S5, S6, S7, S8, S9, S10, S11, S12, S13, S14, S15, S16, S17, S18 Table S1 43