Cyperaceae - RIO Principal - Universidad Pablo de Olavide, de Sevilla
Transcription
Cyperaceae - RIO Principal - Universidad Pablo de Olavide, de Sevilla
Dpto. Biología Molecular e Ingeniería Bioquímica The bipolar disjunction in biogeography: case studies in the genus Carex (Cyperaceae) La disyunción bipolar en biogeografía: casos de estudio en el género Carex (Cyperaceae) TESIS DOCTORAL Tamara Villaverde Hidalgo Sevilla, 2015 Dpto. Biología Molecular e Ingeniería Bioquímica The bipolar disjunction in biogeography: case studies in the genus Carex (Cyperaceae) La disyunción bipolar en biogeografía: casos de estudio en el género Carex (Cyperaceae) Memoria presentada por la licenciada en Biología Tamara Villaverde Hidalgo para optar al título de Doctora en Estudios Medioambientales (Doctorado Internacional) por la Universidad Pablo de Olavide de Sevilla. Sevilla, Julio 2015 Directores Dr. Modesto Luceño Garcés Dr. Santiago Martín Bravo Dr. Marcial Escudero Lirio Agradecimientos Para poder llegar hasta el volumen que tienes ahora en las manos, ha sido necesaria la ayuda de muchas personas. Éste ha sido un camino muy duro, aunque también muy enriquecedor, que no hubiera sido posible terminar sin las manos prestadas por los siguientes compañeros de viaje: Mis directores de tesis. Modesto, muchas gracias por dejarme cumplir un sueño y darme la oportunidad de crecer profesionalmente. Hacer una tesis sin beca es una de las situaciones más indeseables para un doctorando. Gracias por creer que merecía la pena invertir en mí y por darme la posibilidad de estar en las aulas, ha sido una de las experiencias más gratificantes de mi vida. Siempre te estaré agradecida. Marcial y Santi, además de prestaros a ser mi brújula y mi mapa, habéis puesto el ímpetu y las ganas para llegar hasta aquí. Gracias por subiros al barco, cuidarme tanto y darme vuestro afecto. Ha sido un verdadero placer aprender a vuestro lado. Gracias de todo corazón. Mis compañeros de laboratorio. Enrique, Inés, Jose, Marcial, Modesto, Mónica, Paco, Pedro y Santi, sois mi familia en la UPO. Gracias por haber actuado como una válvula de escape al estrés de la tesis, a veces, volviéndome a poner los pies en la tierra, y otras, haciéndome reír hasta perder la respiración. He tenido mucha suerte llegando a un grupo como el vuestro, donde siempre he contado con vuestra ayuda y cariño. ¡Gracias! Sir Henry, me siento muy afortunada por haberte conocido y por haber encontrado en ti un hombro (el de un gigante) en el que apoyarme durante este camino. Gracias por ser una persona tan maravillosa conmigo. ¡MagVilla’s! También quiero darle las gracias a esos compañeros que han pasado por el laboratorio y con los que he pasado uno buenos momentos: Carlos, Carmen, Cristina, Flo, Gloria, Laura, Manu, Nacho, Paloma, Samuel, Víctor… y a todos los estudiantes del área de botánica que han estado conmigo estos años. Compañeros de otros laboratorios. Quiero darle las gracias a todo el equipo de Andrew Hipp (The Morton Arboretum): Andrew, Bethany, Elisabeth, Marlene, grupo de voluntarios, Elisabeth Li (biblioteca) y demás compañeros, que han hecho que mi estancia en Chicago haya sido fabulosa. ¡Gracias por vuestra ayuda y por enseñarme tantas cosas! Quiero darle también las gracias a las personas que han recolectado para estos trabajos (Leo Bruederle, Pedro Jiménez Mejías, Mihai Pusças, Wayne Sawtel, Pablo Vargas,), y a todos los conservadores de los herbarios que nos han dado acceso a sus colecciones. También quiero darle las gracias a Paco Rodríguez Sánchez (Estación Biológica de Doñana – CSIC) por su ayuda y comentarios a los análisis de nicho ecológico así como a José Luis Blanco Pastor por su ayuda con el programa Maxent. Gracias a todos los investigadores del Canadian Museum of Nature, Jeff Saarelay Lynn Gillespie, por ayudarme con los trabajos de morfometría y a Michel Gosselin por facilitarme mucha bibliografía ornitológica. También a mis compañeros de laboratorio: Anna, Jocelyn, Katia, Neda, Paul, Roger, Wayne... Mis amigos. Tengo un grupo de cinco amigas de toda la vida a las que quiero agradecer que siempre hayan estado, y estén, ahí. Carmen, Campano, María, Martínez y Porti, gracias por ser mis Malvadas hermanas postizas. Llegar hasta aquí ha sido gracias a tardes llenas de risas y sabios consejos. Tengo otro grupo de amigos que, aunque hayan llegado un poco más tarde, son los culpables de ponerme un sonrisote y una cerveza en la mano estos años de tesis: Cobos, Coco, Vero, Edu, Eli, Elisa, Esteban, Estrella, Jeovani, Maite, Raquel, Rosa, Paco, compis de la carrera, compis del máster en la UPO, compis de Toastmaster Sevilla, … Mi familia. Tengo la familia más molona del mundo mundial. Sois mi refugio, mi ejemplo de esfuerzo y mi inspiración diaria. Gracias por ser incondicionales y buscar los medios, las palabras y los abrazos necesarios para animarme a perseguir mis metas en la vida. A mis padres. A mis hermanos. ÍNDICE Abstract / Resumen …………………………………………………………… 1 Chapter 1. Introduction ……………………………………………………. 1 Biogeography ……………………………………………………………. Bipolar plant disjunctions ……………………………………………… 22 Hypothesis tested in bipolar disjunctions ……………………………… 23 Molecular markers for biogeographical studies and the need of divergence analyses ………………………………………………………………… 28 Carex (Cyperaceae), the genus with the greatest number of bipolar species ……………………………………………………………………. 30 Objetives by chapters …………………………………………………… 36 References ……………………………………………………………… 38 Appendix S1 ……………………………………………………………. 47 Chapter 2. Taxonomy of the Carex capitata complex………………………… 59 Abstract ………………………...……………………………………… 62 Introduction ………………………………………………………………63 Materials and methods …………………………………………..…… 64 Results …………………………………………………………….…… 68 Discussion ……………………………………………………………...... 75 References ……………………………………………………………….. 93 Appendix S1 ……………………………………………………………... 97 Additional Information ……………………………………………...…... 123 Chapter 3. Direct long-distance dispersal best explains the bipolar distribution of Carex arctogena (Carex sect. Capituligerae, Cyperaceae) ……………………. 155 Abstract ……………………………………………………………...... 154 Introduction ……………………………………………………….....…. 154 Materials and methods ………………………………………………159 Results ………………………………………………………………….... 160 Discussion …………………………………………………………........... 162 Acknowledgements ……………………………………………………. 166 References …………………………………………………………….... 166 Appendix S1 ………………………………………………………….….. 169 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction of Carex maritima (Cyperaceae)……………………... 187 Abstract ………………………………………………………………... 189 Introduction ……………………………………………………………. 189 Materials and methods ………………………………………………… 190 Results …………………………………………………………………. 192 Discussion …………………………………………………………….. 195 Acknowledgements ……………………………………………………. 198 References ……………………………………………………………... 198 Appendix S1 …………………………………………………………... 201 Appendix S2 …………………………………………………………....... 217 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens Cyperaceae) …………………………………………………………………………………… 229 Abstract …………………………………………………………………... 232 Introduction ………………………………………………………………. 234 Materials and methods ………………………………………………… 236 Results …………………………………………………………………. 240 Discussion ……………………………………………………………...... 243 Acknowledgements ……………………………………………………. 247 References ……………………………………………………………... 248 Appendix S1 ……………………………………………………………... 261 Appendix S2 ……………………………………………………………... 275 Capítulo 6. Discussion and conclusions ……………………………………….. 283 Carex arctogena is a bipolar species …………………………………….. 285 Geological and climatic changes since the Miocene that allowed Northern and Southern…………………………………………………………………... 292 Direct long-distance dispersal vs. mountain-hopping …………………. 296 North to South long-distance dispersal ………………………………... 297 Means of dispersal ……………………………………………………….. 300 Successful establishment after dispersal in Carex bipolar species………. 305 Conclusions ………………………………………………………………. 308 References ………………………………………………………………... 31 0 Abstract At a global level, one of the most fascinating plant distribution patterns is the bipolar disjunction. Bipolar species are defined here as species occurring at very high latitudes (>55ºN and >52ºS) in both hemispheres, regardless of their distribution in intermediate areas. Under these criteria, around 30 vascular plant species have such distribution, being Carex (Cyperaceae) the genus with the largest number of bipolar species (six). We performed a biogeographic study on three of them (C. arctogena, C. maritima and C. canescens), based on morphological, molecular and bioclimatic data to shed light on the origin of their bipolar distribution. The four traditional hypotheses accounting for this pattern were tested: vicariance, direct long-distance dispersal, mountain hopping and convergence / parallel evolution. Methods used to accomplish this objective include molecular phylogenetic and phylogeographic analyses, divergence time estimation analyses, uni- and multivariate morphometric analyses, and species niche modelling. The low levels of genetic differentiation found between populations of both Hemisphere and relatively recent times of diversification allow rejecting all but the long-distance dispersal hypothesis (including direct long distance dispersal and mountain hopping) for the studied Carex bipolar species. The studied species probably migrated from the Northern Hemisphere to the Southern Hemisphere. In the case of C. canescens, two independent dispersal events were needed to achieve its current distribution. Resumen A nivel global, uno de los patrones de distribución más fascinantes corresponde a la disyunción bipolar. Las especies bipolares se definen en este trabajo como aquellas que se distribuyen a muy altas latitudes (>55ºN y >52ºS) en ambos hemisferios, independientemente de tener poblaciones a latitudes intermedias. Bajo estos criterios, 15 aproximadamente 30 especies de plantas vasculares presentan esta distribución, siendo el Carex (Cyperaceae) el género con mayor número de especies bipolares (seis). Hemos realizado un estudio biogeográfico en tres de ellas (C. arctogena, C. maritima y C. canescens), basándonos en datos morfológicos, moleculares y bioclimáticos para aportar evidencias sobre el origen de sus disyunciones bipolares. Testamos las cuatro hipótesis tradicionalmente propuestas para explicar este patrón: vicarianza, dispersión directa a larga distancia, saltos entre montañas, y evolución paralela o convergente. Los métodos usados para alcanzar este objetivo incluyen análisis moleculares filogéneticos y filogeográficos, análisis de estimación de tiempos de divergencia, análisis morfométricos uni- y multivariables, y modelización de nicho. Los bajos niveles de diferenciación genética encontrados entre las poblaciones de ambos hemisferios, así como los relativos recientes tiempos de diversificación de las especies estudiadas nos permiten rechazar todas las hipótesis excepto la dispersión a larga distancia (incluyendo dispersión directa y por salto de montañas). Las especies estudiadas probablemente migraron del Hemisferio Norte al Hemisferio Sur. En el caso de C. canescens, dos eventos de dispersión independientes fueron necesarios para alcanzar su distribución actual. 16 Chapter 1 Introduction 17 18 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Introduction Biogeography Darwin (1809 – 1882; 1859, p.1) begins the Origin of the Species concerned about the information that could be gathered from the historical and geographical distribution of organisms in the light of his theory. Distribution was an important dimension of Darwin’s theory of evolution: “When on board of H.M.S. Beagle, as a naturalist, I was much struck with certain facts in the distribution of the inhabitants of South America, and in the geological relations of the present to the past inhabitants of that continent. These facts seemed to me to throw some light on the origin of species”. He did not only find dispersal as the most plausible explanation for the distribution of organisms [“ …the view of each species having produced in one area alone, and having subsequently migrated from that area as far as its power of migration and subsistence under past and present conditions permitted, is the most probable” (Darwin, 1859, p. 353)], but he also highlighted it as a key element shaping species range [“…all the grand leading factors of geographical distribution are explicable on the theory of migration (generally of the more dominant forms of life), together with subsequent modification and the multiplication of forms. We can then understand that high importance of barriers, whether of land or water, which separate our several zoological and botanical provinces” (Darwin, 1859, p. 409)]. He devoted two out of 15 chapters of the Origin of the Species to the study of the distribution of taxa over geographic space and time, this is, to biogeography. Therefore, biogeography may be understood as a key element on Darwin’s theory of evolution. He emphasized three points: (1) barriers to migration allowed time for the slow process of modification through natural selection; (2) the concept of single centres of creation was critical; that is, each species was first originated in a single area only, 19 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction and from that centre it would extend as far as its colonization ability would permit; (3) dispersal was a phenomenon of overall importance. Alexander von Humboldt (1769 – 1859), often recognized as the father of plant biogeography (Brown and Lomolino, 1998), and many other illustrious researchers such as Alfred Wallace (1823 – 1913) or, more recently, Robert MacArthur (1930 – 1972) and Edward Wilson (1929 –) were captivated by this discipline. It started as a descriptive science, mapping the major vegetation types and their associated fauna, then adding diversity patterns along different gradients (e.g. latitudinal or elevation) to finally become a multidisciplinary science that links fields such as systematics, ecology, paleontology or climatology (Morrone, 2009). It has allowed the designation of the biogeographic realms – those areas into which the Earth can be divided given the distinct characteristics of flora and fauna found in each area (Figure 1). 20 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction ◄ Figure 1. Biogeographical kingdoms and regions of the world from Morrone (2002). 1–2, Holarctic kingdom (= Laurasia): 1, Nearctic region; 2, Palaearctic region; 3–6, Holotropical kingdom (= eastern Gondwana): 3, Neotropical region; 4, Afrotropical region; 5, Oriental region; 6, Australotropical region. 7–12: Austral kingdom (= western Gondwana): 7, Andean region; 8, Cape or Afrotemperate region; 9, Antarctic region; 10, Neoguinean region; 11, Australotemperate region; 12, Neozelandic region. Biogeography may be considered either a synthetic (Brown & Lomolino, 2011) or an interdisciplinary (Morrone, 2009, Figure 2) discipline, and for this reason, biogeography is regarded as heterogeneous in its principles and methods, lacking the conceptual unity of other sciences (Morrone, 2009). Biogeography is divided in two categories: ecological and historical biogeography (Sanmartín, 2012). ◄ Figure 2. Interdisciplinary situation of biogeography, at the intersection of 6 different disciplines (modified from Morrone, 2009). Ecological biogeography is concerned with ecological processes occurring over short temporal and small spatial scales (Myers and Gillers, 1988). In contrast, when dealing with evolutionary processes that concerns large time scales (i.e. millions of years) and large or global geographic scales, we run into historical biogeography (Crisci, 2001). Historical biogeography attempts to reconstruct the origin of taxa, this is, it addresses the how, when, 21 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction and why of species distributions (Jablonski et al., 1985). It is concerned about taxa’s sequences of dispersal, isolation, and extinction; and to explain how geological events have shaped their present-day distribution (Myers & Giller, 1988). Important questions are why a taxon is absent from apparently suitable areas beyond its present range, and how taxa have become spatially separated or disjunct (Giller et al., 2004). It is hypothesized that such patterns can be naturally caused by the break-up of a once continuous range (vicariance), by long-distance dispersal, or through independent origins of the taxon in two or more places (parallelism or convergence). If we level down to microevolution, we encounter phylogeography, which concentrates on the geographic distribution of genealogical lineages, especially those within and among closely related taxa (Avise, 2000). At this level, the coalescence theory help to model genealogies within populations; in population genetics, it is applied to several individuals sampled from one population whereas in phylogenetics, only one individual is often sampled per population (as individuals from the same population are usually assumed to be genetically similar compared to the differences that exist among populations or species, Degnan & Rosenberg, 2009). Bipolar plant disjunctions Disjunct distribution of species is defined as any discontinuous distribution in which some parts of the species (or taxa) range are clearly separated from another part (Morrone, 2009). One of the most fascinating plant distribution patterns concerning the Southern Hemisphere encompasses the bipolar disjunction. Bipolar species are defined in this work as species growing at very high latitudes (>55ºN and >52ºS) in both hemispheres, regardless of their distribution in intermediate areas (Moore & Chater, 1971). Under these criteria, there are only around 30 vascular plant species from 12 families that could be considered bipolar (Appendix 22 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction S1). Species circumscription in some of these cases are still poorly understood, therefore, some of them might leave this list after a taxonomic revision, whereas some other might join it after we gain a broader taxonomic knowledge on the Floras of both hemispheres. From the compilation of bipolar species by Moore & Chater (1971), there are currently at least seven species whose bipolar distribution is suspected to have an anthropogenic origin in one of the Hemispheres (Appendix S1). The families with the largest number of bipolar species are Poaceae Barnhart (8 species, 26.7%) and Cyperaceae Juss. (6 species, 20%); and the genus with the greatest number of bipolar species is Carex L. (6 species, 20%; Appendix S1). The majority of the bipolar species lacks molecular studies comparing Northern and Southern Hemisphere populations. With the exception of the Carex bipolar species, none of the molecular studies concerning the remaining species have addressed specifically their bipolar distribution. The following studies have included at least one population from both hemispheres: Hymenophyllum tunbrigense (L.) Sm. (Hennequin et al., 2010), Anemone multifida Poir (Ehrendorfer et al., 2009; Mlinarec et al., 2012), Triglochin palustre L. (von Mering, 2013), Avenella flexuosa (L.) Dejer (it might be an introduction in South America; Chiapella, 2007) and Phleum alpinum L. (Boudko, 2014; see Appendix S1 for more details). Thus, these works could serve as a background to conduct more specific studies addressing the various hypotheses tested in bipolar distribution. Hypothesis tested in bipolar disjunctions Four hypotheses have historically been put forward to account for bipolar disjunctions: (1) stepwise long-distance dispersal across the equator and via mountain ranges (‘mountainhopping’; (Raven, 1963; Moore & Chater, 1971; Ball, 1990; Heide, 2002; Vollan et al., 23 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction 2006); (2) direct long-distance seed dispersal by birds, wind and/or ocean currents (Cruden, 1966; Muñoz et al., 2004; Nathan et al., 2008); (3) vicariance (Du Rietz, 1940), which implies a continuous distribution fragmentation dating back to the trans-tropical highland bridges during the Mesozoic Era (from the early Jurassic, 195 Ma; Scotese et al., 1988); and lastly, (4) convergent or parallel evolution of the disjunct populations (Scotland, 2011). Long-distance dispersal Darwin was so convinced by the hypothesis of migration over long-distances to account for species distributions, that he undertook a series of experiments to prove it (Darwin, 1859). Since Darwin, the effectiveness of long-distance methods of seed dispersal has been documented broadly (e.g. Murray, 1986; De Queiroz, 2005; Nogales et al., 2012; Vargas et al., 2012). Seed dispersion patterns near sources can be qualitatively different from those far from sources, because dispersal processes can operate over different ranges of distances (Nathan & Muller-Landau, 2000). Seed density around a mother plant almost invariably declines leptokurtically with distance (being more concentrated about the mean than the corresponding normal distribution), with an extended tail of long-distance dispersal (Harper, 1977; Willson, 1993; Nathan & Muller-Landau, 2000). The limited distances that most seeds travel are well documented for plants of all growth forms (e.g. Harper, 1977; Howe & Smallwood, 1982; Willson, 1993a; Cain et al., 1998). Empirical data is mostly acquired for short-distance events than for rare long-distance dispersal events, due to the difficulty of sampling the latter (Nathan and Muller-Landau, 2000). However, short-distance dispersals cannot explain some observed patterns of genetic structure (Cain et al., 2000) or range expansion rates (Clark, 1998) and therefore, long-distance dispersal deserve its own sampling effort. 24 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Typically, several dispersal agents are involved in long-distance dispersal (Gillespie et al., 2012), as Darwin suggested. Therefore, their seed shadows - the spatial distribution of seeds dispersed from a single plant (Nathan and Muller Landau, 2000)- are determined by the combined effects of displacement by all dispersal agents that move seeds from the parent plant (primary dispersal) or from subsequent locations (secondary dispersal). Wind current characteristics can be used to explain wind dispersal (e.g. distribution of plants in the Southern Hemisphere might be affected by the West Wind Drift, Sanmartín et al., 2007, and references therein); however, animal behaviour, which could depend upon many variables (e.g. abundances and characteristics of alternate food sources, competing species and predators), is typically more complex and it limits the understanding of zoochory (Nathan and Muller-Landau, 2000). For instance, among the birds that void or defecate viable seeds, the attributes that most influence seed dispersal are behavioural rather than morphological or physiological (e.g. Howe & Estabrook, 1977; Herrera, 1984a, 1984b). Some authors (Ouborg et al., 1999; Cain et al., 2000) have emphasized the potential of genetic methods that can provide evidence of long-distance gene flow, either by comparing the genotypes of seedlings with potential parents or by examining genetic structure within and among populations (Ouborg et al., 1999; Jordano & Godoy, 2000). Le Corre et al. (1997) showed that longdistance dispersal events influence the genetic differentiation of populations, leaving a genetic signature that could persist for long periods of time. Moreover, it has been recently showed that DNA barcoding can help to identify the source plant of the dispersed seeds and the frugivore species that contribute to each dispersal event (González-Varo et al., 2014), which has an extraordinary potential for characterizing long-distance dispersal in plants. 25 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Direct vs. mountain-hopping long-distance dispersal The main difference between direct and mountain-hopping long distance dispersal of plants is the number of “way stations” made before reaching the end of the dispersal process. In the bipolar disjunction, direct long-distance dispersal implies that the taxa have been carried from its source in one side of the disjunction to the other, without any stop between these areas. The mountain-hopping hypothesis (Ball, 1990) proposes a long-distance, stepwise migration of these taxa using mountains peaks as stepping-stones to cross the tropics. Means of dispersal in direct long-distance dispersal events could be the same as in mountain-hopping ones. Vicariance Vicariance is defined as the splitting of the continuous geographical range of a group into two or more parts by the development of some sort of barrier (or barriers) to dispersal (de Queiroz, 2005). The fossil record can be used to evaluate vicariance and dispersal hypotheses by dating lineage divergences (nodes). In dated phylogenetic reconstructions, we encounter two categories of results: (1) a particular evolutionary branching point is estimated to be as old as or older than the fragmentation event in question, that node is supporting a vicariant event; (2) a branching point is estimated to be younger than the fragmentation event, then, it is supporting long-distance dispersal. The biogeographic history of the Southern Hemisphere is considered a prime example of the vicariance scenario (Sanmartín & Ronquist, 2004). The disjunct trans-Pacific distributions have been proposed to stem from the sequential breakup of the southern supercontinent Gondwana during the last 165 million years. This hypothesis has been long tested in angiosperm groups with Southern Hemisphere distributions (reviewed in Beaulieu et al., 2013) and it has been supported in some plant groups [e.g. in the genus 26 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Gunnera (Gunneraceae), Wanntorp & Wanntorp, 2003; in the family Myrtaceae, Sytsma et al., 2004]. Although dispersal and vicariance are often considered competing hypotheses in biogeography (Sanmartín and Ronquist, 2004), both are usually claimed to explain Southern Hemisphere plant distribution (e.g. Nothofagus, Knapp et al., 2005). For bipolar species, we consider the fragmentation of a continuous distribution dating back to the trans-tropical highland bridges during the Mesozoic Era (from the early Jurassic, 195-200 Ma; Scotese et al., 1988; Figure 3). During this time, bipolar species could have had a continuous distribution from high latitudes in the Northern Hemisphere to high latitudes in the Southern Hemisphere. Figure 3. Landmasses in the early Jurassic (ca. 200 Ma; photo taken from Scotese (2004). After an episode of igneous activity along the east coast of North America and the northwest coast of Africa, the central Atlantic Ocean opened as North America moved to the northwest. This movement also gave rise to the Gulf of Mexico as North America moved away from South America (Scotese, 2002). 27 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Convergent and parallel evolution Traditionally, ‘convergent’ has been distinguished from ‘parallel’ evolution as the first assumes that when a given phenotype evolves, the underlying genetic mechanisms are different in distantly related species (convergent evolution; Haldane, 1932) but similar in closely related species (parallel evolution; Haldane 1932). There is still a huge debate between parallel evolution and convergence (e.g. (Wichman et al., 1999; Cooper et al., 2003; Fong et al., 2005; Christin et al., 2007; Scotland, 2011). If we assume that homoplasy can be seen as convergence in a broad sense, then pheonotypic homoplasy can be described as convergence and genotypic homoplasy as parallelism (Scotland, 2011). However, Stern (2013; and references therein) showed, on one hand, several examples where the same phenotype (e.g. coloration in lizards) might evolve among populations within a species by changes in different genes; on the other hand, he showed examples of similar phenotypes that might have evolved in distantly related species by changes in the same gene. Therefore, it is argued that ‘convergent’ and ‘parallel’ evolution represents ends of a continuum and both can be described with a single term – convergent evolution (Stern, 2013). For bipolar taxa, we will consider convergent or parallel evolution as synonym hypotheses that can be rejected is taxa are retrieved as monophyletic. Molecular markers for biogeographical studies and the need of divergence analyses When conducting studies in biogeography, ordered markers (DNA sequences) are preferred rather than unordered ones (e.g. AFLP, ISSR, RAPD) because the first contain records of their own histories and provide information about genealogical relationships (e.g. Schaal & Olsen, 2000; Schaal & Leverich, 2001). 28 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction The chloroplast genome has a lower degree of polymorphism than the nuclear genome (Muse, 2000), however, it can uncover a higher degree of genetic structure. In the chloroplast genome, genetic drift occurs more rapidly than in the nuclear because it has a lower effective population size (Louis et al., 1998); thus, genetic drift result in greater genetic differentiation of fragmented populations, retaining molecular signal of past migrations, dispersal events and range fragmentation (e.g. Louis et al., 1998; Newton et al., 1999; Hudson & Coyne, 2002; Rendell & Ennos, 2003; Kadereit et al., 2005; Petit et al., 2005). This difference is due to the uniparental inheritance of chloroplast DNA (cpDNA), which is maternally inherited in most angiosperms (Harris & Ingram, 1991). In plant biogeographical studies, as colonization of new habitats commonly occurs through seeds, the pattern of dispersal is unaffected by subsequent pollen movements and may be traced with cpDNA markers (Petit et al., 2003). Moreover, the chloroplast genome is represented by only one DNA molecule where recombination processes are scarce. Conversely, nuclear markers may contain multiple different regions of the nuclear genome with more frequent recombination events between those regions. Therefore, nuclear markers are generally more useful for exploring the recent history of taxa and gene flow patterns of species (Harpending et al., 1998). Finally, next-generation sequencing techniques (e.g. restriction-site associated DNA; Baird et al., 2008) are now being used in biogeographic studies (e.g. Emerson et al., 2010; Lexer et al., 2013). Divergence time analysis and the use of local molecular clocks is now a basic tool in biogeography (Givnish & Renner, 2004). It has allowed to test different hypothesis in plant disjunctions (e.g. Winkworth et al., 2002; Sytsma et al., 2004; Wen & Ickert-Bond, 2009; Nie et al., 2012) and discern between dispersal or vicariance, the two main hypotheses tested in biogeography, in many different groups of angiosperms (e.g. Malpighiaceae, Davis et al., 2002; Moraceae, Zerega et al., 2005; Ephedra, Ickert-Bond et al., 2009). These studies are 29 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction typically supported by fossil records which are ideal to estimate the ages of lineages (acting as calibration points) and to support their presence in particular places (Renner, 2005). However, there are many plant groups lacking reliable fossil records and, therefore, secondary calibrations are broadly used (e.g. (Valente et al., 2011; Fernández-Mendoza & Printzen, 2013; Pimentel et al., 2013; Inda et al., 2014). In the case of bipolar species, divergence time estimates can help to elucidate between the different hypotheses tested. Carex (Cyperaceae), the genus with the greatest number of bipolar species One of the families with the largest number of bipolar species is the Cyperaceae. The sedge family is also among the largest families of flowering plants, occurring on all continents, except Antarctica. It comprises approximately 104 genera, 14 tribes and 5,400 species (Goetghebeur, 1996) making it the 7th or 8th largest angiosperm family and the third largest monocot family after orchids (Orchidaceae Juss.) and grasses (Poaceae). Its species occur in a great diversity of habitats, ranging from deserts to rainforests (Reznicek, 2011), although they are predominantly found in wetland habitats such as littoral communities, peat-lands and wet meadows. Although its economic significance is often at a regional or local level (Simpson & Inglis, 2001), approximately 10% of its species are used by humanity for food (Chinese water chestnut, Eleocharis dulcis (Burm.) f. Trin. ex Henschel, or the yellow nut sedge, Cyperus esculentus L.); for pasture (Carex lyngbyei Hornem.); for construction (Schoenoplectus californicus (C.A. Mey) Palla); as an elixir (Carex arenaria L.); and even for making paper (Cyperus papyrus L.), whereas other sedge species, such as Cyperus rotundus L., C. esculentus L., C. difformis or Fimbristylis miliacea L. are considered to be serious weeds due to their negative effect on agriculture (Brayson & Carter, 2008). 30 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Sedge flowers are highly small and evolutionary reduced in size typically with the perianth lacking or reduced to either bristles or scales. In Carex, a modified bract in the female flower surrounds the naked gynoecium, enclosing the pistil and later the achene, in a sac-like structure (Blaser, 1944); known as utricle or perigynium. The flowers are arranged in structures known as spikelets with the inflorescence consisting of one or many spikelets arranged on one or more axes. Approximately 40% of all sedge species (ca. 2100 spp.) are grouped in the cosmopolitan tribe Cariceae Kunth ex Dumort., which has been suggested by most studies to be sister to tribe Scirpeae or nested within it (e.g. Muasya & Simpson, 1998; Muasya et al., 2009; Escudero & Hipp, 2013; Hinchliff & Roalson, 2013; Jung & Choi, 2013; Léveillé-bourret et al., 2014). (Waterway and Starr (2007), using DNA from both nuclear and plastid genomes, revealed three major clades within Cariceae that roughly corresponded to: (1) subgenus Vignea, hence named Vignea clade; (2) subgenera Carex and Vigneastra, named the Core Carex clade; and (3) most unispicate Carex species plus Cymophyllus, Kobresia, Schoenoxiphium, and Uncinia, named the Caricoid clade (Figure 3). Later on, Waterway et al., (2009) found that section Siderostictae Franch. ex Ohwi, traditionally classified in subgenus Carex, formed, together with the Hypolytroides clade (Starr et al., 2015), a clade sister to all other species in tribe Cariceae; it confirmed that Carex was a paraphyletic group with all other genera of tribe Cariceae nested within it. For these reasons, it has been recently agreed by the (Global Carex Group, 2015) to consider a new broader circumscription of Carex, changing its classification by unifying all genera within it. 31 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Figure 4. Generalized phylogenetic tree of Cyperaceae tribe Cariceae based on molecular phylogenetic studies to date (modified from Global Carex Group, 2015). Solid lines show relationships that are supported by all or most studies; dotted branches show relationships that are frequently seen but more inconsistent among studies; branches with consistently high boostrap support are indicated with a grey filled circle. Therefore, the cosmopolitan genus Carex, the most diverse angiosperm genus of the northern temperate zone (Escudero et al., 2012b) is the largest genus in the family and it is also one of the most taxonomically difficult (Starr & Ford, 2009) due to its complex and extremely reduced morphology. Different potential drivers of diversification have been proposed to contribute to the extraordinary diversity of Carex [e.g. self-compatibility and high selfing 32 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction rates (Arens et al., 2005; Friedman & Barrett, 2009; Escudero et al., 2010b) or chromosome differentiation (Whitkus, 1988; Hipp, 2007; Escudero et al., 2010b, 2012a, 2012b, 2013a, 2013b; Hipp et al., 2010; Jiménez-Mejías et al., 2012)]. A comprehensive, global taxonomic treatment of the genus is still lacking, and new species continue to be described. Thus, in the last 20 years, the discovery rate of new Carex species in North America has been, on average, two per year (Starr & Ford, 2008), which seems to be a trend that has not yet reached a plateau. There are six bipolar Carex species (Figure 5): Carex arctogena Harry Sm., C. canescens L., C. macloviana D’Urv., C. magellanica Lam., C. maritima Gunn. and C. microglochin Wahlenb. These species are placed in different lineages within the genus. In the clade Caricoid, there is C. arctogena and C. microglochin; in the Vignea clade, C. canescens, C. macloviana, C. maritima; and in the core Carex clade, C. magellanica. Therefore, this extraordinary geographic disjunction seems to have been achieved independently by Carex species from different evolutionary lineages. None of this species but C. microglochin present specialized dispersal devices (a ‘hook’ used for ectozoochory; Savile, 1972); however, it has been proved that, for instance, epizoic dispersal occurs in other Carex species without having evident morphological features for it (reviewed in Allessio Leck & Schütz, 2005). Carex bipolar species generally have a circumboreal distribution and are limited to austral latitudes in South America (>52º; Figure 5). An exception is C. canescens (sect. Glareosae G. Don), the single bipolar Carex species that reaches not only the southernmost region of South America (Tierra del Fuego and Falkland Islands) but also Oceania (including Australia, Tasmania and New Guinea; Figure 1 and Appendix S1), occurring within five biogeographical regions (Nearctic, Palearctic, Andean, Neoguinean and Australotemperate; Morrone, 2002). Carex canescens is therefore the bipolar Carex species with the widest 33 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction distribution followed by C. maritima, which has a circumboreal distribution including the European Alps and the Himalayas in the Northern Hemisphere, while in the Southern Hemisphere it is distributed from Ecuador to Patagonia (Govaerts et al., 2014). All species but C. arctogena were studied molecularly by Vollan et al. (2006) and Escudero et al. (2010a), although with a limited sampling. Both studies found low levels of genetic differentiation between populations from different Hemispheres, suggesting that either mountain-hopping or direct long-distance dispersal was the best explanation for the species’ current distributions. However, neither Vollan et al. (2006) nor Escudero et al. (2010) could determine definitively which hypothesis best explained the distributions of bipolar species. 34 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Figure 5. Distribution maps of the six bipolar Carex species. (a) Carex arctogena; (b) C. canescens; (c) C. macloviana; (d) C. magellanica; (e) C. marítima; and (f) C. microglochin. The dark grey regions indicate the distribution obtained from the World Checklist of Selected Plant Families (http://apps.kew.org/wcsp). 35 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Objectives by chapters 1. The main goal of Chapter 2 was to resolve taxonomic problems within the C. capitata complex, especially in relation to the status of the different taxa described within this complex. Morphological, micromorphological, ecological and geographical data are studied using more than 450 herbarium specimens. 2. The goal of Chapter 3 was to determine which of the four classic hypotheses used to account for bipolar taxa could best explain the distribution of C. arctogena. By evaluating the combined evidence provided by phylogenetic reconstructions and molecular dating based on nuclear and plastid data together with bioclimatic data through species’ distribution, biogeographical hypotheses were tested, improving our understanding of the historical events that promoted the formation of the bipolar disjunction seen in C. arctogena. 3. The aim of Chapter 4 was to explain the bipolar distribution of C. maritima. Specifically, the aims were: (i) to clarify the direction of the dispersal (north-to-south or south-to-north); (ii) in the case of genetic structure, to estimate the timing of dispersal; and (iii) to test mountain-hopping and direct long-dispersal hypotheses, as well as the relationship of C. maritima with biotic and abiotic factors that could explain the bipolar distribution. In order to accomplish this task data on nuclear and plastid molecular markers and bioclimatic data were combined. Carex maritima populations were analysed phylogenetic, phylogeographically and ecologically through its distribution. 36 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction 4. The aims of Chapter 5 were to: (i) test the various hypotheses accounting for the bipolar disjunction of C. canescens; and (ii) to determine whether C. canescens migrated twice to the Southern Hemisphere or was dispersed from South America to Australia or vice versa. Phylogenetic reconstructions and phylogeographical analyses (based on nuclear and plastid regions) as well as bioclimatic data were evaluated in the total distribution of the species. 5. In Chapter 6, the objectives were to: (i) to review the hypotheses tested in bipolar distribution; (ii) to infer the most common direction of dispersal in bipolar species; (iii) to discuss about the possible means of dispersal that could have promoted bipolar distribution; and (iv) to highlight the possible characteristics of the bipolar species that have made them successful in establishment after dispersal. 37 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction REFERENCES Allessio Leck M. & Schütz W. (2005) Regeneration of Cyperaceae, with particular reference to seed ecology and seed banks. Perspectives in Plant Ecology, Evolution and Systematics, 7, 95–133. Arens P., Bijlsma R.-J., van’t Westende W., van Os B., Smulders M.J.M., & Vosman B. (2005) Genetic structure in populations of an ancient woodland sedge, Carex sylvatica Hudson, at a regional and local scale. Plant Biology, 7, 387–396. Avise J.C. (2000) Phylogeography: the history and formation of species. Harvard University Press, Cambridge, MA. Baird N.A., Etter P.D., Atwood T.S., Currey M.C., Shiver A.L., Lewis Z.A., Selker E.U., Cresko W.A., & Johnson E.A. (2008) Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS ONE, 3, 1–7. Ball P.W. (1990) Some aspects of the phytogeography of Carex. Canadian Journal of Botany, 68, 1462–1472. Beaulieu J.M., Tank D.C., & Donoghue M.J. (2013) A Southern Hemisphere origin for campanulid angiosperms, with traces of the break-up of Gondwana. BMC evolutionary biology, 13, 80. Blaser H.W. (1944) Studies in the morphology of the Cyperaceae. II. The prophyll. American Journal of Botany, 31, 53–64. Boudko E. (2014) Phylogenetic analysis of subtribe Alopecurinae sensu lato (Poaceae). University of Ottawa, Brayson C.T. & Carter R. (2008) The significance of Cyperaceae as weeds. (ed. by R.F.C. Naczi and B.A. Ford), pp. 15–101. Missouri Botanical Garden, Brown J.H. & Lomolino M. V (2011) Independent Discovery of the Equilibrium Theory of Island Biogeography. Ecology, 70, 1954–1957. Cain M.L., Damman H., & Muir A. (1998) Seed disperal and the Holocene migration. Ecological Monographs, 68, 325–347. Cain M.L., Milligan B.G., & Strand A.E. (2000) Long-distance seed dispersal in plant populations. American Journal of Botany, 87, 1217–1227. Chiapella J. (2007) A molecular phylogenetic study of Deschampsia (Poaceae: Aveneae) inferred from nuclear ITS and plastid trnL sequence data: Support for the recognition of Avenella and Vahlodea. Taxon, 56, 55–64. Christin P.-A., Salamin N., Savolainen V., Duvall M.R., & Besnard G. (2007) C4 Photosynthesis evolved in grasses via parallel adaptive genetic changes. Current biology : CB, 17, 1241–1247. 38 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Clark J.S. (1998) Why trees migrate so fast: confronting theory with dispersal biology and the paleorecord. The American Naturalist, 152, 204–224. Cooper T.F., Rozen D.E., & Lenski R.E. (2003) Parallel changes in gene expression after 20,000 generations of evolution in Escherichiacoli. Proceedings of the National Academy of Sciences of the United States of America, 100, 1072–1077. Le Corre V., Machon N., Petit R.J., & Kremer A. (1997) Colonization with long-distance seed dispersal and genetic structure of maternally inherited genes in forest trees: a simulation study. Genetical Research, 69, 117–125. Crisci J. V. (2001) The voice of historical biogeography. 28, 157–168. Cruden R.W. (1966) Birds as agents of long-distance dispersal for disjunct plant groups of the temperate western hemisphere. Evolution, 20, 517–532. Darwin C. (1859) On the origin of species by means of natural selection. London, UK. Davis C.C., Bell C.D., Mathews S., & Donoghue M.J. (2002) Laurasian migration explains Gondwanan disjunctions: Evidence from Malpighiaceae. Proceedings of the National Academy of Sciences of the United States of America, 99, 6833–6837. Degnan J.H. & Rosenberg N. a. (2009) Gene tree discordance, phylogenetic inference and the multispecies coalescent. Trends in Ecology and Evolution, 24, 332–340. Ehrendorfer F., Ziman S.N., König C., Keener C.S., Dutton B.E., Tsarenko O.N., Bulakh E. V., Boşcaiu M., Médail F., & Kästner A. (2009) Taxonomic revision, phylogenetics and transcontinental distribution of Anemone section Anemone (Ranunculaceae). Botanical Journal of the Linnean Society, 160, 312–354. Emerson K.J., Merz C.R., Catchen J.M., Hohenlohe P.A., Cresko W.A., Bradshaw W.E., & Holzapfel C.M. (2010) Resolving postglacial phylogeography using high-throughput sequencing. . Escudero M. & Hipp A. (2013) Shifts in diversification rates and clade ages explain species richness in higher-level sedge taxa (Cyperaceae). American Journal of Botany, 100, 1–9. Escudero M., Hipp A.L., Hansen T.F., Voje K.L., & Luceño M. (2012a) Selection and inertia in the evolution of holocentric chromosomes in sedges (Carex, Cyperaceae). The New phytologist, 195, 237–247. Escudero M., Hipp A.L., Waterway M.J., & Valente L.M. (2012b) Diversification rates and chromosome evolution in the most diverse angiosperm genus of the temperate zone (Carex, Cyperaceae). Molecular Phylogenetics and Evolution, 63, 650–655. Escudero M., Maguilla E., & Luceño M. (2013a) Selection by climatic regime and neutral evolutionary processes in holocentric chromosomes (Carex gr. laevigata: Cyperaceae): A microevolutionary approach. Perspectives in Plant Ecology, Evolution and Systematics, 15, 118–129. 39 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Escudero M., Valcárcel V., Vargas P., & Luceño M. (2010a) Bipolar disjunctions in Carex: Long-distance dispersal, vicariance, or parallel evolution? Flora, 205, 118–127. Escudero M., Vargas P., Arens P., Ouborg N.J., & Luceño M. (2010b) The east-west-north colonization history of the Mediterranean and Europe by the coastal plant Carex extensa (Cyperaceae). Molecular Ecology, 19, 352–370. Escudero M., Weber J. a., & Hipp A.L. (2013b) Species coherence in the face of karyotype diversification in holocentric organisms: the case of a cytogenetically variable sedge (Carex scoparia, Cyperaceae). Annals of Botany, 112, 515–526. Fernández-Mendoza F. & Printzen C. (2013) Pleistocene expansion of the bipolar lichen Cetraria aculeata into the Southern hemisphere. Molecular Ecology, 22, 1961–1983. Fong S.S., Joyce A.R., & Palsson B.Ø. (2005) Parallel adaptive evolution cultures of Escherichia coli lead to convergent growth phenotypes with different gene expression states. Genome Research, 15, 1365–1372. Friedman J. & Barrett S.C.H. (2009) The consequences of monoecy and protogyny for mating in wind-pollinated Carex. New Phytologist, 489–497. Giller P.S., Myers A.A., & Riddle B.R. (2004) Earth history, vicariance, and dispersal. Foundations of Biogeography: classic papers with commentaries (ed. by M. V Lomolino, D.P. Sax, and J.H. Brown), pp. 267–276. University of Chicago Press Ldt, London. Gillespie R.G., Baldwin B.G., Waters J.M., Fraser C.I., Nikula R., & Roderick G.K. (2012) Long-distance dispersal: a framework for hypothesis testing. Trends in Ecology and Evolution, 27, 47–56. Givnish T.J. & Renner S.S. (2004) Tropical Intercontinental Disjunctions: Gondwana Breakup, Immigration from the Boreotropics, and Transoceanic dispersal. International Journal of Plant Sciences, 165, S1–S6. Global Carex Group (2015) Making Carex monophyletic: a new broader circumscription. Botanical Journal of the Linnean Society, in press, . Goetghebeur P. (1996) The families and genera of vascular plants. IV Flowering plants Monocotyledons. (ed. by K. Kubitzki), pp. 164. Springer, González-Varo J.P., Arroyo J.M., & Jordano P. (2014) Who dispersed the seeds? The use of DNA barcoding in frugivory and seed dispersal studies. Methods in Ecology and Evolution, 5, 806–814. Govaerts R., Simpson D., Wilson K., Egorova T., Koopman J., & Bruhl J. (2014) Haldane J.B.S. (1932) The Causes of Evolution. Princeton Science Library, 40 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Harpending H.C., Batzer M. a, Gurven M., Jorde L.B., Rogers a R., & Sherry S.T. (1998) Genetic traces of ancient demography. Proceedings of the National Academy of Sciences of the United States of America, 95, 1961–1967. Harper J.L. (1977) Population Biology of Plants. Academic Press, Harris S. a & Ingram R. (1991) Chloroplast DNA and Biosystematics: The Effects of Intraspecific Diversity and Plastid Transmission. Taxon, 40, 393–412. Heide O.M. (2002) Climatic flowering requirements of bipolar sedges Carex spp. and the feasibility of their trans-equatorial migration by mountain-hopping. Oikos, 99, 352–362. Hennequin S., Ebihara A., Dubuisson J.Y., & Schneider H. (2010) Chromosome number evolution in Hymenophyllum (Hymenophyllaceae), with special reference to the subgenus Hymenophyllum. Molecular Phylogenetics and Evolution, 55, 47–59. Herrera C.M. (1984a) Seed dispersal and fitness determinants in wild rose: Combined effects of hawthorn, birds, mice, and browsing ungulates. Oecologia, 63, 386–393. Herrera M. (1984b) A study of avian frugivores, bird-dispersed plants, and their interaction in mediterranean scrublands. Ecological Monographs, 54, 1–23. Hinchliff C.E. & Roalson E.H. (2013) Using supermatrices for phylogenetic inquiry: an example using the sedges. Systematic Biology, 62, 205–219. Hipp A. (2007) Nonuniform processes of chromosome evolution in sedges (Carex: Cyperaceae). Evolution, 61, 2175–2194. Hipp A.L., Rothrock P.E., Whitkus R., & Weber J.A. (2010) Chromosomes tell half of the story: The correlation between karyotype rearrangements and genetic diversity in sedges, a group with holocentric chromosomes. Molecular Ecology, 19, 3124–3138. Howe H.F. & Estabrook G.F. (1977) On Intraspecific Competition for Avian Dispersers in Tropical Trees. The American Naturalist, 111, 817–832. Howe H.F. & Smallwood J. (1982) Ecology of Seed Dispersal. Annual Review of Ecology and Systematics, 13, 201–228. Hudson R.R. & Coyne J.A. (2002) Mathematical consequences of the genealogical species concept. Evolution, 56, 1557–1565. Ickert-Bond S.M., Rydin C., & Renner S.S. (2009) A fossil-calibrated relaxed clock for Ephedra indicates an Oligocene age for the divergence of Asian and New World clades and Miocene dispersal into South America. Journal of Systematics and Evolution, 47, 444–456. Inda L.A., Sanmartín I., Buerki S., & Catalán P. (2014) Mediterranean origin and MioceneHolocene Old World diversification of meadow fescues and ryegrasses (Festuca subgenus Schedonorus and Lolium). Journal of Biogeography, 41, 600–614. 41 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Jablonski D., Flessa K.W., & Valentine J.W. (1985) Biogeography and paleobiology. Paleobiology, 11, 75–90. Jiménez-Mejías P., Luceño M., Lye K.A., Brochmann C., & Gussarova G. (2012) Genetically diverse but with surprisingly little geographical structure: The complex history of the widespread herb carex nigra (cyperaceae). Journal of Biogeography, 39, 2279–2291. Jordano P. & Godoy J.A. (2000) RAPD variation and population genetic structure in Prunus mahaleb (Rosaceae), an animal-dispersed tree. Molecular Ecology, 9, 1293–1305. Jung J. & Choi H.-K. (2013) Recognition of two major clades and early diverged groups within the subfamily Cyperoideae (Cyperaceae) including Korean sedges. Journal of plant research, 126, 335–49. Kadereit J.W., Arafeh R., Somogyi G., & Westberg E. (2005) Terrestrial growth and marine dispersal? Comparative phylogeography of five coastal plant species at a European scale. Taxon, 54, 861–876. Knapp M., Stöckler K., Havell D., Delsuc F., Sebastiani F., & Lockhart P.J. (2005) Relaxed molecular clock provides evidence for long-distance dispersal of Nothofagus (southern beech). PLoS Biology, 3, . Léveillé-bourret É., Gilmour C.N., Starr J.R., Naczi R.F.C., Spalink D., & Sytsma K.J. (2014) Searching for the sister to sedges ( Carex ): resolving relationships in the Cariceae-Dulichieae-Scirpeae clade ( Cyperaceae ). . Lexer C., Mangili S., Bossolini E., Forest F., Stölting K.N., Pearman P.B., Zimmermann N.E., & Salamin N. (2013) “Next generation” biogeography: Towards understanding the drivers of species diversification and persistence. Journal of Biogeography, 40, 1013– 1022. Louis S., Schaal B.A., Hayworth D.A., Olsen K.M., Rauscher J.T., & Smith W.A. (1998) Phylogeographic studies in plants: Problems and prospects. Molecular Ecology, 7, 465– 474. Von Mering S. (2013) Systematics, phylogeny and biogeography of Juncaginaceae. Johannes Gutenberg-Universität Mainz, Mlinarec J., Šatović Z., Malenica N., Ivančić-Baće I., & Besendorfer V. (2012) Evolution of the tetraploid Anemone multifida (2n = 32) and hexaploid A. baldensis (2n = 48) (Ranunculaceae) was accompanied by rDNA loci loss and intergenomic translocation: evidence for their common genome origin. Annals of Botany, 110, 703–712. Moore D.M. & Chater A.O. (1971) Studies on bipolar species I. Carex. Botaniska Notiser, 124, 317–334. Morrone J.J. (2002) Biogeographical regions under track and cladistic scrutiny. Journal of Biogeography, 29, 149–152. 42 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Morrone J.J. (2009) Evolutionary Biogeography: An Integrative Approach with Case Studies. Columbia Univ. Press, Muasya A. & Simpson D. (1998) An assessment of suprageneric phylogeny in Cyperaceae usingrbcL DNA sequences. Plant Systematics and …, 211, 257–271. Muasya A.M., Vrijdaghs A., Simpson D.A., Chase M.W., Goetghebeur P., & Smets E. (2009) What is a Genus in Cypereae: Phylogeny, Character Homology Assessment and Generic Circumscription in Cypereae. Botanical Review, 75, 52–66. Muñoz J., Felicísimo A.M., Cabezas F., Burgaz A.R., & Martínez I. (2004) Wind as a longdistance dispersal vehicle in the Southern Hemisphere. Science, 304, 1144–1147. Murray D.R. (1986) Seed Dispersal. Academic Press, Orlando, FO. Muse S. V. (2000) Examining rates and patterns of nucleotide substitution in plants. Plant Molecular Biology, 42, 25–43. Myers A.A. & Giller P.S. (1988) Analytical Biogeography. An integrated approach to the study of animal and plant distributions. Champan and Hall Ltd, London, New York. Nathan R. & Muller-Landau H. (2000) Spatial patterns of seed dispersal, their determinants and consequences for recruitment. Trends in Ecology and Evolution, 15, 278. Nathan R., Schurr F.M., Spiegel O., Steinitz O., Trakhtenbrot A., & Tsoar A. (2008) Mechanisms of long-distance seed dispersal. Trends in Ecology and Evolution, 23, 638– 647. Newton A.C., Allnutt T.R., & Gillies A.C.M. (1999) Molecular phylogeography, intraspecific variation and the conservation of tree species. Trends in Ecology & …, 14, 140–145. Nie Z.-L., Sun H., Manchester S.R., Meng Y., Luke Q., & Wen J. (2012) Evolution of the intercontinental disjunctions in six continents in the Ampelopsis clade of the grape family (Vitaceae). BMC Evolutionary Biology, 12, 17. Nogales M., Heleno R., Traveset A., & Vargas P. (2012) Evidence for overlooked mechanisms of long-distance seed dispersal to and between oceanic islands. New Phytologist, 194, 313–317. Ouborg N.J., Piquot Y., & Van Groenendael J.M. (1999) Population genetics, molecular markers and the study of dispersal in plants coalescence, dispersal, gene flow, isolation by distance, paternity analysis, pollen-to-seed-migration ratio. Journal of Ecology, 87, 551–568. Petit R.J., Aguinagalde I., de Beaulieu J.-L., Bittkau C., Brewer S., Cheddadi R., Ennos R., Fineschi S., Grivet D., Lascoux M., Mohanty A., Müller-Starck G., Demesure-Musch B., Palmé A., Martín J.P., Rendell S., & Vendramin G.G. (2003) Glacial refugia: hotspots but not melting pots of genetic diversity. Science, 300, 1563–1565. 43 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Petit R.J., Duminil J., Fineschi S., Hampe A., Salvini D., & Vendramin G.G. (2005) Comparative organization of chloroplast, mitochondrial and nuclear diversity in plant populations. Molecular Ecology, 14, 689–701. Pimentel M., Sahuquillo E., Torrecilla Z., Popp M., Catalán P., & Brochmann C. (2013) Hybridization and long-distance colonization at different time scales: Towards resolution of long-term controversies in the sweet vernal grasses (Anthoxanthum). Annals of Botany, 112, 1015–1030. De Queiroz A. (2005) The resurrection of oceanic dispersal in historical biogeography. Trends in Ecology and Evolution, 20, 68–73. Raven P.H. (1963) Amphitropical Relationships in the Floras of North and South America. The Quarterly Review of Biology, 38, 151–177. Rendell S. & Ennos R.A. (2003) Chloroplast DNA diversity of the dioecious European tree Ilex aqyufolium L. (English holly). Molecular Ecology, 12, 2681–2688. Renner S.S. (2005) Relaxed molecular clocks for dating historical plant dispersal events. Trends in plant science, 10, 550–8. Reznicek A.A. (2011) Cyperaceae. (ed. by W.L. Hosch, D. Mahajan, and A. Tikkanen), Encyclopaedia Britannica, Riddle B.R. & Hafner D.J. (2004) The past and future roles of phylogeography in historical biogeography. Frontiers of Biogeography (ed. by M. V. Lomolino and L.R. Heaney), pp. 93–110. Sinauer Associates, Inc., Sunderland, MA. Du Rietz G.E. (1940) Problems of the bipolar plant distribution. Acta Phytogeographica Suecica, 13, 215–282. Sanmartín I. (2012). Biogeografía. In: El árbol de la vida: sistemática y evolución de los seres vivos (ed. by P. Vargas and R. Zardoya),Museo de Ciencias Naturales, pp. 457474. Madrid, Spain. Sanmartín I. & Ronquist F. (2004) Southern hemisphere biogeography inferred by eventbased models: plant versus animal patterns. Systematic Biology, 53, 216–243. Savile D.B.O. (1972) Arctic adaptations in plants. Monograph No. 6. Canada Department of Agriculture Research Branch, Ottawa. Schaal B.A. & Leverich W.J. (2001) Plant population biology and systematics. Taxon, 50, 679–695. Schaal B.A. & Olsen K.M. (2000) Gene genealogies and population variation in plants. Proceedings of the National Academy of Sciences of the United States of America, 97, 7024–7029. Scotese C.R. (2002) PALEOMAP website. http://www.scotese.com. 44 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Scotese C.R. (2004) A Continental Drift Flipbook. The Journal of Geology, 112, 729–741. Scotese C., Gahagan L., & Larson R. (1988) Plate tectonic reconstructions of the Cretaceous and Cenozoic ocean basins. Tectonophysics, 155, 27–48. Scotland R.W. (2011) What is parallelism? Evolution & Development, 13, 214–427. Simpson D.A. & Inglis C.A. (2001) Cyperaceae of economic, ethnobotanical and horticultural importance: a checklist. Kew Bulletin, 56, 257–360. Starr J.R. & Ford B.A. (2008) Phylogeny and Evolution in Cariceae (Cyperaceae): Current Knowledge and Future Directions. The Botanical Review, 75, 110–137. Starr J.R. & Ford B.A. (2009) Phylogeny and Evolution in Cariceae (Cyperaceae): Current Knowledge and Future Directions. The Botanical Review, 75, 110–137. Starr J.R., Janzen F.H., & Ford B. a. (2015) Three new, early diverging Carex (Cariceae, Cyperaceae) lineages from East and Southeast Asia with important evolutionary and biogeographic implications. Molecular Phylogenetics and Evolution, . Stern D.L. (2013) The genetic causes of convergent evolution. Nature Reviews Genetics, 14, 751–764. Sytsma K.J., Litt A., Zjhra M.L., Chris Pires J., Nepokroeff M., Conti E., Walker J., & Wilson P.G. (2004) Clades, Clocks, and Continents: Historical and Biogeographical Analysis of Myrtaceae, Vochysiaceae, and Relatives in the Southern Hemisphere. International Journal of Plant Sciences, 165, S85–S105. Valente L.M., Savolainen V., Manning J.C., Goldblatt P., & Vargas P. (2011) Explaining disparities in species richness between Mediterranean floristic regions: A case study in Gladiolus (Iridaceae). Global Ecology and Biogeography, 20, 881–892. Vargas P., Heleno R., Traveset a., & Nogales M. (2012) Colonization of the Gal??pagos Islands by plants with no specific syndromes for long-distance dispersal: A new perspective. Ecography, 35, 33–43. Vollan K., Heide O.M., Lye K. a., & Heun M. (2006) Genetic variation, taxonomy and mountain-hopping of four bipolar Carex species (Cyperaceae) analysed by AFLP fingerprinting. Australian Journal of Botany, 54, 305–313. Wanntorp L. & Wanntorp H.-E. (2003) The biogeography of Gunnera L.: vicariance and dispersal. Journal of Biogeography, 30, 979–987. Waterway M.J., Hoshino T., & Masaki T. (2009) Phylogeny, Species Richness, and Ecological Specialization in Cyperaceae Tribe Cariceae. The Botanical Review, 75, 138– 159. Waterway M.J. & Starr J.R. (2007) Phylogenetic relationships in tribe Cariceae (Cyperaceae) based on nested analyses of four molecular data sets. Pages 165-192 in J. T. Columbus, E. A. Friar, C. W. Hamilton, J. M. Porter, L. M. Prince, & M.G. Simpson, 33, 125–160. 45 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Wen J. & Ickert-Bond S.M. (2009) Evolution of the Madrean-Tethyan disjunctions and the North and South American amphitropical disjunctions in plants. Journal of Systematics and Evolution, 47, 331–348. Whitkus R. (1988) Experimental hybridization among chromosome races of Carex pachystachya and the related species Carex macloviana and Carex preslii (Cyperaceae). Systematic Botany, 13, 146–153. Wichman H. A, Badgett M.R., Scott L. A, Boulianne C.M., & Bull J.J. (1999) Different trajectories of parallel evolution during viral adaptation. Science (New York, N.Y.), 285, 422–424. Willson M.F. (1993) Dispersal mode, seed shadows, and colonization patterns. Vegetatio, 107, 261–280. Winkworth R.C., Wagstaff S.J., Glenny D., & Lockhart P.J. (2002) Plant dispersal N.E.W.S from New Zealand. Trends in Ecology and Evolution, 17, 514–520. Zerega N.J.C., Clement W.L., Datwyler S.L., & Weiblen G.D. (2005) Biogeography and divergence times in the mulberry family (Moraceae). Molecular Phylogenetics and Evolution, 37, 402–16. 46 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Appendix S1 47 Polygonaceae Koenigia islandica L. 48 North America and southern South America (Argentina, Chile); northern Europe; Central Widespread in the temperate regions of both hemispheres (Hnatiuk, 1972; Marticorena et al., 2001; Roux, 2001), Africa (Kenia, South Africa, Tanzania, Uganda and Marion and Prince Edward Islands), Australia, South America and Europe. Western and Southern Europe, Macaronesia (Sánchez-Velázquez, 2003), Africa (Gabon, Kenya, Malawi, Tanzania, Mozambique, South Africa, Swaziland, Zimbabwe, Madagascar and Mauritius; Roux, 2001), New Zealand, Central and South America, Jamaica and in a single locality in North America (South Carolina; Farrar, 1993). Hymenophyllaceae Hymenophyllum tunbrigense (L.) Sm. Hymenophyllum peltatum (Poir.) Desv. Northern Hemisphere (North America and Eurasia), Macaronesia, Australia, Tasmania and New Zealand (Villar, 1968). Huperzia selago (L.) Bernh. ex Schrank & Mart. Lycopodiaceae Distribution Species Family There are no molecular works comparing populations from both hemispheres. Larsen et al. (2013) showed genetic differences only between Southern hemisphere populations. Therefore, a worldwide study is needed. Although there is uncertainty about the circumscription of its populations in Asia, Mexico, Central and South America (Richards & Evans, 1972; Farrar, 1993), Hennequin et al. (2010) showed that Chilean and Tanzanian populations differed genetically from the European ones (Asian or Central American populations were not included). There are no molecular works comparing populations from both hemispheres. A worldwide taxonomic study is needed due to its contrasting treatment in different floras (Aiken et al., 2007) Status Appendix S1. Bipolar species list from Moore & Chater (1971). Monocot species distributions have been obtained from Goaverts et al. (2014; http://apps.kew.org/wcsp/ 2015-05-20.); otherwise, noted. ________________________________________________________________ Chapter 1. ________________________________________________________________ Introduction Caryophyllaceae Temperate regions of North and South America (Moore 1983; Pedersen 1984; Wagstaff and Taylor 1988; Hoffmann et al. 1997). In southern South America, it has been described as exotic and introduced (Brion et al. 1988; Volponi 1990, 1999). Europe, North of Africa, Southwest Asia, Macaronesia, South Africa and South America (Styles, 1962; Zuloaga et al., 2008). There are no molecular works comparing populations from both hemispheres. It is a morphological complex taxon [treated as several subspecies in Europe (Tutin et al. 1993); several forms associated with differences in geographic distribution in North America (Hitchcock et al. 1977); and it has also been considered as extremely polymorphic in southern South America (Moore 1983; Pedersen 1984; Volponi 1990, 1999)]. Although Quiroga et al. (2002) showed morphological and genetic differences in the southern Andes populations and suggested ecotypic variation due to climatic changes during the Pleistocene, there are no molecular works supporting this assumption between hemispheres. Therefore, a worldwide study is needed. There are no molecular works comparing populations from both hemispheres. 49 Honckenya peploides Coastal North America and Eurasia. Its There are no molecular works comparing (L.) Ehrh. distribution in the Southern Hemisphere might populations from both hemispheres. be the result of anthropochorus origin (SánchezVilas, 2007). Cerastium arvense L. Polygonum maritimum L. and East Asia (Packer & Freeman, 2005). ________________________________________________________________ Chapter 1. ________________________________________________________________ Introduction Ranunculaceae North and southern South America. Anemone multifida Poir. 50 Native in the Holarctic; introduced in the Southern Hemisphere (Cook, 1963; Whittemore, 1997; Ruiz, 2001; Eichler & Jeanes, 2007; Lumbreras et al., 2011). Originally from Europe, it has been introduced in North America (including Mexico), Central America (Costa Rica, Guatemala) and South America (Bolivia and southern Argentina) as well as in western Asia (Siberia) and Antarctica (sub-Antarctic Islands; Crow, 2005). It has invaded 14 out of 22 southern Oceanic Islands (Shaw et al., 2011) and its eradication in some of them is been considered (Cooper et al., 2011). Ranunculus aquatilis L. Sagina procumbens L. There are great morphological differences across its distribution (Hoot et al., 1994). The genetic differences found between northern and southern hemispheres (Enhendorfer et al., 2009) might be the result of an ancestral hybridization and subsequent polyploidization (Meyer et al., 2010). It has been hypothesized a migration from North America to South America during the Quaternary (Mlinarec et al., 2012). In the northern hemisphere, allopolyploids were detected (Hoot et al., 2012; Mlinarec et al., 2012) as well as a high genetic variability between alpine vs. lowland ecotypes (McEwen There are no molecular works comparing populations from both hemispheres. There are no molecular works comparing populations from both hemispheres. ________________________________________________________________ Chapter 1. ________________________________________________________________ Introduction Gentiana prostrata Gentianaceae 51 North America, South America and Eurasia Predominantly Holarctic and southern South America (Patagonia) North America, southern South America and Australia (Elven et al., 2012). Hippuris vulgaris L. Armeria maritima (Mill.) Willd. North Africa, temperate Asia, North America and southern South America (Moore, Williams and Yates, 1972) Plantago maritima L. Plumbaginaceae Plantaginaceae There are no molecular works comparing Although it has been widely studied genetically, ctyogenetically and molecularly (e.g. Weidema et al., 1996; Coulaud et al., 1999; Fuertes Aguilar & Nieto Feliner, 2003; Piñeiro et al., 2011; Abratowska et al., 2012), there are no molecular works comparing populations from both hemispheres. Although Chen et al. (2013) showed genetic variation between populations in QinghaiTibetan Plateau (China; Chen et al., 2013), there are no molecular works comparing populations from both hemispheres. There are no molecular works comparing populations from both hemispheres. et al, 2013). ________________________________________________________________ Chapter 1. ________________________________________________________________ Introduction Temperate areas of Eurasia, North and South America Australia, New Zealand, Eurasia, North and South America Eurasia and North America; introduced in South There are no molecular works comparing America (Giussani et al., 2012) populations from both hemispheres. Eurasia, North and South America Catabrosa aquatica (L.) P. Beauv. Trisetum spicatum (L.) Richt. Poa glauca Vahl. Vahlodea atropurpurea (Wahlenb.) Fr. ex Hartm. [=Deschampsia atropurpurea (Wahlenb.) Scheele] 52 There are no molecular works comparing populations from both hemispheres. There are no molecular works comparing populations from both hemispheres. There are no molecular works comparing populations from both hemispheres. Molecular studies based on nuclear (ITS) and chloroplast regions (rbcL and matk) revealed no differentiation between northern and southern hemisphere populations and its distribution is suggested to be the result of a recent dispersal (von Mering, 2013). Poaceae Temperate areas of Eurasia, North America, South America and New Zealand. Triglochin palustre L. There are no molecular works comparing populations from both hemispheres. Juncaginaceae Australia, North and South America; possibly introduced in Europe (Wales; Jones, 2011) Limosella australis R. Br. populations from both hemispheres. Scrophulariaceae Haenke ________________________________________________________________ Chapter 1. ________________________________________________________________ Introduction Boudko (2014) showed no genetic differences between northern and southern hemisphere populations. 53 Subarctic and temperate regions of the Northern Hemisphere (Eurasia and North America), South America (Guatemala, Argentina and Chile) and South Georgia Phleum alpinum L. Chiapella (2007) shows some degree of molecular differentiation between northern and southern hemispheres populations. There are no molecular works comparing populations from both hemispheres. Eurasia, Africa (but introduced in Cape Provinces) North America (introduced in Hawaii, Aleutian Islands, Alaska, Yukon, British Columbia, Idaho, Oregon, Washington, Wyoming, Rhode Island, California, central Mexico), Central America (introduced in Costa Rica) and South America [introduced in central and South Brazil, Trista da Acunha (UK) and South Georgia (UK)]. Also introduced in North and South New Zealand. Avenella flexuosa (L.) Drejer [=Deschampsia flexuosa (L.) Trin.] Chiapella (2007) shows some degree of molecular differentiation between northern and southern hemispheres populations. Calamagrostis Temperate and subarctic Northern Hemisphere stricta (Timm.) Koel. (North America and Eurasia) and South America Bolivia, Peru and Patagonia) Subarctic, temperate and tropical mountains of Eurasia, Africa, (but introduced in Cape Provinces and Lesotho); Australia (introduced in South Australia), North America (introduced in Hawaii) and South America [introduced in Bolivia, South Brazil, West and South Argentina, central and south Chile, Macquaire Islands and South Georgia (UK)] Deschampsia cespitosa (L.) P. Beauv. ________________________________________________________________ Chapter 1. ________________________________________________________________ Introduction Cyperaceae North America, Europe, Australasia and southern South America (Patagonia) Eurasia, North America (including Hawaii) and South America (Bolivia, Peru, Argentina and Chile) Eurasia, North and South America (Patagonia) North America, Eurasia and South America Eurasia, North and South America (Colombia, Ecuador, Peru, Argentina and Chile) C. canescens L. C. macloviana D’Urv. C. magellanica Lam. C. martima Gunn. C. microglochin Wahlenb. 54 North America, Europe and southern South America (Patagonia) Carex arctogena L. Escudero et al. (2010) showed no molecular differences between Northern and Southern Hemisphere populations. Escudero et al. (2010) compared Northern and Southern Hemisphere populations and suggested a long-distance dispersal as the most plausible hypothesis explaining its distribution. Escudero et al. (2010) showed molecular differences between Northern and Southern hemisphere populations and suggested that it has obtained its distribution by long-distance dispersal. Escudero et al. (2010) showed no molecular differences between Northern and Southern Hemisphere populations and concluded that a long-distance dispersal as the hypothesis that best explains its distribution. Vollan et al. (2006) and Escudero et al. (2010) compared Northern and Southern Hemisphere and concluded that a long-distance dispersal as the best hypothesis to explain its bipolar distribution. There are no molecular works comparing populations from both hemispheres. ________________________________________________________________ Chapter 1. ________________________________________________________________ Introduction ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction References Abratowska, A., Wasowicz, P., Bednarek, P. T., Telka, J. & Wierzbicka, M. (2012). Morphological and genetic distinctiveness of metallicolous and non-metallicolous populations of Armeria maritima s.l. (Plumbaginaceae) in Poland. Plant Biology, 14, 586–595. Aiken, S.G., Dallwitz, M.J., Consaul, L.L., McJannet, C.L., Boles, R.L., Argus, G.W., Gillett, J.M., Scott, P.J., Elven, R., LeBlanc, M.C., Gillespie, L.J., Brysting, A.K., Solstad, H., & Harris, J.G. (2007). Flora of the Canadian Arctic Archipelago: Descriptions, Illustrations, Identification, and Information Retrieval. NRC Research Press, National Research Council of Canada, Ottawa. http://nature.ca/aaflora/data, accessed on 01-042015. Boudko, E. Phylogenetic analysis of subtribe Alopecurinae sensu lato (Poaceae). (2014) MSc Thesis, University of Ottawa, Ottawa, ON. Brion, C., Grigera, D., Puntieri, J., & Rapoport, E. (1988) Plantas exóticas en bosques de Nothofagus, comparaciones preliminares entre el norte de la Patagonia y Tierra del Fuego. Monografía de la Academia Nacional de Ciencias Exactas, 4: 37–47. Chen, J.M., Du, Z.Y., Sun, S.S., Gituru, R.W., & Wang, Q.F. (2013). Chloroplast DNA phylogeography reveals repeated range expansion in a widespread aquatic herb Hippuris vulgaris in the Qinghai-Tibetan Plateau and adjacent areas. Plos One, 8, 1– 10. Chiapella, J. (2007) A molecular phylogenetic study of Deschampsia (Poaceae: Aveneae) inferred from nuclear ITS and plastid trnL sequence data: Support for the recognition of Avenella and Vahlodea. Taxon, 56, 55–64. Cooper, J., Cuthbert, R.J., Gremmen, N.J.M., Ryan, P.G. & Shaw, J.D. (2011) Earth, fire and water: applying novel techniques to eradicate the invasive plant , procumbent pearlwort Sagina procumbens, on Gough Island, a World Heritage Site in the South Atlantic. In: Veitch, C. R.; Clout, M. N. and Towns, D. R. (eds.). Island invasives: eradication and management. IUCN, Gland, Switzerland. pp. 162–165. Cook, C.D.K. (1963) Studies in Ranunculus subgenus Batrachium (DC.) A. Gray. II. General morphological considerations in the taxonomy of the subgenus. Watsonia, 5, 294– 303. Coulaud, J., Barghi, N., Lefèbvre, C., & Siljak-Yakovlev, S. (1999) Cytogenetic variation in populations of Armeria maritima (Mill.) Willd. in relation to geographical distribution and soil stress tolerances. Canadian Journal of Botany, 77, 673–685. Crow, G. E. (2005) Sagina. In: Flora of North America North of Mexico, vol. 5, Flora of North America Editorial Committee. Oxford University Press. New York, NY. pp. 140–147 Eichler, H.J., & Jeanes, J.A. (2007) Ranunculaceae. Flora of Australia, vol. 2. ABRS/CSIRO, Melbourne, Australia. Ehrendorfer, F., Ziman, S.N., König, C., Keener, C.S., Dutton, B.E., Tsarenko, O.N., 55 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Bulakh, E.V., Caiu, M.B., Médail, F., & Kästner, A. (2009) Taxonomic revision, phylogenetics and transcontinental distribution of Anemone section Anemone (Ranunculaceae). Botanical Journal of the Linnean Society, 160, 312–354. Elven, R., Murray, D.F., & Solstad, H. (2012) Hippuris (Plantaginaceae) In: Flora of North America, Provisional Publication, Flora of North America Editorial Committee. Oxford University Press. New York, NY. : http://floranorthamerica.org/files/Hippuris03h.CH%20for%20Prov%20Pub.pdf. [online: accessed on 10 May 2015]. Escudero, M., Valcárcel, V., Vargas, P., & Luceño, M. 2010. Bipolar disjunctions in Carex: Long-distance dispersal, vicariance, or parallel evolution? Flora 205, 118–127. Farrar, D.R. (1993) Hymenophyllaceae in: Flora of North America, vol.2. Pteridophytes and Gymnosperms. Flora of North America Editorial Committee. Oxford University Press, New York, NY. pp. 190–197 Fuertes Aguilar, J. & Nieto Feliner, G. (2003) Additive polymorphisms and reticulation in an ITS phylogeny of thrifts (Armeria, Plumbaginaceae). Molecular Phylogenetics and Evolution, 28, 430–447. Giussani, L.M., Anton, A.M., Negritto, M.A., Romanutti, A.A., & Soreng, R.J. (2012) Poa L. In: Zuloaga, F.O., Rúgolo de Agrasar, Z.E. & Anton, A.M., Monocotyledoneae. Poaceae: Aristiodoideae a Pharoideae. Flora Argentina: Flora Vascular de la República Argentina, Graficamenta Ediciones, Córdoba. pp. 284–339. Hennequin, S., Ebihara, A., Dubuisson, J.Y., & Schneider, H. (2010) Chromosome number evolution in Hymenophyllum (Hymenophyllaceae), with special reference to the subgenus Hymenophyllum. Molecular Phylogenetics and Evolution, 55, 45–59. Hnatiuk, R.J. (1972) Hymenophyllum peltatum (Poiret) Desvaux, a New Macquarie Island Record. New Zealand Journal of Botany, 10, 701–704. Hoffmann, A., Arroyo, M.T., Liberona, F., Muñoz, M., & Watson, J. (1997) Plantas Altoandinas en la Flora Silvestre de Chile. Fundación Claudio Gay, Santiago de Chile. Hoot, S.B., Meyer, K.M., Manning, J.C. (2012) Phylogeny and reclassification of Anemone (Ranunculaceae), with an rmphasis on austral species. Systematic Botany, 37, 139– 152. Hoot, S.B., Palmer, J.D. & Reznicek, A.A. (1994) Phylogenetic relationships in Anemone based on morphology and chloroplast DNA variation. Systematic Botany, 19, 169– 200. Jones, R.A. (2011) Conservation genetics and the need for historic and field data: three case studies from research into scarce and declining lowland plants. In: T.H. Blackstock, E.A Howe, J.P. Rothwell, C.A. Duigan and P.S. Jones. Proceedings of a memorial conference for Dr David Paul Stevens, 1958 - 2007. Grassland ecologist and conservationist. CCW Staff Science Report No: 10 / 03 / 05, Countryside Council for Wales, Bangor. 56 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction Larsen, C., Ponce, M., & Scataglini, M.A. (2013) Revisión de las especies de Hymenophyllum (Hymenophyllaceae) del sur de Argentina y Chile. Gayana Botánica, 70, 274–329. Lumbreras, A., Navarro, G., Pardo, C., & Molina, J.A. (2011) Aquatic Ranunculus communities in the northern hemisphere: A global review. Plant Biosystems - An International Journal Dealing with all Aspects of Plant Biology, 145, 118–122. Marticorena, C., Squeo, F.A., Arancio, G. & Muñoz-Schick, M. (2001) Catálogo de la flora vascular de la IV Región de Coquimbo. Libro Rojo de la Flora Nativa y de los Sitios Prioritarios para su Conservación: Región de Coquimbo (ed. by F.A. Squeo, G. Arancio and J.R. Gutiérrez), Ediciones Universidad de La Serena, Chile. pp. 105–142. McEwen, J.R., Vamosi, J.C., & Rogers, S.M. (2013) Natural selection and neutral evolution jointly drive population divergence between alpine and lowland ecotypes of the allopolyploid plant Anemone multifida (Ranunculaceae). Plos One, 8, e68889. von Mering, S.V. (2013) Systematics, phylogeny and biogeography of Juncaginaceae. PhD Thesis, University of Johannes GutenbergǦUniversität, Mainz, Germany. Meyer, K.M., Hoot, S.B., & Arroyo, M.T.K. (2010) Phylogenetic affinities of South American Anemone (Ranunculaceae), including the endemic segregate genera, Barneoudia and Oreithales. International Journal of Plant Science, 171, 323–331. Mlinarec, J., Šatović, Z., Malenica, N., Ivančić-Baće, I., & Besendorfer, V. (2012) Evolution of the tetraploid Anemone multifida (2n = 32) and hexaploid A. baldensis (2n = 48) (Ranunculaceae) was accompanied by rDNA loci loss and intergenomic translocation: evidence for their common genome origin. Annals of Botany, 110, 703–712. Moore, D. (1983) The Flora of the Fuego-Patagonian Cordilleras : its Origins and Affinities. Revista Chilena de Historia Natural, 56, 123–136. Moore, D.M., Williams, C.A., & Yates, B. (1972) Studies on bipolar disjunct species II. Botaniska Notiser, 125, 261–272. Packer, J.G., & Freeman, C.C. (2005) Koenigia L. Magnoliophyta: Caryophyllidae, Part 2. In Flora of North America North of Mexico, vol. 5. Flora of North America Editorial Committee. Oxford University Press, New York, NY. pp. 600–601. Pedersen, T.M. (1984) Caryophyllaceae. In: Flora Patagónica. Vol., 4. Correa, M.N. (ed). Colección Científica del INTA, Buenos Aires. Piñeiro, R., Widmer, A., Fuertes Aguilar, J., & Nieto Feliner, G. (2011) Introgression in peripheral populations and colonization shape the genetic structure of the coastal shrub Armeria pungens. Heredity, 106, 228–240. Richards, P.W., & Evans, G.B. (1972) Hymenophyllum tunbrigense (L.) Sm. The Journal of Ecology, 60, 245–268. Roux, J.P. (2001) Conspectus of Southern African pteridophyta. Southern African Botanical Diversity Network Report, No. 13, SABONET, Pretoria. pp. 221-222. Ruiz, E. (2001) Ranunculaceae. In: Flora de Chile, Vol. 2. Marticorena, C., & Rodríguez, R. (eds.). Concepción, pp. 89–94. 57 ________________________________________________________________ ________________________________________________________________ Chapter 1. Introduction 58 Chapter 2 Taxonomy of the Carex capitata complex 59 60 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Taxonomy of the Carex capitata complex Tamara Villaverde1, Santiago Martín-Bravo1 and Julian R. Starr2,3 1 Botany area, Department of Molecular Biology and Biochemical Engineering, Pablo de Olavide University, ctra. de Utrera km 1, 41013, Seville, Spain, 2Canadian Museum of Nature, PO Box 3443, Ottawa, ON K1P 6P4, Canada, 3Department of Biology, Gendron Hall, University of Ottawa, 30 Marie Curie, Ottawa, ON K1N 6N5, Canada. *Correspondence: Tamara Villaverde, Botany area, Department of Molecular Biology and Biochemical Engineering, Pablo de Olavide University, ctra. de Utrera km 1, 41013, Seville, Spain. E-mail: tvilhid@gmail.com 61 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Abstract Carex section Capituligerae is a small group placed in the Unispicate clade within the Caricoid clade that comprises three to four taxa: Carex capitata L., an arctic-alpine species with a circumpolar distribution; C. oreophila C. A. Mey, an alpine species found in the mountains of western Asia and C. arctogena Harry Sm., an alpine species from North America, South America and Eurasia. The taxonomy of the section has traditionally been controversial, especially concerning the circumscription of the C. capitata - C. arctogena species group. We performed uni- and multivariate analysis of macro- and micromorphological characters (28 variables) from 450 specimens of the C. capitata - C. arctogena species group, covering their morphological and geographical variability, in order to elucidate its taxonomy. Carex capitata and C. arcotgena are found to be morphologically different and populations from South America correspond to C. arctogena. Morphological variability, which also corresponds with geographical distribution, was found within populations from western North America and we suggest the description of one species and two subspecies: Carex cayouetteana, C. cayouetteana subsp. bajasierra and C. cayouetteana subsp. altasierra. Keywords: arctic-alpine species, Carex arctogena, Carex capitata, Carex section Capituligerae, species complex, morphology, PCA, taxonomy 62 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Introduction Recent molecular studies based on nuclear and plastid DNA sequences (ETS-1f, ITS, trnL intron, trnL-trnF intergenic spacer) showed that there are four main clades within the genus Carex (Waterway et al., 2009): (i) Vignea clade, which encloses all species in the subgenus Vignea; (ii) Core Carex clade, which comprises subgenera Carex and Vigneastra; (iii) Caricoid clade, which groups subgenus Psyllophora plus genera Cymophyllus, Kobresia, Schoenoxiphium, and Uncinia; (iv) Siderostictae clade, formed only by species in section Siderostictae. Later on, Starr et al., (2015) found another clade, the Hypolytroides clade, sister to the Siderosticatae one, and both sister to all other species in tribe Cariceae. All these results confirmed that Carex was a paraphyletic group with all other genera of tribe Cariceae nested within it. For these reasons, it has been recently agreed by the Global Carex Group (2015) to consider a new broader circumscription of Carex, changing its classification by unifying all genera within it. Therfore, the genera Cymophyllus, Kobresia, Schoenoxiphium, and Uncinia were transferred into Carex. However, clade names are still used for Carex systematics. Section Capituligerae is a small group placed in the Unispicate clade within the Caricoid clade (Figure 4 in Chapter 1) that comprises three to four taxa: Carex capitata L., an arctic-alpine species with a circumpolar distribution; C. oreophila C. A. Mey, an alpine species found in the mountains of western Asia (Egorova, 1999) and C. arctogena Harry Sm., an alpine species from North America, South America and Eurasia, which has been treated as synonym to C. antarctogena Roiv. by Egorova (1999) and Moore & Chater (1971). Despite its small size, the section possesses several taxonomic problems concerning the circumscription of its species that should be firstly resolved in order to not misinterpret posterior results from other studies such as the following biogeographic ones. Although Carex capitata and C. arctogena are 63 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex recognized as separate species in some taxonomical treatments and online databases (e.g. Egorova 1999; Jiménez-Mejías & Luceño, 2011; Govaerts et al., 2014), they are considered as synonyms by other authors (e.g. Murray, 2002; http://www.tropicos.org). Hybrids involving different members of the C. capitata complex have never been reported. The recognition of both taxa as different species is based on the following characters:, C. capitata is pointed out to have generally longer inflorescences, bigger achenes, shorter pistillate scales and smooth margins; it forms looser tussocks than C. arctogena and occurs at lower elevations, in moist or humid areas (Table 1). Carex arctogena’s distribution in Europe is less widespread (Fig. 2), occurring only in Scandinavian countries. In North America, it occurs from Greenland to Mexico, where it presents a considerable morphological and ecological variability, particularly in western North America. Some authors (Smith, 1940; Egorova, 1999; Cayouette, 2007) stated the necessity of more detailed studies including specimens from North America. Moreover, C. arctogena circumscription is also unclear regarding populations found in South America, which were thought to represent a separate species, C. antarctogena Roivanen. As stressed by Reinhammar & Bele (2001), only a comprehensive worldwide study of the complex using morphological, genetic and habitat variation would resolve the systematics of these taxa. Therefore, the aims of this study are: (i) to investigate how many taxonomical entities are found in the C. capitata complex and their appropriate rank; and (ii) to characterize them morphologically, ecologically and geographically. Materials and methods Sampled material 64 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Owing to the scarcity of herbarium specimens for Carex capitata s.l. from South America and the western USA, two expeditions were made to collect fresh material: one to Patagonia (January-February 2010) and a second to the western of United States (July-August 2010). Samples were collected for a total of 10 populations, covering the distributional range of the species in those regions (Govaerts et al., 2014). The isotype for C. arctogena Harry Sm. was obtained from Agriculture and Agri-Food Canada (DAO, Ottawa) whereas high resolution scans of the holotypes and leptotypes for C. capitata and C. antarctogena were obtained from the Linnean Society of London (LINN) and from the University of Helsinki (H), respectively. Four hundred and forty six herbarium specimens were obtained on loan from the following herbaria (abbreviations according to Index Herbariorum; Thiers, 2012): A, ALA, BAA, BRY, C, CAN, CAS, CCO, CHSC, COLO, DAO, GH, H, ICEL, M, MICH, MONTU, O, OSC, RM, RMS, UBC, UNM, UTEP, WIN and WTU. Carex oreophila has not been studied as its morphological circunscripcion within the section is not problematic. Morphological study Vegetative characters were measured using a standard rule for parts longer than 10 cm whereas all other quantitative characters were measured to the nearest 0.1 of a millimeter using a stereoscopic binocular Nikon microscope Olympus SZX12 and a micrometer. Qualitative states were scored by eye. Twenty nine morphological characters [28 quantitative (22 cuantitative and 6 discrete) and one qualitative; see Table 2], were measured on a total of 147 specimens (C. capitata, N=43; C. arctogena, N=34, C. antarctogena, N=6; undetermined specimens N= 63). Summary statistics for all 65 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex characters including means, standard deviations and ranges were calculated for each group in R v2.15.0 (R Development Core Team, 2011). The lowermost, mature achene was removed from the terminal spikes of representative samples of each group (C. capitata, C. arctogena, C. antarctogena and unclassified specimens). The perigynium surrounding the achene was dissected away and the cell wall of the epidermal layer of achenes was removed using a 9:1 sulfuric acid - acetic anhydride solution in order to expose the silica bodies (Starr & Ford, 2001). Scanning Electron Microscopy (SEM) was then employed to search for taxonomically diagnostic micromorphological characters on the silica deposit surfaces. Samples were mounted onto aluminum stubs with conductive carbon adhesive discs, sputter coated with a 20-25 nm layer of a gold/palladium alloy and photographed in high vacuum mode using a Philips XL-30 ESEM with a 10kV accelerating voltage. Silica body morphology was described according to the terminology of Schulyer (1971). Statistical Analysis Statistical analyses of morphological data were aimed at identifying significantly distinct groups and diagnostic characters and to test if the studied individuals formed different groups correlated with the different taxa traditionally recognized within the C. capitata complex. Histograms showing interspecific frequency differences between groups were made for the six discrete variables. Quantitative variables for the five putative taxa were explored using boxplots. The Shapiro Wilk normality test conducted in the data set showed that most of the variables were not normally distributed within the putative taxa, thus intertaxon variation was analyzed using a Kruskal-Wallis one-way ANOVA. A post-hoc Mann-Whitney U pairwise test was also performed to assess whether differences were 66 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex significant between groups. These analyses were run in R v2.15.0 (R Development Core Team, 2011). Principal component analysis (PCA) is primarily used for structure detection within the studied data, and thus, PCAs were performed to detect groups among all specimens. These analyses were carried out using R v2.15.0 (R Development Core Team, 2011). A first PCA was conducted using specimens of C. capitata, C. arctogena and C. antarctogena and all 22 continuous variables. The analysis was repeated in the same dataset using a subset of 12 quantitative variables (denoted by asterisks in Table 2) that included the characters employed by Egorova (1999) to differentiate between C. capitata and C. arctogena and those determined in a pilot analysis to set apart three groups within the unclassified specimens. A correlation matrix was studied in order to discard highly correlated variables (>0.8) within the subset (see Tables S2 and S3 in Appendix). Although the length of the inflorescence and length of the staminate portion were highly correlated (0.9), both were retained in the PCA because this correlation was observed to be inconsistent in C. capitata. Consecutive PCA were performed removing groups that were distinctly retrieved (Jiménez-Mejías & Cabezas, 2009; Valcárcel & Vargas, 2010; Jiménez-Mejías et al., 2014). Geography All studied specimens were geo-referenced to determine the geographic ranges for each putative taxon and to reveal whether taxa occur in sympatry or allopatry. Distribution maps [from Olson et al. (2001) for world maps, and North American Commission for Environmental Cooperation for North American maps] of all the putative taxa in the complex were made in ESRI ArcGIS v. 9.2, using all the specimens studied. Ecology 67 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex For the three populations collected in North America, soil pH measurements using Cornell pH Test Kit Wide Range (Ithaca, New York) were taken to characterize habitat conditions. A list of vascular plants associated with the complex (observed within 10 m of a plant of C. capitata complex) was noted. Habitat characterization of all the putative taxa in the C. capitata complex was made from field work observations and voucher label information, unless otherwise noted. Micromorphological study Silica bodies are phytoliths produced by some plant species when soluble silica from the ground water is absorbed by the roots and carried to different parts of the plant through the vascular system. In sedges, they are found in the achene and leaf epidermal layers (Toivonen & Timonen, 1976). Micromorphology in angiosperms has been used to discriminate macromorphologically similar taxa (Stuessy, 2009). Silica bodies were studied because they can sometimes show significant interspecific variation among closely related species in Carex (Starr & Ford, 2001; Zhang, 2006). However, some other micromorphology studies on Carex silica bodies did not help to differentiate between closely related species (Standley, 1987; Rothrock, 1997). Results Raw data from all specimen measurements is available in Appendix S1. All the label information from the herbarium specimens studied is gathered in a Botanical Research and Herbarium Management System database (http://dps.plants.ox.ac.uk/bol/BRAHMS/Home/Index) that is available upon request from the author (see Figure 2). Univariate analysis 68 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Specimens from South America, previously identified as C. antarctogena, were compared to specimens of C. arctogena from North America and Europe, resulted in no statistically significant differences between them (see Table 2). Therefore, those specimens were included in the C. arctogena group. Despite some overlap in the measurements for many characters, all taxa present significant differences between variables (Table 2). Based on Mann-Whitney pairwise comparisons between taxa in the complex, the best variables to distinguish them are: culm length (overwintered or not), the length of the staminate flowers portion, leaf length, inflorescence length and width, perigynium width, and length of the shortest hyaline margin. All taxa can be identified by a unique set of characters. Based on uni- and multivariate analyses, three new taxonomic entities are identified within the studied specimens and subsequently described. Specimens with medium-size culms, the longest pistillate scale and the widest perigynia were referable a new species herein described as C. cayouetteana sp. nov. (see section Species descriptions and Figure 15). Specimens with the longest culms, leaves, inflorescence and staminate flowers portion were referable to a new subspecies herein described as C. cayouetteana subsp. bajasierra subsp. nov. (see section Species descriptions and Figure 16). Specimens with short culms and leaves and the narrowest inflorescence were referable to C. cayouetteana subsp. altasierra subsp. nov. (see section Species descriptions and Figure 17). Specimens with short culms, small staminate flowers portion, long hyaline margins, narrow perigynia and with the smallest staminate scales were referable to C. arctogena, which its morphological characteristics are consistent with both its holotype and C. antarctogena holotype (Figures 2.14, A.12 and A.13). Finally, specimens with long culms and leaves, the widest inflorescence, the narrowest pistillate scales and the longest perigynia were referable to C. capitata (Figure 2.13). Although discrete characters do not present 69 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex statistically significant differences between taxa (Figure A.1), in general C. arctogena possesses more teeth along the edges of the perigynium that what is seen in other species. For instance, C. capitata and C. cayouetteana subsp. bajasierra have smooth perigynia or possess only a few teeth, generally no more than three, on perigynium margins whereas C. arctogena often have between four and seven. In general, C. cayouetteana subsp. altasierra also possess smooth perigynia, but at least one specimen presented 16 teeth along its margins. Multivariate analyses During the analyses of morphological traits, one qualitative character, color of the culm sheath, was discarded as it could not be reliably scored. Boxplots for each of the twenty two continuous variables (Figures A.2 and A.3 in Appendix) show interspecic differences between taxa. Only two characters (achene and leaf width) were not significantly different among members of the complex (Table A.1 in Appendix). MannWhitney pairwise comparisons reveled the following critical diagnostic characters for differentiating between species within the complex (Table 2.8 in Appendix): length of the longest culm overwintered (CLHMT) or from the present year (CLMH), length of the staminate portion of the inflorescence (MSPL), leaf length (LEAFL), length of the spike (INFLOL), width of the perigynium (PERIGW), width of the spike (INFLOW) and length of the narrowest hyaline margin in the pistillate scale (GLUMHC). All taxa can be identified by a unique set of characters. Specimens with the longest culms, leaves, inflorescence and staminate flowers portion were referable to C. cayouetteana subsp. bajasierra (Figure 2.3). Specimens with short culms and leaves and the narrowest inflorescence were referable to C. cayouetteana subsp. altasierra (Figure 2.4). Specimens with medium-size culms, the longest pistillate scale and the widest perigynia were referable to ‘C. cayouetteana’ (Figure 2.5). Specimens with short culms, 70 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex small staminate flowers portion, long hyaline margins, and narrow perigynia and with the smallest staminate scales were referable to C. arctogena, being in consistence with both its holotype and C. antarctogena holotype (Figures 2.6, A.13 and A.14 in Appendix). Finally, specimens with long culms and leaves, the widest inflorescence, the narrowest pistillate scales and the longest perigynia were referable to C. capitata (Figure 2.7). A scatter plot of the two first components in a PCA using all C. capitata and C. arctogena specimens measured and 12 variables was made to study if they could be clearly differentiated. As shown in Figure 2.9, there is practically no overlap between C. capitata and C. arctogena, consisting in two distinctive clusters. PCA of the five groups (C. capitata, C. arctogena, C. cayouetteana subsp. cayouetteana, C. cayouetteana subsp. bajasierra and C. cayouetteana subsp. altasierra) graphically summarized the phenetic differences among individuals. Only scatter plots from the PCA with the 12 variables are shown. Similar results are obtained when using the 22 continuous variables measured (see Figures A.5, A.6, A.7, A.8, A.9 and A.10 in Appendix). When comparing all specimens of C. arctogena, C. cayouetteana subsp. cayouetteana, C. cayouetteana subsp. bajasierra and C. cayouetteana subsp. altasierra and using 12 variables, there is a clear separation of C. cayouetteana subsp. bajasierra from all the other taxa (Figure 2.10). Then, if C. cayouetteana subsp. bajasierra is removed from the analysis, there is a clear increase in the split of C. cayouetteana subsp. cayouetteana from C. arctogenaand C. cayouetteana subsp. altasierra (Figure 2.11). Finally, removing C. cayouetteana subsp. cayouetteana, the scatter plot from the PCA shows a small overlap between C. arctogena and C. cayouetteana subsp. altasierra, although two main clusters could be differentiated (Figure 2.12). The first two principal component axes in PCA using 12 continuous variables, accounted for 28; 53% and 16; 71 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex 7% of the total variance. . First components in a PCA using C. arctogena specimens from North America and Europe and C. antarctogena specimens and the 12 variables selected showed that there is not a geographical pattern within the samples (see Figure 2.8). Therefore, C. antarctogena specimens were labeled afterwards as C. arctogena. Micromorphological characters Silica bodies presented no significant differences between or within putative taxa in the complex, with all the members possessing a single, circular central body in the middle of a concave silica platform. Epidermal cell walls were commonly linear, isodiametric and six-sided (Figure 2.15). Geographical distribution Carex capitata presents a circumboreal distribution and it occurs in Eurasia and in North America (Figure 2.16). In Europe, it occurs in Iceland, Norway, Sweden, Finland, Germany, Austria, Switzerland and Italy. In Asia, it occurs in Russia from Kola Peninsula to Chukotka peninsula, occurring south to 50ºN in central eastern Russia. Raymond (1949) also noted that it occurs in northern Mongolia, but no specimen from this region was examined during this study. In North America, it occurs in Alaska, the Yukon Territory, the Northwest Territories, British Columbia (South to ca. 50ºN), Alberta, Saskatchewan (South to ca. 52ºN), northern Manitoba, northern Ontario and Greenland (North to ca. 72ºN). Carex arctogena has a bipolar and amphi-Atlantic distribution with stations in northern Europe (Scandinavia), North America and South America (Figure 2.1). In North 72 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex America, it occurs in British Columbia (South to ca. 50ºN), northern Saskatchewan, Manitoba (South to 52ºN), northern Ontario, northern Québec, Newfoundland and Labrador (South to ca. 52ºN), Nunavut (until South of Victoria Island and Baffin Island, 63.5ºN), New Hampshire (White Mountains and Mt. Washington, 44ºN; Steele & Hodgon (1973) reported to occur in Mt. Cardigan but that material was not examined) and its northernmost latitude occurs in Greenland (North to ca. 68ºN). In South America, it occurs in Argentinian and Chilean Patagonia, from Tierra del Fuego (Argentina) to Neuquén province (38ºS, Argentina). Carex cayouetteana subsp. cayouetteana, C. cayouetteana subsp. bajasierra and C. cayouetteana subsp. altasierra are endemic to North America (Figure A.16 in Appendix). Carex cayouetteana subsp. cayouetteana occurs only in western North America with stations in Colorado, Utah, Montana, Wyoming, Nevada, California, Washington, Alberta and British Columbia (North to ca. 49ºN). C. cayouetteana subsp. bajasierra occurs only in northern California and southern Oregon (Deschutes, Jackson and Lake Counties). C. cayouetteana subsp. altasierra is a Californian endemic, restricted to high elevations in the Sierra Nevada (Inyo, Mono, Tulare and Tuolumne Counties). Ecological requirements Carex capitata is an alpine species. In northern latitudes such as Alaska or the European Arctic, it is found in tundra and taiga (boreal forest) environments whereas in southern latitudes, such as central Europe or western Canada, it is found in alpine or subalpine areas. It occurs in rich and calcareous fens, mires, peat-bog margins, meadows, wet tundra and other humid or moist habitats, sometimes with moss as also noticed by Smith 73 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex (1940). In Alaska, it is also found in marshes and poplar forest from lowlands (400 m) to at least 800 meters. In northeastern North America, it is mainly found in areas adjacent to Hudson Bay, rare or local in alpine summits towards South. Carex capitata elevational occurrence in Italy is at 1900 - 1980 m (in the South Tyrols). It has been reported to be strictly a calciphile or calciphilous (Smith, 1940; Nilson, 1991; Cayouette, 2007), but such information was not taken from the label data from the specimens examined for this study. Carex arctogena is an arctic-alpine species. It generally occurs in wind-exposed alpine heaths, often dominated by Empetrum (Ericaceae) and also in cliffs, ridges, summits and in dry areas often dominated by rocky or gravelly soil. In northeastern North America it is found locally in New Hampshire (Alpine Garden and Mt. Cardigan) at 1900 m, one of the highest elevations within its entire distribution together with its southernmost localities in British Columbia (ca. 2000 m). Similarly, it occurs near this altitude in northern Patagonia (Neuquén). In southern South America, it occurs in humid areas such as bogs, wet meadows and eutrophic marshes at low elevations, often in areas of high floral diversity (Table 2.2). In the southernmost region of Patagonia, Tierra del Fuego, C. arctogenawas found in a semi-humid grassland, dominated by tufted grasses interspersed with Empetrum rubrum at low elevations (Table 2.2). It has been reported to grow in either calciphile, peridotite, gneiss, granite or serpentine soils (Smith 1940; Nilson 1991) but such information is generally missing in voucher specimens. Carex cayouetteana subsp. cayouetteana generally occurs in acidic and rocky soils (see Table 2.3), in wind-exposed, alpine moist tundra areas and sometimes in dry meadows. It is found from ca. 2000 m in Washington and California to at least 3500 m in Colorado and Utah, where it can grow on quartzite soils. 74 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex C. cayouetteana subsp. bajasierra may occur in acidic-neutral pH soils (see Table 2.4), in wet meadows or mires surrounded by woods. In northern California (Tehama, Plumas and Butte Counties) and southern Oregon (Lake and Jackson Counties), it occurs at unusually low elevations for the complex at this latitude (ca. 1400 m). In Sierra and El Dorado Counties, it occurs in wet marshy meadows and in open Pinus contorta forests at ca. 1980- 2300 m where it reaches its highest elevation. C. cayouetteana subsp. altasierra is restricted to the highest elevations in California. It occurs in non-glaciated plateaus and wet banks. On the North side of Mount Humphries (‘Humphries Plateau’, Inyo Co.) it grows at 3900 m and also at 3600 m at Mono Mesa (Inyo Co.); in northeastern Tulare Co., in wet banks at ca. 3400 m. It is found in Tuolumne Co., in soil formed from metamorphic rocks, in non-glaciated areas at ca. 3800 m Discussion There are geographical and ecological differences between the taxa found in this complex: C. capitata presents a circumboreal distribution whereas C. arctogena presents a bipolar distribution; Carex cayouettena subsp. cayouetteana is only found in western North America from (2000 to 3800 m); C. cayouetteana subsp. bajasierra is restricted to southern Oregon and northern California (1400 - 2300 m); and C. cayouetteana subsp. altasierra occurs locally at high elevations (3400 - 3900 m) in California. Only 8 herbarium specimens of C. cayouetteana subsp. altasierra were observed during the course of this study. Giving the extreme elevation at which this species occurs, this might indicate that C. cayouetteana subsp. altasierra is rare or that the habitat in which it occurs has been under collected. 75 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Although C. antarctogena specimens from South America displayed statistically significant morphological differences regarding to northern hemisphere specimens of C. arctogena in some variables, they are not enough to differentiate between northern and southern specimens. These differences are of a 10% in average and for one variable, length of the staminate portion is of 38% (but this variable has a standard deviation of the same order of magnitude as the mean). Thus, C. antarctogena and C. arctogena are treated as synonyms in this study, which is consistent with the previous morphological analysis by Moore & Chater (1971). In congruence, in Chapter 3, molecular analyses of three chloroplast regions (matK, atpF-atpH and rps16; 2297 characters), show no genetic differences between C. arctogena from the Northern vs. Southern Hemisphere. On the other hand, some variability was found within C. capitata specimens from Russia, Austria, Ontario and Alberta, which have culms longer than 41 cm long. This plasticity within C. capitata was also remarked by Raymond (1949) in some specimens collected in Québec (Lac De l’Ours). However, in our opinion, this appears to be no more than a regional trend and it is not correlated with other morphological characters, so it might not deserve taxonomical recognition. All taxa in the C. capitata complex are long-lived perennials, wind-pollinated and reproduce sexually. Hybrids between members of the complex have not been reported. A large number of new species has been described over the last few decades in North America North of Mexico (Ertter, 2000). This is especially true for the genus Carex (Naczi, 1993; Naczi et al., 1998; Saarela & Ford, 2001), with an average of two taxa described per year over the last 20 years (Ertter 2000). This rich biodiversity in North America could be due to ecological diversity and historical environmental transformations due to paleoclimatic changes, especially during Pleistocene climatic oscillations, as it has been highlighted in many intensive Flora studies (e.g. Ball et al., 76 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex 2002) and should continue to be the focus of research interests in order to better understand species distributions. All five species of the C. capitata complex occur in North America and the three new taxa are endemic to North America, which provides further evidence of the taxonomic richness that exists within North American Carex. Some other examples include C. maritima Gunn. species complex, a bipolar species widely distributed in North America, whose ecological and morphological variability led Kreczetowitcz (1932) to described twelve different species and some other botanists to describe new taxa [e.g. C. incurviformis Mack. varieties, C. maritima var.setina (Christ) Fernald or C. maritima var. misera (Kük.) Fernald]; and forms [e.g. C. maritima f. inflata (Simmons) Polunin]. It is also remarkable the studies made by Naczi et al. (2002) who described seven new Carex species from North America (C. acidicola Naczi, C. calcifugens Naczi, C. paeninsulae Naczi, E. L. Bridges & Orzell, C. thornei Naczi, C. kraliana Naczi & Bryson, C. gholsonii Naczi & Cochrane and C. infirminervia Naczi). 77 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Taxonomic treatment The following key helps to identify the species of C. capitata complex recognized in this study. Mature, complete and well developed specimens are necessary for correct identifications. Key to species of the C. capitata complex 1. Tallest culm < 160 mm long, inflorescence < 3 mm wide…. C. cayouetteana subsp. altasierra .(Y3) 1. Tallest culm > 160 mm long, inflorescence > 3 mm wide……………………….2 2. Inflorescence > 13 mm long…………………………………C. cayouetteana subsp. bajasierra. (Y2) 2. Inflorescence < 13 mm long……………………………………………….…3 3. Perigynia < 17 mm wide with more than 3 teeth, hyaline margins on the pistillate scales in a triangular shape…...………………. C. arctogena 3. Perigynia > 17 mm wide with less than 3 teeth, hyaline margins on the pistillate scales in an inverted V shape…………………………………..4 4. Tallest culm < 230 mm long, staminate portion > 2.4 mm long, pistillate scales > 2.2 mm long and > 1.5 mm wide .....C. cayouetteana subsp. cayouetteana. (Y) 4. Tallest culm > 230 mm long, staminate portion < 2.4 mm long, pistillate scales < 2.2 mm long and < 1.5 mm wide .....C.capitata 78 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Species descriptions Carex capitata L., Syst. Nat. (1759) 10th ed., 2:1261. Type: Sweden, Lapponia. Leg. Solander. Stockholm Linnean Herbarium 378.13 (S-LINN: IDC 378.13) photo! Herb forming loose to dense tussocks. Roots dark yellow, light brown, yellow or greyish-yellow. Culms 12-49 cm high and 0.6-1.0 mm wide at the middle, slender, wiry, more or less dentate on the margins and mainly near the apex. Leaves usually 3-5 per culm, old leaves persistent, most often shorter than the culm; leaf sheaths dark orangebrown, dark brown-red or dark brown at the base, sparingly filamentose.; blades 11.5-36 cm long and 0.4-1.5 mm wide in the middle, filiform, stiff, erect or recurving, truncate mouth; ligule very short, obtuse. Spike solitary, androgynous, globose, ovoid or trigonal, with staminate portions covering 15 % to 34 %, fairly densely packed, of 5.510.3 mm long and 3.3-5.4 mm wide, staminate portions from 0.8-3.5 x 0.5-1.3 mm, 515 staminate flowers, 12-27 pistillate flowers; bract absent or rarely present; staminate scales erect, obovate or ovate, the body orange, dark yellow-orange or brown-yellow with hyaline margins located in the distal 1/3 and 0.1-0.2 mm wide, often folded, glabrous, 1.6-2.9 x 0.6-1.5 mm, incomplete veins, acute apex; stamen with anthers 1.01.5 mm long; pistillate scales ovate or broadly ovate, the body orange, dark orange or brown, hyaline margins absent or 0.1-0.5 mm in the central portion and 0.1-2.25 mm along the edges, central nerve rarely present, glabrous, 1.5-2.5 x 0.8-1.8 mm, shorter than the perigynium body and reaching 1/2 of perigynia body length, narrower than the perigynia and sometimes not reaching 3/4 of perigynia width; distal perigynia erect or ascending, mostly spreading or the lowermost descending or retracted in the proximal part, the body greenish-light yellow in proximal half, yellow to yellow-grayish or brown with some redness in the distal half, surface often shiny with some red dots, 1.8-3.6 x 1.3-2.2 mm, margins sometimes winged especially in the 1/3 proximal and 0.1-0.2 mm 79 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex wide, smooth (rarely 0-5 teeth), round bases, apex acute, contracting gradually into a beak; beaks brown or orange-brown, apex orange or hyaline, 0.8-1.7 mm long x 0.2-0.3 mm wide at the base, straight; gynoecium with 2 stigmas; rachilla often visible in relief on the side of abaxial perigynia, setaceous, as long or slightly longer than achenes; achenes ellipsoid, broadly ellipsoid or almost orbicular, the body light yellow, yellowgreenish, non-glossy surface, 1.1-2.1 x 1.0-1.5 mm, filling more than 2/3 to 3/4 of the perigynium, broadly cuneate or rounded at the base, apex acute, obtuse or truncated; style bases absent or persistent by the bottom of the style. Notes: C. capitata is easily differentiated from other members of the complex by its spreading perigynia with the lowermost sometimes even descending, similar to the morphological condition separating the species pair C. typhina Michaux and C. squarrosa L. It can also be easily recognized from all other members of the complex by its pistillate scales, shorter and narrower than the perigynia; its small staminate portion; the presence of some redness in the perigynia and glabrous perigynia. Distribution: Europe (ICE, NOR, SWE, FIN, GER, AUT, SWI, ITA); N Russia; N North America (ASK, YUK, NWT, BRC, ABT, SAS, MAN, ONT, GNL). Ecology: Tundra, taiga (boreal forest) and alpine and subalpine areas, in various humid soils (fens, mires, meadows). Carex arctogena Harry Sm., Acta Phytogeogr. Suecica (1940), 13:193. Type: Sweden, Torne Lappmark, karesuando, Moskana ca. 1000 m.s.m. 26/7 1933, Harry Sm. (UPS Holotype) photo! (Fig. A.13 in Appendix) List of specimens studied: Argentina, Dept. Chos Malal, 2300 m, Boelcke, O., Correa, M.N.; Bacigalupo, N.M., 30.1.1964, (BAA, 11368). Dept. Chos Malal, 2300 m, Boelcke, O., Correa, M.N.; Bacigalupo, N.M., 30.1.1964, (BAA, 11368).A, Mendoza, 80 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Cordillera del Rio Barrancas, Kurtz, F., 16.11.1888, (MICH). Canada, Alberta, Mercoal, Rousseau, J., 18.7.1947, (COLO, 13811). Alberta, Mercoal, 4300 ft, Malte, M.O., Watson, W.R., 8.8.1925, (RM, 280606). British Columbia, Pine Pass, 1402 m, Argus, G.W., 12.7.1973, (CAN, 372267). British Columbia, 7228 ft, Calder, J., 149035, Parmelee, J.A.; Taylor, R.L., 8.8.1956, (COLO, 149035). British Columbia, Mount Apex, 7100 ft, Calder, J., Savile, O., 11.8.1953, (RM, 252249). Manitoba, Fort Chimo, Rousseau, J., 14.8.1951, (WIN, 22355). Manitoba, Baralzon Lake, Scoggan, H.J., 22434, Baldwin, W.K.W., 28.7.1950, (WIN, 22434). Manitoba, Hudsons Bay Co., Duck Lake, Scoggan, H.J., Baldwin, W.K.W., 10.8.1950, (WIN, 22435). Manitoba, Fort Chimo, Legault, A., 22.7.1963, (COLO, 491481). Manitoba, Hudsons Bay Co., Duck Lake, Scoggan, H.J., Baldwin, W.K.W., 10.8.1950, (CAN, 201506). Manitoba, Baralzon Lake, Scoggan, H.J., Baldwin, W.K.W., 30.7.1950, (CAN, 202500). Manitoba, Nueltin Lake, Baldwin, W.K.W., 26.7.1951, (CAN, 212816). Manitoba, Cochrane River, Baldwin, W.K.W., 3.7.1951, (CAN, 212817). Manitoba, Baralzon Lake, Scoggan, H.J., Baldwin, W.K.W., 28.7.1950, (CAN, 201507). NewfoundlandLabrador, Esker area, 838 m, Mäkinen, Y.,Kankainen, E., 21.7.1967, (CAN, 314758). Canada, Newfoundland-Labrador, Twin Falls, Hustich, I., 6.7.1967, (CAN, 313311). Nunavut, Upper Hood River, 100 m, Gould, W..7.1995, (COLO, 475773). Ontario, Kenora District, Patricia Portion, Riley, J.L., 12.8.1980, (CAN, 462937). Ontario, Hudson Bay Lowlands, Porsild, A.E., Baldwin, W.K.W., 4.7.1957, (CAN, 278707). Quebec, Fort Chimo, Sørensen, T., 17.8.1959, (C). Quebec, Baie d'Ungava, Blondeau, M., 1.8.1993, (WIN, 53902). Quebec, Baie d'Ungava, Rousseau, J., 23.7.1951, (WIN, 22356). Quebec, Lac Jaucourt Region, Lichteneger Lake, 487 m, Argus, G.W., 16.7.1974, (CAN, 3779977). Quebec, Boatswain Bay, Baldwin, W.K.W.,Hustich, I.; Kucyniak, J.; Tuomikoski, R., 8.7.1947, (CAN, 17333). Quebec, Lac Payne, Legault, 81 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex A., 2.8.1965, (CCO, 23398). Quebec, Northern Quebec, Lake Payne, Legault, A., 210789, Brisson, S., 2.8.1965, (COLO, 210789). Quebec, Ungava, Husons Bay, Dutilly, A., 233644, Lepage, E., 21.3.1945, (RM, 233644). Quebec, Fort Chimo, Calder, J., 31.7.1948, (RM, 255325). Quebec, Hudson Bay, Cairn Island, Abbe, E.C., Abbe, L.B.; Marr, J., 30.7.1939, (RM, 252521). Quebec, Hudson Bay, Great Whale River, Calder, J., Savile, O. Kukkonen, I., 8.8.1959, (RM, 260486). Quebec, Lac Kopeteokash, Rousseau, J., 18.7.1947, (RM, 228636). Saskatchewan, Vicinity of Patterson Lake, Argus, G.W., 20.7.1963, (CAN, 282691). Saskatchewan, Northeastern Saskatchewan, Patterson Lake, Argus, G.W., 20.7.1963, (RM, 277437). Finland, Enontekiö, Kilpisjärvi, Saana, 750 m, Roivainen, L., 8.7.1935, (H, 127310). Enontekiö, Kilpisjärvi, Saana, 750 m, Väre, H., 29.7.2004, (H, 805587).A, Enontekiö Lapland, 825 m, Väre, H., 17.7.2006, (H, 809948). Inari, Vätsäri Wilderness Area, Kulmala, H., 27.7.1996, (H, 717201). Lapponia Imandrae, Lindén, J., 18.7.1891, (H, 325665). Lapponia Imandrae, Axelson, W.M., Borg, V., 24.7.1901, (H, 325667). Lapponia murmanica, 550 m, Brotherus, V.F., .8.1887, (H, 325639).A, Petsamo, Cajander, A., 10.7.1927, (H, 325644). Porojärvet, Toskalhar, 950 m, Roivainen, H., Ollila, L., 15.7.1955, (H, 127313).A, Porojärvet, Toskalhar, 910 m, Roivainen, H., 15.7.1966, (H, 179889). Foutell, C.W., Jalan, M.J., 10.8.1899, (H, 325657). Germany, Altevatn, 500 m, 17.8.1967, (M, 0151943). Greenland, Arfersiorflk, Itjvdljarssuk, 75 m, Fredskild, B., Dalgaard, V., 19.7.1987, (COLO, 456814). Groenlandia meridionalis, Kangerdluarssuk, Hansen, C., Hansen, K.; Petersen, M., 4.7.1962, (CAN, 282521). Nigerdleq, Jørgensen, L.B., 15.7.1966, (CAN, 311369). Vestgrønland, Pingorssuaq Kitdleq, 400 m, Hanfgarn, S. 3, 11.8.1983, (C). Tugtilik Lake, 10 m, Elsley, J.E. 15.8.1967, (M, 0151948). Lagerkranz, J., 2.8.1936, (RMS, 153944). Norway, Finnmark, Sör-Varanger, Bugöynes, Toivonen, H., 30.7.1971, (H, 1081734). Finnmark, Sör-Varanger, Bugöynes, Toivonen, 82 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex H. 30.7.1971, (H, 1081733). Nordland, Narvik hd., Skjomen, Skifte, O., GRaff, G.; Spjelkavik, S., 11.8.1973, (H, 1679404). Norland, Sulitjelma, Skifte, O., 1.8.1962, (DAO, 285800). Sverige, Abisko, Paddas, Lid, J., 1300264, 2.8.1950, (H, 1300264). Troms, Bardu, Leinavatn, 498 m, Engelskjøn, T., Engelskjøn, E.M., 7.7.1977 (C). Troms, Bardu, Altevatn, 580 m, 18.8.1967, (M, 0151942). Troms, Bardu, Kampaksla, 780 m, Engelskjøn, T., Skifte, O., 9.8.1978, (H, 1685049). Russia, Petsamo, Petchenga, Vouvatusjärvi, Piirainen, M., 27.7.1995, (H, 1682990). Sweden, Torne Lappmark, Karesuando, 1000 m, Smith, H., 26.7.1933, (DAO, 257429). Torne Lappmark, Karesuando, 1000 m, Smith, H., 26.7.1993, (H, 1652844). Torne Lappmark, Jukkasjärvi parish, 550 m, Alm, G., Smith, H., 23.7.1939, (H, 1300259). USA, New Hampshire, Coos Co., Mt. Washington, Hodgon, A.R., Gale, M., 30.6.1950, (DAO, 257427). New Hampshire, White Mountains, Mt. Washington, Forbes, F., 9.8.1902, (RMS, 242089). New Hampshire, Alpine Garden, Mt. Washington, Sargent, F.H., 5.7.1942, (BRY, 143916). New Hampshire, Alpine Garden, Mt. Washington, 5000 ft, Löve, A., Löve, D., 27.7.1958, (COLO, 288736). New Hampshire, Alpine Garden, Mt. Washington, Löve, A., Löve, D., 3.7.1960, (COLO, 295019). New Hampshire, White Mountains, Mt. Washington, Forbes, F., 9.8.1902, (RM, 50212). New Hampshire, White Mountains, Mt. Washington, Eggleston, W.W., 29.7.1899, (RM, 44595). New Hampshire, Alpine Garden, Mt. Washington, Eggleston, W.W., 29.7.1899, (RM, 23379). New Hampshire, White Mountains, Faxon, C.E., 1.9.1877, (CAN, 162720). ≡ C. capitata L. ssp. arctogena (Harry Sm.) Hiit., Luonnon YstЉvЉ 48: 52-64. (H) photo! (≡ C. capitata L. ssp. arctogena (Harry Sm.) Böcher, in Medd. om Grønl.147(9), 1952. Isonym) 83 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex ≡ C. capitata L. var. arctogena (Harry Sm.) Hultén, Kungl. Sv. Vet. Ak. Handl. (1958), 4 (7):38. Uppsala. Type: Sweden, Torne Lappmark, Karesuando, Moskana ca. 1000 m.s.m. 26/7 1933, H. Smith. (UPS) photo! ≡ C. capitata f. arctogena Raymond, Contrib. bot. Univ. MontrЋal (1949), 64:38. = C. capitata f. alpicola Andersson, Bot. Not. (1849), 2. = Carex antarctogena Roiv., Ann. Soc. Zool. Bot. Fenn. Vanamo (1954), 28 (2): 197198. Type: [Chile, Tierra del Fuego] Estancia Vicuña, in palude. H. Roivanen (H Holotype) photo! Carex rahuiensis Kurtz. ex. Kükenth., Bot. Jahrb. (1900), 27:495 - nomen nudum, according to Smith (1940). Kurtz based Carex rahuiensis on plants he collected in Argentina (Kükenthal 1900). According to Smith (1940) it is nomen nudum, although he did not see any specimen from Kurtz’s collections. Carex antarctogena was described by Roivanen on the basis of Argentinian specimens which he considered to be more robust in structure and to have a greater number of staminate flowers and perigynial teeth than C. arctogena from the northern Hemisphere. The present morphological study does not support these observations since specimens from South America are not statistically significant bigger than the North American or European specimens (Table 2.7). Both species will therefore be considered as synonyms here. In Chapter 3, molecular analyses show no genetic differences between C. arctogena samples from the northern vs. southern Hemisphere in the three chloroplast regions and five nuclear loci studied. Herb forming loose to dense tussocks. Roots sometimes short-creeping, yellow or reddish. Culms 10-33 cm tall and 0.5-1.1 mm wide in diameter at the middle, slender, 84 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex wiry, more or less dentate on the margins and dense towards the apex. Leaves erect, 3-5 per culm, old leaves persistent, shorter or as long as the culm; leaf sheaths dark red or brown at the base, sparingly filamentose; blades 9-29 cm and 0.4-1.0 mm wide at the middle, filiform, stiff, erect or recurving, truncate mouth; ligule very short, obtuse or nearly truncate. Spike solitary, androgynous, globose, ovoid or trigonal, with staminate portions covering 20 % to 37 %, fairly densely packed, 5.2-9.8 mm long x 2.9-4.7 mm wide, staminate flower portion 1.2-3.7 mm long x 0.5-1.3 mm wide, pistillate flowers portion 3.5-6 mm long, 5-26 staminate flowers, 9-32 pistillate flowers; bract absent, rarely present; staminate scales erect, obovate, broadly obovate or ovate, the body yellow or olive-brown with hyaline margins located in the distal 1/3, 0.1-0.2 mm wide, often folded, glabrous, 1.0 to 2.8 mm long x 0.7 to 1.6 mm wide, with 1-3 veins, apex acute; stamens with anthers 0.6-1.4 mm long; pistillate scales ovate or broadly ovate, the body yellow, orange-brown or dark brown with hyaline margins rarely absent and typically occupying the proximal and distal portions, length of 0.1-1.0 mm in the central portion and 0.4-2.6 mm along the edges in a triangular shape, no nerve or one, incomplete, glabrous, 1.0-2.6 x 1.4-3.0 mm shorter than the perigynia and reaching 3/4 of perigynia body length or until the base of the beak, wider or little narrower than perigynia; distal perigynia erect or ascending, proximal mostly spreading, the body greenish or yellow on the proximal half and dark grayish, yellow-green or brownish green in the distal half, surface glossy, 1.5-3.2 x 1.0-2.0 mm, 0.8-1.4 mm, margins sometimes winged especially in the proximal half and 0.1-0.3 mm wide, almost always scabrous (1-16 teeth), cuneiform base, abruptly contracted into a beak; beak brown, dark-brown or olive-brown, apex orange or hyaline, 0.3-0.9 mm long and 0.2-0.3 mm wide at base, mostly straight, bifid; gynoecium with 2 stigmas; rachilla often visible in relief on the side of abaxial perigynia, setaceous, as long or slightly longer than the 85 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex achene; achenes ellipsoid, broadly ellipsoid or almost orbicular, the body greyish, yellow or dark, non-glossy surface, 1.4-1.9 mm long x 0.7-1.7 mm wide, filling more than 3/4 of the perigynium, broadly cuneate or rounded at the base, apex obtuse or truncated; style bases absent or persistent by the bottom of the style. Notes: C. arctogena is differentiated from all other members of the complex by its pistillate scales, broader and as long or longer than the perigynia; its scabrous perigynia, and its hyaline margins along pistillate scales, which have a triangular shape and which can cover up to half of the surface of the scale. It is most similar to C. cayouetteana subsp. cayouetteana and C. cayouetteana subsp. altasierra but they can be easily separated by the characters mentioned above. Distribution: Europe (NOR, SWE, FIN); N Russia; N North America (NUN, BRC, SAS, MAN, ONT, QUE, NFL, GNL, NWH) and S South America (AGS, CLC). Ecology: Arctic-alpine areas and wind-exposed alpine heaths, in soils with low water content. Carex cayouetteana subsp. cayouetteana Holotype: Canada, Alberta: Banff National Park, Snow Creek Pass, A.E. Porsild 22673 (CAN-266077). Paratype: USA, Colorado: Clear Creek Co., Loch Lomond, W.A. Weber, T. Koponen & P. Nelson s.n. (CAN-374041). Herb forming loose tussocks. Roots light brown to yellowish. Culms 11-26 cm tall and 0.6-1.1 mm in diameter at the middle, slender, wiry, more or less dentate on the margins and dense towards the apex. Leaves 3-6(7) per culm, old leaves persistent, shorter than culm; leaf sheaths yellow or light brown at the base, sparingly filamentose; blades11-19 86 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex cm long and 0.4-0.9 mm wide in the middle; ligules obtuse or nearly truncate. Spike solitary, androgynous, trigonal to ovoid, lanceolate, with staminate portions wider at the bottom and covering 50 % to 60 %, densely packed, of 6.1-12.8 mm long x 3.5-6.1 mm wide, staminate portions from 0.9- 6.7 x 1.5-2.9 mm, pistillate 3.9-6.4 mm long, 15-26 staminate flowers, 17-32 pistillate flowers; bract absent or rarely when present; staminate scales erect, broadly obovate or ovate, the body dark brown or yellowish, central bands are not clearly delineated with hyaline margins located in the 1/3 distal and 0.1-0.15 mm wide, often folded, glabrous, 1.8-3.0 x 0.6-1.9 mm, with 1-2 veins, apex acute, subacute or rounded; pistillate scales ovate or broadly ovate, the body dark brown, hyaline margins absent or occupying the distal portions, length of 0.1-1 mm in the central portion and 0.1-0.5 mm crossing the edges, one nerve clearly marked and surrounded by light brown or light yellow, glabrous, 1.5-3.4 x 1.2-2.5 mm shorter than the perigynia and reaching full or 3/4 of body length perigynia, wider or as wide as perigynia, apex rounded, truncated or obtuse; perigynia distal erect or ascending, most proximal spreading, the body greenish-yellow in proximal part, dark brown to brown in the half distal until top of the achene, surface gloss with some redness, 1.5-3.4 x 1.2-2.5 mm, 0.6-1.5 mm, margins sometimes with nerves, almost scabrous (0-5(7) teeth), obtuse angle at the bottom, acute apex contracted smoothly into a beak; beak dark brown, apex orange or hyaline, long of 0.9-1.9 mm, mostly straight, teeth acuminate, bifid, smooth; gynoecium with 2 stigmas; rachilla often visible in relief on the side of abaxial perigynia, setaceous, as long as or slightly surpassing; achenes ellipsoid, broadly ellipsoid, the body dark yellow to light brown, glossy surface, 1.0-2.3 x 0.6-1.8 mm, covering over 3/4 volume perigynia, broadly cuneate, rounded or rotund at the base, apex obtuse or truncated, wrinkled; beaks marked by the straight base of the style. 87 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Notes: C. cayouetteana subsp. cayouetteana can be identified by its staminate portion, as long as the pistillate portion, presenting a cone shape; pistillate scales, broader and as long as the perigynium beak, or longer than the perigynia; its scabrous perigynia, usually with 2-3 teeth; its hyaline margins in the pistillate scales, which are around 1 mm wide and go around the edges of the scale, drawing an inverted V shape; its brown perigynia beak and green perigynia body. Carex arctogena can be easily separated from C. cayouetteana subsp. cayouetteana by its staminate portion, shorter and cylindrical in C. arctogena; its hyaline margin with triangular shape; for having more teeth in the margins of the perigynium and less number of perigynia in the spike. Distribution: North American endemic (COL, UTA, WYO, NEV, CAL, WAS, ALB, BRC). Ecology: Tundra and alpine areas, in dry, acidic and rocky soils. 2000 - 3500 m. Etymology: This taxon is named after Jacques Cayouette, a passionated botanist who has spent his life working extensively in North American sedges and particularly in Québec. C. cayouetteana subsp. bajasierra Holotype: USA, California: Butte Co., near Cherry Hill Campground, Lassen National Forest, J. Starr 10S-054 & T. Villaverde. Paratypes: USA, California: El Dorado County, Lake Tahoe Basin Management Unit, J.R. Starr & J. Thibeault 07-44 (CAN). California: Sierra County, Tahoe National Forest, J.R. Starr & J. Thibeault 07-52 (CAN). California: Butte Co., Lassen National Forest, Forest Ranch, Cheery Hill meadows, near Cherry Hill campsite. J.R. Starr & J. Thibeault 06016 (CAN). California: Sierra Co., Yuba Pass-Weber Lake Road, V.H. 88 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Oswald & L. Ahart 8221 (CHSC-66824). California: Tehama Co., L. Ahart 13.051 (CHSC-94326). Oregon: Deschutes Co., C. Halpern 600 & T. Magge (OSC-159046). Herb densely caespitose. Roots light brown, orange or dark yellow. Culms 19-54 cm tall and 0.7-1.0 mm at the middle, slender greenish or yellowish at the base. Leaves 3-5 per culm; leaf sheaths dark brown to light brown at the base, sparingly filamentose; blades 13-27 cm long and 0.5-0.9 mm wide in the middle; ligules, acute, obtuse or nearly truncate. Spike solitary, androgynous, trigonal, slender, with staminate portions covering 50 % to 70 %, loosely packed, of 6.8-16.9 mm x 3.2-4.6 mm, staminate portions 2- 10.5 x 1-1.5 mm, pistillate 3.5-6 mm long, 30-37 staminate flowers, 815(30) pistillate flowers; bract absent or rarely when present; staminate scales erect, obovate, broadly obovate or ovate, the body light brown to light yellow in the middle portion, central bands are clearly delineated, hyaline margins located in the 1/3 distal and 0.1-0.25 mm wide, often folded, glabrous, 1.6-2.9 x 0.8-1.8 mm, 1 vein, apex truncate or rounded; stamen with anthers 2-2.6 mm long; pistillate scales ovate or broadly ovate, the body brown to light brown, orange towards the edges with hyaline margins absent or occupying the proximal and distal portions, length of 0.1-0.3 mm in the central portion and 0.1-1.8 mm crossing the edges, one nerve marked, glabrous, 1.22.7 x 1.4-2.2 mm longer, sometimes as long as or shorter than the perigynia, reaching 3/4 of body length perigynia, wider and the bottom, a little narrower or about the same width as perigynia in the distal portion; perigynia distal erect or ascending, proximal spreading, the body greenish yellow in 1/2 proximal, dark brown or light brown in the half distal surface, gloss stinks, 1.5-3.1 x 1-2 mm, 1.2-2.2 mm body length perigynia, almost always smooth (0-3 teeth), base subacute or rounded, apex contracted smoothly into a beak; beak brown to dark brown, apex orange or hyaline, mostly straight, teeth acuminate, bifid; gynoecium with 2 stigmas; rachilla often visible in relief on the side of 89 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex abaxial perigynia, setaceous, as long as or slightly surpassing, 1.2-1.9 x 1 mm; achenes ovoid or almost orbicular, the body light brown, glossy surface, 1-2 x 0.5-1.4 mm, covering over 3/4 volume perigynia, rounded at base, apex obtuse or truncated; beaks absent or marked by the straight base of the style. Notes: C. cayouetteana subsp. bajasierra is easily differentiated by its staminate portion, usually longer than the pistillate portion; its perigynia ascending, loosely packed; its long culms, much longer than the leaves. It occurs in wet meadows at low elevations in California. Distribution: Western North American endemic (CAL, ORG). Ecology: Wet meadows in boreal areas, in soils with high water content. 1400 - 2300 m. C. cayouetteana subsp. altasierra Holotype: USA, California: Tulare Co., Sierra Nevada, Army Pass, J.T. Howell s.n. (DAO-257423). Paratypes: USA, California: Inyo Co., Mono Mesa, J.T. Howell 22750 (WTU-137524). California: Northeastern Tulare Co., Sierra Nevada, Central Basin, Lower lake, P.A. Munz 12669 (WTU-133536). Herb forming loose to dense tussocks, caespitose. Roots light yellow or light brown. Culms 8-20 cm tall and 0.7-1.0 mm in diameter at the middle. Leaves 3-4(7) per culm, 90-290 x 0.4-1.0 mm; leaf sheaths brown-dark red or orange, sparingly filamentose; blades 8-14 cm long and 0.4-0.9 mm wide in the middle; ligules, acute, obtuse or nearly truncate. Spike solitary, androgynous, ovoid or trigonal, with staminate portions covering 35 % to 60 %, densely packed, of 6.2-8.5 mm x and 2.5-4.0 mm, staminate portions from 2.2-4.9 x 1.2-1.7 mm, pistillate 2.0-4.2 mm long, 26-30 staminate 90 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex flowers, 14-16 pistillate flowers; bract absent or rarely when present; staminate scales erect, obovate, broadly obovate or ovate, the body pale yellow, light brown to dark brown, central bands are clearly delineated with hyaline margins located in the 1/3 distal and 0.1-0.2 mm wide, often folded, glabrous, 1.9-2.5 x 0.9-1.2 mm, with 1 vein, apex acute to subacute; pistillate scales the body dark brown, light brown to orange towards the edges, hyaline margins occupying the proximal and distal portions, length of 0.1-0.5 mm in the central portion and 0.1-2.0 mm crossing the edges, central nerve rarely present, ovate or broadly ovate, glabrous, 1.8-2.1 x 1.15-2.0 mm, as long as or shorter than the perigynia and reaching 3/4 of body length perigynia until the base of the beak, wider or as wide as perigynia in the bottom and narrower than perigynia in the distal part, subacute apex, scarbid; perigynia erect or ascending in the distal part, mostly spreading in the proximal part, the body greenish or light yellow in 1/2 proximal part with some redness, dark brown in the half distal portion, not very gloss surface, 2.0-3.8 x 1.1-1.9 mm, 1.4-2.2 mm body length perigynia, almost always smooth (0-1(16) teeth), rounded to subacute base, beak often abruptly or subacutely contracted; beaks brown to dark brown, apex orange or hyaline, mostly straight, teeth truncate, smooth, bifid; gynoecium with 2 stigmas; rachilla often visible in relief on the side of abaxial perigynia, setaceous, as long as or slightly surpassing; achenes ellipsoid, broadly ellipsoid, lenticular or almost orbicular, the body grayish to light brown, non-glossy surface, 1.4-2.6 x 1.0-1.9 mm, covering over 3/4 volume perigynia, at base broadly truncated or rounded, apex obtuse or truncated; beaks absent or marked by the straight base of the style. Notes: C. cayouetteana subsp. altasierra can be differentiated by its short culms, as long as the leaves; its staminate portion, as long as or slightly longer than the pistillate portion, presenting a cone shape; its pistillate portion, densely packed. It occurs in high 91 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex elevations in California. Carex arctogena can be easily separated from C. cayouetteana subsp. altasierra for having longer culms, longer spikes, straight tip leaves and for having its lowermost perigynia horizontally orientated. Distribution: Southwestern North American endemic (CAL). Ecology: Non-glaciated plateaus and wet banks. 3400 - 3900 m. 92 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex References Balakrishnan R. (2005) Species concepts, species boundaries and indentification: a view from the tropics. Systematic Biology, 54, 689–693. species Ball P.W., Reznicek A.A., & Murray D.F. (2002) Cyperaceae. In Flora of North America North of Mexico. Oxford University Press, New York. Cayouette J. (2007) Carex section Capituligerae. Flore du Quebéc-Labrador nordique. . Egorova T.V. (1999) The sedges (Carex L.) of Russia and adjacent states (within the limits of the former USSR). St. Petersburg State Chemical-Pharmaceutical Academy, Missouri Botanical Garden Press, St. Petersburg; St. Louis Mo. Ertter B. (2000) Floristics surprises in North America North of Mexico. Annals of the Missouri Botanical Garden, 87, 81–109. Frankham R., Ballou J.D., Dudash M.R., Eldridge M.D.B., Fenster C.B., Lacy R.C., Mendelson J.R., Porton I.J., Ralls K., & Ryder O. a. (2012) Implications of different species concepts for conserving biodiversity. Biological Conservation, 153, 25–31. Global Carex Group (2015) Making Carex monophyletic: a new broader circumscription. Botanical Journal of the Linnean Society, in press, . Govaerts R., Simpson D., Wilson K., Egorova T., Koopman J., & Bruhl J. (2014) World Checklist of Cyperaceae. Facilitated by the Royal Botanic Gardens, Kew. Available at: http://apps.kew.org/wcsp/ (accessed 2 March 2014). Jiménez-Mejías P. & Cabezas F. (2009) Schoenoplectus heptangularis Cabezas & Jiménez Mejias (Cyperaceae), a new species from Equatorial Guinea. Candollea, 64, 101–115. Jiménez-Mejías, P. & Luceño, M. (2011) Cyperaceae. – In: Euro+Med Plantbase - the information resource for Euro-Mediterranean plant diversity. http://ww2.bgbm.org/EuroPlusMed/PTaxonDetail.asp?NameCache=Cyperaceae& PTRefFk=7400000 Jiménez-Mejías P., Luceño M., & Martín-Bravo S. (2014) Species Boundaries within the Southwest Old World Populations of the Carex flava Group (Cyperaceae). Systematic Botany, 39, 117–131. Kreczetowitcz V.I. (1932) Contributiones ad cognitionen Caricum subgeneris Vignea (P. B.) Ness. Bull. Jard. Bot. Acad. Sci. URRS, 30, 117–139. Moore D.M. & Chater A.O. (1971) Studies on bipolar species I. Carex. Botaniska Notiser, 124, 317–334. 93 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Murray D.F. (2002) Flora of North America. (ed. by Flora of North America Editorial Committe), pp. 569–570. Oxford Univ Press, New York and Oxford. Naczi R.F.C. (1993) Carex brysonii and Carex godfreyi, new species of Carex section Griseae (Cyperaceae) from the southeastern United States. Contributions from the University of Michigan Herbarium, 19, 195–205. Naczi R.F.C., Bryson C.T., & Cochrane T.S. (2002) Seven new species and one more combination in Carex (Cyperaceae) from North America. Novon, 12, . Naczi R.F.C., Reznicek A.A., Ford B.A., Heights H., Arbor A., Bryson C.T., Catling P.M., Borne L.R., Freeman J.D., A S., Research E., & Drive N. (1998) Morphological, geographical, and ecological differentiation in the Carex willdenowii complex (Cyperaceae). American Journal of Botany, 85, 434–447. Nilson Ö. (1991) Nordisk fjällflora.Bonnier Fakta Bokförlag AB. Nordal, I, 14, 377– 388. Olson D.M., Dinerstein E., Wikramanayake E.D., Burgess N.D., Powell G.V.N., Underwood E.C., D’amico J.A., Itoua I., Strand H.E., Morrison J.C., Loucks C.J., Allnutt T.F., Ricketts T.H., Kura Y., Lamoreux J.F., Wettengel W.W., Hedao P., & Kassem K.R. (2001) Terrestrial Ecoregions of the World: A New Map of Life on Earth. BioScience, 51, 933–938. R Development Core Team (2011) R: a language and environment for statistical computing. Version 2.12.2. Available at: http://www. R-project.org. . Raymond M. (1949) Notes sur le genre Carex II. La valeur taxonomique de C. arctogena. Contributions de l’Institute Botanique de l'Université de Montréal, 64, 37–41. Reinhammar L.G. & Bele B. (2001) Variation in morphological characters and habitat requirements in Carex capitata and Carex arctogena (Cyperaceae) in Norway and Sweden. Nordic Journal of Botany, 21, 497–512. Rothrock P.E. (1997) Taxonomy of the Carex straminea complex (Cyperaceae). Canadian Journal of Botany, 75, 2177–2195. Saarela J.M. & Ford B.A. (2001) Taxonomy of the Carex backii complex (sect. Phyllostachyae, Cyperaceae). Systematic Botany, 26, 704–721. Schulyer A.E. (1971) Scanning electron microscopy of achene epidermis in species of Scirpus (Cyperaceae) and related genera. Proceedings of the National Academy of Sciences, 123, 29–52. Smith H. (1940) Carex arctogena nova species. Acta Phytogrographyca Suecia, 13, 191–200. 94 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Standley L.A. (1987) Anatomical Studies of Carex Cuchumatanensis, C. decidua, and C. hermannii (Cyperaceae) and Comparisons with North American Taxa of the C. acuta Complex. Brittonia, 39, 11. Starr J.R. & Ford B. A. (2001) The taxonomic and phylogenetic utility of vegetative anatomy and fruit epidermal silica bodies in Carex section Phyllostachys (Cyperaceae). Canadian Journal of Botany, 79, 362–379. Starr, J.R. Starr, Janzen, F.H. & Ford, B.A. (2015) Three new, early diverging Carex (Cariceae, Cyperaceae) lineages from East and Southeast Asia with important evolutionary and biogeographic implications. Molecular Phylogenetics and Evolution, 88, 105–120. Stuessy, T.F. (2009) Plant taxonomy: the systematic evaluation of comparative data. Columbia University Press. Thiers, B. [continuously updated]. Index Herbariorum: A global directory of public herbaria and associated staff. New York Botanical Garden's Virtual Herbarium. http://sweetgum.nybg.org/ih/ Toivonen H. & Timonen T. (1976) Perigynium and achene epidermis in some species of Carex, subg. Vignea (Cyperaceae), studied by scanning electron microscopy. Annales Botanici Fennici, 13, 49–59. Valcárcel V. & Vargas P. (2010) Quantitative morphology and species delimitation under the general lineage concept: Optimization for Hedera (Araliaceae). American Journal of Botany, 97, 1555–73. Waterway M.J., Hoshino T., & Masaki T. (2009) Phylogeny, Species Richness, and Ecological Specialization in Cyperaceae Tribe Cariceae. The Botanical Review, 75, 138–159. Willmann R. & Meier R. (2000) A critique from the Hennigian species concept prespective. In Species concepts and phylogenetic theory. (ed. by Q.D. Wheeler and R. Meier), pp. 101–108. Columbia University Press, New York. Zhang S.R. (2006) Micromorphology of the achene epidermis of Kobresia (Cyperaceae) revealed by SEM and its taxonomic significance. Nordic Journal of Botany, . 95 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex 96 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Appendix S1 97 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Supporting Tables Table 2.1: Diagnostic morphological characteristics used by Smith (1940) and Nilson (1991) to differentiate C. capitata from C. arctogena (taken from Reinhammar 1999). Character Spike size Carex capitata 6-9 mm long, light brownishgreen On average 2.5 mm long and 1.8 mm wide Pear-shaped, with a beak about 1/5 of the total length; smooth in the upper part Carex arctogena 3-6 mm long, dark brownish-green Pistillate scale length Beak length Shorter than the achenes As long as the achenes On average 0.4 mm Leaf length Leaves shorter than culms Tussock density Habitat demands Loose tussocks On average 0.6 mm; achene more abruptly contracted into a beak Leaves as long or longer than the culms Dense tussocks Achene size Achene shape On average 1.9 mm long and 1.5 mm wide More rounded, with a beak about 1/3 of the total length; provided with 3-5 small, sharp, teeth in the upper part In rich mires, and along Wind-exposed heaths in rather dry riverlets; calciphilous; habitats; weakly calciphilous, also on lowlands subalpinelowalpine serpentine; mostly alpine, but occurs rarely in subalpine habitats 98 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table 2.2: Associates of C. arctogena in South America Locality Collection Elevation Associates No. (m) Argentina:Tierra J. Starr 60 Erigeron myosotis, Phleum alpinum, del Fuego, Rio 10015 & T. Caltha sagittata, Cerastium arvense, Grande Villaverde Carex macloviana and C. canescens Argentina: Santa J. Starr 732 Cruz, Los 10020 & T. Glaciares National Villaverde Park Nothofagus antartica, Marsippospermum grandiorum, Chiliotrichum diffusum, Escallonia sp., Carex microglochin, C. banksii, C. atropicta, C. canescens,C. decidua, Gaultheria pumila, Empetrum rubrum and Rostkovia magellanica Argentina: Santa J. Starr 449 Cruz, Los 10023 & T. Glaciares National Villaverde Park Carex microglochin, C. magellanica, C. canescens, C. barrosii, Schoenus andinus, Tetroncium magellanicum, Escallonia sp., Empetrum rubrum, Juncus sp., Rubus sp., Chiliotrichum diffusum, Blechnum penna-marina, Gaultheria pumila and Gavilea sp. 99 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table 2.3: Associates of C. cayouetteana subsp. cayouetteana. Locality Collection Elevation pH Associates No. (m) U.S.A.: Colorado, J. Starr 10S- 3602 5 Rhodiola sp., Castilleja sp., Lake Co., San 030, W. Potentilla sp., Salix spp.Bistorta Isabel National Sawtell & T. sp.,Caltha Forest Villaverde leptosepala,Pedicularis groenlandicum and Carex spp. U.S.A.: Colorado, Hinsdale Co., Gunnison National Forest J. Starr 10S- 3834 033, W. Sawtell & T. Villaverde - Kobresia myosuroides U.S.A.: Montana, Carbon Co., Custer National Forest, AbsarokaBeartooth Wilderness U.S.A.: Wyoming, Park Co., Shoshone National Forest, Beartooth Plateau U.S.A.: Washington, Whatcom Co., BakerSnoqualmie National Forest J. Starr 10S- 3137 047A, W. Sawtell & T. Villaverde 5.4 Carex scirpoidea and Kobresia myosuroides. It has also been reported to occur with Cassiope mertensiana, Siebbaldia procumbens and Stellaria spp. J. Starr 10S- 3291 047B, W. Sawtell & T. Villaverde - - J. Starr 10S- 1984 061, W. Sawtell & T. Villaverde 5 Phyllodoce empetriformis Table 2.4: Associates of C. cayouetteana subsp. bajasierra. Locality Collection Elevation pH Associates No. (m) U.S.A.: California, J. Starr 10S- 1441 7.7 Calocedrus decurrens, Butte Co., near 054 & T. Pseudotsuga menziesii, Cherry Hill Villaverde Pinus ponderosa, Abies Campground, Lassen magniffca, Darlingtonia National Forest californica, Drosera anglica, and Spiranthes sp. U.S.A.: Deschutes Deschutes Forest Oregon, J. Starr 10S- 1927 Co., 057 & T. National Villaverde 100 5.8 Kobresia myosuroides ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table 2.5: Morphological characters studied. Continuous characters used by Egorova (1999) to differentiate between C. capitata and C. arctogena and those used in a pilot study to differentiate between C. cayouetteana subsp. cayouetteana, C. cayouetteana subsp. bajasierra and C. cayouetteana subsp. altasierra are denoted by asterisks. Character Continuous variables CLMHT Definition Description Culm length distance from the base of the culm to the base of the spike for the longest culm present (current and previous years) CLMH* Culm length CULMW Culm width LEAFL Leaf length LEAFW Leaf width INFLOL* Inflorescence length INFLOW* Inflorescence width same as CLMHT but present year growth only width of the longest culm in the medial portion longest leaf from the base of the pseudoculm to the tip width of the longest leaf in the medial portion maximum length from base of the spike to the bottom of the uppermost perigynium beak (=PERBKL) maximum width of the spike from the base of the perigynium beak (=PERBKL) MSPL* Inflorescence staminate length distance from the top of the portion proximal staminate scale to the apex Inflorescence pistillate length distance from the base of the spike portion to the base of the most distance pistillate beak (=PERBKL) Length of the pistillate longest hyaline margin from the distal scale hyaline margin point of the proximal pistillate scale FPPL* GLUMH* GLUMHC* Length of the pistillate narrowest hyaline margin from the distal scale hyaline margin point of the proximal pistillate scale FSCL* Length of the pistillate maximum scale length of the proximal scale perigynium Pistillate scale width maximum scale width of the proximal perigynium Maximum pistillate length distance from FSCW to the base of scale width the scale Perigynium length maximum length of the perigynium including the beak FSCW* FSCWL PERIGL* 101 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex PERBKL PERIGW* PERIWD ACHL ACHW MSCL* MSCW Discrete variables LEAFN PSA PERIGA Beak length distance from distal point of the perigynium to the distal point of the achene Perigynium width maximum width of the perigynium Maximum perigynium length distance from PERIGW to the base width of the perigynium Achene length maximum achene length Achene width maximum achene width Staminate scale length maximum scale length at the medial part of the staminate portion of the inflorescence Staminate scale width maximum scale width at the medial point of the staminate portion of the inflorescence Leaf number along the longest culm Angle of the distal edge less than or greater than 45º of the pistillate scale CULMD Perigynium beak straight or bent inclination Perigynium angle less than or greater than 45º Perigynium teeth along the margins of the perigynium number Culm teeth number number within the distal 1mm of the culm Qualitative variable CULMC Culm sheath colour PERIGBo TEETHN brown, red-brown, red-purple or purplebrown 102 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table 2.6: Mean ±1 SD and ranges for 22 morphological characters measured for the C. capitata complex. Character abbreviations correspond to those described in Table 2.5. All measurements are in millimeters. N = sample size. Characte r CLMHT CLMH LEAFL CULMW LEAFW INFLOW MSPL GLUMH GLUMH C INFLOL FPPL FSCL FSCW FSCWL PERIGL PERBKL PERIGW PERIWD ACHW C. capitata C. arctogena (N=38) 296.45±70.5 (150-490) 272.10±82.3 (120-490) 205.92±50.0 (115-360) 0.75±0.09 (0.6-1) 0.59±0.19 (0.4-1.5) 4.41±0.48 (3.3-5.4) 1.95±0.65 (0.8-3.5) 0.56±0.62 (0.01-2.25) 0.19±0.15 C. cayouetteana subsp. cayouetteana (N=35) (N=28) 204.03±52.1 204.90±30.44 (125.9-335) (142-260) 168.89±44.74 178.29±39.83 (100-280) (116-260) 154.64±47.9 157.49±21.11 (90-298) (115-195) 0.78±0.15 0.89±0.12 (0.5-1.1) (0.6-1.1) 0.62±0.12 0.64±0.13 (0.4-1) (0.4-0.9) 3.83±0.39 4.44±0.61 (2.9-4.7) (3.5-6.1) 2.12±0.68 3.22±1.40 (1.2-3.7) (0.9-6.65) 0.97±0.49 0.53±0.36 (0.4-2.6) (0-1) 0.40±0.17 0.23±0.16 C. cayouetteana subsp. bajasierra (N=24) 354.27±72.37 (225-540) 347.73±75.68 (193-540) 206.97±41.68 (133-270) 0.88±0.08 (0.7-1) 0.65±0.12 (0.5-0.9) 3.86±0.43 (3.2-4.6) 5.36±2.00 (2-10.5) 0.39±0.52 (0.01-1.8) 0.09±0.10 C. cayouetteana subsp. altasierra (N=6) 58.03±24.75 (140-205) 110.78±22.56 (83-140) 113.08±19.27 (85-140) 0.83±0.12 (0.7-1) 0.58±0.17 (0.4-0.9) 3.07±0.69 (2.5-4) 3.05±1.03 (2.2-4.9) 1.35±0.74 (0.01-2) 0.27±0.18 (0.01-0.5) 7.52±1.20 (5.5-10.3) 4.78±0.89 (2.7-7.2) 2.12±0.25 (1.5-2.5) 1.43±0.21 (0.8-1.8) 0.61±0.16 (0.3-1) 2.99±0.45 (1.8-3.6) 1.28±0.24 (0.8-1.7) 1.79±0.21 (1.3-2.2) 0.94±0.20 (0.5-1.3) 1.21±0.13 (0.1-1) 7.34±1.16 (5.2-9.8) 4.46±0.64 (3.5-6) 2.18±0.29 (1.4-3) 1.77±0.34 (1-2.6) 0.68±0.29 (0.1-1.7) 2.65±0.45 (1.5-3.2) 1.13±0.23 (0.7-1.8) 1.50±0.19 (1-2) 0.82±0.19 (0.5-1.3) 1.18±0.18 (0.01-0.3) 11.25±2.33 (6.8-16.9) 5.08±0.83 (3.9-6.9) 2.18±0.33 (1.2-2.7) 1.74±0.24 (1.4-2.2) 0.65±0.24 (0.2-1) 2.35±0.45 (1.5-3.1) 1.01±0.22 (0.7-1.4) 1.66±0.17 (1.2-2.2) 0.77±0.18 (0.4-1) 1.16±0.16 (0.01-0.5) 7.65±0.87 (6.2-8.5) 3.70±0.84 (2-4.2) 1.93±0.12 (1.8-2.1) 1.53±0.35 (1.15-2) 0.60±0.13 (0.4-0.8) 2.55±0.64 (2-3.8) 0.97±0.35 (0.6-1.6) 1.50±0.26 (1.1-1.9) 0.75±0.14 (0.5-0.9) 1.23±0.35 (0-0.5) 9.11±1.63 (6.1-12.8) 5.00±0.80 (3.9-6.4) 2.43±0.24 (1.9-3) 1.73±0.27 (1.1-2.4) 0.77±0.25 (0.1-1.3) 2.80±0.38 (1.5-3.4) 1.23±0.22 (0.9-1.9) 1.96±0.31 (1.2-2.5) 0.81±0.29 (0.3-1.8) 1.23±0.22 103 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex ACHL MSCL MSCW (1-1.5) 1.72±0.21 (1.1-2.1) 2.19±0.26 (1.6-2.9) 1.02±0.23 (0.6-1.5) (0.7-1.7) 1.61±0.15 (1.4-1.9) 1.86±0.35 (1-2.8) 1.12±0.21 (0.7-1.6) (0.6-1.8) 1.59±0.24 (1-2.3) 2.28±0.30 (1.8-3) 1.16±0.27 (0.6-1.9) 104 (0.5-1.4) 1.55±0.23 (1-2) 2.24±0.29 (1.6-2.9) 1.23±0.24 (0.8-1.8) (1-1.9) 1.82±0.43 (1.4-2.6) 2.20±0.20 (1.9-2.5) 1.04±0.10 (0.9-1.2) ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table 2.7: Mean ± 1 SD and ranges for morphological characters measured for C. arctogena from South America vs. North America and Europe. Character abbreviations correspond to those described in Table 2.5. All measurements are in millimeters. N = sample size. Character CLMHT CULMW CLMH LEAFL LEAFW LEAFN INFLOW INFLOL MSPL FPPL GLUMH GLUMHC FSCL FSCW FSCWL PERIGL PERBKL PERIGW PERIWD TEETHN ACHW ACHL MSCL MSCW CULMD C. arctogena from C. arctogena Europe North America (N=10) (N=23) 179.52 ± 32.28 217.54 ± 58.46 7.70 ± 1.64 8.02 ± 1.47 153.10 ± 34.37 72.52 ± 50.73 130.72 ± 29.53 60.61 ± 45.73 6.00 ± 0.67 6.24 ± 1.35 3.80 ± 0.42 3.52 ± 0.79 36.30 ± 3.68 38.43 ± 3.82 72.80 ± 13.85 71.48 ± 9.76 20.60 ± 7.76 20.04 ± 6.11 42.20 ± 6.71 44.96 ± 6.53 8.90 ± 1.73 9.35 ± 5.36 4.40 ± 0.97 4.13 ± 1.98 22.00 ± 2.16 21.04 ± 2.48 17.40 ± 3.17 16.52 ± 3.10 6.50 ± 2.59 7.26 ± 3.08 25.20 ± 3.05 25.87 ± 4.98 11.67 ± 3.24 10.95 ± 2.08 14.70 ± 1.25 14.83 ± 2.04 6.80 ± 1.69 8.91 ± 2.56 4.56 ± 1.13 4.22 ± 3.15 11.89 ± 1.54 11.41 ± 2.02 15.78 ± 1.56 16.36 ± 1.36 18.50 ± 3.69 18.22 ± 2.52 11.20 ± 2.66 10.89 ± 1.35 5.70 ± 3.13 8.30 ± 4.34 from C. arctogena South America (N=6) 221.28 ± 77.22 8.00 ± 2.10 195.99 ± 65.20 94.31 ± 70.21 6.83 ± 1.47 3.33 ± 0.52 43.17 ± 2.79 93.50 ± 20.54 33.17 ± 13.09 51.50 ± 5.47 12.33 ± 4.80 4.00 ± 1.79 24.67 ± 4.46 22.67 ± 2.66 6.50 ± 3.39 30.50 ± 2.59 13.00 ± 1.55 16.83 ± 2.48 9.00 ± 3.16 7.83 ± 3.87 12.67 ± 1.51 15.83 ± 1.72 23.67 ± 5.68 12.83 ± 3.19 7.50 ± 5.01 from Table 2.8: Mann-Whitney significance for pairwise comparisons of each signifcant variable from the Kruskal-Wallis test, ordered by its utility to significantly differentiate between taxa. N denotes no significance, Y denotes significance with p<0.05 and Y* denotes significance with p <0.01. Variables in bold were included in the Principal components analysis. Carex capitata (C), C. arctogena (A), C. cayouetteana subsp. cayouetteana (Y), C. cayouetteana subsp. bajasierra (Y2) and C. cayouetteana subsp. altasierra (Y3). 105 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Variable CLMH CLMHT MSPL LEAFL INFLOL PERIGW GLUMHC INFLOW FSCL MSCW FSCW MSCL CULMW GLUMH ACHL FPPL PERIBKL PERIGL FSCWL PERIWD Y3-Y2 Y Y N Y Y N N N N N N N N N N Y N N N N Y3-Y Y N Y Y N N N Y Y N N N N N N N N N N N Y3-A Y Y Y N N N N N N N N N N N N N N N N N Y3-C Y Y Y Y N N N N N N N N N N N N N N N N 106 Y2-Y Y* Y* Y Y* Y Y Y Y* Y N N N N N N N Y Y N N Y2-A Y* Y* Y* Y* Y* Y Y* N N Y N Y* Y* Y* N Y N N N N Y2-C Y Y Y* N Y* Y Y Y* N Y Y* N Y N Y N Y Y N Y Y-A N N Y N Y* Y* Y Y* Y* N N Y* Y* Y N Y N N N N Y-C Y* Y* Y Y* Y Y N N Y* Y* Y* N N N Y N N N Y N A-C Y* Y* N Y* N Y* Y* Y* N Y Y* Y N Y Y N Y Y N N ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table 2.9: Percentage of the total variance explained by principal component scores of the variables included in di erent PCAs. PC = Ordered principal Component. PC All variables 1 19,401 2 12,4 3 10,989 4 7,6767 5 6,7801 6 6,0676 7 5,2372 8 4,3777 9 3,8413 10 3,4106 11 3,0812 12 2,899 13 2,7171 14 2,2072 15 1,9515 16 1,7454 17 1,3808 18 1,347 19 1,1537 20 1,0073 21 0,21384 22 0,1153 Total 100 12 variables 28,53 16,709 12,48 10,307 7,8787 6,4935 5,0133 4,467 3,0117 2,774 2,1061 0,23034 100 107 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Supporting Figures Figure 1. The distribution of C. arctogena based on all the herbarium specimens examined in this study. Inset represents the distribution in Scandinavia. 108 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 2. Distribution of C. capitata, C. arctogena, C. cayouetteana subsp. cayouetteana, C. cayouetteana subsp. bajasierra and C. cayouetteana subsp. altasierra herbarium specimens used in the morphological study. 109 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 3. Photographs of herbarium sheets of C. cayouetteana subsp. bajasierra identified as C. capitata from CHSC. Inset shows spike and perigynium details. 110 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 4. Photographs of herbarium sheets of C. cayouetteana subsp. altasierra identified as C. arctogena from CAL. Inset shows spike and perigynium details. 111 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 5. Photographs of herbarium sheets of C. cayouetteana subsp. cayouetteana identified as C. arctogena from COLO. Inset shows spike and perigynium details. 112 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 6. Photographs of herbarium sheets of C. arctogena form H. Inset shows spike and perigynium details. 113 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 7. Photographs of a herbarium sheet of C. capitata from H. Inset shows spike and perigynium details. 114 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 8. PCA scatter plot of the first two principal component using C. arctogena specimens from Europe (circles), North America (triangles) and South America (crosses) and 12 quantitative variables. 115 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 9. PCA scatter plot of the first two components using all C. arctogena and C. capitata specimens studied and 12 quantitative variables. Symbols represent C. capitata (circles), C. arctogena from the Northern Hemisphere (triangles) and C. arctogena from the Southern Hemisphere (crosses). 116 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 10. PCA scatter plot of the first two components using all specimens studied of C. arctogena (crosses), C. cayouetteana subsp. cayouetteana (dark gray traingles), C. cayouetteana subsp. bajasierra (medium gray triangles) and C. cayouetteana subsp. altasierra (light gray trinalges) and 12 quantitative variables. Figure 11. PCA scatter plot of the first two components using all specimens studied of 117 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex C. cayouetteana subsp. cayouetteana (dark gray traingles), C. cayouetteana subsp. bajasierra (medium gray triangles) and C. cayouetteana subsp. altasierra (light gray trinalges) and 12 quantitative variables. 118 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 12. PCA scatter plot of the first two components using all specimens of C. arctogena (crosses), C. cayouetteana subsp. cayouetteana (medium gray triangles) and C. cayouetteana subsp. altasierra (light gray triangles) and 12 quantitative variables. 119 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 13. PCA scatter plot of the first two components using C. arctogena (crosses) and C. cayouetteana subsp. altasierra (light gray triangles) specimens and 12 quantitative variables. 120 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 14. Scanning electron photographs of silica bodies of all putative taxa in the C. capitata complex. (A) Carex capitata, A. Dutilly & E. Lepage 16761 (CAN-17332) from Ontario; (B) C. arctogena, J. Starr 10023 & T. Villaverde (CAN) from Argentina; (C) C. cayouetteana subsp. cayouetteana, K. H. Lackschewitz 9909 (MONTU-86558) from Montana;(D) C. cayouetteana subsp. bajasierra, J. Starr & J. Thibeault 07-44 from California (CAN); (E) C. cayouetteana subsp. altasierra, C. W. Sharsmith 2681 (CAN-162869). See Table A.9 for additional specimen voucher information. 121 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure 15. The distribution of C. capitata based on all the herbarium specimens examined in this study. Inset represents the distribution in Scandinavia. 122 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Additional information 123 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table A.1: Kruskal-Wallis test. Chi-square value, degrees of freedom (df) and P-value are shown for each variable. Variable KruskalWallis CLMHT 76.238 CLMH 780.187 LEAFL 447.911 CULMW 299.697 LEAFW 69.523 INFLOW 442.021 MSPL 592.884 GLUMH 28.639 GLUMHC 451.364 INFLOL 549.027 FPPL 179.482 FSCL 28.635 FSCW 334.419 FSCWL 104.719 PERIGL 321.547 PERBKL 237.847 PERIGW 532.796 PERIWD 132.667 ACHW 31.064 ACHL 145.449 MSCL 307.368 MSCW 127.065 chi-square df 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 p- value 1,09E-12 4,58E-13 4,39E-06 4,96E-03 0.1384 5,83E-06 4,09E-09 9,26E-03 3,73E-06 3,41E-08 0.001263 9,27E-03 9,70E-04 0.03319 1,78E-03 8,82E-02 7,45E-08 0.01004 0.5402 0.005745 3,46E-03 0.01280 124 CLMHT CLMH LEAFL CULMW LEAFW INFLOW MSPL GLUMH GLUMHC INFLOL FPPL FSCL FSCW FSCWL PERIGL PERBKL PERIGW PERIWD ACHW ACHL MSCL MSCW CLMHT 1,0 0,9 0,8 0,0 0,0 0,1 0,3 0,2 0,3 0,4 0,2 0,0 0,1 0,0 0,0 0,0 0,1 0,0 0,1 0,0 0,2 0,1 CLMH 1,0 0,7 0,0 0,0 0,1 0,4 0,2 0,3 0,4 0,2 0,0 0,0 0,0 0,1 0,0 0,1 0,1 0,0 0,0 0,2 0,1 LEAFL 1,0 0,1 0,1 0,2 0,2 0,1 0,2 0,3 0,2 0,1 0,0 0,0 0,1 0,1 0,1 0,0 0,1 0,0 0,2 0,1 CULMW 1,0 0,2 0,1 0,3 0,2 0,1 0,3 0,2 0,3 0,2 0,2 0,2 0,0 0,2 0,1 0,1 0,0 0,1 0,2 LEAFW 1,0 0,1 0,1 0,1 0,0 0,1 0,1 0,1 0,1 0,0 0,2 0,0 0,1 0,1 0,1 0,1 0,1 0,1 1,0 0,1 0,2 0,9 0,2 0,2 0,3 0,2 0,1 0,1 0,1 0,2 0,0 0,0 0,3 0,4 INFLO W MSPL 1,0 0,0 0,1 0,1 0,2 0,5 0,3 0,1 0,0 0,4 0,5 0,5 0,1 0,2 0,1 0,4 0,0 GLUMH 1,0 0,6 0,1 0,2 0,0 0,2 0,0 0,1 0,0 0,2 0,1 0,1 0,1 0,1 0,1 1,0 0,5 0,3 0,3 0,2 0,1 0,1 0,2 0,2 0,0 0,0 0,4 0,4 GLUMH C INFLOL 1,0 0,2 0,1 0,1 0,1 0,1 0,1 0,0 0,2 0,0 0,1 0,0 0,2 0,0 FPPL 1,0 0,2 0,2 0,0 0,1 0,2 0,2 0,1 0,0 0,0 0,3 0,0 FSCL 1,0 0,2 0,1 0,1 0,0 0,1 0,0 0,1 0,1 0,3 FSCW 125 1,0 0,4 0,4 0,1 0,2 0,3 0,1 0,1 0,0 0,2 0,2 FSCWL 1,0 0,2 0,0 0,2 0,1 0,1 0,1 0,0 0,2 PERIGL 1,0 0,5 0,4 0,2 0,3 0,2 0,2 0,1 PERBKL 1,0 0,3 0,1 0,2 0,1 0,1 0,1 1,0 0,0 0,3 0,1 0,4 0,1 1,0 0,1 0,0 0,0 0,1 PERIG W PERIWD Table A.2: Correlation matrix for 22 continuous variables used in the morphometric study. ACHL ACHW 1,0 0,5 1,0 0,2 0,1 1,0 0,1 0,0 0,2 1 MSCL ________________________________________________________________ Chapter 2. Taxonomy ________________________________________________________________ of the Carex capitata complex MSCW ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table A.4: Summary statistics for the morphometric analysis of C. arctogena. Abbreviations: n = sample size; sd = standard deviation; mad = median absolute deviation; se= standard error. Variable n CLMHT mean sd median trimmed mad min max range skew kurtosis se 35 204.03 52.16 190.5 200.03 45.29 125.9 335.05 209.15 0.68 -0.29 8.82 CLMH 35 168.89 44.74 169.0 165.20 38.62 100.7 280.05 179.35 0.64 -0.09 7.56 LEAFL 35 154.64 47.90 145.5 150.61 52.34 90.5 298.70 208.20 0.87 0.32 8.10 CULMW 35 0.78 0.15 0.8 0.78 0.15 0.5 1.10 0.60 0.03 -0.97 0.03 LEAFW 35 0.62 0.12 0.6 0.61 0.15 0.4 1.00 0.60 0.65 0.98 0.02 INFLOW 35 3.83 0.39 3.8 3.83 0.44 2.9 4.70 1.80 -0.02 -0.46 0.07 MSPL 35 2.12 0.68 2.0 2.09 0.74 1.2 3.70 2.50 0.46 -0.95 0.12 GLUMH 35 0.97 0.49 0.9 0.88 0.30 0.4 2.60 2.20 1.70 2.56 0.08 GLUMHC 35 0.40 0.17 0.4 0.40 0.15 0.1 1.00 0.90 0.98 2.64 0.03 INFLOL 35 7.34 1.16 7.4 7.30 1.19 5.2 9.80 4.60 0.41 -0.64 0.20 FPPL 35 4.46 0.64 4.5 4.43 0.74 3.5 6.00 2.50 0.34 -0.51 0.11 FSCL 35 2.18 0.29 2.1 2.17 0.15 1.4 3.00 1.60 0.43 1.15 0.05 FSCW 35 1.77 0.34 1.8 1.77 0.30 1.0 2.60 1.60 0.11 0.04 0.06 FSCWL 35 0.68 0.29 0.6 0.66 0.15 0.1 1.70 1.60 1.22 2.79 0.05 PERIGL 35 2.65 0.45 2.7 2.72 0.44 1.5 3.20 1.70 -1.19 0.81 0.08 PERBKL 35 1.13 0.23 1.2 1.12 0.30 0.7 1.80 1.10 0.50 0.80 0.04 PERIGW 35 1.50 0.19 1.5 1.50 0.15 1.0 2.00 1.00 -0.03 0.58 0.03 PERIWD 35 0.82 0.19 0.8 0.82 0.15 0.5 1.30 0.80 0.26 -0.41 0.03 ACHW 35 1.18 0.18 1.2 1.18 0.15 0.7 1.70 1.00 0.07 1.34 0.03 ACHL 35 1.61 0.15 1.6 1.60 0.15 1.4 1.90 0.50 0.61 -0.55 0.03 MSCL 35 1.86 0.35 1.8 1.86 0.30 1.0 2.80 1.80 0.17 0.41 0.06 MSCW 35 1.12 0.21 1.1 1.11 0.15 0.7 1.60 0.90 0.40 -0.36 0.04 126 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table A.5: Summary statistics for the morphometric analysis of C. capitata. Abbreviations: n = sample size; sd = standard deviation; mad = median absolute deviation; se= standard error. Variable n CLMHT CLMH mean sd median trimmed mad min max range skew kurtosis se 38 296.45 70.50 290.05 293.55 70.42 150.05 490.05 340.00 0.49 0.12 11.44 38 272.10 82.37 270.70 268.12 66.72 120.05 490.05 370.00 0.53 -0.14 13.36 LEAFL 38 205.92 50.00 210.38 203.87 43.70 115.05 360.05 245.00 0.64 0.70 8.11 CULMW 38 0.75 0.09 0.70 0.74 0.15 0.60 1.00 0.40 0.45 0.46 0.01 LEAFW 38 0.59 0.19 0.60 0.57 0.15 0.40 1.50 1.10 2.78 10.06 0.03 INFLOW 38 4.41 0.48 4.45 4.43 0.52 3.30 5.40 2.10 -0.14 -0.50 0.08 MSPL 38 1.95 0.65 1.85 1.93 0.74 0.80 3.50 2.70 0.25 -0.77 0.11 GLUMH 38 0.56 0.62 0.50 0.46 0.59 0.01 2.25 2.24 1.39 1.24 0.10 GLUMHC 38 0.19 0.15 0.15 0.18 0.21 0.01 0.50 0.49 0.21 -1.44 0.02 INFLOL 38 7.52 1.20 7.40 7.51 1.33 5.50 10.30 4.80 0.16 -0.90 0.19 FPPL 38 4.78 0.89 4.60 4.71 0.67 2.70 7.20 4.50 0.74 0.92 0.14 FSCL 38 2.12 0.25 2.20 2.14 0.22 1.50 2.50 1.00 -0.72 0.03 0.04 FSCW 38 1.43 0.21 1.40 1.43 0.15 0.80 1.80 1.00 -0.49 0.60 0.03 FSCWL 38 0.61 0.16 0.60 0.60 0.15 0.30 1.00 0.70 0.16 -0.28 0.03 PERIGL 38 2.99 0.45 3.10 3.04 0.30 1.80 3.60 1.80 -1.09 0.69 0.07 PERBKL 38 1.28 0.24 1.30 1.29 0.30 0.80 1.70 0.90 -0.39 -0.74 0.04 PERIGW 38 1.79 0.21 1.80 1.79 0.30 1.30 2.20 0.90 -0.30 -0.52 0.03 PERIWD 38 0.94 0.20 1.00 0.94 0.22 0.50 1.30 0.80 -0.26 -0.86 0.03 ACHW 38 1.21 0.13 1.20 1.21 0.15 1.00 1.50 0.50 0.08 -0.69 0.02 ACHL 38 1.72 0.21 1.70 1.73 0.15 1.10 2.10 1.00 -0.86 0.82 0.03 MSCL 38 2.19 0.26 2.20 2.19 0.15 1.60 2.90 1.30 0.17 0.46 0.04 MSCW 38 1.02 0.23 1.00 1.02 0.30 0.60 1.50 0.90 0.16 -0.81 0.04 127 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table A.6: Summary statistics for the morphometric analysis of Carex cayouetteana subsp. cayouetteana. Abbreviations: n = sample size; sd = standard deviation; mad = median absolute deviation; se= standard error. Variable n CLMHT mean sd median trimmed mad min max range skew kurtosis se 28 204.90 30.44 205.23 205.15 22.24 142.72 260.50 117.78 -0.09 -0.25 5.75 CLMH 28 178.29 39.83 182.12 177.94 51.32 116.00 260.05 144.05 -0.04 -1.16 7.53 LEAFL 28 157.49 21.11 160.05 157.93 25.39 115.05 195.70 80.65 -0.15 -1.00 3.99 CULMW 28 0.89 0.12 0.90 0.89 0.15 0.60 1.10 0.50 -0.33 -0.34 0.02 LEAFW 28 0.64 0.13 0.60 0.63 0.15 0.40 0.90 0.50 0.29 -0.62 0.02 INFLOW 28 4.44 0.61 4.35 4.39 0.52 3.50 6.10 2.60 1.07 0.61 0.11 MSPL 28 3.22 1.40 3.25 3.13 1.11 0.90 6.65 5.75 0.50 0.05 0.27 GLUMH 28 0.53 0.36 0.50 0.53 0.52 0.00 1.00 1.00 -0.08 -1.43 0.07 GLUMHC 28 0.23 0.16 0.25 0.23 0.22 0.00 0.50 0.50 0.07 -1.27 0.03 INFLOL 28 9.11 1.63 9.40 9.09 1.56 6.10 12.80 6.70 0.04 -0.63 0.31 FPPL 28 5.00 0.80 5.00 4.97 0.96 3.90 6.40 2.50 0.23 -1.34 0.15 FSCL 28 2.43 0.24 2.45 2.42 0.22 1.90 3.00 1.10 0.09 0.27 0.05 FSCW 28 1.73 0.27 1.65 1.72 0.22 1.10 2.42 1.32 0.27 0.09 0.05 FSCWL 28 0.77 0.25 0.77 0.78 0.22 0.10 1.30 1.20 -0.17 0.38 0.05 PERIGL 28 2.80 0.38 2.90 2.84 0.30 1.50 3.40 1.90 -1.45 2.98 0.07 PERBKL 28 1.23 0.22 1.20 1.20 0.15 0.90 1.90 1.00 1.44 1.95 0.04 PERIGW 28 1.96 0.31 1.90 1.99 0.30 1.20 2.50 1.30 -0.59 0.34 0.06 PERIWD 28 0.81 0.29 0.75 0.80 0.37 0.30 1.80 1.50 1.13 2.59 0.05 ACHW 28 1.23 0.22 1.20 1.22 0.15 0.60 1.80 1.20 0.16 2.34 0.04 ACHL 28 1.59 0.24 1.60 1.59 0.15 1.00 2.30 1.30 0.32 1.38 0.05 MSCL 28 2.28 0.30 2.20 2.26 0.30 1.80 3.00 1.20 0.47 -0.31 0.06 MSCW 28 1.16 0.27 1.13 1.16 0.19 0.60 1.90 1.30 0.28 0.75 0.05 128 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table A.7: Summary statistics for the morphometric analysis of C. cayouetteana subsp. bajasierra. Abbreviations: n = sample size; sd = standard deviation; mad = median absolute deviation; se= standard error. Variable n mean sd median trimmed mad CLMHT 28 204.90 30.44 205.23 205.15 22.24 142.72 260.50 117.78 -0.09 -0.25 5.75 CLMH 28 178.29 39.83 182.12 177.94 51.32 116.00 260.05 144.05 -0.04 -1.16 7.53 LEAFL 28 157.49 21.11 160.05 157.93 25.39 115.05 195.70 80.65 -0.15 -1.00 3.99 CULMW 28 0.89 0.12 0.90 0.89 0.15 0.60 1.10 0.50 -0.33 -0.34 0.02 LEAFW 28 0.64 0.13 0.60 0.63 0.15 0.40 0.90 0.50 0.29 -0.62 0.02 INFLOW 28 4.44 0.61 4.35 4.39 0.52 3.50 6.10 2.60 1.07 0.61 0.11 MSPL 28 3.22 1.40 3.25 3.13 1.11 0.90 6.65 5.75 0.50 0.05 0.27 GLUMH 28 0.53 0.36 0.50 0.53 0.52 0.00 1.00 1.00 -0.08 -1.43 0.07 GLUMHC 28 0.23 0.16 0.25 0.23 0.22 0.00 0.50 0.50 0.07 -1.27 0.03 INFLOL 28 9.11 1.63 9.40 9.09 1.56 6.10 12.80 6.70 0.04 -0.63 0.31 FPPL 28 5.00 0.80 5.00 4.97 0.96 3.90 6.40 2.50 0.23 -1.34 0.15 FSCL 28 2.43 0.24 2.45 2.42 0.22 1.90 3.00 1.10 0.09 0.27 0.05 FSCW 28 1.73 0.27 1.65 1.72 0.22 1.10 2.42 1.32 0.27 0.09 0.05 FSCWL 28 0.77 0.25 0.77 0.78 0.22 0.10 1.30 1.20 -0.17 0.38 0.05 PERIGL 28 2.80 0.38 2.90 2.84 0.30 1.50 3.40 1.90 -1.45 2.98 0.07 PERBKL 28 1.23 0.22 1.20 1.20 0.15 0.90 1.90 1.00 1.44 1.95 0.04 PERIGW 28 1.96 0.31 1.90 1.99 0.30 1.20 2.50 1.30 -0.59 0.34 0.06 PERIWD 28 0.81 0.29 0.75 0.80 0.37 0.30 1.80 1.50 1.13 2.59 0.05 ACHW 28 1.23 0.22 1.20 1.22 0.15 0.60 1.80 1.20 0.16 2.34 0.04 ACHL 28 1.59 0.24 1.60 1.59 0.15 1.00 2.30 1.30 0.32 1.38 0.05 MSCL 28 2.28 0.30 2.20 2.26 0.30 1.80 3.00 1.20 0.47 -0.31 0.06 MSCW 28 1.16 0.27 1.13 1.16 0.19 0.60 1.90 1.30 0.28 0.75 0.05 129 min max range skew kurtosis se ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Table A.8: Summary statistics for the morphometric analysis of C. cayouetteana subsp. altasierra. Abbreviations: n = sample size; sd = standard deviation; mad = median absolute deviation; se= standard error. Variable n mean sd median trimmed mad min max range skew kurtosis se CLMHT 6 158.03 24.75 147.53 158.03 9.25 CLMH 6 110.78 22.56 112.53 110.78 26.39 83.97 140.05 56.08 0.03 LEAFL 6 113.08 19.27 114.03 113.08 CULMW 6 0.83 0.12 0.85 LEAFW 6 0.58 0.17 INFLOW 6 3.07 0.69 MSPL 6 3.05 GLUMH -0.74 10.10 -2.01 9.21 18.35 85.00 140.05 55.05 -0.07 -1.55 7.87 0.83 0.15 0.70 1.00 0.30 0.04 -1.88 0.05 0.55 0.58 0.07 0.40 0.90 0.50 0.80 -0.86 0.07 2.70 3.07 0.22 2.50 4.00 1.50 0.51 -1.94 0.28 1.03 2.85 3.05 0.82 2.20 4.90 2.70 0.77 -1.06 0.42 6 1.35 0.74 1.45 1.35 0.59 0.01 2.00 1.99 -0.77 -0.99 0.30 GLUMHC 6 0.27 0.18 0.30 0.27 0.22 0.01 0.50 0.49 -0.20 -1.76 0.07 INFLOL 6 7.65 0.87 8.00 7.65 0.52 6.20 8.50 2.30 -0.62 -1.48 0.36 FPPL 6 3.70 0.84 4.00 3.70 0.00 2.00 4.20 2.20 -1.33 -0.13 0.34 FSCL 6 1.93 0.12 1.95 1.93 0.15 1.80 2.10 0.30 0.04 -1.88 0.05 FSCW 6 1.53 0.35 1.46 1.53 0.43 1.15 2.00 0.85 0.23 -1.94 0.14 FSCWL 6 0.60 0.13 0.60 0.60 0.00 0.40 0.80 0.40 0.00 -0.92 0.05 PERIGL 6 2.55 0.64 2.40 2.55 0.22 2.00 3.80 1.80 1.09 -0.48 0.26 PERBKL 6 0.97 0.35 0.95 0.97 0.22 0.60 1.60 1.00 0.72 -0.96 0.14 PERIGW 6 1.50 0.26 1.50 1.50 0.15 1.10 1.90 0.80 0.00 -1.15 0.11 PERIWD 6 0.75 0.14 0.80 0.75 0.07 0.50 0.90 0.40 -0.76 -0.95 0.06 ACHW 6 1.23 0.35 1.10 1.23 0.15 1.00 1.90 0.90 1.05 -0.63 0.14 ACHL 6 1.82 0.43 1.75 1.82 0.30 1.40 2.60 1.20 0.81 -0.89 0.17 MSCL 6 2.20 0.20 2.20 2.20 0.15 1.90 2.50 0.60 0.00 -1.29 0.08 MSCW 6 1.04 0.10 1.04 1.04 0.07 0.90 1.20 0.30 0.10 -1.45 0.04 130 140.50 205.05 64.55 1.01 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Studied specimens of C. arctogena Argentina, Chubut, Los Alerces National Park, Soriano, A., 30.3.1952, (BAA). Dept. Chos Malal, 2300 m, Boelcke, O., Correa, M.N.; Bacigalupo, N.M., 30.1.1964, (BAA, 11368). Mendoza, Cordillera del Rio Barrancas, Kurtz, F., 16.11.1888, (MICH). Canada, Alberta, Mercoal, Rousseau, J., 18.7.1947, (COLO, 13811). Alberta, Mercoal, 4300 ft, Malte, M.O., Watson, W.R., 8.8.1925, (RM, 280606). British Columbia, Pine Pass, 1402 m, Argus, G.W., 12.7.1973, (CAN, 372267). British Columbia, 7228 ft, Calder, J., 149035, Parmelee, J.A.; Taylor, R.L., 8.8.1956, (COLO, 149035). British Columbia, Mount Apex, 7100 ft, Calder, J., Savile, O., 11.8.1953, (RM, 252249). Manitoba, Fort Chimo, Rousseau, J., 14.8.1951, (WIN, 22355). Manitoba, Baralzon Lake, Scoggan, H.J., 22434, Baldwin, W.K.W., 28.7.1950, (WIN, 22434). Manitoba, Hudsons Bay Co., Duck Lake, Scoggan, H.J., Baldwin, W.K.W., 10.8.1950, (WIN, 22435). Manitoba, Fort Chimo, Legault, A., 22.7.1963, (COLO, 491481). Manitoba, Hudsons Bay Co., Duck Lake, Scoggan, H.J., Baldwin, W.K.W., 10.8.1950, (CAN, 201506). Manitoba, Baralzon Lake, Scoggan, H.J., Baldwin, W.K.W., 30.7.1950, (CAN, 202500). Manitoba, Nueltin Lake, Baldwin, W.K.W., 26.7.1951, (CAN, 212816). Manitoba, Cochrane River, Baldwin, W.K.W., 3.7.1951, (CAN, 212817). Manitoba, Cochrane River, Baldwin, W.K.W., 3.7.1951, (CAN, 212817). Manitoba, Baralzon Lake, Scoggan, H.J.,Baldwin, W.K.W., 28.7.1950, (CAN, 201507). Newfoundland-Labrador, Esker area, Mäkinen, Y., Kankainen, E. 21.7.1967, (CAN, 314758). Newfoundland-Labrador, Esker area, 838 m, Mäkinen, Y.Kankainen, E.21.7.1967, (CAN, 314758). Newfoundland-Labrador, Twin Falls, Hustich, I., 6.7.1967, (CAN, 313311). Nunavut, Upper Hood River, Gould, W., 7.1995, (COLO, 475773). Ontario, Kenora District, Patricia PortionRiley, J.L., 12.8.1980, (CAN). Ontario, Hudson Bay Lowlands, Porsild, A.E., Baldwin, W.K.W.4.7.1957, (CAN, 278707). Quebec, Fort Chimo, Sørensen, T.H., 17.8.1959, (C). Quebec, Baie dUngava, Blondeau, M., 1.8.1993, (WIN, 53902). Quebec, Baie dUngava, Rousseau, J., 23.7.1951, (WIN, 22356). Quebec,Lac Jaucourt Region Lichteneger Lake,487 m Argus, G.W., 16.7.1974, (CAN, 3779977). Quebec, Boatswain Bay, Baldwin, W.K.W., 17333, Hustich, I.; Kucyniak, J.; Tuomikoski, R., 8.7.1947, (CAN, 17333). Quebec, Lac Payne, Legault, A., 23398, 2.8.1965, (CCO, 23398). Quebec, Northern QuebecLake Payne, Legault, A.,Brisson, S. 2.8.1965, (COLO, 210789). Quebec, Ungava, Husons Bay, Dutilly, A., Lepage, E., 21.3.1945, (RM, 233644). Quebec, Fort Chimo, Calder, J., 31.7.1948, (RM, 255325). Quebec,Hudson Bay Cairn Island, Abbe, E.C.,Abbe, L.B.; Marr, J. 30.7.1939, (RM, 252521). Quebec, Hudson Bay,Great Whale River Calder, J.Savile, O.; Kukkonen, I., 8.8.1959, (RM, 260486). Quebec, Lac Kopeteokash, Rousseau, J., 18.7.1947, (RM, 228636). Saskatchewan, Vicinity of Patterson Lake, Argus, G.W., 20.7.1963, (CAN, 282691). Saskatchewan, Vicinity of Patterson Lake, Argus, G.W., 20.7.1963, (CAN, 282691).Saskatchewan, Northeastern SaskatchewanPatterson Lake , Argus, G.W., 20.7.1963, (RM, 277437). Enontekiö, KilpisjärviSaana, 750 m Roivainen, L., 8.7.1935, (H, 127310). Enontekiö, KilpisjärviSaana, 750 mVäre, H., 29.7.2004, (H, 805587). Enontekiö Lapland, 825 m, Väre, H., 17.7.2006, (H, 809948). Inari, Vätsäri Wilderness Area, Kulmala, H., 27.7.1996, (H, 717201). Lapponia Imandrae, Lindén, J., 18.7.1891, (H, 325665). Lapponia Imandrae, Axelson, W.M., Borg, V., 24.7.1901, (H, 325667).Finland, Lapponia murmanica, 550 m, Brotherus, V.F., 8.1887, (H, 325639). PetsamoCajander, A., 10.7.1927, (H, 325644). Porojärvet, Toskalhar950 m,Roivainen, H.Ollila, L. 15.7.1955, (H, 127313). Porojärvet, Toskalhar, 910 m, Roivainen, H., 15.7.1966, (H, 179889). Foutell, C.W., Jalan, M.J., 10.8.1899, (H, 325657). Altevatn, 500 m, 17.8.1967, (M, 0151943). Groenlandia meridionalis, Kangerdluarssuk, Hansen, C. 282521,Hansen, K.; Petersen, M. 4.7.1962, (CAN).Nigerdleq, Jørgensen, L.B. 15.7.1966, (CAN, 311369). Greenland, Vestgrønland, Pingorssuaq Kitdleq, 400 mHanfgarn, S., 11.8.1983, (C). Tugtilik Lake, 10 m, Elsley, J.E. 15.8.1967, (M, 0151948). Lagerkranz, J., 2.8.1936, (RMS, 153944). Finnmark,Sör-Varanger Bugöynes, Toivonen, H., 30.7.1971, (H, 1081734). Finnmark, Sör-Varanger, Bugöynes, Toivonen, H., 1081733, 30.7.1971, (H, 1081733). Nordland, Narvik hd., Skjomen, Skifte, O., GRaff, G.; Spjelkavik, S., 11.8.1973 (H). Norland, Sulitjelma, Skifte, O. 1.8.1962, (DAO, 285800). Sverige, Abisko, Paddas, Lid, J., 2.8.1950, (H, 1300264). Norway, Troms, Bardu, Leinavatn, 498 mEngelskjøn, T.,Engelskjøn, E.M. 7.7.1977, (C). Troms, Bardu, Altevatn580 m, 18.8.1967, (M, 0151942). Troms, Bardu,Kampaksla 780 m, Engelskjøn, T.,Skifte, O. 9.8.1978, (H, 1685049). Petsamo, Petchenga Vouvatusjärvi, Piirainen, M., 27.7.1995, (H, 1682990). Sweden, Torne 131 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Lappmark, Karesuando, 1000 m, Smith, H., 26.7.1933, (DAO, 257429). Torne Lappmark, Karesuando, 1000 m, Smith, H., 26.7.1993, (H, 1652844). Torne Lappmark, Jukkasjärvi parish, 550 m, Alm, G., Smith, H. 23.7.1939, (H, 1300259). New Hampshire, Coos Co., Mt. Washington, Hodgon, A.R., Gale, M., 30.6.1950, (DAO, 257427). New Hampshire, White Mountains, Mt. Washington, Forbes, F., 9.8.1902, (RMS, 242089). New Hampshire, Alpine Garden, Mt. Washington, Sargent, F.H., 5.7.1942, (BRY, 143916). New Hampshire, Alpine Garden, Mt. Washington,5000 ft Löve, A.,Löve, D. 27.7.1958, (COLO, 288736). New Hampshire, Alpine Garden, Mt. Washington, Löve, A. ,Löve, D. 3.7.1960, (COLO, 295019). New Hampshire, White MountainsMt. Washington, Forbes, F., 9.8.1902, (RM, 50212). Studied specimens of C. capitata Austria, Innsbruck, Seefeld, 1180 m, HöllerJ. s.n., 26.7.1958, (M, 0151923). Tirol, Seiser Alp, 2000 m, Görz s.n., 27.7.1914, (GH). Canada, Alberta, Ft. Fitzgerald, Cody, W.J. 4533 and Loan, C.C., 19.7.1950, (RM, 228683). British Columbia, Bluster Mt., 2133 m, Thompson, J. s.n. and Thompson, M., 14.7.1938, (WTU, 17326). British Columbia, Mt. Tinsdale, 2133 m, Krajina, J. s.n. and Pojar, J., 13.8.1974, (UBC, 149191). British Columbia, Mount Apex, 2164 m, Calder, J. 11795 and Savile, O., 11.8.1953, (WTU, 170234). British Columbia, Anahim Lake, 1219 m, Calder, J. 18578, Parmelee, J.A.; Taylor, R.L., 9.7.1956, (WTU, 197744). British Columbia, Anahim Lake, 1219 m, Calder, J. s.n., Parmelee, J.A.; Taylor, R.L., 9.7.1956, (COLO, 158463). British Columbia, Summit Pass, Raup, H.M. 10788 and Correll, D.S., 24.7.1948, (RM, 272042). Manitoba, Fort Churchill, Ritchie, J. 2104, 5.8.1956, (WIN, 22433). Manitoba, Wapusk National Park, 10 m, Punter, E. 03-509 and Piercey-Normore, M., 19.7.2003, (WIN, 71429). Manitoba, Twin Lakes, Ford, A. 02379, Piercey-Normore, M.; Punter, E.; Punter, D., 25.7.2002, (WIN, 71024). Manitoba, Fort Churchill, Johnson, K. J73-402, 26.8.1973, (WIN, 33557). Manitoba, Fort Churchill, Shay, J. 59-924a, 9.7.1959, (WIN, 64354). Manitoba, Fort Churchill, Shay, J. 83-60, 11.7.1983, (WIN, 40808). Manitoba, Fort Churchill, Zbigniewicz, M. 83-237, 5.8.1983, (WIN, 40839). Manitoba, Wapusk National Park, 15 m, Ford, A. 02-330, Piercey-Normore, M.; Punter, D.; Punter, E., 21.7.2002, (WIN, 70209). Manitoba, Wapusk National Park, 23 m, Ford, A. 02-306, Piercey-Normore, M.; Punter, D.; Punter, E., 20.7.2002, (WIN, 70255). Manitoba, Vicinity of Churchill, Schofield, W. 6862 and Crum, H., 21.7.1956, (CAN, 247332). Manitoba, Fort Churchill, Ritchie, J. 2104, 5.8.1956, (CAN, 248387). Manitoba, Open coastal plain 3 miles East of camp, McFarlane, D.M. 239 and Irvine, B.R., 7.8.1953, (CAN, 322733). Manitoba, Fort Churchill, Brown, D.K. 733, 12.7.1951, (CAN, 263696). Manitoba, Fort Churchill, Argus, G.W. 425-58, 4.8.1958, (CAN, 281144). Manitoba, Fort Churchill, Rossbach, G.B. 7073, 5.8.1965, (CAN, 329753). Manitoba, Fort Churchill, s.n., 30.7.1910, (CAN, 17340). Northwest Territories, Aubry Lake, Riewe, R. 225 and Marsh, J., 17.7.1976, (WIN, 32000). Northwest Territories, Aubry Lake, Riewe, R. 336 and Marsh, J., 4.8.1976, (WIN, 31438). Northwest Territories, Aubry Lake, Riewe, R. 225 and Marsh, G. .M., 17.7.1976, (CAN, 433230). Northwest Territories, Kakisa river, Thieret, J.W. MM3 and Reich, R.J., 18.6.1959, (CAN, 298045). Northwest Territories, Sawmill Bay, Shacklette, H.T. 2970, 13.7.1948, (CAN, 199991). Ontario, Fort Severn, Hustich, I. 1296, 13.7.1956, (CAN, 242845). Ontario, Winisk, Lundsden, H. s.n., (COLO, 448829). Ontario, Kenora District, Riley, J.L. 5848, 23.8.1976, (CAN, 409561). Ontario, Lake River, Dutilly, A. 16550-16807 and Lepage, E., 12.9.1946, (CAN, 17332). Quebec, Fort Chimo, Calder, J. 2316, 2.8.1948, (RM, 216050). Saskatchewan, Hwy #2 Waskesim, Hudson, J. 5063, 31.7.1992, (CAN, 565528). Yukon, Mile 85 on road from Whitehorse to Dawson, 579 m, Calder, J. 25796 and Gillett, J., 22.6.1960, (ALA, 1124987). Yukon, Kluane Lake Quad, 1036 m, Scotter, W. 20992 (Y-18), 2.8.1972, (ALA, 1124986). Yukon, Francis Lake, Duman, G. 70805, 28.7.1970, (ALA, 1124985). Yukon, Ogilvie Mountains, Porsild, A.E. 1462, Porsild, R., 28.6.1968, (CAN, 318349). Yukon, Alaska Highway at milepost 1149, Welsh, S.L. 7921, Moore, G., 5.7.1968, (BRY, 71334). Yukon, Rink Rapids, Macoun, 7922, 9.7.1902, (CAN, 17356). Yukon Territory, Dempster Highway, Porsild, R. 1593, 17.7.1968, (CAN, 318505).Finland, Enontekiö Lapland, Lake Raittijärvi, 545 m, Väre, H. 11643, 8.8.2001, (H, 737942). Enontekiön Lappi, Enontekiö, 520 m, Piirainen, M. 2118 and Piirainen, P., 19.7.1991, (H, 668357). 132 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Enontekiön Lappi, Enontekiö, 600 m, Väre, H. 14955, 1.8.2003, (H, 746021). Enontekiön Lappi, Goaskinjörvi, Kulmala, H. 83/02, 8.8.2001, (H, 744865). Inari Lapland, Kevo Research Station, Sulkinoja, M. s.n., 12.9.1967, (M, 0151936). Inarin Lappi, Kietsimäjoki, Kulmala, H. 8/97, 27.7.1997, (H, 720181). Kainuu, YliNäljänkä, 230 m, Ohenoja, M. 11, 8.8.1990, (H, 696101). Karesuando, Karesuando, Honkell, J.s.n., 9.8.1923, (M, 0151934). Kemi Lapland, Vesmajärvi, 210 m, Kurtto, A. 1778, Vuokko, S., 10.8.1978, (O, 660352). Kittilä, Mustavaara, 202 m, Ulvinen, T. s.n., Vilpa, E.; Seitapuro, H., 10.7.1997, (H, 720622). Kuusamo, Liikasenvaara, Ulvinen, T. s.n., 9.8.1962, (O, 539355)., Kuusamo, Liikasenvaara, Ulvinen, T. s.n., 9.8.1962, (M, 0151946). Kuusamo, Lake Paanajärvi, Laurila, M. s.n., 9.7.1938, (H, 272411). Kuusamo, Liikasenvaara, Kukkonen, I. s.n., 30.8.1966, (RMS, 284390). Kuusamo, Liikasenvaara, Ulvinen, T. s.n., 9.8.1962, (CAN, 276804). Kuusamo, NEsection, Paanajärv, Savola, J. s.n., 28.7.1985, (H, 616973). Länsi-Suomen Lääni, Frösön, Mickström s.n., Lagerheim, C.; Sjögren, G., 8.1844, (GH). Lapland, Upper Kemi-river, Ulvinen, T. s.n., 12.8.1961, (C). Lapland, Poroeno, 540 m, Väre, H. 11651, 9.8.2001, (H, 737950). Lapland, Kivijärvi, 460 m, Väre, H. 11515, 29.7.2001, (H, 737814). Lapland, Upper Kemi-river, Ulvinen, T. s.n., 12.8.1961, (H, 328698). Lapland, Tulppio district, Vuokko, S. 8, 29.7.1975, (H, 449415). Lapponia, Muornis, Montell, I. s.n., 17.7.14, (GH). Lapponia, Euvntekiensis, Montell, I. s.n., 9.8.1923, (M, 0151944). Lapponia, Shishe, Montell, I. s.n., 11.7.1909, (M, 0151913). Lapponia, Kouda, Brotherus, V.F. s.n. and Brotherus, A.H., .8.1872, (H, 244602). Lapponia orientalis, Tjavauga, Brenner, M. s.n., 4.7.1863, (H, 1037144). Lapponia Varsugæ, Kihlman, A.O. s.n., 19.8.1889, (H, 328709). Petsamo, Primmanki, Saxén, U. s.n., 13.7.1930, (H, 328729). Pohjanmaa, Ylitornio, Mellakoski, 137 m, Ulvinen, T. s.n., 24.7.1980, (COLO, 394339). Pohjois-Pohjanmaa, Pessalompolo, 140 m, Ulvinen, T. s.n., Karjalahti, T., 30.7.1976, (H, 457472). Sompion Lappi, Petkula, Ohenoja, E. s.n., Melamies, H., 26.7.1996, (H, 722418). Tulijoki, Kainuu, Lehtonen, L. s.n., 18.7.1933, (DAO, 257434). Tulijoki, Kainuu, Lehtonen, L. s.n., 18.7.1933, (DAO, 257433). Tuntsa, Ylitornio, Mellakoski, Kämäräinen, H. 1999215, 16.7.1999, (H, 732554). Vaskojoki, Kihlman, A.O. s.n., .8.87, (GH). Germany, Bavaria, Monacho Bavaria, Brügger, C. s.n., 29.6.1873, (GH, 2275). Bavaria, Mikalum, Buccarini s.n., (GH). Bavaria, Oberbayern, Seurs 2053, 27.5.1949, (M, 0151919). Bavaria, Oberbayern, Seurs s.n., 22.5.1851, (M, 0151916). Bavaria, Oberbayern, Leuvs s.n., Seuvnad, 9.6.1851, (M, 0151915). Bavaria, Deining, Brügger, C. 2275, 29.6.1873, (H, 1093339). Oberbayern, Haspelmoor, Holler s.n., 6.1872, (M, 0151918). Oberbayern, Deininger Fliz, Ohmüller s.n., 5.1867, (M, 0151920). Spitzel, V. 379, 1960, (O, 135). Oberschwaben, Schánzle 5.1880, 5.1880, (M, 0151921). Fleischer 18-1900, 1900, (H, 1226126). Greenland, Vestgrønland, Sydostbugten, 80 m, Møller, M. 1156, 15.7.1981, (C).Vestgrønland, Akuliarusikavsak, Jakobsen, K. 12291, 11.8.1956, (C). Iceland, Akureyrense, Skjóldalsárgil, Hg, H. 1529, 20.6.1965, (H, 1226120). Akureyri, Løgumshlid, Grøntved, J. s.n., 24.7.1928, (GH). Árnessýsla, Votamýri, 60 m, Löve, A. A095, Löve, D., 25.9.1949, (GH, 095). Belgsá, Fnjóskadal, Kristinnsson, H. 5143, 27.7.1973, (DAO, 288690). Borgarnes, Borgarnes Fjöfdur, Scamman, E. 1260, 22.8.1938, (GH, 1260). Dalfjall, Mývatnssvei, 460 m, Einarsson, E. E6042, 21.8.1974, (ICEL, 04073). Egilsstaðir, Héraði, 80 m, Meyer, Dr. med. G 7146, 27.8.1932, (ICEL, 04083). Egilsstaðir, Vopnafirði, Stefánsson I, S. 256, 4.8.1895, (ICEL, 04088). Finnsstaðir, Eiðaþinghá, Lagarfljótsrannsóknir 7145, 24.7.1975, (ICEL, 04082). Hallormsstadur, Egilsstadir, Gøtzsche, H.F. 81.37, 22.7.1981, (C, 8). Hrísey, Eyjafirði, Garðarsson, A. s.n., 12.8.1967, (ICEL, 04078). Hrísey, Eyjafirði, Garðarsson, A. s.n., 8.8.1967, (ICEL, 04077). Hvalfjörður, Ingimarsson, Ó. s.n., 11.8.1951, (DAO, 257458). Lagarfoss, Hróarstungu, Lagarfljótsrannsóknir s.n., 26.6.1976, (ICEL, 04080). Lagarfoss, Fljótsdals, Magnússon, S.H. s.n., 26.6.1976, (ICEL, 47380). Lagarfoss, Hróarstungu, Lagarfljótsrannsóknir s.n., 26.6.1976, (ICEL, 04081). Moldhaugar, Kræklingahlíð, Óskarsson, I. 935, 22.8.1926, (ICEL, 04052). Nes, Höfðahverfi, Óskarsson, I. 681, 30.6.1926, (ICEL, 46472). Öræfi, Bæjarstaðarskógur Öræfum, Björnsson, H. 9633, 16.10.1947, (ICEL, 04074). Öræfi, Fagurhólsmýri Öræfum, Björnsson, H. 9638, 7.1947, (ICEL, 04075). Öræfi, Skaftafell Öræfum, Björnsson, H. 9624, 15.6.1946, (ICEL, 04076). Reykjahlið, Lake Mývatn, 280 m, Seberg, O. 427, 14.8.1976, (C, 7). Sellátur, Reyðarfirði, Óskarsson, I. s.n., 14.7.1927, (ICEL, 04051). Skagafjord, Valnsfjall, Sørensen, T.H. 31/7, 31.7.1930, (O, 539367). Vaglaskógur, Fnjóskadal, Óskarsson, I. 1295, 7.8.1927, (ICEL, 04055). Vesturdalur, Bachufer, Lang, W. s.n., 29.7.1987, (M, 0151937). s.n., 9.7.87, (GH, ). 285 m, Lid, J. s.n., 14.7.1937, (O, 539360). Italy, South Tirol, Seiser Alm, 1860 m, Bestand, G. s.n., 17.7.1958, (M, 0151928). South 133 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Tirol, 1100 m, Hoock, G. s.n., 3.8.1908, (M, 0151922). South Tirol, Seisseralpe, , Koch, J. s.n., 7.7.1955, (M, 0151914). South Tirol, Seiser Alm, 1900 m, Hertel, H. 4324, 27.6.1964, (M, 0151927). South Tirol, Dolomiten, 2370 m, s.n., 15.7.1958, (M, 0151924). South Tirol, Seisseralpe, 1980 m, Roessler, H. 2519, 25.7.1959, (M, 0151925). South Tirol, Seiser Alm, 2000 m, Dietrich, W. 3283, 28.6.1964, (M, 0151930). South Tirol, Bozen, 1950 m, Dietrich, W. 1963-66, 28.6.1964, (M, 0151929). Südtirol, Feuchstelle, 2200 m, Angerer,O. s.n., 23.7.1976, (M, 0151926). Norway, Finnmark, Veinesbukt, Skifte, O. s.n., Stellander, O., 6.8.1967, (C). Finnmark, Kautokeino, 340 m, Kautokeino, N. s.n., Mieron, N.; Moor, 23.8.1967, (M, 0151938). Finnmark, Bugöynes, 20 m, Toivonen, H. s.n., 3.8.1977, (H, 1471327). Finnmark, Bugöynes, 20 m, Toivonen, H. s.n., 3.7.1977, (H, 1471326). Finnmark, Bugöynes, 25 m, Toivonen, H. s.n., 3.8.1977, (H, 1468929). Finnmark, Billefjord, 5 m, Toivonen, H. s.n., 1.8.1972, (H, 1470511). Hamar, Jerkim, Conradi, F.E. s.n., 15.7.1887, (GH). Hedmark, Gammelsetran, 860 m, Vileid, M. s.n., 18.8.1998, (O, 235091). Hedmark, Jogåsmyra, 630 m, Kielland-Lund, J. s.n., 9.7.1967, (O, 176158). Hedmark, Os, 780 m, Elven, R. s.n., (O, 4689). Hedmark, Folldal, 840 m, Buttle 8066, Gauhl, 19.8.1965, (M, 0151912). Hjerkinn, Stanley Pease, A. s.n., 21.7.1930, (GH, 20740). Hordaland, Eidfjord, 100 m, Lid, J. s.n., 26.7.1936, (O, 414980). Kongsvold, Dovrefjeld, Nilsson, S.J. s.n., .8.1898, (GH). Nordland county, Sørfold, Apold, W. s.n., Brodal, G.; Skifte, O., 8.8.1954, (H, 1013890). Norland, Nordland fylke, , Notø, A. s.n., 6.7.1932, (M, 0151945). Oppland, Espedal, Berg, R.Y. s.n., 11.8.1973, (O, 260563). Oppland, Lom, 940 m, Berg, R.Y. s.n., 10.8.1994, (O, 174746). Oppland, Grimsdalen, 900 m, Bratli, H. s.n., 28.7.1994, (O, 114994). Sör-Tröndelag, Opdal herred, Kongsvoll, Nilsson, S.J. s.n., .7.1883, (DAO, 257470). Sör-Tröndelag, Oppdal, Near Kongsvoll, Wendelbo, P. s.n., 17.7.1948, (COLO, 100223). Troms, Stordalen, 250 m, Engelskjøn, T. s.n., 24.7.1962, (C). Troms, Lulleborg, 360 m, Lye, K.A. 18728, Berg, T., 1.9.1992, (O, 75397). Troms, Fossbakken, Svendsen, S. s.n., 31.7.1967, (O, 92610). Tromsö, Ringvatso Island, 30 m, Notø, A. s.n., 10.7.1896, (GH). Russia, Chita region, Between the rivers Nerchei and Kuengoi, Sukatschew, W. s.n., 10.7.1911, (DAO, 142005). Chukotka national district, Anui upland region, Zimarskaja, E.V. s.n., Korobkov, A.A.; Yurtsev, B.A., 12.7.1967, (DAO, 139880). Chukotka national district, Rauchua river, Yurtsev, B.P. s.n., 12.7.1967, (BRY, 122530). Chukotski peninsula, river Utaveem, , Kozhevnikov, U.P. s.n., Nechaev, A.A.; Yurtsev, B.A., 27.7.1970, (COLO, 323093). Irkutsk, Balagansk region, Maltsev, I. s.n., 19.6.1905, (GH). Kamchatka region, Olyutorsky area, Harkevich, S. s.n., 9.8.1975, (GH). Komi Republic, Syktyvkar, Andreev, V.D. s.n., 21.6.1909, (H, 1037137). Magadan region, North Even, Hohrjakov, A.P. s.n., 2.8.1976, (CAN, 455497). Republic of Karelia, Karelia onegensis (Kon), Ruuhijärvi, R. 40/02, 9.7.2002, (H, 744530). Republic of Karelia, Belomorskiy District, 10 m, Kravchenko, A. s.n., 21.8.2002, (H, 742280). Republic of Karelia, Karelia pomorica orientalis, Piirainen, M. 5376, 19.8.2004, (H, 807345). Republic of Karelia, Karelia pomorica orientalis, 20 m, Piirainen, M. 5027, 22.8.2002, (H, 741569). Sakha Republic, Bulunsk region, Yurtsev, B.A. s.n., 25.6.1960, (DAO, 257437). Taymyr, River Pyasina, Kozhevnikov, U.P. s.n., 21.8.1982, (CAN, 490439). Between the rivers Nerchei and Kuengoi, Sukachev, V. s.n., 27.7.1970, (DAO, 139887). Kihlman, A.O. s.n., 18.8.1891, (H, 1226124). Chersky, Kozhevnikov, U.P. 714, 24.7.1977, (CAN, 455526). Sweden, Dalecarlia, Morängen, Källström, S. s.n., 7.1887, (GH). Dalecarlia, Fries s.n., (GH). Härjedalen, Valmåsen, Dusén, K. s.n., 11.8.1879, (DAO, 363985). Jämtland, Paroecia Frösö, Asplund, E. s.n., 2.6.1925, (GH). Jämtland, Paroecia Frösö, Asplund, E. s.n., (C). Jämtland, Nyhem, 280 m, s.n., 4.7.1977, (M, 0151939). Jämtland, Häggenås, 400 m, s.n., 3.7.1977, (M, 0151940). Jämtland, Mosjön, 305 m, s.n., 5.7.1977, (M, 0151941). Jämtland Ås, Ahlqvist, A. s.n., 28.6.1902, (GH). Kilpisjärvi, Saana, 50 m, Roivainen, L. s.n., 14.7.1958, (DAO, 257436). Lule Lappmark, Avvakkotunturi, 500 m, Hertel, H. 7248b, 21.7.1967, (M, 0151935). Scandinavia, s.n., 1887, (M, 0151938). Sverige, Torne Lappmark, Pederson, T.M. 5615, 15.7.1960, (O, 314293). Torne Lappmark, Torne Träsk, Torlöf, A. s.n., 12.8.1958, (GH). Torne Lappmark, Låktatjakko, 700 m, Alm, G. 449, 11.8.1935, (GH, 449). Torne Lappmark, Jukkasjärvi, 333 m, Alm, G. s.n., 8.8.1935, (GH, 442). Torne Lappmark, Abisko, Selander, S. s.n., 9.7.1905, (GH). Torne Lappmark, Lake Torneträsk District, 450 m, Alm, G. s.n., 9.8.1958, (O, 539346). Torne Lappmark, Abisko, Hertel, H. 22918, 8.8.1980, (M, 0151931). Torne Lappmark, Abisko, s.n., 13..8, (M, 0151947). Torne Lappmark, Abisko, Hiitonen, I. s.n., 22.7.1950, (H, 1693670). Torne Lappmark, Abisko, 400 m, Alm, G. s.n., 6.8.1958, (H, 1226056). USA, Alaska, Old John Lake Area, Holmen, K. 61-1227, 13.7.1961, (C, 61-1227). 134 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Alaska, Wiseman, Anderson, J.F. 5970, Gasser, G.W., 3.8.1939, (ALA, 1125027). Alaska, Shaw Creek Flats, Elven, R. s.n., Solstad, H., 28.7.2001, (ALA, 1125006). Alaska, Euchre Moutain, 3868 ft, Bennett, B. 194/13273, Loomis, P., 20.6.2003, (ALA, 1125007). Alaska, Smith Lake, Parker, C.L. 15339, 7.8.2003, (ALA, 1125008). Alaska, Central Noatak R. Valley, 100 m, Parker, C.L. 15128, Elven, R.; Solstad, H., 23.7.2003, (ALA, 1124990). Alaska, Kilikmak Cr., 8 m, Parker, C.L. 14722, Elven, R.; Solstad, H., 13.7.2003, (ALA, 1124991). Alaska, Mt. Hayes, 419 m, Duffy, M. 98-201, 15.7.1998, (ALA, 1124993). Alaska, Endicott Mountains, 900 m, Parker, C.L. 12108, Elven, R.; Solstad, H.; Bennett, B.A., 19.7.2002, (ALA, 1124994). Alaska, Neacola Moutains, Caswell, P. 96-205, 19.6.1996, (ALA, 1124995). Alaska, Mt. Michelson, 861 m, Batten, A. 686, 26.7.1973, (ALA, 1124996). Alaska, Howard Pass, 700 m, Parker, C.L. 7648, , 27.7.1997, (ALA, 1124998). Alaska, Table Mountain, 622 m, Mouton, M.A. MM79279, 30.6.1979, (ALA, 1125000). Alaska, Imiaknikpak Lake, 581 m, Murray, D.F. 4314, 27.7.1973, (ALA, 1124970). Alaska, Baird Mountains, 85 m, Parker, C.L. 15299, Elven, R.; Solstad, H., 29.7.2003, (ALA, 1124972). Alaska, Charley River, 850 ft, Larsen, A. 02-2430, Batten, A., 25.7.2002, (ALA, 1124973). Alaska, Bering Land Bridge NPreserve, 250 m, Kelso, T. 87-319, 7.7.1987, (ALA, 1124975). Alaska, McKinley River, 1900 ft, Viereck, L.A. 1613, 30.7.1956, (ALA, 1124982). Alaska, Arctic National Wildlife Range, 430 m, Murray, D.F. 3350, 26.7.1970, (ALA, 1124984). Alaska, Alaska Range, 750 m, Duffy, M. MD02-240, 16.8.2002, (ALA, 1125011). Alaska, Alaska Range, 725 m, Roland, C. 4519, Batten, A.; Goeking, S., 7.1.2000, (ALA, 1125012). Alaska, Solomon, 85 m, s.n., 14.7.2000, (ALA, 1125013). Alaska, Seward Peninsula, 37 m, Murray, D.F. 11077, Yurtsev, B.A.; Kelso, T., 26.7.1992, (ALA, 1125015). Alaska, Kokrine Hills, 275 m, Foote, J. JF4208, 24.6.1980, (ALA, 1125016). Alaska, Fort Wainwright Military Reservation, 115 m, Duffy, M. 95-624, Lipkin, R., 10.7.1995, (ALA, 1125017). Alaska, Jago Lake, Cantlon, J.E. 57- 1613, Gillis, W.T., 28.7.1957, (ALA, 1125021). Alaska, Tanana River, Spetzman, L. 11868, 7.8.1957, (ALA, 1125022). Alaska, Bendeleben Quad, 100 m, Kelso, T. 82-190, 10.8.1982, (COLO, 387320). Alaska, Mt. Mckinley Natl. Park Teklanika River, 792 m, Viereck, L.A. 7427, 3.8.1964, (ALA, 1125025). Alaska, Mt. Mckinley Natl. Park Teklanika River, 792 m, Viereck, L.A. 7427, 3.8.1964, (RMS, 430206). Alaska, Mt. Mckinley Natl. Park Teklanika River, 792 m, Viereck, L.A. 7427, 3.8.1964, (CAN, 362141). Studied specimens of C. cayoutteana subsp. cayouetteana Snow Creek Pass, 7400 ft, Calder, J. 23957, 24.7.1959, (COLO, 148926). Alberta, Snow Creek Pass, 7000 ft, Porsild, A.E. 22673, 29.7.1960, (RM, 529780). British Columbia, Bluster Mt., 2133 m, Thompson, J. s.n., Thompson, M., 14.7.1938, (WTU, 48964). British Columbia, Chipuin Mt., 1828 m, Thompson, J. s.n., Thompson, M., 21.7.1938, (WTU, 17893). British Columbia, Quiniscoe Lake, 2316 m, Calder, J. 19594, Parmelee, J.A.; Taylor, D., 2.8.1956, (WTU, 199618). British Columbia, 7100 ft, Calder, J. 11795, Savile, O., 11.8.1953, (COLO, 118024). British Columbia, Ashnola Range, 7600 ft, Calder, J. 19594, Parmelee, J.A.; Taylor, R.L., 2.8.1958, (RM, 260491). Mexico, Pacheco, Chihuahua, Hartman, C.V. s.n., 10.6.1891, (MICH, 1132452). USA, California, Anderson Mdw., 1950 m, Gierisch, R. 3493, Esplin, D., 25.6.1969, (RMS, 430207). California, Anderson Mdw., 6400 ft, Gierisch, R. 3493, Esplin, D., 25.6.1969, (COLO, 246761). California, Anderson Mdw., Gierisch, R. 3493, Esplin, D., 25.6.1969, (CAS, 690732). California, South Warner Mountains, 9000 ft, Otting, N. NAD27, Lytjen, D., 2.9.2004, (OSC, 219450). Colorado, Bill Moore Lake, 3627 m, Lederer, N. 4257, 31.8.1993, (COLO, 00263731). Colorado, Loch Lomond, 3395 m, Weber, W.A. s.n., Koponen, T.; Nelson, P., 8.8.1972, (CAN, 374041). Colorado, San Juan National Forest, 11900 ft, Rink, G. 3668, 25.7.4, (BRY, 467234). Colorado, Loch Lomond, 11140 ft, Weber, W.A. s.n., Koponen, T.; Nelson, P., 8.8.1972, (COLO, 259883). Colorado, Hagerman Pass, 11980 ft, Hartman, E.L. 6718, Rottman, M.L., 29.8.1986, (COLO, 428741). Colorado, Fraser Exp. Forest, 12000 ft, Weber, W. 8621, Dahl, E., 31.7.1953, (COLO, 76204). Colorado, Mesa Seco, 12300 ft, Johnson, K. J64-117, (COLO, 232659). Montana, Sweet Grass County, 2956 m, Lesica, P. 7663, 27.7.1998, (MONTU, 122991). Montana, Sweet Grass County, 2743 m, Lesica, P. 7362, 10.8.1996, (MONTU, 122399). Montana, Sweet Grass County, 2743 m, Lackshewitz, H. 9909, 15.8.1981, (MONTU, 86558). Montana, Carbon County, 135 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex 2999 m, Ramsden, J. 1625, 10.7.1987, (MONTU, 118978). Montana, Carbon County, 2987 m, Lesica, P. 5583, 15.8.1991, (MONTU, 115081). Montana, Carbon County, 3048 m, Lesica, P. 4483, 11.8.1987, (MONTU, 108435). Montana, Park County, Ramsden, J. 85542, 9.7.1980, (MONTU, 85542). Montana, Carbon County, 3017 m, Lackshewitz, H. 7790, 11.8.1977, (MONTU, 78793). Montana, Sweet Grass County, 2743 m, Lackshewitz, H. s.n., 15.8.1981, (COLO, 355226). Montana, Stillwater County, 2767 m, Evert, E. 24076, 27.7.1992, (RMS, 780026). Montana, Carbon County, 3048 m, Evert, E. 19835, 23.7.1990, (RMS, 619855). Montana, Carbon County, 2987 m, Lackshewitz, H. 7000, 14.9.1976, (WTU, 272540). Montana, Carbon County, 3017 m, Lackshewitz, H. 7790, 11.8.1977, (WTU, 288770). Montana, 9800 ft, Lackschewitz, K.H. 7035, 15.9.1976, (RM, 367206). Montana, Beartooth Pass, 11000 ft, Hermann, F.J. 20079, 20.7.1965, (RMS, 430211). Montana, 9000 ft, Evert, E. 18434, 9.8.1989, (RM, 579301). Montana, Lackschewitz, K.H. 9909, 15.8.1981, (RM, 521779). Montana, 9900 ft, Lackschewitz, K.H. 7790, 11.8.1977, (RM, 367094). Montana, Sweet Grass County, 9000 ft, Lackschewitz, K.H. s.n., 15.8.1981, (GH). Nevada, Browns Cr., 2590 m, Lewis, E. 448, 17.7.1955, (RMS, 390545). Nevada, Browns Cr., 2590 m, Lewis, E. 17.7.1955, (CAN, 550536). Utah, Uinta Mountains, Lewis, E. 512, 15.8.1955, (RMS, 368032). Utah, Gilbert Bench, 3505 m, Goodrich, S. 25583, Huber, A.; Prescott, D., 20.8.1996, (BRY, 392186). Utah, Gilbert Creek, 3493 m, Huber, A. 440, Goodrich, S., 25.8.1993, (BRY, 368578). Utah, Uinta Mountains, Lewis, E. 512, 15.8.1955, (CAN, 515168). Utah, Gilbert Bench, 12100 ft, Goodrich, S. 26303, Huber, A.; Frandsen, J.; Bartlett, F., 9.8.2000, (BRY, 437123). Utah, Ridge saddle, 12600 ft, Huber, A. 4134, 3.8.1999, (BRY, 426752). Utah, Ashley Forest, 11850 ft, Goodrich, S. 23530, Bartlett, F.; Atwood, D.; Nelson, D., 19.8.1991, (BRY, 350794). Washington, Chowder Ridge, 6800 ft, Douglas, G. 4345, Douglas, G., 3.8.1972, (DAO, 621358). Washington, Rocky Mt., 2365 m, Douglas, G. 2887, 19.7.1971, (RMS, 430209). Wyoming, 10700 ft, Mosquin, T. 4817, 2.8.1962, (DAO, 257425). Wyoming, 3279 m, Mellmann-Brown, S. 2575, 7.8.1996, (RMS, 644114). Wyoming, Elk Peak, 3566 m, Hartman, L. 24223, Poll, T., 9.8.1988, (RMS, 533361). Wyoming, 3474 m, Hartman, L. 31265, 19.8.1991, (RMS, 589096). Wyoming, Neely, B. 2435, 18.8.1984, (COLO, 399492). Wyoming, Beartooth Plateau, 3300 m, Weber, W. s.n., 18.8.1973, (COLO, 270915). Wyoming, Beartooth Plateau, 9800 ft, Lackshewitz, H. s.n., 14.9.1976, (COLO, 306544). Wyoming, Cascade Creek, 10300 ft, Evert, E. 18305, 3.8.1989, (COLO, 449077). Wyoming, Lamar River, 10300 ft, Nelson, B.E. 12725, Hartman, R.L., 22.7.1985, (RM, 482304). Wyoming, Beartooth Plateau, 9800 ft, Lackschewitz, K.H. 7000, 14.9.1976, (RM, 367209). Wyoming, Beartooth Plateau, 9800 ft, Dorn, R.D. 3590, 12.8.1980, (RM, 330260). Wyoming, Francs Fork, 11150 ft, Hartman, L. 16805, 14.8.1983, (RM, 558454). Wyoming, Beartooth Plateau, 10800 ft, Mellmann-Brown, S. 2470, 22.7.1996, (RM, 612812). Wyoming, Eastern Wind River Range, 10240 ft, Mills, S. 232a, 18.8.1995, (RM, 603492). Wyoming, Head Elk Creek, 11500 ft, Johnson, W.M. 140, 29.8.1961, (RMS, 401425). Wyoming, Northern Wind River Range, 10240 ft, Mills, S. 230b, 18.8.1995, (RM, 603491). Wyoming, Bug Creek Pass, Absarokas, 11000 ft, Johnson, W.M. 270, 8.8.1962, (RM, 189438-s). Wyoming, Bug Creek Pass, Absarokas, 11000 ft, Johnson, W.M. 270, 8.8.1962, (RMS, 401298). Wyoming, Absaroka Mountains, 10000 ft, Kirkpatrick, R.S. 5901, Kirkpatrick, R.E.B., 14.8.1984, (RM, 558456). Wyoming, Cascade Creek, 10300 ft, Evert, E. 18305, 3.8.1989, (RM, 579204). Wyoming, Absaroka Mountains, 11150 ft, Kirkpatrick, R.S. 5910, Kirkpatrick, R.E.B., 21.8.1984, (RM, 558455). Wyoming, Absaroka Mountains, 10200 ft, Evert, E. 18249, 3.8.1989, (RM, 579080). Wyoming, Absaroka Mountains, 9800 ft, Evert, E. 9608, 20.8.1985, (RM, 623052). Wyoming, Absaroka Mountains, 10000 ft, Hartman, R.L. 19105, 21.8.1984, (RM, 558453). Wyoming, Absaroka Mountains, 11750 ft, Hartman, R.L. 19289, 22.8.1984, (RM, 558452). Wyoming, Absaroka Mountains, 10700 ft, Hartman, R.L. 23927, Poll, T., 5.7.1988, (RM, 536641). Wyoming, West Slope Wind River Range, 10400 ft, Hartman, R.L. 31278, 19.8.1991, (RM, 589095). Wyoming, Absaroka Mountains, 10500 ft, 4416, 20.7.1984, (RM, 558457). Wyoming, Beartooth Plateau, 9570 ft, Fertig, W. 15202, 23.7.1994, (RM, 602345). Wyoming, Mellmann-Brown, S., 24.8.1996, (RM, 615036). Studied specimens of C. cayouetteana subsp. bajasierra 136 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex USA, California, El Dorado Co., Echo Summit, Howell, J.T. 257424, , 1.9.1946, (DAO, 257424). California, El Dorado Co., El Dorado National Forest, 2350 m, Toivonen, H. 661914, Norris, D.H.; Pykälä, J., 23.7.1987, (DAO, 661914). California, El Dorado Co., El Dorado National Forest, 2350 m, Pykälä, J. 6, Norris, D.H.; Toivonen, H., 23.7.1987, (C, 6). California, El Dorado Co., Freel Peak quad, 2292m, Janeway, L. 73322, Schroder, E., 2.9.1998, (CHSC, 73322). California, Plumas County, Blucks Lake quad, 481 m, Janeway, L. 78722, 7.7.2000, (CHSC, 78722). California, Tehama County, Yellow Pine Forest, 1540 m, Ahart, L. 94326, 19.7.2006, (CHSC, 94326). California, Sierra County, Yuba Pass- Weber Lake Rd., 2194 m, Oswald, H. 66824, Ahart, L., 19.8.1996, (CHSC, 66824). California, Nevada County, University of California Trout Lab, 6500 ft, Langenheim, J. 272099, 19.7.1957, (CAN, 272099). California, Nevada County, University of California Trout Lab, 6500 ft, Nisbet, W.A. 272091, 20.7.1957, (CAN, 272091). California, Nevada County, Sagehen Creek, 6300 ft, True, G.H. 845706, Howell, J.T., 29.8.1966, (CAS, 845706). California, Nevada County, University of California Trout Lab, 6500 ft, Langenheim, J. 845707, 19.7.1957, (CAS, 845707). California, Lassen Volcanic National Park, Badger Flat, 6275 ft, Leschke, H. 136120, 10.8.1960, (OSC, 136120). California, Nevada County, Truckee, 2035 m, Naczi, R.F.C., 3.8.2006, (NYBG). California, Nevada County, Truckee, 1980 m, Naczi, R.F.C., 4.8.2006, (NYBG). California, Tulare County, Kaweah Meadows, Howell, J.T. 17724, 5.8.1942, (GH, 17724). Oregon, Lake County, Sycan Marsh, 1524 m, Christy, A. 188302, 23.8.1980, (OSC, 188302). Oregon, Deschutes County, 1981 m, Wilson, B. 178855, 9.8.1990, (OSC, 178855). Oregon, Jackson County, Cascade Mountains, 1636 m, Otting, N. 210656, 28.6.2001, (OSC, 210656). Oregon, Deschutes County, 1926 m, Halpern, C. 159046, Magee, T., 30.8.1982, (OSC, 159046). Studied specimens of C. cayouetteana subsp. altasierra USA, California, Tulare Co., Sierra Nevada, 12000 ft, Howell, J.T. s.n., 5.8.1949, (DAO, 257423). California, Inyo County, Mount Humphreys, 12880 ft, Sharsmith, C.W. 3116, 11.8.1937, (DAO, 257428). California, Inyo County, Mono Mesa, 3657 m, Howell, J.T. s.n., 26.7.1946, (WTU, 137524). California, Mono County, Mt. Dana Plateau, 3505 m, Taylor, D. 7550, 25.7.1979, (COLO, 330874). California, Sierra Nevada, Central Basin, 3444 m, Munz, A. 12669, 26.7.1948, (WTU, 133536). California, Tuolumne County, Kuna Peak, 12500 ft, Sharsmith, C.W. 2681, 21.7.1937, (CAN, 162869). California, Mono County, White Mountains, 11800 ft, Morefield, J.D. 4829, Perala, C., 27.7.1988, (MICH). California, Mono County, Dunderberg Peak, 11800 ft, Taylor, D. 5291, 27.7.1975, (CAS, 856994). California, Fresno County, 11192 ft, Quibell, C.H. 4162, 7.8.1954, (OSC, 96143). California, Inyo County, Mono Mesa, 12000 ft, Howell, J.T. s.n., 26.7.1946, (GH, 12750). 137 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex APPENDIX S2 Figure A.1: Histograms of the six discrete variables scored for the morphometric study. C. capitata (C), C. arctogena (A), C. cayouetteana subsp. cayouetteana (Y), C. cayouetteana subsp. bajasierra (Y2) and C. cayouetteana subsp. altasierra (Y3). X axis represents the measurements and Y axis the number of specimens. 138 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex 139 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.2: Boxplots showing mean interspecific differences between C. capitata (C), C. arctogena (A), C. cayouetteana subsp. cayouetteana (Y), C. cayouetteana subsp. bajasierra (Y2) and C. cayouetteana subsp. altasierra (Y3) for twenty two quantitative and continuous variables. Asterisks to the left of each box denote level of statistical significance based on a Kruskal-Wallis ANOVA. Blue denotes P<0.01 and red P<0.05. Characters are alphabetically arranged. A full description of the characters is given in Table 2.5. 140 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex 141 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex 142 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex 143 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.3: Pistillate scales (above) and periginia (below) of C. capitata (C), C.arctogena (A), C. cayouetteana subsp. cayouetteana (Y), C. cayouetteana subsp. bajasierra (Y2) and C. cayouetteana subsp. altasierra (Y3). 144 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.4: Holotype of C. capitata L. at LINN. 145 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.5: Holotype of C. arctogena Harry Sm. at DAO 146 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.6: Holotype of C. 147 antarctogena Roivanen at H. ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.7: The distribution of C. capitata (circles), C. arctogena (squares), C. cayouetteana subsp. cayouetteana (triangles), C. cayouetteana subsp. bajasierra (crosses) and C. cayouetteana subsp. altasierra (stars) based on all the herbarium specimens examined in this study. 148 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.8: The distribution of C. capitata (circles), C. arctogena (squares), C. cayouetteana subsp. cayouetteana (triangles), C. cayouetteana subsp. bajasierra (crosses) and C. cayouetteana subsp. altasierra (stars) in North America based on all the herbarium specimens examined in this study. 149 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.9: The distribution of Carex capitata and C. arctogena in Europe based on all specimens examined in this study. 150 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.10: The distribution of C. cayouetteana subsp. cayouetteana based on all the herbarium specimens examined in this study. 151 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.11: The distribution of C. cayouetteana subsp. bajasierra based on all the herbarium specimens examined in this study. . 152 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex Figure A.12: The distribution of C. cayouetteana subsp. altasierra based on all the herbarium specimens examined in this study. 153 ________________________________________________________________ ________________________________________________________________ Chapter 2. Taxonomy of the Carex capitata complex 154 Chapter 3 Direct long-distance dispersal best explains the bipolar distribution of Carex arctogena (Carex sect. Capituligerae, Cyperaceae) 155 156 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena Journal of Biogeography (J. Biogeogr.) (2015) ORIGINAL ARTICLE Direct long-distance dispersal best explains the bipolar distribution of Carex arctogena (Carex sect. Capituligerae, Cyperaceae) Tamara Villaverde1*, Marcial Escudero2, Santiago Martın-Bravo1, Leo P. Bruederle3, Modesto Luce~ no1 and Julian R. Starr4,5 1 Botany area, Department of Molecular Biology and Biochemical Engineering, Pablo de Olavide University, 41013 Seville, Spain, 2 Department of Integrative Ecology, Estacion Biologica de Do~ nana (EBD – CSIC), 41092 Seville, Spain, 3Department of Integrative Biology, University of Colorado Denver, Denver 80217–3364, USA, 4Canadian Museum of Nature, Ottawa K1P 6P4, Canada, 5Department of Biology, Gendron Hall, University of Ottawa, Ottawa K1N 6N5, Canada ABSTRACT Aim The bipolar disjunction, a biogeographical pattern defined by taxa with a distribution at very high latitudes in both hemispheres (> 55° N; > 52° S), is only known to occur in about 30 vascular plant species. Our aim was to use the bipolar species Carex arctogena to test the four classic hypotheses proposed to explain this exceptional disjunction: convergent evolution, vicariance, mountain-hopping and direct long-distance dispersal. Location Arctic/boreal and temperate latitudes of both hemispheres. Methods A combination of molecular and bioclimatic data was used to test phylogeographical hypotheses in C. arctogena. Three chloroplast markers (atpF–atpH, matK and rps16) and the nuclear ITS region were sequenced for all species in Carex sections Capituligerae and Longespicatae; Carex rupestris, C. obtusata and Uncinia triquetra were used as outrgroups. Phylogenetic relationships, divergence-time estimates and biogeographical patterns were inferred using maximum likelihood, statistical parsimony and Bayesian inference. Results Carex sections Capituligerae and Longespicatae formed a monophyletic group that diverged during the late Miocene. Two main lineages of C. arctogena were inferred. Southern Hemisphere populations of C. arctogena shared the same haplotype as a widespread circumboreal lineage. Bioclimatic data show that Southern and Northern Hemisphere populations currently differ in their ecological regimes. *Correspondence: Tamara Villaverde, Botany area, Department of Molecular Biology and Biochemical Engineering, Pablo de Olavide University, Ctra. de Utrera km 1 s/n, 41013 Seville, Spain. E-mail: tvilhid@gmail.com Main conclusions Two of the four hypotheses accounting for bipolar disjunctions may be rejected. Our results suggest that direct long-distance dispersal, probably southwards and mediated by birds, best explains the bipolar distribution of C. arctogena. Keywords Biogeography, bipolar distribution, Capituligerae, Carex, climatic niche, Cyperaceae, divergence-time estimation, long-distance dispersal. INTRODUCTION Arctic taxa are often widely distributed, their distributions usually fitting into one of three patterns: circumpolar, amphiAtlantic or amphi-Beringian. When Arctic taxa also occur at very high latitudes in the Southern Hemisphere (> 52° S), they achieve what is known as a bipolar distribution (Moore & Chater, 1971). This remarkable biogeographical pattern provides some of the greatest biological disjunctions known and it has inspired authors in biogeography since the 19th ª 2015 John Wiley & Sons Ltd century (e.g. Darwin, 1859). However, resolving the biogeographical and evolutionary origins of bipolar taxa has been challenging due to the scale of their distributions. Four main mechanisms have been proposed to account for bipolar taxa: (1) vicariance (Du Rietz, 1940), implying fragmentation of a continuous distribution that would date back to the transtropical highland bridges of the Mesozoic (c. 195 million years ago, Ma; Scotese et al., 1988); (2) convergent or parallel evolution of disjunct populations that have independent origins but similar phenotypes through adaptation to comparable http://wileyonlinelibrary.com/journal/jbi doi:10.1111/jbi.12521 157 1 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena T. Villaverde et al. environmental pressures (Scotland, 2011); (3) stepwise longdistance dispersal across the equator via mountain ranges (‘mountain-hopping’, Moore & Chater, 1971; Heide, 2002; Vollan et al., 2006) during the last cold periods of the Pliocene and Pleistocene that extended the polar regions of both hemispheres (Raven, 1963); and (4) direct long-distance seed dispersal by birds, wind or ocean currents (Nathan et al., 2008; and references therein). These hypotheses can now be tested objectively by examining the distribution of haplotypes and by dating molecular phylogenies to better assess the possible evolutionary, climatic and geological changes at the origin of biogeographical patterns (Crisp et al., 2011). Most recent studies addressing the origin of bipolar plants have focused on supraspecific groups (e.g. Euphrasia, Gussarova et al., 2008; Empetrum, Popp et al., 2011) and used molecular data only. Nonetheless, these studies estimated that the divergence of bipolar lineages occurred a maximum of 10 million years ago, and concluded that the best explanation for bipolar distributions was long-distance dispersal. Of the approximately 30 bipolar vascular species that are known (Moore & Chater, 1971), six are found in Carex L., a diverse genus (> 2000 species) that is most common in the cold and temperate regions of the Northern Hemisphere (Reznicek, 1990). Because most Carex species, and especially the bipolar species, live under long-day conditions, Heide (2002) tested whether the plants could reproduce under the short-day conditions seen in the tropics, in an attempt to refute the hypothesis of trans-equatorial mountain-hopping. Heide’s results showed that, at least for Carex canescens L. and Ca- rex magellanica Lam., cool, short-day conditions are sufficient to induce flowering. The few molecular studies that have focused on bipolar Carex are consistent with Heide’s (2002) results. Both Vollan et al. (2006) and Escudero et al. (2010) found low levels of genetic differentiation in five of the six known bipolar species of Carex, suggesting that either mountain-hopping or direct long-distance dispersal was the best explanation for the species’ current distributions. However, neither Vollan et al. (2006) nor Escudero et al. (2010) could determine definitively which hypothesis best explained the distributions of bipolar species. The only remaining bipolar Carex not to have been studied using molecular markers is Carex arctogena Harry Sm. (in Carex sect. Capituligerae K€ uk.), a species that reaches both the Canadian Arctic Archipelago in the Northern Hemisphere and the southernmost region of South America, Tierra del Fuego (Fig. 1). Carex sect. Capituligerae includes two other species: the alpine Carex oreophila C. A. Mey, a species confined to the mountains of south-western Asia, and the circumboreal Carex capitata L. (Egorova, 1999). Although morphological, ecological and molecular data clearly separate C. arctogena from its sister species, C. capitata, in northern Europe (Reinhammar, 1999; Reinhammar & Bele, 2001), these differences are less clear in North America, where these species are considered to form a complex (Murray, 2002). Ecological factors could be influencing the geographical distribution of C. arctogena and C. capitata and may therefore constitute a key element in determining their distributional patterns. The integration of phylogeographical inferences from Figure 1 Distribution map of sampled populations of species in Carex sections Capituligerae and Longespicatae (Cyperaceae). Black circles, C. arctogena A; white circles, C. arctogena B; white triangles, C. capitata A; black triangles, C. capitata B; squares, C. monostachya; cross, C. oreophila; diamond, C. runssoroensis. The dark grey and the dashed regions indicate the distribution of C. arctogena and C. capitata, respectively, obtained from the World Checklist of Selected Plant Families (http://apps.kew.org/wcsp). Journal of Biogeography ª 2015 John Wiley & Sons Ltd 2 158 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena Bipolar disjunction in Carex arctogena DNA sequences with bioclimatic data could thus be valuable in clarifying the evolutionary history of this bipolar species. The goal of this study was to determine which of the four classic hypotheses used to account for bipolar taxa could best explain the distribution of C. arctogena. By evaluating the combined evidence provided by phylogenetic reconstructions, molecular dating and bioclimatic data, we will be able to test biogeographical hypotheses and to improve our understanding of the historical events that promoted the formation of the bipolar disjunction seen in C. arctogena. MATERIALS AND METHODS Sampling known to blur signals of migration and isolation (Schaal & Olsen, 2000). Consequently, this region was used for phylogenetic purposes alone and was only amplified for a subset of samples. Nuclear and plastid regions were amplified and sequenced following the conditions described by Escudero et al. (2008) and Starr et al. (2009), respectively. Minor adjustments (e.g. reagent concentrations or annealing temperature) were sometimes necessary in order to obtain suitable amplification products. Sequence data were assembled and edited using Sequencher 4.10 (Gene Codes, Ann Arbor, MI, USA) and subsequently submitted to GenBank (Appendix S1). Sequences were automatically aligned with muscle (Edgar, 2004) and manually adjusted using Geneious 6.1.7 (Biomatters, Auckland, New Zealand). Carex arctogena has a circumboreal distribution, with its range limited to Patagonia in the Southern Hemisphere (Fig. 1). It is a wind-pollinated herbaceous hemicryptophyte that generally occurs in arctic–alpine habitats and windexposed heaths where the soil water content is low. We obtained plant material representing the entire range of C. arctogena (55 populations), as circumscribed by Egorova (1999). We also included 36 populations of C. capitata and one population of C. oreophila. Two East African species from Carex sect. Longespicatae K€ uk., Carex runssoroensis K. Schum. and Carex monostachya A. Rich., were also sampled (one and two populations, respectively; Fig. 1, and see Appendix S1 in Supporting Information), because molecular studies suggest that C. sect. Longespicatae is sister to C. sect. Capituligerae (e.g. Starr & Ford, 2009). Finally, we used Carex obtusata Lilj., Carex rupestris All. and Uncinia triquetra K€ uk. as outgroups (Starr & Ford, 2009). For all species, one individual per population was sampled, except for five populations of C. arctogena that consisted of two individuals each (Appendix S1). Samples used for the molecular study were obtained from silica-dried leaf material collected in the field and from herbarium specimens (Appendix S1). Vouchers for new collections have been deposited in the herbaria CAN, SI and UPOS. Nucleotide diversity (p; Nei, 1987) and haplotype diversity (Hd; Nei & Tajima, 1983) were calculated for the amplified chloroplast regions of C. arctogena and C. capitata in DnaSP 5.10 (Librado & Rozas, 2009). DnaSP was also used to test for molecular selection in atpF–atpH, rps16 and matK with Tajima’s D (Tajima, 1989) and Fu and Li’s D* and F* (Fu & Li, 1993) neutrality tests. Selective pressure on matK was evaluated using the codon-based Z test (Nei & Gojobori, 1986). To test the null hypothesis of neutral selection, the number of synonymous substitutions per synonymous site (dS), the number of non-synonymous substitutions per nonsynonymous site (dN), and their variances (estimated by bootstrap over 10,000 pseudoreplicates) were calculated for each pair of sequences in Mega 4 (Tamura et al., 2007). Gaps or missing data were deleted in the pairwise distance estimation. Because they showed incongruence due to positive selection, we removed the matK sequences of C. monostachya and C. runssoroensis from subsequent phylogenetic analyses (see Results), mirroring the removal by Gehrke et al. (2010) of ITS sequences that showed incongruence between samples. PCR amplification and sequencing Phylogenetic analyses All regions were amplified by polymerase chain reaction (PCR) from total genomic DNA extracted as described by Starr et al. (2009). We amplified the nuclear ITS region (using the primers ITSA and ITS4; White et al., 1990; Blattner, 1999) and three chloroplast DNA (cpDNA) regions: the atpF–atpH spacer, using primers atpF and atpH (Fazekas et al., 2008); a portion of the matK gene, using primers matK 2.1f_J and matK 5r_J (Plant Working Group, Royal Botanical Gardens Kew, http://www.kew.org/barcoding/protocols.html modified by Chouinard, 2010), and the rps16 intron, using primers rps16F and rps16R (Shaw et al., 2005). The ITS region has been one of the most useful markers for inferring plant phylogenies at low taxonomic levels, but concerted evolution within this multicopy gene family is We obtained a total of 19 sequences of ITS, 87 of atpF–atpH, 85 of matK and 49 of rps16 (Appendix S1). The ITS region was only analysed in combination with the plastid regions due to the low number of sequences obtained. The three plastid loci were analysed independently, to check for incongruence, and in combination using maximum likelihood (ML) and Bayesian inference (BI). The combined nuclear and plastid matrix consisted of 107 sequences with 2835 sites (see Appendix S1). Maximum-likelihood analyses were performed using RAxML 7.2.6 (Stamatakis, 2006), with a GTRGAMMA model of sequence evolution and node support assessed via 1000 bootstrap (BS) pseudoreplicates. Bayesian analyses were executed in MrBayes 3.2 (Ronquist et al., 2012) using the most appropriate nucleotide substitution Genetic variation, neutrality and selection tests Journal of Biogeography ª 2015 John Wiley & Sons Ltd 3 159 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena T. Villaverde et al. model for each partition as chosen by jModelTest (Posada, 2008) under the Akaike information criterion (AIC). The selected nucleotide substitution models were HKY for atpF– atpH, HKY+I for matK, GTR for rps16, HKY+I for ITS1, JC for ITS 5.8S and GTR for ITS2 (Appendix S1). The Markov chain Monte Carlo (MCMC) search was run for five million generations with one tree sampled every 1000 generations and two simultaneous analyses (‘Nruns = 2’) each of four Markov chains (‘Nchains = 4’) started from different random trees. The first 20% of trees were discarded from each run as burn-in. A Bayesian majority-rule consensus tree was calculated in MrBayes with posterior probability (PP) values as a measure of clade support. Trees were edited using FigTree 1.3.1 (http://tree.bio.ed.ac.uk/software/figtree/). Haplotype network We obtained the genealogical relationships among all three cpDNA haplotypes using the plastid matrix and statistical parsimony as implemented in tcs 1.21 (Clement et al., 2000). The maximum number of differences resulting from single substitutions among haplotypes was calculated with 95% confidence limits. The only informative indel (atpF– atpH region) was coded as a presence/absence character for analysis. Gaps due to mononucleotide repeat units (poly-T and poly-A) are considered to be highly homoplastic (Kelchner, 2000) and were therefore treated as missing data. Divergence-time estimation Dated phylogenies were estimated for the nuclear and plastid matrix in beast 1.7.5 (Drummond et al., 2012). All matK sequences were excluded because run convergence was hampered by incongruence in matK, which showed a significant departure from neutrality (Appendix S1). The analysed matrix therefore consisted of 94 ITS, atpF–atpH and rps16 sequences with an aligned length of 2089 sites. All phylogenies were estimated using an uncorrelated log-normal relaxed clock model. A normal age prior with a mean of 13.20 Ma 2.5 Myr was applied to the crown node, based on the previous estimate for the divergence of Carex sections Capituligerae and Longespicatae from the outgroups in the analysis of Escudero & Hipp (2013). Analyses were conducted using two independent MCMC runs of 40 million generations each, assuming a birth–death tree prior with a mean substitution rate set at 1.0. Run convergence and burn-in were assessed in Tracer 1.5 (Rambaut & Drummond, 2009). Maximumclade-credibility (MCC) trees were calculated with TreeAnnotator 1.7.2 (Drummond & Rambaut, 2007) using a posterior probability limit of 0.9 and the mean heights option. Climatic environment – ecological niche Carex arctogena and C. capitata are known to have different ecological preferences in Scandinavia (Reinhammar & Bele, 2001). Because the range limits of species and lineages can be influenced by spatial variation in ecological factors (Wiens, 2011), we obtained values for 19 bioclimatic variables (Appendix S1) as described by Escudero et al. (2013) for each sampled population of species in Carex sections Capituligerae and Longespicatae. To characterize the climatic niche space occupied by each species, we performed a principal components analysis (PCA) of the climatic dataset using the ‘prcomp’ function (sdev, rotation, centre and scale options were set as TRUE) and a phylogenetic PCA using the ‘phyl_pca’ function in the phytools package (assuming Brownian motion and covariance matrix option; Revell, 2009) in R (R Development Core Team, 2014). A phylogenetic size-correction was performed in our dataset for non-independence among the observations for lineages. We represented the data associated with the most important bioclimatic variables retained in the PCA for C. arctogena in boxplots. RESULTS Haplotype diversity and neutrality tests The number of cpDNA haplotypes and haplotype diversity were highest in matK (Nh, 6; Hd, 0.746; nucleotide diversity, p, 0.00397), whereas nucleotide diversity was highest in atpF–atpH (Nh, 5; Hd, 0.725; p, 0.00442; Appendix S1). The number of segregating sites was eight in both matK and atpF–atpH, twice that in rps16. A significant departure from neutrality was found in matK sequences (F*-test, P < 0.05; Appendix S1). Estimates of the average within-group nucleotide substitution rates for matK revealed significant positive selection (dN > dS) in C. monostachya and C. runssoroensis. The matK sequences for these species were therefore eliminated from the subsequent analyses as they could affect the results of phylogenetic reconstructions. Selective pressure has also been detected on matK in other plant groups (e.g. McNeal et al., 2009) and in other chloroplast regions (e.g. Kapralov & Filatov, 2007). Phylogenetic reconstruction Bayesian-inference (BI) and ML analyses revealed strong support (97% BS / 1.00 PP, Fig. 2) for a clade including both sections. Carex monostachya was poorly supported as sister to a large polytomy composed of C. runssoroensis plus C. sect. Capituligerae. Carex sect. Capituligerae was retrieved as an unresolved group with four main lineages (see below). Neither C. arctogena nor C. capitata was resolved as a monophyletic taxon; instead, two different geographically defined lineages were detected for each species: (1) C. arctogena lineage A (90% BS / 0.71 PP) includes samples from Europe and North and South America; (2) C. arctogena lineage B (91% BS / 0.90 PP) only includes samples from western North America; (3) C. capitata lineage A (88% BS / 0.78 PP) includes samples from Russia; and (4) C. capitata lineage Journal of Biogeography ª 2015 John Wiley & Sons Ltd 4 160 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena Bipolar disjunction in Carex arctogena Uncinia triquetra ARG C. obtusata WYO 1 C. obtusata WYO 2 C. obtusata WYO 3 C. rupestris SPA 1 98 0.96 69 94 1 97 Sect. Capituligerae + Longespicatae 0.73 Outgroups C. monostachya KEN 1 C. monostachya KEN 2 C. runssoroensis KEN C. oreophila TUR C. capitata MAG 1 0.78 C. capitata MAG 2 C. capitata MAG 3 88 C. capitata YAK 4 C. arctogena ARG 1 C. arctogena ARG 2 C. arctogena ARG 3 C. arctogena ARG 4 C. arctogena ARG 5 C. arctogena ARG 6 C. arctogena ARG 7 C. arctogena ARG 8 C. arctogena ARG 9 C. arctogena ARG 10 C. arctogena MAN 11 0.71 C. arctogena MAN 12 C. arctogena MAN 13 90 C. arctogena BRC 14 C. arctogena QUE 15 C. arctogena QUE 16 C. arctogena QUE 17 C. arctogena LAB 18 C. arctogena SAS 19 C. arctogena ONT 20 C. arctogena ONT 21 C. arctogena NWH 22 C. arctogena GNL 23 C. arctogena GNL 24 C. arctogena FIN 25 90 C. arctogena QUE 26 87 C. capitata MAG 5 C. capitata RUN 6 C. capitata FIN 7 C. capitata FIN 8 C. capitata FIN 9 C. capitata SWE 10 C. capitata SWE 11 C. capitata SWE 12 C. capitata SWE 13 C. capitata NOR 14 C. capitata ICE 15 C. capitata ICE 16 C. capitata ICE 17 C. capitata ICE 18 C. capitata ASK 23 0.92 C. capitata BRC 21 C. capitata BRC 22 97 C. capitata ALB 19 C. capitata MAN 23 C. capitata MAN 24 C. capitata MAN 25 C. capitata MAN 26 C. capitata MAN 27 C. capitata MAN 28 C. capitata MAN 29 C. capitata ONT 30 C. capitata ONT 31 C. capitata YUK 32 C. capitata YUK 33 C. capitata YUK 34 C. capitata NWT 35 C. capitata NWT 36 60 C. capitata SAS 37 C. arctogena ORE 27 C. arctogena ORE 28 C. arctogena WYO 29 C. arctogena ALB 30 C. arctogena WAS 31 C. arctogena WAS 32 C. arctogena MNT 33 C. arctogena MNT 34 C. arctogena MNT 35 C. arctogena UTA 36 C. arctogena UTA 37 C. arctogena NEV 38 C. arctogena COL 39 C. arctogena COL 40 C. arctogena COL 41 C. arctogena COL 42 0.9 C. arctogena COL 43 91 C. arctogena COL 44 C. arctogena CAL 45 C. arctogena CAL 46 C. arctogena CAL 47 C. arctogena CAL 48 C. arctogena CAL 49 C. arctogena CAL 50 C. arctogena CAL 51 C. arctogena CAL 52 C. arctogena CAL 53 C. arctogena CAL 54 C. arctogena CAL 55 C. arctogena CAL 56 C. arctogena CAL 57 C. arctogena CAL 58 C. arctogena CAL 59 87 C. arctogena CAL 60 C. arctogena CAL 61 C. capitata A Russia C. arctogena A Northern & Southern Hemispheres C. capitata B Northern Hemisphere C. arctogena B W North America 0.003 Figure 2 Majority-rule (50%) consensus tree from the Bayesian analysis of nuclear and chloroplast sequences from Carex sections Capituligerae and Longespicatae (Cyperaceae). Uncinia triquetra, Carex rupestris and C. obtusata were used as outgroups. Numbers above branches represent Bayesian posterior probabilities (> 0.7 PP); numbers below branches represent bootstrap values (> 60% BS) from the maximum-likelihood analyses. The grey rectangle highlights C. arctogena samples from the Southern Hemisphere. Abbreviations after names correspond to geographical regions of the world (Brummitt, 2001) followed by population number. Journal of Biogeography ª 2015 John Wiley & Sons Ltd 5 161 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena T. Villaverde et al. 0.19–1.66 Ma, Table 1). The grouping of Carex arctogena A with C. runssoroensis did not receive statistical support in the MCC tree above 0.9. B (97 BS / 0.92 PP) comprises samples from North America, Europe and Russia. Haplotype network Climatic environment The cpDNA haplotype network (Fig. 3) revealed 10 haplotypes and five missing haplotypes. Geographical structure was detected in most lineages, similar to that found in the phylogenetic reconstruction. We found one unique haplotype in C. arctogena lineage A, four in C. arctogena lineage B, one in C. capitata lineage A and two in C. capitata lineage B. There is a haplotype shared by eight samples of C. arctogena A, C. oreophila, C. monostachya and one individual of C. capitata B. Carex runssoroensis occupied a central position in the network. The 10 C. arctogena samples from the Southern Hemisphere shared the same haplotype as the 10 Northern Hemisphere samples of C. arctogena A. The PCA of the climatic dataset from 94 total populations consisting of C. arctogena (53 individuals; two populations had missing data in the WorldClim database), C. capitata (35), C. oreophila (3), C. monostachya (2) and C. runssoroensis (1) showed that principal component 1 (PC1) explained 98.99% of variance and PC2 explained 0.78% (Fig. 5). The variables with the highest loadings on PC1 were temperature seasonality (BIO4), the mean temperature of the coldest quarter (BIO11), the minimum temperature of the warmest month (BIO6) and isothermality (BIO3; Appendix S1). Maxima and minima for each lineage are shown in Table 2. Similar results were obtained when the analysis was not corrected for the phylogeny (results not shown). Northern and Southern Hemisphere samples of C. arctogena A were clearly separated into two groups. The boxplots of the variables with the highest loadings revealed that northern populations of C. arctogena A tolerate greater temperature oscillations through the year and a wider range of minimum temperatures during the coldest month than populations from the Southern Hemisphere (Table 2, Fig. 6a,b). Estimation of divergence times The dating analyses produced a partly incongruent topology with respect to the BI and ML analyses presented above (Fig. 4, Table 1). The divergence time of the clade comprising Carex sections Capituligerae and Longespicatae was 6.76 Ma (95% highest posterior density interval, HPD, 3.05– 11.29 Ma), which falls in the late Miocene to early Pliocene. The diversification of the clade consisting of C. arctogena, C. capitata, C. oreophila and C. runssoroensis is estimated to have begun 5.0 Ma (95% HPD 2.10–8.03 Ma). The crown nodes of the main lineages obtained in the phylogeny were placed in the late Pleistocene (C. monostachya: 0.13 Ma, 95% HPD 0–0.51 Ma; C. capitata A plus C. oreophila: 0.37 Ma, 95% HPD 0.01–1.17 Ma; C. capitata B: 0.68 Ma, 95% HPD 0.14–1.39 Ma; C. arctogena B: 0.81 Ma, 95% HPD C. arctogena B (3) C. arctogena B (12) DISCUSSION Origin of the bipolar distribution of C. arctogena Our study provides strong evidence for a recent origin of the bipolar disjunction in C. arctogena lineage A. The divergence time for the clade comprising Carex sections Capituligerae C. arctogena B (13) W North America North America & Eurasia C. capitata A (4) C. capitata B (4) C. capitata B (22) C. runssoroensis (1) C. monostachya (2) C. oreophila (1) C. arctogena A (8) C. capitata B (1) C. arctogena B (1) C. arctogena A (20) North & South America Eurasia, North America & Africa Figure 3 tcs haplotype network of concatenated cpDNA sequences of Carex sections Capituligerae and Longespicatae (Cyperaceae). Circles represent haplotypes, lines represent single mutational steps and small black circles are missing haplotypes. Circle shades indicate species, and numbers in parentheses indicate the number of samples per haplotype. Shaded and dashed squares represent the geographical distributions of lineages. Journal of Biogeography ª 2015 John Wiley & Sons Ltd 6 162 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena Bipolar disjunction in Carex arctogena 3.84 Outgroups 0.13 C. monostachya Kenya 6.76 Sect. Capituligerae + Longespicatae 0.37 C. capitata A (Russia) + C. oreophila Turkey 5.00 C. arctogena A (North & * South America) + 2.18 C. runssoroensis Kenya 0.68 C. capitata B (North America & Eurasia) 0.81 C. arctogena B (W North America) MIOCENE 15.0 12.5 10.0 PLIOCENE 7.5 5.0 PLEISTOCENE 0.0 Ma 2.5 Figure 4 Maximum-credibility-clade phylogeny from the Bayesian divergence-time analysis of Carex sections Capituligerae and Longespicatae (Cyperaceae) using a combined matrix of ITS and atpF–atpH and rps16. Node bars represent the 95% highest posterior density intervals for the divergence-time estimates of nodes with posterior probabilities above 0.9. See Table 1 for posterior probabilities and ages inferred for clades. The asterisk denotes that the C. arctogena and C. runssoroensis clade has a posterior probability below 0.5. Table 1 Divergence dates of clades resolved in Carex sections Capituligerae and Longespicate (Cyperaceae), presented as posterior probabilities, mean and median time to the most common recent ancestor in millions of years (Ma) and 95% highest posterior density (HPD) interval obtained from the divergence time analyses of the combined nuclear (ITS) and plastid (atpF–atpH and rps16) matrix. Clade Posterior probability Mean (Ma) Median (Ma) 95% HPD interval Carex sect. Capituligerae + Longespicatae C. monostachya C. runssoroensis + C. oreophila + C. arctogena + C. capitata C. oreophila + C. capitata A C. capitata B C. arctogena B 1.00 0.96 0.64 6.76 0.13 5.00 6.44 0.05 4.81 3.05 0.00 2.31 11.29 0.51 8.03 0.61 0.51 0.96 0.37 0.68 0.81 0.22 0.60 0.72 0.01 0.14 0.19 1.17 1.39 1.66 and Longespicatae (crown node: 6.76 Ma, 95% HPD 3.05– 11.29 Ma; Fig. 4, Table 1) is far younger than the trans-tropical highland bridges (c. 195 Ma; Scotese et al., 1988) and we therefore reject the vicariance hypothesis for the bipolar disjunction of C. arctogena (Du Rietz, 1940). If convergent evolution could explain the bipolar distribution of C. arctogena, northern and southern populations of the species would not share an immediate common ancestor. In contrast, our phylogenetic results place all C. arctogena A samples in a single clade (Fig. 2) and our haplotype data demonstrate that populations from both hemispheres share identical cpDNA haplotypes over the 2207 bp of three chloroplast markers (Fig. 3). This clearly suggests that C. arctogena A is a bipolar monophyletic clade, so we reject a hypothesis of convergent evolution (Stern, 2013). The bipolar disjunction is best explained by long-distance dispersal, which may have been either by mountain-hopping (‘stepping stones’) or by a direct event (a ‘giant leap’). This Journal of Biogeography ª 2015 John Wiley & Sons Ltd 7 163 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena T. Villaverde et al. -8 -6 -4 PC2 -2 0 2 4 C. arctogena A NH C. arctogena A SH C. arctogena B C. capitata A C. capitata B C. monostachya C. oreophila C. runssoroensis -2 0 2 4 6 8 PC1 Table 2 Maximum and minimum values for climatic variables with the highest loadings on principal component 1 by groups of Carex arctogena and C. capitata: BIO4, temperature seasonality; BIO6, minimum temperature of the coldest month; BIO11, mean temperature of the coldest quarter; BIO3, isothermality. C. arctogena A C. arctogena B C. capitata A C. capitata B C. arctogena A Northern Hemisphere C. arctogena A Southern Hemisphere min. max. min. max. min. max. min. max. min. max. min. max. BIO4 BIO6 BIO11 BIO3 31.15 150.98 51.78 96.09 153.45 205.98 37.44 148.76 64.38 150.98 31.15 51.98 34.8 1.7 20.5 0.6 47.1 34.8 33.9 4.9 34.8 13.9 5.1 1.7 27.9 4.8 12.9 7.2 42.0 29.2 29.0 1.7 27.9 10.3 0.1 4.8 17% 51% 31% 46% 16% 20% 16% 36% 17% 27% 45% 51% could have occurred during some of the last cold periods at the end of the Pliocene or in the Pleistocene, which expanded the polar regions in both hemispheres (Raven, 1963; Ball, 1990), or even at present times. Given that all other taxa in Carex section Capituligerae and all but one haplotype are found in the Northern Hemisphere, our data suggest that this dispersal occurred from the Northern to the Southern Hemisphere. The remaining question is: which mechanism better explains the bipolar disjunction – mountain-hopping or direct long-distance dispersal? The mountain-hopping hypothesis (Ball, 1990) proposes a stepwise long-distance migration by mountain peaks as stepping-stones for polar and temperate taxa to cross the ecological barrier presented by the tropics. A route connecting North and South America through the American Cordillera has been in place since the late Miocene (Smith, 1986). For species of Carex, no 10 Figure 5 Scatter plot of the first two principal components, which explain 99.78%, from the principal components analysis depicting the position of the samples of Carex sections Capituligerae and Longespicatae (Cyperaceae) in climatic niche space. ecophysiological adaptations to crossing the short-day conditions of the tropical alpine environment seem to be necessary (Heide, 2002), but we are not aware of any published fossil records or any other evidence for the occurrence of C. arctogena in areas between northern North America and southern South America. If C. arctogena had migrated to South America by the slow and gradual means predicted by mountainhopping, we would expect that such a process would leave a trace of genetic differences in the plastid loci of populations from both hemispheres (Brochmann et al., 2003; Scotland, 2011), as has been shown for other bipolar species (Vollan et al., 2006; Escudero et al., 2010). Although we cannot completely reject the mountain-hopping hypothesis, the absence of genetic variability between populations of C. arctogena A from both hemispheres fits better with a recent and direct long-distance dispersal. Direct long-distance dispersal has been shown to be remarkably frequent in some other species of Cyperaceae (e.g. Viljoen et al., 2013). The utricle surrounding Carex fruit can show some features for wind-dispersal, as seen in Carex physodes (Egorova, 1999) or for animal-dispersal as seen in Carex microglochin (Savile, 1972). However, with the exception of the bladder-like utricle, fruits and surrounding fruit structures of Carex generally lack any obvious morphological features for dispersal by abiotic or biotic forces. The perigynia of Carex arctogena do not have any apparent mechanism for dispersal; even the aculeolate teeth on the margin of the perigynia are variable in number, sometimes being entirely absent. We suggest that relatively unspecialized structures for dispersal might play a role in the distribution of C. arctogena. We regard the hypothesis of non-standard vector-mediated dispersal, either by abiotic or biotic forces, as a possible explanation of the bipolar disjunction of C. arctogena. It is possible that populations of C. arctogena in the Southern Hemisphere may have been the result of an accidental anthropogenic introduction. In this scenario, adaptation to local environmental conditions, biotic interactions and demographic processes of this species would all have been Journal of Biogeography ª 2015 John Wiley & Sons Ltd 8 164 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena Bipolar disjunction in Carex arctogena Figure 6 Carex arctogena boxplots comparing the four bioclimatic variables with the highest loadings on the first component of the bioclimatic PCA for the different lineages found (A and B) and for Northern and Southern Hemisphere samples (A NH and A SH, respectively). (a) Temperature seasonality (BIO4); (b) minimum temperature of the warmest month (BIO6); (c) mean temperature of the coldest month (BIO11); (d) isothermality (BIO3). Each box represents the interquartile range which contains 50% of the values and the median (horizontal line across the box). The whiskers extending from the box represent the highest and lowest values observed, excluding outliers (dots). (a) (b) (c) (d) established relatively quickly (Theoharides & Dukes, 2007). Populations of C. arctogena in Patagonia occur in well-conserved habitats and most are only accessible on foot. Specimens of C. arctogena from Patagonia are few in the South American herbaria BA, BAA, BAB, BCRU, HIP and SI, with some dating to the late 1880s, when the human influence in the southernmost parts of South America was very limited. Although we cannot rule out an anthropogenic introduction of this species to South America, it seems unlikely. Bird-mediated direct long-distance dispersal from North America has already been used to explain a bipolar disjunction in crowberries (Empetrum; Popp et al., 2011). Most migratory birds that disperse seeds live in temperate and boreal regions (Wheelwright, 1988). For birds to act as vectors for seed dispersal by endo- or ectozoochory, the seeds must have morphological features for association with these animals, and must be able to maintain their viability after intestinal transit to allow for establishment in new environments (Gillespie et al., 2012). Although Carex arctogena fruits lack obvious morphological features for zoochorous dispersal, other structures or features that are not directly related with dispersal syndromes may be involved, including anatomical features such as deposits of silica in the pericarp that harden seeds (Graven et al., 1996; Prychid et al., 2004). These silica deposits could protect seeds when passing through birds’ alimentary tracts (Graven et al., 1996) but could also make the seeds as hard as pebbles and useful for grinding other organic material in bird gizzards. Carex fruits could therefore be doubly preferred by birds – both as nourishment and as gastroliths (Alexander et al., 1996). Some birds from North America, such as the pectoral sandpiper, Calidris melanotos (Holmes & Pitelka, 1998), and the lesser yellowlegs, Tringa flavipes (Tibbitts & Moskoff, 1999), are known to feed in sedge meadows before migrating southwards to their wintering grounds in South America. Their breeding ranges closely match the current distribution of C. arctogena A in both hemispheres (Fig. 1). Although current bird migratory patterns do not necessarily coincide with past migrations, these observations suggest that the bipolar disjunction in C. arctogena may have originated via bird-mediated long-distance dispersal. Additionally, dispersal may occur through accidental displacement – vagrant birds or migrants, such as those flying to Australia or New Zealand, deviating widely from their normal route (Battley et al., 2012). With satellite telemetry, Gill et al. (2009) recorded transoceanic flights of bar-tailed godwits (Limosa lapponica baueri) from Alaska to New Zealand and showed that they can fly 10,153 km ( 1043 SD) non-stop in 7.8 days ( 1.3 SD). This extraordinary flight, combined with species that can be preferentially chosen for fuel, could help species such as C. arctogena to achieve a bipolar distribution by means of direct long-distance dispersal. Climatic regime differentiation Theoretically, C. arctogena A is most likely to become established at the high latitudes and elevations in the Southern Hemisphere that have similar climatic conditions to those of northern populations (Carlquist, 1966). Although our results from the bioclimatic data show that Southern Hemisphere populations currently differ from Northern Hemisphere populations of C. arctogena A in their climatic niches (Fig. 6), differences in community assembly, which suggest differences in competitive interactions, may explain how C. arctogena A was able to establish itself in South America after one or more initial dispersal events (Waters, 2011). Such differences could have allowed C. arctogena to shift into new habitats and climate zones (Broennimann et al., 2007). Alternatively, establishment could have taken place at a time when both areas had similar climatic conditions. Journal of Biogeography ª 2015 John Wiley & Sons Ltd 9 165 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena T. Villaverde et al. CONCLUSIONS Evidence from multiple analytical approaches was used to infer the possible mechanisms underlying the distribution of a bipolar species. Bioclimatic data, phylogenetic and phylogeographical analyses and divergence-time estimates have been integrated to test hypotheses that are traditionally used to account for the origin of bipolar distributions at the species level. Our study highlights the importance of long-distance dispersal in explaining this extraordinary pattern of plant distribution, although further comparative studies using multiple bipolar species are necessary to test the same explanation in other phylogenetically independent cases. ACKNOWLEDGEMENTS We thank the staff of the following herbaria for giving us access to their collections and providing plant material: A, ALA, BA, BAA, BAB, BCRU, BRY, C, CAN, CAS, CCO, CHSC, COLO, DAO, E, GH, H, HIP, ICEL, M, MICH, MONTU, MOR, O, OSC, RM, RMS, SI, UBC, UNM, UPOS, UTEP, WIN and WTU. Thanks are also due to three anonymous referees and to the editor Robert Whittaker. We would also like to thank E. Maguilla (Universidad Pablo de Olavide, Seville, Spain; UPO) for his help with map editing, M. Gosselin (Canadian Museum of Nature, Ottawa, Canada; CMN) for providing information related to bird dispersal, W. Sawtell (University of Ottawa, Canada) and P. Vargas (Real Jardın Botanico de Madrid, Spain) for assistance in plant collections, and R. Bull (CMN), M. Mıguez and F. J. Fernandez (UPO) for technical support. In addition, we are grateful to University of Ottawa undergraduate students A. Ginter for translations of Russian label data and J. E. Pender for assistance with databasing label data and DNA sequencing. This research was supported by a Natural Sciences and Engineering Research Council of Canada (NSERC) Discovery Grant to J.R.S. and by a Talentia Scholarship from the Regional Ministry of Economy, Innovation, Science and Employment of Andalusia awarded to T.V. for MSc research at the University of Ottawa. Further support was provided by the Spanish Ministry of Science and Technology through project CGL2012-38744 and from the Regional Ministry of Economy, Innovation, Science and Employment of Andalucia through the project RNM-2763. REFERENCES Alexander, S.A., Hobson, K.A., Gratto-Trevor, C.L. & Diamond, A.W. (1996) Conventional and isotopic determination of shorebird diets at an inland stopover: the importance of invertebrates and Potamogeton pectinatus tubers. Canadian Journal of Zoology, 74, 1057–1068. Ball, P.W. (1990) Some aspects of the phytogeography of Carex. Canadian Journal of Botany, 68, 1462–1472. Battley, P.F., Warnock, N., Tibbitts, T.L., Gill, R.E., Piersma, T., Hassell, C.J., Douglas, D.C., Mulcahy, D.M., Gartrell, B.D., Schuckard, R., Melville, D.S. & Riegen, A.C. (2012) Contrasting extreme long-distance migration patterns in bar-tailed godwits Limosa lapponica. Journal of Avian Biology, 43, 21–32. Blattner, F.R. (1999) Direct amplification of the entire ITS region from poorly preserved plant material using recombinant PCR. BioTechniques, 27, 1180–1186. Brochmann, C., Gabrielsen, T.M., Nordal, I., Landvik, J.Y. & Elven, R. (2003) Glacial survival or tabula rasa? The history of North Atlantic biota revisited. Taxon, 52, 417–450. Broennimann, O., Treier, U.A., M€ uller-Sch€arer, H., Thuiller, W., Peterson, A.T. & Guisan, A. (2007) Evidence of climatic niche shift during biological invasion. Ecology Letters, 10, 701–709. Brummitt, R.K. (2001) World geographical scheme for recording plant distributions, 2nd edn. Hunt Institute for Botanical Documentation, Pittsburgh, PA. Carlquist, S. (1966) The biota of long-distance dispersal. I. Principles of dispersal and evolution. Quarterly Review of Biology, 41, 247–270. Chouinard, B.N. (2010) DNA barcodes for the Cariceae (Carex & Kobresia, Cyperaceae) of North America, north of Mexico. MSc Thesis, University of Ottawa, Ottawa, ON. Clement, M., Posada, D. & Crandall, K.A. (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657–1660. Crisp, M.D., Trewick, S.A. & Cook, L.G. (2011) Hypothesis testing in biogeography. Trends in Ecology and Evolution, 26, 66–72. Darwin, C. (1859) On the origin of species by means of natural selection. John Murray, London. Drummond, A.J. & Rambaut, A. (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology, 7, 214. Drummond, A.J., Suchard, M.A., Xie, D. & Rambaut, A. (2012) Bayesian phylogenetics with BEAUti and the BEAST 1.7. Molecular Biology and Evolution, 29, 1969–1973. Du Rietz, G.E. (1940) Problems of the bipolar plant distribution. Acta Phytogeographica Suecica, 13, 215–282. Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32, 1792–1797. Egorova, T.V. (1999) The sedges (Carex L.) of Russia and adjacent states (within the limits of the former USSR). Missouri Botanical Garden Press, St Louis, MO. Escudero, M. & Hipp, A. (2013) Shifts in diversification rates and clade ages explain species richness in higher-level sedge taxa (Cyperaceae). American Journal of Botany, 100, 2403–2411. Escudero, M., Valcarcel, V., Vargas, P. & Luce~ no, M. (2008) Evolution in Carex L. sect. Spirostachyae (Cyperaceae): a molecular and cytogenetic approach. Organisms Diversity and Evolution, 7, 271–291. Escudero, M., Valcarcel, V., Vargas, P. & Luce~ no, M. (2010) Bipolar disjunctions in Carex: long-distance dispersal, vicariance, or parallel evolution? Flora, 205, 118–127. Journal of Biogeography ª 2015 John Wiley & Sons Ltd 10 166 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena Bipolar disjunction in Carex arctogena Escudero, M., Maguilla, E. & Luce~ no, M. (2013) Selection by climatic regime and neutral evolutionary processes in holocentric chromosomes (Carex gr. laevigata: Cyperaceae): a microevolutionary approach. Perspectives in Plant Ecology, Evolution and Systematics, 15, 118–129. Fazekas, A.J., Burgess, K.S., Kesanakurti, P.R., Graham, S.W., Newmaster, S.G., Husband, B.C., Percy, D.M., Hajibabaei, M. & Barrett, S.C.H. (2008) Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well. PLoS ONE, 3, e2802. Fu, Y.X. & Li, W.H. (1993) Statistical tests of neutrality of mutations. Genetics, 133, 693–709. Gehrke, B., Martın-Bravo, S., Muasya, M. & Luce~ no, M. (2010) Monophyly, phylogenetic position and the role of hybridization in Schoenoxiphium Nees (Cariceae, Cyperaceae). Molecular Phylogenetics and Evolution, 56, 380–392. Gill, R.E., Tibbitts, T.L., Douglas, D.C., Handel, C.M., Mulcahy, D.M., Gottschalck, J.C., Warnock, N., McCaffery, B.J., Battley, P.F. & Piersma, T. (2009) Extreme endurance flights by landbirds crossing the Pacific Ocean: ecological corridor rather than barrier? Proceedings of the Royal Society B: Biological Sciences, 276, 447–457. Gillespie, R.G., Baldwin, B.G., Waters, J.M., Fraser, C.I., Nikula, R. & Roderick, G.K. (2012) Long-distance dispersal: a framework for hypothesis testing. Trends in Ecology and Evolution, 27, 47–56. Graven, P., de Kroster, C.G., Boon, J.J. & Bouman, F. (1996) Structure and macromolecular composition of the seed coat of the Musaceae. Annals of Botany, 77, 105–122. Gussarova, G., Popp, M., Vitek, E. & Brochmann, C. (2008) Molecular phylogeny and biogeography of the bipolar Euphrasia (Orobanchaceae): recent radiations in an old genus. Molecular Phylogenetics and Evolution, 48, 444–460. Heide, O.M. (2002) Climatic flowering requirements of bipolar sedges, Carex spp., and the feasibility of their transequatorial migration by mountain-hopping. Oikos, 99, 352–362. Holmes, R.T. & Pitelka, F.A. (1998) Pectoral Sandpiper (Calidris melanotos). The birds of North America, No. 348 (ed. by A. Poole and F. Gill). Academy of Natural Sciences, Philadelphia, PA. Kapralov, M.V. & Filatov, D.A. (2007) Widespread positive selection in the photosynthetic Rubisco enzyme. BMC Evolutionary Biology, 7, 73. Kelchner, S.A. (2000) The evolution of non-coding chloroplast DNA and its application in plant systematics. Annals of the Missouri Botanical Garden, 87, 482–498. Librado, P. & Rozas, J. (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25, 1451–1452. McNeal, J.R., Kuehl, J.V., Boore, J.L., Leebens-Mack, J. & dePamphilis, C.W. (2009) Parallel loss of plastid introns and their maturase in the genus Cuscuta. PLoS ONE, 4, e5982. Moore, D.M. & Chater, A.O. (1971) Studies on bipolar species I. Carex. Botaniska Notiser, 124, 317–334. Murray, D.F. (2002) Flora of North America North of Mexico, Vol. 23 (ed. by the Flora of North America Editorial Committee), pp. 569–570. Oxford University Press, New York and Oxford. Nathan, R., Schurr, F.M., Spiegel, O., Steinitz, O., Trakhtenbrot, A. & Tsoar, A. (2008) Mechanisms of long-distance seed dispersal. Trends in Ecology and Evolution, 23, 638–647. Nei, M. (1987) Molecular evolutionary genetics. Columbia University Press, New York. Nei, M. & Gojobori, T. (1986) Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Molecular Biology and Evolution, 3, 418–426. Nei, M. & Tajima, F. (1983) Maximum likelihood estimation of the number of nucleotide substitutions for restriction sites data. Genetics, 105, 207–216. Popp, M., Mirre, V. & Brochmann, C. (2011) A single MidPleistocene long-distance dispersal by a bird can explain the extreme bipolar disjunction in crowberries (Empetrum). Proceedings of the National Academy of Sciences USA, 108, 6520–6525. Posada, D. (2008) jModelTest: phylogenetic model averaging. Molecular Biology and Evolution, 25, 1253–1256. Prychid, C.J., Rudall, P.J. & Gregory, M. (2004) Systematics and biology of silica bodies in monocotyledons. Botanical Review, 69, 377–440. R Development Core Team (2014) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. Available at: http:// www.r-project.org/. Rambaut, A. & Drummond, A.J. (2009) Tracer v1.5. University of Edinburgh, Edinburgh, UK. Available at: http:// tree.bio.ed.ac.uk/software/ tracer/. Raven, P.H. (1963) Amphitropical relationships in the floras of North and South America. Quarterly Review of Biology, 38, 151–177. Reinhammar, L.G. (1999) Allozyme differentiation between the lowland Carex capitata and the alpine Carex arctogena (Cyperaceae) in Scandinavia. Biological Journal of the Linnean Society, 67, 377–389. Reinhammar, L.G. & Bele, B. (2001) Variation in morphological characters and habitat requirements in Carex capitata and Carex arctogena (Cyperaceae) in Norway and Sweden. Nordic Journal of Botany, 21, 497–512. Revell, L.J. (2009) Size-correction and principal components for interspecific comparative studies. Evolution, 63, 3258– 3268. Reznicek, A.A. (1990) Evolution in sedges (Carex, Cyperaceae). Canadian Journal of Botany, 68, 1409–1432. Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., H€ ohna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology, 61, 539–542. Journal of Biogeography ª 2015 John Wiley & Sons Ltd 11 167 ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena T. Villaverde et al. Savile, D.B.O. (1972) Arctic adaptations in plants. Monograph No. 6. Canada Department of Agriculture Research Branch, Ottawa, Canada. Schaal, B.A. & Olsen, K.M. (2000) Gene genealogies and population variation in plants. Proceedings of the National Academy of Sciences USA, 97, 7024–7029. Scotese, C.R., Gahagan, L.M. & Larson, R.L. (1988) Plate tectonic reconstructions of the Cretaceous and Cenozoic ocean basins. Tectonophysics, 155, 27–48. Scotland, R.W. (2011) What is parallelism? Evolution and Development, 13, 214–227. Shaw, J., Lickey, E.B., Beck, J.T., Farmer, S.B., Liu, W., Miller, J., Siripun, K.C., Winder, C.T., Schilling, E.E. & Small, R.L. (2005) The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis. American Journal of Botany, 92, 142–166. Smith, J.M.B. (1986) Origins of Australasian tropicalpine and alpine floras. Flora and fauna of alpine Australasia: ages and origins (ed. by B.A. Barlow), pp. 109–128. CSIRO Publishing, Melbourne. Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688–2690. Starr, J.R. & Ford, B.A. (2009) Phylogeny and evolution in Cariceae (Cyperaceae): current knowledge and future directions. Botanical Review, 75, 110–137. Starr, J.R., Naczi, R.F.C. & Chouinard, B.N. (2009) Plant DNA barcodes and species resolution in sedges (Carex, Cyperaceae). Molecular Ecology Resources, 9 (Suppl. S1), 151–163. Stern, D.L. (2013) The genetic causes of convergent evolution. Nature Reviews Genetics, 14, 751–764. Tajima, F. (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123, 585–595. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4. Molecular Biology and Evolution, 24, 1596– 1599. Theoharides, K.A. & Dukes, J.S. (2007) Plant invasion across space and time: factors affecting nonindigenous species success during four stages of invasion. New Phytologist, 176, 256–273. Tibbitts, T.L. & Moskoff, W. (1999) Lesser Yellowlegs (Tringa flavipes). The birds of North America, No. 427 (ed. by A. Poole and F. Gill). The Birds of North America, Philadelphia, PA. Viljoen, J.-A., Muasya, A.M., Barrett, R.L., Bruhl, J.J., Gibbs, A.K., Slingsby, J.A., Wilson, K.L. & Verboom, G.A. (2013) Radiation and repeated transoceanic dispersal of Schoeneae (Cyperaceae) through the southern hemisphere. American Journal of Botany, 100, 2494–2508. Vollan, K., Heide, O.M., Lye, K.A. & Heun, M. (2006) Genetic variation, taxonomy and mountain-hopping of four bipolar Carex species (Cyperaceae) analysed by AFLP fingerprinting. Australian Journal of Botany, 54, 305–313. Waters, J.M. (2011) Competitive exclusion: phylogeography’s ‘elephant in the room’? Molecular Ecology, 20, 4388–4394. Wheelwright, N.T. (1988) Fruit-eating birds and bird-dispersed plants in the tropics and temperate zone. Trends in Ecology and Evolution, 3, 270–274. White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications (ed. by M. Innis, D. Gelfand, D. Sninsky and T. White), pp. 315–322. Academic Press, Orlando, FL. Wiens, J.J. (2011) The niche, biogeography and species interactions. Philosophical Transactions of the Royal Society B: Biological Sciences, 366, 2336–2350. SUPPORTING INFORMATION Additional Supporting Information may be found in the online version of this article: Appendix S1 Studied material, molecular characteristics of the amplified regions, and results from the principal components analysis of 19 bioclimatic variables from the WorldClim database, both corrected for phylogeny and uncorrected. BIOSKETCH Tamara Villaverde is a PhD student at Pablo de Olavide University, Seville (Spain). Her research is focused on the evolution and phylogeography of angiosperms, with special interest in the biogeography and systematics of the genus Carex (Cyperaceae). Authors contributions: M.E., M.L., L.P.B. and J.R.S. conceived the idea; T.V., S.M.-B., L.P.B., M.L. and J.R.S. collected the plant material; T.V., M.E. and S.M.-B. carried out the lab work and analysed the data; T.V., M.E. and S.M.-B. led the writing and drafted the manuscript, and all authors contributed to its preparation. Editor: Robert Whittaker Journal of Biogeography ª 2015 John Wiley & Sons Ltd 12 168 Table S7 Bioclimatic variables used. 169 Table S6 Loadings matrix obtained by the principal components analysis corrected by phylogeny of 19 bioclimatic variables on Carex sections Capituligerae and Longespicatae. Table S5 Loadings matrix obtained by the principal components analysis not corrected by phylogeny of 19 bioclimatic variables on Carex sections Capituligerae and Longespicatae. Table S4 Average within-group nucleotide substitution estimates for the matK gene of the complete dataset. Table S3 Locus information for the regions amplified in the study. Table S2 Characteristics of the DNA regions sequenced. Table S1 List of material studied. Appendix S1 Studied material, molecular characteristics of the amplified regions and results from the principal components analysis of 19 bioclimatic variables from the WorldClim database, uncorrected and corrected for phylogeny. Tamara Villaverde, Marcial Escudero, Santiago Martín-Bravo, Leo P. Bruederle, Modesto Luceño and Julian R. Starr Direct long-distance dispersal best explains the bipolar distribution of Carex arctogena (Carex sect. Capituligerae, Cyperaceae) SUPPORTING INFORMATION Journal of Biogeography ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena FIN 25 GNL 23 GNL 24 LAB 18 MAN 11 MAN 12 C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena BRC 14 Pop. code C. arctogena Species 58.06000 60.00000 51.88333 64.05000 67.90000 68.22200 55.61667 Latitude ΫͺǤ͵ͻͻͲͲ ΫͻǤͺ͵͵͵͵ ΫͷǤͻͷͲͲͲ ΫͶͻǤͻͷͲͲͲ ΫͶͻǤͶͳ 23.62700 ΫͳʹʹǤͷͲͲͲ Longitude Coordinates 170 Canada, British Columbia, Pine Pass. G. W. Argus 8831. 12/7/1973. (CAN372267) Finland, Enontekiö. H. Väre 17177. 17/7/2006. (H-809948) Greenland, Arfersoprflk. B. Fredskild & V. Dalgaard s.n. 19/8/1987. (COLO456814) Greenland, Pingorssuaq kitdleq. S. Hanfgam 83-175. 11/7/1983. (C17/2009N3) Canada, Labrador, Esker area. Y. Mäkinen & E. Kankainen s.n. 21/7/1967. (CAN-314758) Canada, Manitoba, Baralzon Lake. H. J. Scoggan 22434 & W. K. W. Baldwin. 18/7/1950. (WIN, 22434) Canada, Quebéc, Fort Chimo. A. Legault 6782. 22/7/1963. (COLO491481) Voucher arctogena A NH arctogena A NH arctogena A NH arctogena A NH arctogena A NH arctogena A NH arctogena A NH Clade — — — KP984471 — KP984469 — ITS KP996281 KP996284 KP996287 — KP996285 — KP996286 atpF–atpH KP996368 KP996371 KP996375 — KP996372 — KP996374 matK GenBank accession numbers — — KP996451 — — — — rps16 Table S1 List of material studied of Carex arctogena, C. capitata, C. monostachya, C. oreophila, C. runssoroensis, C. rupestris, C. obtusata and Uncinia triquetra including population code, coordinates, voucher information, corresponding clade and GenBank accessions for markers used for molecular studies. Population codes correspond to geographical regions of the world (Brummitt, 2001) and population number. ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena ONT 20 ONT 21 QUE 15 QUE 16 QUE 17 QUE 26 SAS 19 ARG 1 C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena MAN 13 Pop. code C. arctogena Species ΫͷͶǤ͵͵͵ʹͲ 59.91667 58.15000 52.75000 52.87400 59.26667 55.11160 54.36280 59.36667 Latitude ΫǤͶͶͻͲ ΫͳͲͳǤ ΫͺǤͶͳͲͲͲ Ϋ͵Ǥͺͺ͵͵͵ ΫͺʹǤͺ͵ͲͲ ΫʹǤͷͺ͵͵͵ Ϋͻ͵Ǥ͵ͷͷͻͲ ΫͺͶǤͶͻͷͲ Ϋͻ6.23333 Longitude Coordinates 171 Canada, Manitoba, Hudsons Bay Co., Duck Lake. H. J. Scoggan 8288 & W. K. W. Baldwin. 19/8/1950. (CAN201506) Canada, Ontario, Kenora District, Patricia Portion. J. L. Riley 11856. 12/8/1980. (CAN-462937) Canada, Ontario, Hudson Bay Lowlands. A. E. Porsild et al. 19898. 4/7/1957. (CAN-278707) Canada, Quebec, Lac Payne. A. Legault A7849. 2/8/1965. (CCO-23398) Canada, Quebec, Boatswain Bay. W. K. W. Baldwin 406 et al. 8/7/1947. (CAN17333) Canada, Quebéc, Lac Jaucourt Region, Lichteneger Lake. G. W. Argus 9221. 16/7/1974. (CAN-3779977) Canada, Quebec, Fort Chimo. T. Sorensen 293. 17/7/1959. (C15/2009N4) Canada, Saskatchewan, vicinity of Patterson Lake. G. W. Argus s.n. 20/7/1963. (CAN-282691) Argentina, Tierra del Fuego, Tolhuin. S. Martín-Bravo et al. 40SMB10(1). 14/1/2010. (UPOS-4271) Voucher arctogena A SH arctogena A NH arctogena A NH arctogena A NH arctogena A NH arctogena A NH arctogena A NH arctogena A NH arctogena A NH Clade KP984465 — KP984474 — — — — — — ITS — KP996290 — KP996288 KP996283 KP996280 KP996282 KP996354 KP996289 atpF–atpH KP996361 KP996378 — KP996376 KP996370 KP996367 KP996369 — KP996377 matK GenBank accession numbers KP996445 KP996454 — KP996452 — — — — KP996453 rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena ARG 2 ARG 3 ARG 4 ARG 5 ARG 6 ARG 7 ARG 8 ARG 9 ARG 10 C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena Pop. code C. arctogena Species Ϋ͵ͷǤʹͺ͵͵͵ ΫͶͻǤʹ ΫͶͺǤͺʹͳ͵ Ϋͷ͵Ǥͻ͵ʹ͵Ͳ ΫͶͺǤͺʹͳ͵ ΫͶͺǤͳͲͷ ΫͶͺǤͳͲͷ Ϋͷ͵Ǥͻ͵ͲͲͲ ΫͷͶǤ͵ͷͳͲ Latitude ΫͻǤͷ͵͵͵͵ ΫͳǤ ΫͳǤͲͷʹͷͲ ΫͺǤͲͺͺͲ ΫͳǤͲͷʹͷͲ ΫͳǤͲͷͲ81 ΫͳǤͲͷͲͺͳ ΫͺǤͲͺͺͲͲ ΫǤͷͲͲͲ Longitude Coordinates 172 Argentina, Tierra del Fuego, Tolhuin. S. Martín-Bravo et al. 35SMB10(1). 12/1/2010. (UPOS-4272) Argentina, Tierra del Fuego, Río Grande. J. Starr 10015 & T. Villaverde. 13/1/2010. (CAN) Argentina, Santa Cruz, Los Glaciares National Park. J. Starr 10020 & T. Villaverde. 21/1/2010. (CAN) Argentina, Santa Cruz, Los Glaciares National Park. J. Starr 10020 & T. Villaverde. 21/1/2010. (CAN) Argentina, Santa Cruz, Los Glaciares National Park. J. Starr 10023 & T. Villaverde. 22/1/2010. (CAN) Argentina, Tierra del Fuego, Río Grande. J. Starr 10015 & T. Villaverde. 13/1/2010. (CAN) Argentina, Santa Cruz, Los Glaciares National Park. J. Starr 10023 & T. Villaverde. 22/1/2010. (CAN) Argentina, Santa Cruz, Sierra Baguales, M. K. Arroyo 85201. 16/1/1985. (HIP10500) Argentina, Neuquén, Chos Malal. O. Boeckle et al. s.n. 30/1/1964. (BAA11368) Voucher arctogena A SH arctogena A SH arctogena A SH arctogena A SH arctogena A SH arctogena A SH arctogena A SH arctogena A SH arctogena A SH Clade — — — — — — — — KP984466 ITS KP996353 KP996350 KP996349 KP996348 KP996279 KP996278 KP996277 KP996276 — atpF–atpH — — — — KP996366 KP996365 KP996364 KP996362 KP996362 matK GenBank accession numbers — KP996485 KP996484 KP996483 KP996450 KP996449 KP996448 KP996447 KP996446 rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena ALB 30 CAL 45 CAL 46 CAL 47 CAL 48 CAL 49 CAL 51 CAL 52 CAL 53 CAL 54 C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena CAL 36 Pop. code C. arctogena Species 39.41917 39.42472 39.49500 39.50191 40.10400 39.47800 40.12739 40.10222 40.10253 51.61000 41.24700 Latitude ΫͳͳͻǤͶ͵͵͵ ΫͳʹͲǤʹͷ ΫͳʹͲǤͶͳͳͲͲ ΫͳʹͲǤͳͺ͵ʹͷ ΫͳʹͳǤͷͲʹͲͲ ΫͳʹͲǤʹͻʹͲͲ ΫͳʹͲǤͷͲͻͲ͵ ΫͳʹͲǤͶͻͻͳ ΫͳʹͲǤͶͻͻͻʹ ΫͳͳͷǤͺʹͳͲͲ ΫͳʹͳǤͷ500 Longitude Coordinates 173 USA, California, Siskiyou Co. J. D. Jokerst 1823. 5/7/1983. (CHICO38999) Canada, Alberta, Snow Creek Pass, A. E. Porsild 22673. 29/7/1960. (CAN266077) USA, California, Butte Co., J. Starr 10S054 & T. Villaverde. 6/8/2010. (CAN) USA, California, Butte Co., J. Starr 06018 & J. Thibeault. 3/8/2006. (CAN) USA, California, Tehama Co., Yellow Pine Forest. L. Ahart 94326. 19/7/2006. (CHSC-94326) USA, California, Sierra Co., Anderson Mdw. R. K. Gierischerisch 3493 & D. Esplin. 25/6/1969. (COLO-246761) USA, California, Butte Co. J. Starr 10S054 & T. Villaverde. 6/8/2010. (CAN) USA, California, Sierra Nevada Co. W.A. Nisbet 45. 20/7/1957. (CAN-272091) USA, California, Sierra Co. H. Oswald 8221 & L. Ahart. 19/8/1996. (CHSC66824) USA, California, Nevada Co. R. Naczi 11420. 3/8/2006. (US-3534689) USA, California, Nevada Co. R. Naczi 11420. 3/8/2006. (CHICO-99406) Voucher arctogena B arctogena B arctogena B arctogena B arctogena B — KP984464 — — — — — arctogena B — — — arctogena B ITS KP984467 arctogena B arctogena B arctogena B arctogena B Clade — — KP996329 KP996343 KP996322 KP996333 KP996320 KP996319 KP996323 KP996347 — atpF–atpH KP996358 KP996359 KP996418 KP996432 KP996411 KP996422 KP996409 KP996408 KP996412 KP996436 — matK GenBank accession numbers KP996443 — KP996468 — KP996464 — KP996463 KP996462 KP996465 KP996481 KP996482 rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena CAL 59 CAL 60 CAL 61 COL 39 COL 40 COL 41 COL 42 C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena CAL 55 CAL 57 CAL 58 Pop. code C. arctogena Species 38.02547 38.02547 39.80700 39.83400 34.49900 ΫͳͲǤͷͻͻʹ ΫͳͲǤͷͻͻʹ ΫͳͲͷǤͳͲͲͲ ΫͳͲͷǤͺͲͲ ΫͳͳͺǤʹͶͺͲͲ ΫͳͳͻǤʹͳͶͲͲ ΫͳͳͻǤʹͳͶͲͲ 37.92100 37.92200 ΫͳͳͺǤͶ͵ͲͲ ΫͳͳͺǤͲͶͳ ΫͳʹͳǤͷͷͲͲͲ Longitude 36.65800 38.79167 40.07700 Latitude Coordinates 174 USA, California, Butte Co. L. P. Janeway 3111. 29/7/1988. (CHICO-44118) USA, California, El Dorado Co. J. Pykäla et al. s.n. 23/7/1987. (H-15/2009N6) USA, California, Tulare Co. S. Brush & J. Oliphant 155. 24/8/1991. (CAS857890) USA, California, Mono Co., Mt. Dana Plateau. D. Taylor 7550. 25/7/1979. (COLO-330874) USA, California, Mono Co., Mt. Dana Plateau. D. Taylor 7550, 25/7/1979. (COLO-330874) USA, California, Tulare Co., Sierra Nevada. J. T. Howell s.n. 5/8/1949. (DAO-257423) USA, Colorado, Clear Creek Co. W. A. Weber et al. s.n. 8/8/1972. (CAN374041) USA, Colorado, Clear Creek Co., Bill Moore Lake. N. Lederer s.n. 31/8/1993. (COLO-00263731) USA, Colorado, Hinsdale Co., Gunnison National Forest. J. Starr 10S-033 & T. Villaverde. 26/7/2010. (CAN) USA, Colorado, Hinsdale Co., Gunnison National Forest. J. Starr 10S-033 & T. Villaverde. 26/7/2010. (CAN) Voucher arctogena B arctogena B arctogena B arctogena B — — — — — — arctogena B — KP984468 — arctogena B ITS KP984463 arctogena B arctogena B arctogena B arctogena B Clade KP996337 KP996338 KP996330 KP996346 KP996328 KP996327 KP996326 — — — atpF–atpH KP996426 KP996427 KP996419 KP996435 KP996417 KP996416 KP996415 KP996360 — KP996357 matK GenBank accession numbers KP996474 KP996475 KP996469 KP996480 — — — KP996444 — KP996442 rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena COL 43 COL 44 MNT 33 MNT 34 MNT 35 NEV 38 ORE 27 ORE 28 C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena Pop. code C. arctogena Species 44.11400 44.11467 40.81100 44.97142 45.03203 45.05800 39.26528 39.26528 Latitude ΫͳʹͳǤʹʹͲͲ ΫͳʹͲǤ͵ͷͻͶ ΫͳͳͲǤ͵͵ͳͲͲ ΫͳͲͺǤͷͻʹͺ ΫͳͲͺǤͷͳͶͻ ΫͳͲͻǤͶͲͲ ΫͳͲͷǤͷʹͲ ΫͳͲͷǤͷʹͲ Longitude Coordinates 175 USA, Colorado, Lake Co., San Isabel National Forest. J. Starr 10S-030 & T. Villaverde. 25/7/2010. (CAN) USA, Colorado, Lake Co., San Isabel National Forest. J. Starr 10S-030 & T. Villaverde. 25/7/2010. (CAN) USA, Montana, Carbon Co. H. Lackshewitz 7790. 11/8/1977. (WTU288770) USA, Montana, Carbon Co., Custer National Forest J. Starr 10S-047A & T. Villaverde. 31/7/2010. (CAN) USA, Wyoming, Park Co. J. Starr 10S047B & T. Villaverde. 31/7/2010. (CAN) USA, Utah, Duchesne Co., Uinta Mountains. E. Lewis 512. 15/8/1955. (CAN-515168) USA, Oregon, Deschutes Co., Deschustes National Forest. J. Starr 10S-057 & T. Villaverde. 9/8/2010. (CAN) USA, Oregon, Deschutes Co. C. Halpern 159046 & T. Magee. 30/8/1982. (OSC159046) Voucher arctogena B arctogena B arctogena B arctogena B arctogena B arctogena B arctogena B arctogena B Clade — — — — — — — — ITS KP996321 KP996325 KP996344 KP996340 KP996339 KP996334 KP996336 KP996335 atpF–atpH KP996410 KP996414 KP996433 KP996429 KP996428 KP996423 KP996425 KP996424 matK GenBank accession numbers — KP996467 KP996479 — KP996476 — KP996473 KP996472 rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena UTA 36 NEV 37 NWH 22 WAS 31 WAS 32 WYO 29 MAG 1 MAG 2 C. arctogena C. arctogena C. arctogena C. arctogena C. arctogena C. capitata C. capitata C. arctogena ORE 50 Pop. code C. arctogena Species 68.00000 66.00000 45.05200 48.84233 48.84233 42.27083 39.38800 40.77800 44.11467 Latitude 167.00000 171.00000 ΫͳͲͻǤͷͶͲͲ ΫͳʹͲǤͳͶʹʹͷ ΫͳʹͲǤͳͶʹʹͷ ΫͳǤ͵ͲͷͷͲ ΫͳͳͻǤͻʹͲͲ ΫͳͳͲǤʹ͵ͲͲ ΫͳʹͲǤ͵ͷͻͶ Longitude Coordinates 176 USA, Utah, Duchesne Co., Gilbert Creek. A. Huber 440 & S. Goodrich. 25/8/1993. (BRY-368578) USA, Nevada, Washoe Co. M. E. Lewis 448. 17/7/1955. (CAN-550536) USA, New Hampshire, Alpine Garden, Mt. Washington. W. W. Eggleston 1681. 29/7/1989. (RM-23379) USA, Washington, Whatcom Co. J. Starr 10S-061 & T. Villaverde. 11/8/2010. (CAN) USA, Washington, Whatcom Co. J. Starr 10S-061 & T. Villaverde. 11/8/2010. (CAN) USA, Wyoming, Park Co., Beartooth Plateau. B. Neely s.n. 18/8/1984. (COLO-399492) Russia, Chukotski Peninsula. U. P. Kozhevnikov et al. s.n. 27/7/1970. (DAO-139887) Russia, Chukotka, Anui upland region. E. V. Zimarskaja et al. s.n. 12/7/1967. (DAO-139880) USA, Oregon, Deschutes Co., Deschustes National Forest. J. Starr 10S-057 & T. Villaverde. 9/8/2010. (CAN) Voucher capitata A capitata A arctogena B arctogena B arctogena B arctogena B arctogena B arctogena B arctogena B Clade — — — — — — — — — ITS KP996308 KP996304 KP996332 KP996341 KP996342 — KP996345 KP996331 KP996324 atpF–atpH KP996397 KP996393 KP996421 KP996430 KP996431 KP996373 KP996434 KP996420 KP996413 matK GenBank accession numbers — — KP996471 KP996477 KP996478 — — KP996470 KP996466 rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena MAG 3 YAK 4 ALB 19 ASK 23 BRC 21 BRC 22 FIN 7 FIN 8 FIN 9 ICE 15 C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata Pop. code C. capitata Species 65.14400 66.36700 66.36700 69.08800 52.46667 52.46667 68.06300 58.98333 69.41667 68.00000 Latitude ΫͳͶǤ͵ͻͶͲͲ 29.53300 29.53300 21.92800 ΫͳʹͶǤͺ͵͵͵ ΫͳʹͶǤͺ͵͵͵ ΫͳͶͷǤͲͻ͵ͲͲ ΫͳͳͲǤͳ 130.66667 167.00000 Longitude Coordinates 177 Russia, Sakha Republic, Bulnsk region. B. Yurtsev s.n. 25/6/1960. (DAO257437) Canada, Alberta, Ft. Fitzgerald. W. J. Cody 4533 & C. C. Loan. 19/7/1950. (RM-228683) USA, Alaska, Old John Lake Area. K. Holmen 61-1227. 13/7/1961. (CAN271116) Canada, British Columbia, Anahim Lake. J. Calder 18578 et al. s.n. 9/7/1956. (COLO-158463) Canada, British Columbia, Anahim Lake. J. Calder 18578. J. A. Parmelee & R. L. Taylor s.n. 9/7/1956. (WTU197744) Finland, Enontekiö lapland. H. Väre 11515. 29/7/2001. (H-737814) Finland, Kuusamo, Liikasenvaara. T. Ulvinen s.n. 9/8/1962. (CAN-276804) Finland,Kuusamo, Liikasenvaara. T. Ulvinen s.n. 9/8/1962. (CAN-276804) Iceland, Hallormsstadhur. H. F. Gotzsche HFG81-37. 22/7/1981. (C15/2009) Russia, Western Chukotka. E. V. Zimarskaja et al. s.n. 12/7/1967. (BRY-122530) Voucher capitata B capitata B capitata B capitata B capitata B capitata B ITS KP984472 — — KP984470 — — — — capitata B capitata B — — capitata A capitata A Clade — KP996305 KP996316 — KP996307 KP996301 KP996312 KP996300 KP996352 KP996310 atpF–atpH — KP996394 KP996405 — KP996396 KP996390 KP996401 KP996389 — KP996399 matK GenBank accession numbers — — KP996460 — — — KP996456 — — — rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena ICE 17 ICE 18 MAG 5 MAN 23 MAN 24 MAN 25 MAN 26 MAN 27 MAN 29 C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata ICE 16 Pop. code C. capitata Species 58.75500 58.63700 57.83000 58.75500 58.74700 58.63500 62.20000 65.65700 66.00000 66.05000 Latitude ΫͻͶǤͲͺͲͲ Ϋͻ͵ǤͺʹͲͲ ΫͻʹǤͺͲͶ͵Ͳ ΫͻͶǤͲͺͲͲ ΫͻͶǤͳͷͲͲ -94.13000 33.78333 ΫͳǤͺͳͷͲͲ ΫͳͺǤ͵ͺ͵ͲͲ Ϋʹ͵Ǥͳ͵͵ͲͲ Longitude Coordinates 178 Iceland, Hrísey, Eyjafirði. A. Garðarsson s.n. 12/8/1967. (ICEL04078) Iceland, Dalfjall, Mývatnssvei. E. Einarsson s.n. 21/8/1974. (ICEL04073) Russia, Magadan region, North Even area. A.P. Hohrjakov s.n. 2/8/1976. (CAN- 455497) Canada, Manitoba, Churchill, south of Fort. K. Johnson J73-402. 26/8/1973. (WIN-33557) Canada, Manitoba, Fort Churchill. J. Shay 83-60. 11/7/1983. (WIN-40808) Canada, Manitoba, Fort Churchill. J. Ritchie 2104. 5/8/1956. (WIN-22433) Canada, Manitoba, Wapusk National Park. E. Punter 03-509 & M. PierceyNormore. 19/7/2003. (WIN-71429) Canada, Manitoba, Twin Lakes. A. Ford 02379 et al. 25/7/2002. (WIN-71024) Canada, Manitoba, Fort Churchill. J. Ritchie 2104. 5/8/1956. (CAN248387) Iceland, Lagarfoss, Hróarstungu, Lagarfljótsrannsóknir s.n. 26/6/1976. (ICEL-04081) Voucher capitata B capitata B capitata B capitata B capitata B capitata B — — — — — — — — capitata B capitata B — — capitata B capitata B Clade ITS KP996313 KP996297 KP996296 KP996294 KP996292 — KP996314 KP996299 KP996298 KP996306 atpF–atpH KP996402 KP996385 KP996384 KP996382 KP996380 KP996387 KP996403 KP996388 KP996386 KP996395 matK GenBank accession numbers KP996457 — — — — — KP996458 — — — rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena NOR 14 NWT 35 NWT 36 ONT 30 ONT 31 RUN 6 SAS 37 SWE 10 SWE 11 C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata C. capitata MAN 30 Pop. code C. capitata Species 63.18100 68.32700 54.06667 62.20000 55.98000 55.13420 67.33333 65.71700 60.07900 58.76667 Latitude 14.75100 18.83800 ΫͳͲͶǤͲͷͻͶͶ 33.78333 ΫͺǤͶͶͲͲ ΫͺʹǤ͵ͳʹͺͲ ΫͳʹͷǤͷͺ͵͵͵ ΫͳͳͺǤͺ͵͵ͲͲ 10.03300 Ϋͻ͵Ǥͺ͵333 Longitude Coordinates 179 Norway, Folldal Gammelsetran. M. Vileid s.n. 18/8/1998. (O-235091) Canada, Northwest Territories, Sawmill Bay. H. T. Shacklette 2970. 13/7/1948. (CAN-199991) Canada, Northwest Territories, Aubry Lake. R. Riewe 225 & M. G. Marsh. 17/7/1976. (CAN-433230) Canada, Ontario, Kenora District. J. L. Riley 5848. 23/8/1976. (CAN409561) Canada, Ontario, Fort Severn. I. Hustich 1296. 13/7/1956. (CAN242845) Russia, Karelia Republic. Ruuhijävi 4002. 9/7/2002. (H-744530) Canada, Saskatchewan, Waskesim. J. Hudson 5063. 31/7/1992. (CAN565528) Sweden, Torne, Gemeinde Kiruna. H. Hertel 22918. 8/8/1980. (M0151931) Sweden, Jämtland, Paroecia Frösö. E. Asplund s.n. 2/6/1925. (C15-2009N2) Canada, Manitoba, vicinity of Churchill. W. Schofield 6862 & H. Crum. 21/7/1956. (CAN-247332) Voucher capitata B capitata B capitata B capitata B capitata B capitata B capitata B capitata B capitata B capitata B Clade KP984476 KP984477 — — — — — — KP984473 — ITS — — KP996311 KP996309 KP996351 KP996302 KP996318 KP996291 — KP996315 atpF–atpH — — KP996400 KP996398 — KP996391 KP996407 KP996379 — KP996404 matK GenBank accession numbers — — KP996455 — — — KP996461 — — KP996459 rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena YUK 32 YUK 33 YUK 34 KEN 1 KEN 2 TUR WYO 1 C. capitata C. capitata C. capitata C. monostachya C. monostachya C. oreophila C. obtusata C. capitata SWE 12 SWE 13 Pop. code C. capitata Species 44.98930 37.75100 ΫͲǤͳͷͳ ΫͲǤͳʹͷ 61.86667 64.36700 64.36700 68.56667 68.56667 Latitude ΫͳͳͲǤ 44.31600 37.24197 37.20828 Ϋͳ͵ͷǤͺͺ͵͵͵ Ϋͳ͵ǤʹͲͲ Ϋͳ͵ǤʹͲͲ 18.34167 19.50000 Longitude Coordinates 180 Canada, Yukon Territory, Dempster Highway. R. Porsild 1593. 17/7/1968. (CAN-318505) Canada, Yukon, Ogilvie Mountains. A. E. Porsild 1462 & R. Porsild. 28/6/1968. (CAN-318349) Canada, Yukon, Dawson. J. Calder 25796 & J. Gillett. 22/6/1960. (ALA43436) Kenya, Mt. Kenya National Park. Naro Moru route. M. L. Buide 114UPO-K. 28/7/2007. (UPOS3304-111) Kenya, Mt. Kenya National Park, Naro Moru route. M. L. Buide 114UPO-K. 28/7/2007. (UPOS3306-462) Turkey. Hakkari Province, Kara Dag. Davis & Polunim 24438. 16/8/1954. (E-00353688) USA, Wyoming, Park Co., Yellowstone National Park. E. F. Evert 38901. 9/7/2001. (MOR0060897-164295) Sweden, Soland, Torne. C. G. Alm s.n. 9/8/1958. (V-539346) Sweden, Torne Lappmark, Abisko. G. Alm s.n. 6/8/1958. (H-1226056) Voucher Outgroup oreophila monostachya KP984459 KP984462 — — — capitata B — — — monostachya ITS KP984475 capitata B capitata B capitata B capitata B Clade KP996270 — KP996273 KP996274 KP996295 KP996317 KP996293 KP996303 — atpF–atpH — — — — KP996383 KP996406 KP996381 KP996392 — matK GenBank accession numbers KP996437 KP996441 — KP996440 — — — — — rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena WYO 2 WYO 3 SPA KEN ARG C. obtusata C. rupestris C. runssoroensis Uncinia triquetra Pop. code C. obtusata Species Ϋͷ͵ǤͳͷͻͷͲ ΫͲǤͳ͵͵ͻ 42.68350 43.77250 43.81930 Latitude ΫͳǤͳͳͲ 37.23439 0.07240 ΫͳͲͻǤͳͻͺͷͲ ΫͳͲͻǤͲ͵͵ Longitude Coordinates 181 Spain, Huesca, Parque Nacional de Ordesa y Monte Perdido. M. L. Buide 57MBR04 & J. M. Marín. 30/7/2004. (UPOS-168) Kenya, Mt. Kenya National Park, Naro Moru route. M. L. Buide et al. 113UPOK. 28/7/2007.(UPOS3305-461) Chile, Punta Arenas, Reserva forestal de Magallanes. M. Luceño 185ML05 & R. Álvarez. 28/12/2005. (UPOS-1803) USA, Wyoming, Hot Springs Co., Shoshone National. Forest. E. Evert 39259. 2/7/2002. (MOR-0060899162917) USA, Wyoming, Hot Springs Co., Absaroka Mountains. E. Evert 38141. 29/6/2000. (MOR-0060898-161081) Voucher Outgroup runssoroensis Outgroup Outgroup Outgroup Clade — — — KP984461 KP984460 ITS KP996268 KP996275 KP996269 KP996272 KP996271 atpF–atpH KP996355 — KP996356 — — matK GenBank accession numbers — — — KP996439 KP996438 rps16 ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena Total number of sequences in the alignment Aligned length (bp) Ungapped length range Identical sites Pairwise identity Variable characters Parsimony-informative characters Number of informative indels Mean G+C content Substitution model References Description of regions Primers atpF / atpH matk 2.1f_J /matk 5r_J rps16F / rps16R 1 13 47.90% 27.90% HKY+I (ITS 1)/ JC HKY (5.8S)/ GTR (ITS 2) 605 516–601 579 (97.7%) 99.30% 17 14 628 616–624 571 (91.8%) 64.50% 51 36 182 28.90% HKY+I 0 746 693–746 722 (96.8%) 99.50% 21 12 27.10% GTR 0 856 643–856 833 (97.3%) 99.50% 34 14 Intergenic spacer Internal transcribed Intergenic spacer Chloroplast gene of a maturase protein of chloroplast spacers 1 and 2 and of chloroplast region 5.8S ribosomal RNA region White (1990) and Fazekas et al. Plant Working Group, Royal Botanical Gardens Shaw et al. Blattner (1999) (2008) Kew, http://www.kew.org/barcoding/protoc (2005) ols.html, modified by Chouinard (2010) 19 87 89 49 ITS-4 / ITS-A Table S2 Characteristics of the DNA regions sequenced for complete datasets including all species in Carex sections Capituligerae and Longespicatae and outgroups. ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena Table S3 Locus information for the regions amplified in the study including samples sizes, summary statistics. Nh, number of haplotypes (gaps were excluded); Hd, haplotype diversity; SǡǢɎǡucleotide diversity. Locus atpF–atpH rps16 matK Nh 5 4 6 Hd S 0.725 0.729 0.746 8 4 8 Ɏ 0.00442 0.00245 0.00397 Tajima’s D Fu & Li’s D* 1.27151n.s. 1.63220n.s. 1.85050n.s. 1.27758n.s. 1.01718n.s. 1.28088n.s. Fu & Li’s F* 1.50645n.s. 1.40374n.s. 1.73597* *P < 0.05; n.s., not significant. Table S4 Average within-group nucleotide substitution estimates for the matK gene of the complete dataset. dS, number of synonymous sites; dN, number of non-synonymous sites. Selection hypothesis tested Species Outgroups C. monostachya and C. runssoroensis C. capitata A C. capitata B C. arctogena A C. arctogena B Neutrality Positive Purifying Probability ΫdN Probability dSΫdN Probability dSΫdN 0.508n.s. 0.040* ΫͲǤͶ 2.081 1.000n.s. 0.019* ΫͲǤ 2.106 0.252n.s. 1.000n.s. 0.670 ΫʹǤͲͻ͵ 1.000n.s. 0.304n.s. 1.000n.s. 0.297n.s. 0 .000 1.031 0.000 ΫͳǤͲͶͺ 1.000n.s. 0.154n.s. 1.000n.s. 0.150n.s. 0.000 1.022 0.000 1.039 1.000n.s. 1.000n.s. 1.000n.s. 1.000n.s. 0.000 ΫͳǤͲ͵ͺ 0.000 ΫͳǤͲ͵Ͳ *P < 0.05; n.s., not significant. 183 PC1 PC2 PC3 bio1 ΫͲǤʹͺ ΫͲǤʹͳͻ ΫͲǤͲͻ bio2 ΫͲǤͳͳͲ ΫͲǤʹͻͶ 0.187 bio3 ΫͲǤ͵Ͳͺ ΫͲǤͲͻ͵ ΫͲǤͲʹ bio4 0.328 0.009 0.209 bio5 ΫͲǤͲͻ ΫͲǤ͵ͷ 0.209 bio6 ΫͲǤ͵ʹʹ ΫͲǤͳͲͷ ΫͲǤͳ͵ bio7 0.293 ΫͲǤͲͷ 0.277 bio8 0.152 0.008 0.125 bio9 ΫͲǤʹͻͺ ΫͲǤͳͻͲ ΫͲǤͲͻ bio10 ΫͲǤͲͶ ΫͲǤ͵Ͷ 0.150 bio11 ΫͲǤ͵ʹ͵ ΫͲǤͳ͵ʹ ΫͲǤͳ͵ͻ bio12 ΫͲǤʹͶͶ 0.252 0.265 bio13 ΫͲǤʹ͵ͳ 0.178 0.378 bio14 ΫͲǤͳͷͲ 0.351 ΫͲǤͳͲͳ bio15 0.014 ΫͲǤͳͳ 0.496 bio16 ΫͲǤʹ͵ͳ 0.172 0.384 bio17 ΫͲǤͳͺʹ 0.344 ΫͲǤͲ͵Ͷ bio18 ΫͲǤͲͶ 0.346 0.141 bio19 ΫͲǤʹͷͶ 0.048 0.244 % of 41.900% 26.940% 14.340% variance Variable 0.217 ΫͲǤͲ͵ 0.093 ΫͲǤͲͳͺ 0.157 0.083 ΫͲǤͲͲͺ 0.658 ΫͲǤͳʹͳ 0.308 0.107 ΫͲǤͲͲͻ 0.005 0.101 ΫͲǤͲͻͷ ΫͲǤͲͶ 0.120 0.420 ΫͲǤ͵ͺͳ 7.699% PC4 ΫͲǤͲͷʹ 0.570 0.053 0.113 0.273 ΫͲǤͳ͵ 0.297 ΫͲǤʹͺ 0.031 0.072 ΫͲǤͲͺͲ 0.028 ΫͲǤͳͳ 0.340 ΫͲǤ͵͵Ͷ ΫͲǤͳͲ 0.318 0.127 ΫͲǤͲͷͲ 4.640% PC5 ΫͲǤͳͶͷ 0.339 0.601 ΫͲǤͳͳʹ ΫͲǤͳͻͶ ΫͲǤͲͷͶ ΫͲǤͲ͵ͻ ΫͲǤͲ͵͵ ΫͲǤͲ͵ ΫͲǤͶͲͳ ΫͲǤͲʹͷ ΫͲǤͳͲͶ 0.064 ΫͲǤʹͳͲ 0.230 ΫͲǤͲʹͷ ΫͲǤͲͻ͵ 0.179 ΫͲǤ͵Ͳ 2.338% PC6 ΫͲǤͲͻͳ 0.330 0.083 ΫͲǤͲͷͻ ΫͲǤͳͲͳ ΫͲǤͲͷ͵ 0.004 0.580 ΫͲǤͲʹ ΫͲǤʹʹͻ ΫͲǤͲͳͷ 0.069 ΫͲǤͲʹͺ ΫͲǤͳͳͷ ΫͲǤͶͲ͵ 0.056 ΫͲǤͲͺʹ ΫͲ.285 0.441 0.915% PC7 ΫͲǤͳͻͳ 0.076 ΫͲǤͲͳ 0.035 ΫͲǤͲʹ 0.014 ΫͲǤͲͶͻ 0.317 0.499 ΫͲǤͳͲ͵ ΫͲǤͲͶ ΫͲǤͳͳʹ ΫͲǤͳ 0.405 0.501 ΫͲǤʹͳͻ 0.231 ΫͲǤͳͷ 0.044 0.511% PC8 184 ΫͲǤͳͲͷ ΫͲǤͲʹ ΫͲǤͳ͵ 0.071 ΫͲǤͲͲ ΫͲǤͳͲ 0.104 0.029 0.754 ΫͲǤͲͲ ΫͲǤͲͻͻ ΫͲǤͲͲ2 0.164 Ϋ0.290 ΫͲǤ͵Ͳͻ 0.137 ΫͲǤͳͷ 0.298 ΫͲǤͳʹ 0.312% PC9 ΫͲǤͳͳͲ ΫͲǤ͵ͺ 0.652 0.394 0.008 ΫͲǤͲͶ͵ 0.048 0.007 0.103 0.274 ΫͲǤʹʹʹ 0.058 0.062 0.053 ΫͲǤͳͷͻ ΫͲǤͲʹͳ 0.118 ΫͲǤʹ͵ 0.039 0.213% PC10 0.286 0.008 0.150 0.064 ΫͲǤ͵ͷͶ ΫͲǤʹͲ 0.038 ΫͲǤͲͷ 0.048 0.180 ΫͲǤͲ͵ 0.017 ΫͲǤͶͳͶ ΫͲǤͳ͵ 0.112 ΫͲǤʹͳͳ ΫͲǤͲͶͲ 0.463 0.467 0.063% PC11 ΫͲǤͷ͵ͳ ΫͲǤͲͷͺ 0.023 0.058 0.395 0.400 ΫͲǤʹͳͶ ΫͲ.020 ΫͲǤͲͻͳ ΫͲǤͲʹ ΫͲǤͲʹ ΫͲǤͳͷʹ ΫͲǤͳͲͶ ΫͲǤʹʹ 0.001 ΫͲǤͳͶ͵ 0.174 0.323 0.286 0.053% PC12 0.062 0.045 ΫͲǤͳʹͶ ΫͲ.007 ΫͲǤͳͳ͵ ΫͲǤͲͷ 0.003 0.018 0.028 0.033 0.045 0.359 ΫͲǤͲͻͲ ΫͲǤͷͷͺ 0.063 ΫͲǤͳͳ 0.646 ΫͲǤʹͲ ΫͲǤͳͺͳ 0.031% PC13 ΫͲǤͲʹͻ 0.145 ΫͲǤͲͺͲ 0.021 ΫͲǤ͵ʹ ΫͲǤͲͺͶ ΫͲǤͲ͵ ΫͲǤͲʹͷ ΫͲǤͲͶͷ 0.282 0.080 ΫͲǤͷͺ 0.575 ΫͲǤͲʹ ΫͲǤͲͶ ΫͲǤͳ 0.236 ΫͲǤͲͲͶ 0.124 0.017% PC14 0.377 ΫͲǤ͵ͳ 0.105 ΫͲǤͳʹ 0.379 ΫͲǤͳͲ 0.347 0.044 0.007 ΫͲǤͶͷʹ ΫͲǤͲͲ ΫͲǤ͵͵ 0.083 ΫͲǤͲͳ 0.035 ΫͲǤͲͷ 0.253 0.008 0.176 0.015% PC15 ΫͲǤͲͳͻ ΫͲǤͲͷ͵ 0.000 ΫͲǤͲͷͳ 0.100 ΫͲǤͲʹͻ 0.078 ΫͲǤͲͲͳ ΫͲǤͲͲͳ ΫͲǤͲͺͳ 0.072 0.430 0.391 0.044 ΫͲǤͲͲ͵ ΫͲǤͷʹ ΫͲǤʹ͵ͷ 0.042 0.054 0.010% PC16 0.464 0.185 ΫͲǤͳͳʹ 0.447 0.021 0.331 ΫͲǤ͵ʹ ΫͲǤͲͲͶ ΫͲǤͲͲͷ ΫͲǤʹ͵ ΫͲǤͶͻ ΫͲǤͲͳ͵ 0.115 ΫͲǤͲͳ͵ ΫͲǤͲͲͳ ΫͲǤͲͳ 0.006 0.018 ΫͲǤͲʹʹ 0.003% PC17 PC19 0.033 0.000 0.009 0.000 ΫͲǤͲͳͻ 0.000 0.650 0.000 ΫͲǤͲͳ ΫͲǤ͵ʹ͵ ΫͲǤͲͳͳ 0.674 0.003 0.665 ΫͲǤͲͲ͵ 0.000 ΫͲǤͲͲʹ 0.000 ΫͲǤʹ͵ͻ 0.000 0.718 0.000 ΫͲǤͲͳͺ 0.000 ΫͲǤͲʹʹ 0.000 0.006 0.000 ΫͲǤͲͲ͵ 0.000 0.032 0.000 ΫͲǤͲͳ 0.000 0.025 0.000 0.000 0.000 0.001% 0.000% PC18 Table S5 Loadings matrix obtained by the principal components analysis not corrected by phylogeny of 19 bioclimatic variables on Carex sections Capituligerae and Longespicatae. ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena PC1 Ϋ0.286 Ϋ0.110 Ϋ0.308 0.328 Ϋ0.069 Ϋ0.322 0.293 0.152 Ϋ0.298 Ϋ0.064 Ϋ0.323 Ϋ0.244 Ϋ0.231 Ϋ0.150 0.014 Ϋ0.231 Ϋ0.182 Ϋ0.046 Ϋ0.254 98.993% Variables bio1 bio2 bio3 bio4 bio5 bio6 bio7 bio8 bio9 bio10 bio11 bio12 bio13 bio14 bio15 bio16 bio17 bio18 bio19 % of variance Ϋ0.219 Ϋ0.294 Ϋ0.093 0.009 Ϋ0.375 Ϋ0.105 Ϋ0.075 0.008 Ϋ0.190 Ϋ0.364 Ϋ0.132 0.252 0.178 0.351 Ϋ0.161 0.172 0.344 0.346 0.048 0.786% PC2 Ϋ0.069 0.187 Ϋ0.027 0.209 0.209 Ϋ0.173 0.277 0.125 Ϋ0.097 0.150 Ϋ0.139 0.265 0.378 Ϋ0.101 0.496 0.384 Ϋ0.034 0.141 0.244 0.126% PC3 0.217 Ϋ0.037 0.093 Ϋ0.018 0.157 0.083 Ϋ0.008 0.658 Ϋ0.121 0.308 0.107 Ϋ0.009 0.005 0.101 Ϋ0.095 Ϋ0.046 0.120 0.420 Ϋ0.381 0.052% PC4 Ϋ0.052 0.570 0.053 0.113 0.273 Ϋ0.163 0.297 Ϋ0.286 0.031 0.072 Ϋ0.080 0.028 Ϋ0.117 0.340 Ϋ0.334 Ϋ0.107 0.318 0.127 Ϋ0.050 0.023% PC5 Ϋ0.145 0.339 0.601 Ϋ0.112 Ϋ0.194 Ϋ0.054 Ϋ0.039 Ϋ0.033 Ϋ0.063 Ϋ0.401 Ϋ0.025 Ϋ0.104 0.064 Ϋ0.210 0.230 Ϋ0.025 Ϋ0.093 0.179 Ϋ0.360 0.008% PC6 Ϋ0.091 0.330 0.083 Ϋ0.059 Ϋ0.101 Ϋ0.053 0.004 0.580 Ϋ0.062 Ϋ0.229 Ϋ0.015 0.069 Ϋ0.028 Ϋ0.115 Ϋ0.403 0.056 Ϋ0.082 Ϋ0.285 0.441 0.006% PC7 Ϋ0.191 0.076 Ϋ0.061 0.035 Ϋ0.072 0.014 Ϋ0.049 0.317 0.499 Ϋ0.103 Ϋ0.047 Ϋ0.112 Ϋ0.166 0.405 0.501 Ϋ0.219 0.231 Ϋ0.156 0.044 0.004% PC8 185 Ϋ0.105 Ϋ0.062 Ϋ0.136 0.071 Ϋ0.007 Ϋ0.106 0.104 0.029 0.754 Ϋ0.070 Ϋ0.099 Ϋ0.002 0.164 Ϋ0.290 Ϋ0.309 0.137 Ϋ0.156 0.298 Ϋ0.127 0.001% PC9 Ϋ0.110 Ϋ0.378 0.652 0.394 0.008 Ϋ0.043 0.048 0.007 0.103 0.274 Ϋ0.222 0.058 0.062 0.053 Ϋ0.159 Ϋ0.021 0.118 Ϋ0.273 0.039 0.000% PC10 0.286 0.008 0.150 0.064 Ϋ0.354 Ϋ0.207 0.038 Ϋ0.065 0.048 0.180 Ϋ0.037 0.017 Ϋ0.414 Ϋ0.136 0.112 Ϋ0.211 Ϋ0.040 0.463 0.467 0.000% PC11 Ϋ0.531 Ϋ0.058 0.023 0.058 0.395 0.400 Ϋ0.214 Ϋ0.020 Ϋ0.091 Ϋ0.027 Ϋ0.026 Ϋ0.152 Ϋ0.104 Ϋ0.262 0.001 Ϋ0.143 0.174 0.323 0.286 0.000% PC12 0.062 0.045 Ϋ0.124 Ϋ0.007 Ϋ0.113 Ϋ0.057 0.003 0.018 0.028 0.033 0.045 0.359 Ϋ0.090 Ϋ0.558 0.063 Ϋ0.117 0.646 Ϋ0.207 Ϋ0.181 0.000% PC13 Ϋ0.029 0.145 Ϋ0.080 0.021 Ϋ0.327 Ϋ0.084 Ϋ0.073 Ϋ0.025 Ϋ0.045 0.282 0.080 Ϋ0.568 0.575 Ϋ0.072 Ϋ0.046 Ϋ0.176 0.236 Ϋ0.004 0.124 0.000% PC14 0.377 Ϋ0.316 0.105 Ϋ0.162 0.379 Ϋ0.160 0.347 0.044 0.007 Ϋ0.452 Ϋ0.006 Ϋ0.337 0.083 Ϋ0.071 0.035 Ϋ0.056 0.253 0.008 0.176 0.000% PC15 Ϋ0.019 Ϋ0.053 0.000 Ϋ0.051 0.100 Ϋ0.029 0.078 Ϋ0.001 Ϋ0.001 Ϋ0.081 0.072 0.430 0.391 0.044 Ϋ0.003 Ϋ0.752 Ϋ0.235 0.042 0.054 0.000% PC16 0.464 0.185 Ϋ0.112 0.447 0.021 0.331 Ϋ0.326 Ϋ0.004 Ϋ0.005 Ϋ0.236 Ϋ0.497 Ϋ0.013 0.115 Ϋ0.013 Ϋ0.001 Ϋ0.071 0.006 0.018 Ϋ0.022 0.000% PC17 PC19 0.033 0.000 0.009 0.000 Ϋ0.019 0.000 0.650 0.000 Ϋ0.017 Ϋ0.323 Ϋ0.011 0.674 0.003 0.665 Ϋ0.003 0.000 Ϋ0.002 0.000 Ϋ0.239 0.000 0.718 0.000 Ϋ0.018 0.000 Ϋ0.022 0.000 0.006 0.000 Ϋ0.003 0.000 0.032 0.000 Ϋ0.016 0.000 0.025 0.000 0.000 0.000 0.000% 0.000% PC18 Table S6 Loadings matrix obtained by the principal components analysis corrected by phylogeny of 19 bioclimatic variables on Carex sections Capituligerae and Longespicatae. ________________________________________________________________ Chapter 3. Direct long-distance dispersal best explains ________________________________________________________________ the bipolar distribution of Carex arctogena ________________________________________________________________ Chapter 3. Direct long-distance ________________________________________________________________ dispersal best explains the bipolar distribution of Carex arctogena Table S7 Bioclimatic variables used. Units of bioclimatic variables are °C × 10 for temperature (excluding BIO4, which was calculated based on K × 10 to deal with negative temperatures) and mm for precipitation. Bioclimatic variable BIO1 BIO2 BIO3 BIO4 BIO5 BIO6 BIO7 BIO8 BIO9 BIO10 BIO11 BIO12 BIO13 BIO14 BIO15 BIO16 BIO17 BIO18 BIO19 Description annual mean temperature mean diurnal temperature range [mean of monthly (maximum temperature Ϋ minimum temperature)] isothermality (BIO2 / BIO7 × 100) temperature seasonality (standard deviation of monthly temperature) maximum temperature of the coldest month minimum temperature of the warmest month temperature range (BIO6 Ϋ BIO5) mean temperature of the wettest quarter mean temperature of the driest quarter mean temperature of the warmest quarter mean temperature of the coldest quarter annual precipitation precipitation of the wettest month precipitation of the driest month precipitation seasonality (coefficient of variation of monthly precipitation) precipitation of the wettest quarter precipitation of the driest quarter precipitation of the warmest quarter precipitation of the coldest quarter REFERENCES Blattner, F.R. (1999) Direct amplification of the entire ITS region from poorly preserved plant material using recombinant PCR. Biotechniques, 27, 1180–1186. Brummitt, R.K. (2001) World geographical scheme for recording plant distributions, 2nd ed. Hunt Institute for Botanical Documentation, Pittsburgh, PA. Chouinard, B.N. (2010) DNA Barcodes for the Cariceae (Carex & Kobresia, Cyperaceae) of North America, north of Mexico. University of Ottawa, Ottawa, ON. Fazekas, A.J., Burgess, K.S., Kesanakurti, P.R., Graham, S.W., Newmaster, S.G., Husband, B.C., Percy, D.M., Hajibabaei, M. & Barrett, S.C.H. (2008) Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well. PLoS ONE, 3, 1–12. Shaw, J., Lickey, E.B., Beck, J.T., Farmer, S.B., Liu, W., Miller, J., Siripun, K.C., Winder, C.T., Schilling, E., & Small, R.L. (2005) The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis. American Journal of Botany, 92, 142–166. White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications (ed. by M. Innis, D. Gelfand, D. Sninsky and T. White), Academic Press. 186 Chapter 4 Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction of Carex maritima (Cyperaceae) 187 188 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima Journal of Biogeography (J. Biogeogr.) (2015) ORIGINAL ARTICLE Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction of Carex maritima (Cyperaceae) Tamara Villaverde1*, Marcial Escudero2, Modesto Luce~ no1 and 1 Santiago Martın-Bravo 1 Botany area, Department of Molecular Biology and Biochemical Engineering, Pablo de Olavide University, Seville, Spain, 2 Department of Integrative Ecology, Estacion Biologica de Do~ nana (EBD – CSIC), Seville, Spain ABSTRACT Aim We set out to explain the bipolar distribution of Carex maritima, clarifying the direction and timing of dispersal. We also tested mountain-hopping and direct long-distance dispersal hypotheses, as well as the relationship of C. maritima with biotic and abiotic factors that could explain the bipolar distribution. Location Arctic/boreal latitudes of both hemispheres. Methods Molecular and bioclimatic data were obtained for C. maritima and related species from section Foetidae. We sequenced two (rps16 and 50 trnK intron) plastid DNA regions (cpDNA) and the external and internal transcribed spacers (ETS and ITS) of the nuclear ribosomal gene region (nrDNA) and inferred phylogenetic relationships, divergence time estimates and biogeographical patterns using maximum likelihood, statistical parsimony, Bayesian inference and ecological niche modelling. Results Carex maritima populations from the Southern Hemisphere were genetically and ecologically differentiated from their northern counterparts and formed a monophyletic group nested within a paraphyletic C. maritima. Divergence time analysis estimated a middle–late Pleistocene divergence of the southern lineage (0.23 Ma; 95% highest posterior density: 0.03–0.51 Ma). Southern Hemisphere populations are more stenotopic than the Northern Hemisphere ones, which tolerate harsher conditions. *Correspondence: Tamara Villaverde, Botany area, Department of Molecular Biology and Biochemical Engineering, Pablo de Olavide University, ctra. de Utrera km 1 s/n, 41013 Seville, Spain. E-mail: tvilhid@gmail.com Main conclusions Our results point to a middle–late Pleistocene migration of C. maritima by long-distance dispersal, either directly or via mountain-hopping, from the Northern Hemisphere to the Southern Hemisphere. Keywords Biogeography, bipolar distribution, Carex, climatic niche, Cyperaceae, divergence time estimation, Foetidae, long-distance dispersal. INTRODUCTION Darwin (1872) studied some potential mechanisms underlying the disjunctions of arctic–alpine plant species to refute the idea of multiple creations (Gmelin, 1747) in favour of the hypothesis of a single origin and subsequent migrations. He compiled evidence about the time in which these plants could have initiated their migrations, together with the means and directions of colonization (e.g. seed survival in oceans or seed dispersal by birds), making use of data to explain the similarities between the floras of very distant ª 2015 John Wiley & Sons Ltd mountain ranges spread throughout the world. He invoked signs of an Ice Age in the high latitudes of the Northern Hemisphere to argue that these plants could have migrated southwards and descended from the mountain summits during the glacial epoch. As the climate subsequently warmed up in the high latitudes of the Northern Hemisphere, plants would have recolonized northwards, as well as moved to higher elevations in the mountainous regions of the lower latitudes of the Northern Hemisphere. When the Southern Hemisphere experienced a glacial period, these isolated populations would have been able to spread, in time reaching http://wileyonlinelibrary.com/journal/jbi doi:10.1111/jbi.12559 189 1 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima T. Villaverde et al. the scattered locations in the high latitudes of the Southern Hemisphere where they persist. Nearly a century and a half later, the ideas and hypotheses proposed by Darwin to explain bipolar disjunctions are still admired as having been well ahead of their time (Donoghue, 2011). Nowadays, a combination of bioclimatic and molecular data can help us to better assess the possible evolutionary, climatic and geological changes at the origin of the biogeographical patterns (Crisp et al., 2011). Historical biogeography has been dominated over the past few decades by investigations of shared distribution patterns among taxa (e.g. Sanmartın et al., 2001; Posadas et al., 2006). Organism distributions in the Southern Hemisphere, together with the underlying causes, have long been analysed (e.g. Raven, 1963; Raven & Axelrod, 1974; Wen & IckertBond, 2009; reviewed in Sanmartın & Ronquist, 2004). One of the most fascinating plant distribution patterns concerning the Southern Hemisphere encompasses the bipolar disjunction (> 55 N and > 52 S), achieved only by c. 30 vascular plant species (Moore & Chater, 1971). Four hypotheses have historically been put forward to account for bipolar disjunctions: (1) convergent or parallel evolution of the disjunct populations (Scotland, 2011); (2) vicariance (Du Rietz, 1940), which implies a continuous distribution fragmentation dating back to the trans-tropical highland bridges during the Mesozoic Era (from the early Jurassic, 195 Ma; Scotese et al., 1988); (3) stepwise long-distance dispersal across the equator and via mountain ranges (‘mountain-hopping’; Raven, 1963; Moore & Chater, 1971; Ball, 1990; Heide, 2002; Vollan et al., 2006); and lastly (4) direct long-distance seed dispersal by birds, wind and/or ocean currents (Cruden, 1966; Mu~ noz et al., 2004; Nathan et al., 2008). Six out of the c. 30 bipolar vascular plant species known belong to the genus Carex L. (Moore & Chater, 1971), a species-rich genus (> 2000 species) found especially in the temperate and cold regions of the Northern Hemisphere (Reznicek, 1990). Molecular studies focused on bipolar Carex species (Vollan et al., 2006; Escudero et al., 2010a; Villaverde et al., 2015) determined low levels of genetic differentiation between the disjunct populations, suggesting either mountain-hopping or direct long-distance dispersal, yet none of these studies could determine which hypothesis best explained the observed distributions of the bipolar species. Carex maritima Gunn. [sect. Foetidae (Tuckerm. ex L.H. Bailey) K€ uk.] is an arctic–alpine species with a circumboreal distribution including the European Alps and the Himalayas in the Northern Hemisphere, while in the Southern Hemisphere it is distributed from Ecuador to Patagonia (Govaerts et al., 2014; see Fig. 1). It is a wind-pollinated herbaceous hemicryptophyte or rhizome geophyte, which generally colonizes water-influenced habitats (e.g. lake, river, ocean shores or snowmelt water areas) and hydromorphic soils (e.g. beaches, fens, alluviums). Recent morphological and taxonomical studies of C. maritima (Moore & Chater, 1971; Reznicek, 2002) did not reveal any infraspecific taxa. Although Escudero et al. (2010a) detected some degree of genetic differen- tiation between Northern and Southern Hemisphere populations of C. maritima, no North American populations were included in their analyses. Although the vicariance hypothesis (Du Rietz, 1940) has traditionally been considered in explanation of Carex bipolar distribution (e.g. Villaverde et al., 2015), it can now easily be rejected for Carex bipolar species as the age of the diversification of the Cyperaceae family is younger than the transtropical highland bridges (82.6 Ma, 95% highest posterior density, HPD: 75.9–85.6 Ma; Escudero & Hipp, 2013). We can also discard parallel evolution for C. maritima because Escudero et al. (2010a) showed that populations from the Northern Hemisphere and the Southern Hemisphere were part of the same clade. The aim of the present study was to explain the bipolar distribution of C. maritima. Specifically, our aims were: (1) to clarify the direction of the dispersal (north-to-south or south-to-north); (2) in the case of genetic structure, to estimate the timing of dispersal; and (3) to test mountainhopping and direct long-distance dispersal hypotheses, as well as the relationship of C. maritima with biotic and abiotic factors that could explain the bipolar distribution. In order to accomplish this task we combined a wide sampling of the species’ range with data from nuclear and plastid molecular markers and bioclimatic data. We analysed the phylogenetic and phylogeographical relationships of C. maritima populations and compared its ecological niche throughout its distribution. MATERIALS AND METHODS Sampling We obtained plant material representing the geographical range of C. maritima (42 populations) as circumscribed by Egorova (1999). Samples used for the molecular study were obtained from fresh leaf material collected in the field and dried in silica gel, and from herbarium specimens (see Appendix S1 in Supporting Information). Vouchers for new collections are deposited in CAN, COLO, SI and UPOS herbaria (abbreviations according to Index Herbariorum; http://sciweb.nybg.org/science2/IndexHerbariorum.asp). We emphasized the sampling of the most northern Southern Hemisphere populations and we were able to obtain material from northern parts of Argentina. We were not, however, able to sample other more northerly populations in the Southern Hemisphere, from Ecuador and Bolivia (Govaerts et al., 2014). We also included four other species from Carex sect. Foetidae [10–15 species in total, including C. maritima; Reznicek, 2002; eMonocot Cyperaceae (http:// cyperaceae.e-monocot.org, accessed 3 December 2014)]: C. incurviformis Mack. (two populations), C. pseudofoetida K€ uk. (two populations), C. sajanensis V. I. Krecz. (four populations) and C. vernacula L. H. Bailey (three populations). As outgroups, we included taxa from the subgenus Vignea (P. Beauv. ex Lestib. f.) Perterm. (Hendrichs et al., 2004; Journal of Biogeography ª 2015 John Wiley & Sons Ltd 2 190 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima Bipolar disjunction in Carex maritima Figure 1 Distribution map of the sampled populations of Carex maritima, C. incuviformis and C. pseudofoetida. Carex maritima populations (46; some populations overlap in the map, see Appendix S1 for more details) are depicted by black circles, white diamonds represent C. incurviformis (two populations) and grey triangles indicate C. pseudofoetida samples (two populations). The dashed region denotes the distribution of C. maritima, obtained from the World Checklist of Cyperaceae (Govaerts et al., 2014). Escudero & Hipp, 2013): C. stenophylla Wahlenb. from section Divisae H. Christ ex K€ uk. (three populations), C. remota L. from section Remotae (Ascherson) C. B. Clarke (one population), C. canescens L. from section Glareosae G. Don (one population) and C. paniculata L. from section Heleoglochin Dumort. (one population; see Fig. 1 and Appendix S1). For all species, one individual per population was sampled except for four populations of C. maritima, for which two individuals were included (Yukon, Nunavut, Iceland and Argentina; see Appendix S1). PCR amplification and sequencing Total DNA was extracted using DNeasy Plant Mini Kit (Qiagen, Valencia, CA, USA). Forward and reverse primers were used for amplifications of the internal transcribed spacer (ITS) region (ITS-A, ITS-4; White et al., 1990; Blattner, 1999), external transcribed spacer (ETS) region (ETS-1f, 18SR; Starr et al., 2003), 50 trnK intron (50 trnKCarexF, 50 trnKCarexR; Escudero & Luce~ no, 2009) and rps16 intron (rps16– rps16R; Shaw et al., 2005). Thermal cycling was carried out in a Perkin Elmer PCR-system 9700 (Foster City, CA) under the conditions specified by Escudero et al. (2010a) for ITS and rps16; and Starr et al. (2003) and Escudero & Luce~ no (2009) for the ETS region and 50 trnK intron, respectively. Polymerase chain reaction (PCR) products were cleaned and sequenced following Escudero et al. (2008). Sequences were edited, automatically aligned with muscle (Edgar, 2004) and manually adjusted using Geneious 6.1.7 (Biomatters, Auckland, New Zealand). Phylogenetic and haplotype analyses We used a total of 44 sequences of ITS (six from GenBank), 43 of ETS (one from GenBank), 48 of 50 trnK (one from GenBank) and 51 of rps16 (two from GenBank; see Appendix S1). Each locus was analysed independently and in combination using maximum likelihood (ML) and Bayesian inference (BI). The combined nuclear and plastid aligned matrix consisted of 197 sequences from 64 individuals and 2699 sites (Appendix S1). There are two main strategies for inferring phylogenies from multiple DNA regions: (1) the total evidence approach, in which phylogeny is reconstructed from as much data as possible to obtain the dominant signal (Kluge, 1989); (2) gene-by-gene strategy, in which it is often possible to identify and explain gene tree incongruences (Rannala & Yang, 2008). In the last few years, coalescent species tree methods have been used to reconcile population history with incongruent phylogenies derived from different DNA regions (Degnan & Rosenberg, 2009). Because of the absence of incongruences between DNA regions (results not shown) and the little genetic variation found in them, we have used the total evidence strategy in the current study. Maximum likelihood analyses of the unpartitioned combined matrix were performed using RAxML 7.2.6 (Stamatakis, 2006) with a GTR-GAMMA model of sequence evolution and node support assessed with 1000 bootstrap (BS) replicates. Bayesian inference analyses were executed in MrBayes 3.2 (Ronquist et al., 2012). The most appropriate nucleotide substitution model for each partition was chosen using the Akaike information criterion (AIC) in jModelTest (Posada, 2008). Selected nucleotide substitution models were GTR+I, HKY and GTR+G for ITS1, 5.8S and ITS2, respectively; HKY+I for ETS; F81 + I for 50 trnK and GTR for rps16 (Appendix S1). The Markov chain Monte Carlo (MCMC) search was run for five million generations with a tree sampled every 1000 generations and two simultaneous analyses started from different random trees (Nruns = 2), each with four Markov chains (Nchains = 4). The first 20% of the trees were discarded from each run as the burn-in. A Bayesian majority-rule consensus tree was calculated in MrBayes with posterior probability (PP) values as a measure for clade support. We estimated the genealogical relationships among the two cpDNA haplotypes using the plastid 50 trnK–rps16 matrix and statistical parsimony as implemented in tcs 1.21 (Clement et al., 2000). Owing to the polyphyly of the section (see Results), this analysis was only performed for the core Foetidae, which comprises all sampled members of section Foetidae except for C. vernacula. The maximum number of differences resulting from single substitutions among Journal of Biogeography ª 2015 John Wiley & Sons Ltd 3 191 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima T. Villaverde et al. haplotypes was calculated with 95% confidence limits. Two informative indels in 50 trnK and one in rps16 were coded as a presence–absence character for analysis. Gaps due to mononucleotide repeat units (poly-T and poly-A), which are considered to be highly homoplasic (Kelchner, 2000), were treated as missing data. We estimated completeness of haplotype (50 trnK–rps16) sampling using a Stirling probability distribution as described by Dixon (2006), which calculates a posterior probability distribution of the total number of haplotypes (sampled or not). Divergence time estimation Dated phylogenies were estimated for the combined nuclear and plastid matrix in beast 1.7.5 (Drummond et al., 2012). Phylogeny was estimated using an uncorrelated lognormal relaxed clock model. A normal age prior with a mean of 14.82 Ma 2.5 Myr was applied to the root of the tree based on the previous estimate for the divergence of the subgenus Vignea (Escudero & Hipp, 2013). Analyses were conducted using two independent MCMC runs of 60 million generations each, assuming the birth–death tree prior with a mean substitution rate set at 1.0. Run convergence and burn-in were assessed in Tracer 1.5 (Rambaut & Drummond, 2009). Maximum clade credibility trees were calculated with TreeAnnotator 1.7.2 (Drummond & Rambaut, 2007) using a posterior probability limit of 0.7 and the mean heights option. Climatic environment – ecological niche We obtained bioclimatic data for the localities of our molecular sampling (56 samples of core Foetidae: 47 of C. maritima, two each of C. incurviformis and C. pseudofoetida, and five of C. sajanensis; ‘reduced data set’ from here on) in order to study the ecological factors influencing species’ range. We compiled a new data set (‘full data set’) and also obtained bioclimatic data. This new data set was completed by adding: (1) three additional populations from Austria, Italy and Sweden for which we failed to amplify any loci (Appendix S1); and (2) species occurrence data between 1950 and 2000 downloaded from the Global Biodiversity Information Facility data portal (http://www.gbif.org/, downloaded 22 December 2014) after pruning for likely incorrect identification or georeferencing (e.g. occurrences in oceans) and removing duplicate records from the same locality to reduce the effects of spatial autocorrelation (847 new presence data from preserved specimens of C. maritima). Finally, our full second data set included 894 populations in total (see Appendices S1 and S2). For each sampled population in our data sets we obtained values for 19 bioclimatic variables (Appendix S1) as described by Escudero et al. (2013). We ran principal components analyses (PCA) using the full and reduced climatic data sets, as Villaverde et al. (2015). The phylogenetic size-correction was performed in our reduced data set for non-independence among the observations for lineages. We represented data associated with the most important bioclimatic variables retained in the phylogenetic PCA for C. maritima in boxplots. In order to compare climate regime similarities and differences of the species of core Foetidae we included the samples of C. incurviformis, C. pseudofoetida and C. sajanensis in the PCA of the climatic environment. Past and present distribution under climatic change scenarios Species distribution modelling was performed to reconstruct the potential ranges of C. maritima under present climatic conditions and for two historical periods, the Last Interglacial (LIG; 120–140 ka) and the Last Glacial Maximum (LGM; 21 ka), with Maxent 3.3.3k (Phillips et al., 2006). Neither C. incurviformis nor C. pseudofoetida was included in the model with C. maritima because their different ecological requirements may confound C. maritima distribution modelling. Carex incurviformis is distributed only in North America and its ecology differs from that of C. maritima in this region (Reznicek, 2002). Moreover, the partial molecular differentiation (see Results) and their distinctive morphology (Reznicek, 2002) also support this decision. Settings were established following Blanco-Pastor et al. (2013). We performed a correlation analysis with the variance inflation factor (VIF) using the ‘vif’ function in the usdm package in R (R Core Team, 2014) and a correlation threshold of 0.7. Only three variables were uncorrelated and consequently included in the analyses: BIO1 (annual mean temperature), BIO6 (minimum temperature of the warmest month) and BIO12 (annual precipitation). Replicate runs (500) were performed by using the bootstrap run type. All 19 of these variables have a grid size of 30 arc seconds for present and LGM conditions but 2.5 arc minutes for LIG scenarios. These grid size differences required us to omit 82 data points from the C. maritima full data set from the model, leaving a total of 812 points. Analyses were performed for all populations of C. maritima and separately for Northern and Southern Hemisphere populations of C. maritima. We partitioned all the locality data into training and testing data sets (75% vs. 25%, respectively) in order to build niche models and to evaluate the quality of the model. Nonetheless, projections to past scenarios have to be interpreted with caution due to the absence of fossils to validate the model and the low number of existing localities in the Southern Hemisphere. Similar results were obtained when modelling the climatic niche of C. maritima using the reduced data set (results not shown). RESULTS Phylogenetic reconstruction BI and ML analyses revealed a lack of monophyly both for Carex sect. Foetidae and C. maritima. Strong support (100% BS/1 PP; Fig. 2) was obtained for the core Foetidae, including Journal of Biogeography ª 2015 John Wiley & Sons Ltd 4 192 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima Bipolar disjunction in Carex maritima C. canescens ROM 0.96 C. paniculata GRC C. remota YUG C. vernacula YUK 1 C. vernacula ORE 100 C. vernacula CAL C. stenophylla RU C. stenophylla TAJ 86 C. stenophylla TCS C. sajanensis CHI_1 1 C. sajanensis CHI_2 92 C. sajanensis CHI_3 C. sajanensis NEP_1 0.98 77 C. sajanensis EHM_1 63 C. pseudofoetida TAJ_1 C. pseudofoetida TAJ_2 C. maritima ASK_1 C. maritima YUK_1a C. maritima YUK_1b C. maritima YUK_2 C. maritima YUK_3 C. maritima NWT_1 C. maritima NWT_2 C. maritima NWT_3 C. maritima NWT_4 C. maritima NWT_5 C. maritima SAS_1 C. maritima NUN_1a C. maritima NUN_1b C. maritima NUN_2 C. maritima MAN_1 C. maritima MAN_2 C. maritima NFL_1 C. maritima NFL_2 C. maritima GNL_1 0.99 C. maritima GNL_2 97 C. maritima GNL_3 C. maritima GNL_4 C. maritima GNL_5 C. maritima ICE_1 C. maritima ICE_2a C. maritima ICE_3 C. maritima ICE_4 C. maritima ICE_5 C. maritima WSB_1 C. maritima SWI_1 C. maritima SWI_2 C. maritima NOR_1 C. maritima NOR_2 C. maritima NOR_3 C. maritima NOR_4 C. maritima RUE_1 C. maritima RUW_1 C. maritima RUC_1 C. maritima ICE_2b C. maritima RUW_2 0.90 C. incurviformis COL_1 75 C. incurviformis COL_2 C. maritima CLN_1 65 C. maritima CLN_2 0.99 C. maritima CLS_1 93 C. martitima AGS_1a C. maritima AGS_1b C. maritima AGS_3 0.0030 1 100 1 100 0.98 1 100 Figure 2 Majority rule (50%) consensus tree derived from the Bayesian analysis of Carex maritima and the related species in section Foetidae inferred from the combined nuclear (ITS and ETS) and chloroplast (50 trnK and rps16) matrix; C. remota, C. canescens and C. paniculata were used as outgroups. Numbers above and below the branches represent the Bayesian posterior probability (> 0.9 PP) and bootstrap (> 60% BS) values of the maximum likelihood analysis, respectively. A grey rectangle highlights the C. maritima samples of the Southern Hemisphere. Vertical bars indicate supraspecific taxa from the same taxonomic group. Abbreviations after the names correspond to the geographical regions of the world (Brummitt, 2001) and to the population number. The scale bar indicates substitutions per site. all sampled section Foetidae species except C. vernacula. Nevertheless, several species from section Foetidae, not sampled in the current study, could potentially also be part of the core Foetidae. A strongly supported (100% BS/1 PP) monophyletic C. stenophylla (sect. Divisae) was sister to the core Foetidae (100% BS/1 PP). Within the latter, C. sajanensis was retrieved as monophyletic (92% BS/1 PP) and sister to a strongly supported clade (97% BS/0.99 PP), including C. pseudofoetida, C. incurviformis and C. maritima. Two different subclades were detected: (1) a strongly supported lineage comprising all C. maritima samples from South America (93% BS/0.99 PP); and (2) C. incurviformis (75% BS/0.90 PP). Haplotype network The cpDNA haplotype network obtained for the core Foetidae (Fig. 3) revealed seven haplotypes and five missing haplotypes. A probability of 81% that all haplotypes have been sampled is given by Dixon’s (2006) method. Five haplotypes Sect. Remotae Sect. Foetidae Sect. Divisae Sect. Foetidae (Core Foetidae) were found within the sampled C. maritima populations. Two of them were widely distributed but geographically overlapping in part: one of them was shared by 10 samples of C. maritima from Russia, Canada and Greenland (H1), and the other by 26 samples of C. maritima from northern North America and Europe (H2). In addition, H1 was also shared with one population of C. incurviformis and two of C. pseudofoetida. Interestingly, all C. maritima samples from South America (5) shared the same exclusive haplotype (H3). We found unique haplotypes for C. maritima samples from Norway (H4; one sample) and for samples from eastern Russia (H5; two samples). Finally, C. sajanensis displayed two haplotypes (H5–H6) separated by four mutational steps from C. maritima haplotypes. Estimation of divergence times The dating analyses produced a congruent topology with respect to BI and ML analyses presented above (Fig. 4, Journal of Biogeography ª 2015 John Wiley & Sons Ltd 5 193 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima T. Villaverde et al. H4 C. marima (1) Norway H1 C. marima (5) South America C. pseudofoeda (2) India C. incurviformis (1) Colorado C. marima (10) North and Central Russia, Northwest Territories & Greenland H3 C. marima (2) Eastern Russia H5 H7 H2 C. sajanensis (1) C. marima (26) Alaska, Canada & Europe C. sajanensis (4) H6 Table 1). The divergence time of the clade comprising core Foetidae was 2.85 Ma (95% HPD: 0.93–5.01 Ma), which falls in the late Pliocene to middle Pleistocene. The diversification of the clade consisting of C. maritima, C. incurviformis and C. pseudofoetida could have occurred during the middle–late Pliocene to early–middle Pleistocene (1.61 Ma; 95% HPD: 0.61–2.96 Ma). Finally, the divergence of the clade consisting of C. maritima samples from South America could have begun during the middle–late Pleistocene (0.23 Ma; 95% HPD: 0.03–0.51 Ma). While the age of the core Foetidae could experience some variation after including some of the missing species from section Foetidae, the estimated age for C. maritima clade (the clade including all C. maritima samples) is reliable and should experience little or no variation after including unsampled species even if one or several of those fell nested within the C. maritima clade. Climatic environment The phylogenetic PCA of the reduced climatic data set showed that PC1 explained 50.35% of the variance whereas PC2 explained 22.29% (see Fig. 5). The variables with the highest loadings in PC1 were temperature seasonality (BIO4), temperature range (BIO7) and minimum temperature of the coldest month (BIO6; see Appendix S1). Maximum and minimum values for each variable are shown by groups (Table 2). Similar results were obtained when the analysis is not corrected with the phylogeny (results not shown). Northern and Southern Hemisphere samples of C. maritima were clearly separated into two groups, probably revealing some degree of ecological differentiation. The boxplots of the variables with the highest loadings revealed that C. maritima populations from the Northern Hemisphere occur in localities with greater temperature oscillations through the year and a wider range of minimum tempera- Figure 3 Haplotype network of concatenated cpDNA sequences of Carex maritima, C. pseudofoetida, C. incurviformis and C. sajanensis. Circles represent the seven haplotypes found (H1–H7), lines represent single mutational steps, and small black circles represent missing haplotypes. Numbers of samples per haplotype are indicated in parentheses. tures during the coldest month than populations from the Southern Hemisphere (Table 2, Fig. 6). The PCA of the full climatic data set showed that PC1 explained 65.9% of the variance whereas PC2 and PC3 explained 14.7% and 9.4%, respectively (Appendix S1). A clear separation between Northern and Southern Hemisphere samples of C. maritima is also obtained when plotting PC1 and PC3 or PC2 and PC3 (Appendix S2). Past and present distribution under climatic change scenarios Current conditions Our results show that the modelled ecological niche of C. maritima, including Northern and Southern Hemisphere samples, predicts suitable areas in both hemispheres. Values for AUC were all above 0.9, which indicate a good fit of the models. The average AUC values for each group and the most important environmental variables detected in each analysis are reported in Appendix S1. Scatter diagrams of the variables used in Maxent analyses also depicted clear differences between Northern and Southern Hemisphere populations of C. maritima (Appendix S2). The modelled ecological niche of C. maritima including only the Northern Hemisphere populations predicts suitable habitats also in the Southern Hemisphere (Appendix S2). By contrast, the modelled ecological niche of C. maritima including only Southern Hemisphere populations does not predict suitable habitats in the Northern Hemisphere. Past conditions The projection of suitable environments to past conditions in all lineages revealed a wider distribution range in LGM Journal of Biogeography ª 2015 John Wiley & Sons Ltd 6 194 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima Bipolar disjunction in Carex maritima C. paniculata C. canescens C. remota 0.81 8.05 1 C. vernacula 1.80 Figure 4 Maximum credibility clade phylogeny of the Bayesian divergence time analysis considering Carex maritima and other related species in section Foetidae carried out on a combined matrix of nuclear (ITS and ETS) and plastid (50 trnK and rps16) sequences. Carex remota, C. canescens, C. paniculata and C. stenophylla were used as outgroups. Node bars represent the 95% highest posterior density intervals of the divergence time estimates linked to nodes with posterior probabilities above 0.75 (values above branches) with mean ages inferred for clades in million years (below branches). 1 C. stenophylla 0.54 0.83 1 9.04 0.63 C. sajanensis 1 C. incurviformis 2.85 C. maritima Southern Hemisphere 1 0.87 1.61 0.09 0.76 0.23 MIOCENE 15.0 12.5 scenarios than at the present time and in the LIG scenarios (Appendix S2). Although suitable environments are predicted in the Southern Hemisphere for C. maritima populations from the Northern Hemisphere, when Southern Hemisphere populations are analysed alone these areas are considerably reduced in LGM scenarios and absent in the LIG scenario (Appendix S2). These results have to be interpreted with caution due to the absence of fossils to validate the model. DISCUSSION Pleistocene north-to-south long-distance dispersal Haplotypes H1 and H2 are widely distributed throughout the Northern Hemisphere (North America, Europe and Asia) and comprise the highest number of haplotype connections (Fig. 3), implying under the coalescent theory that they amount to the ancestral haplotypes (Posada & Crandall, 2001). South American C. maritima populations are monophyletic and nested with a strong statistical support within the Northern Hemisphere accessions (Figs 2 & 3). In addition, the haploid genotype diversity pattern consisting of four different haplotypes found in relation to the C. maritima populations of the Northern Hemisphere (H1, H2, H4, H5), whilst a single haplotype was detected for the southern populations (H3; Fig. 3), suggests a migration event from the Northern Hemisphere to the Southern Hemisphere as the most plausible explanation. This evidence, together with the fact that 11 out of the 15 species in Carex sect. Foetidae (eMonocot Cyperaceae; http://cyperaceae.e-monocot.org, accessed 3 December 2014) are also distributed in the Northern Hemisphere, supports the hypothesis that C. maritima originated in the Northern Hemisphere, according to our 10.0 PLIOCENE 7.5 5.0 PLEISTOCENE 2.5 C. maritima Northern Hemisphere + C. pseudofoetida 0.0 Ma analysis during the middle–late Pliocene and early–middle Pleistocene (Table 1, Fig. 4). The other five bipolar Carex species manifest most of their distribution in the Northern Hemisphere (Govaerts et al., 2014). At least C. arctogena, C. macloviana and C. maritima display a higher morphological variation in North America than in South America (Moore & Chater, 1971), which could also support the idea that the bipolar species generally migrated southwards (Raven, 1963; Moore & Chater, 1971). Studies of other bipolar taxa have also suggested a north-tosouth dispersal as the most plausible migration direction (e.g. Moore & Chater, 1971; Vollan et al., 2006; Popp et al., 2011). The C. maritima biogeographical history elucidated in our study appears to be congruent with the predominantly inferred pattern, and it seems that Northern Hemisphere to South Hemisphere dispersal is predominant in plant dispersals (reviewed in Wen & Ickert-Bond, 2009). However, other plant genera present the opposite direction of dispersal. For example, the centre of origin of the genus Larrea (Zygophyllaceae) is located in South America and this genus was inferred to have migrated to North America during the late Neogene by long-distance dispersal, using way stations in Peru and Bolivia and probably mediated by birds (Lia et al., 2001). Likewise, the Rubiaceae family was inferred to have migrated from South to North America during the late Palaeocene–early Eocene using land bridges (Antonelli et al., 2009), as was Hoffmannseggia glauca (Fabaceae) via birds during the late Miocene or later (Simpson et al., 2005). Mountain-hopping or direct long-distance dispersal? The subsequent question arises of how the inferred northto-south middle–late Pleistocene long-distance dispersal Journal of Biogeography ª 2015 John Wiley & Sons Ltd 7 195 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima T. Villaverde et al. Table 1 Divergence times of clades in Carex sect. Foetidae and outgroups presented as the posterior probability followed by the mean time to the most recent common ancestor in million years and the 95% highest posterior density (HPD) interval obtained from the divergence time analysis of the combined nuclear (ITS and ETS) and plastid (50 trnK intron and rps16) regions. Carex maritima populations of the Northern Hemisphere (NH) and Southern Hemisphere (SH), respectively, are indicated. Clade 6 C. remota + C. vernacula C. vernacula C. stenophylla + Core Foetidae (C. sajanensis + C. incurviformis + C. maritima + C. pseudofoetida) C. stenophylla Core Foetidae (C. sajanensis + C. incurviformis + C. maritima + C. pseudofoetida) C. sajanensis C. incurviformis + C. maritima NH + C. maritima SH + C. pseudofoetida C. incurviformis C. maritima SH -2 0 PC2 2 4 C. maritima Northern Hemisphere C. maritima Southern Hemisphere C. incurviformis C. pseudofoetida C. sajanensis -2 0 PC1 2 4 6 Figure 5 Scatter plot of the first two components explaining up to 72.64% of the observed variance, derived from the principal components analysis as corrected by phylogeny and depicting the position in a climate-niche space of Northern and Southern Hemisphere samples of Carex maritima (black and white circles, respectively), C. pseudofoetida (triangles), C. incurviformis (diamonds) and C. sajanensis (crosses). Table 2 Maximum and minimum values of the variables with the highest loadings for principal component 1 for the Northern Hemisphere populations (NH) and Southern Hemisphere populations (SH) of Carex maritima. Bioclimatic variables correspond to temperature seasonality (BIO4, SD), the temperature range (BIO7 = BIO6 – BIO5, C), the minimum temperature during the coldest month (BIO6, C) and the maximum temperature during the coldest month (BIO5). C. maritima HN C. maritima SH min. max. min. max. BIO4 BIO7 BIO6 35.33 177.28 24 32.78 14.2 58 15.4 25.4 44.9 3.5 9.6 0.6 could have occurred. According to our data, the current C. maritima distribution can be explained by either of two hypotheses: (1) Northern Hemisphere populations could Posterior probability Mean (Ma) 95% HPD interval (Ma) 0.81 1 0.83 8.0522 1.8038 9.0452 2.7638 0.2665 3.6505 13.1959 3.7436 14.2733 1 1 0.5365 2.8456 0.0291 0.9327 1.2872 5.0077 1 1 0.87 0.76 0.6275 1.6110 0.0884 0.2266 0.0440 0.6062 0 0.0286 1.4295 2.9603 0.3099 0.5092 have migrated stepwise by mountain-hopping all the way through the Andes, with a posterior extinction of most of the intermediate populations; or (2) Northern Hemisphere populations could have been disseminated by a direct longdistance dispersal to South America, where they subsequently colonized northwards or southwards until reaching their current distribution (Fig. 1). The mountain-hopping hypothesis (Ball, 1990) proposes a long-distance, stepwise migration of arctic and temperate taxa using mountains peaks as stepping-stones to cross the tropics. A route connecting North and South America through the American cordillera has been in place since the late Miocene epoch (Smith, 1986). Then, a gradual uplift of the cordillera during the late Pliocene created the high mountainous environment with a much colder climate later on during the Pleistocene compared to that occurring today at the same latitudes and elevations (van der Hammen, 1974). According to our results, from the Last Interglacial (LIG; c. 120 ka) to the present time similar ecological niches could have existed that were suitable for C. maritima in South America (although these results should to be taken with caution, see Results; Appendix S2). Therefore, we cannot rule out the mountain-hopping migration since the early Pleistocene, with a subsequent extinction of most of the northern South American intermediate populations. In addition, the sister relationship between C. maritima of the Southern Hemisphere and C. incurviformis (present in western North America yet reaching southern latitudes) could also support this hypothesis (nonetheless see lack of clade support; Fig. 2). As already demonstrated by Heide (2002), changes in flowering requirements would not have been necessary for the other bipolar Carex species to migrate across of the tropical belt, still making mountain-hopping a plausible premise. Alternatively, C. maritima could have reached the Southern Cone by a direct long-distance dispersal event, with a subsequent genetic differentiation in the South American continent and a northward or southward colonization along Journal of Biogeography ª 2015 John Wiley & Sons Ltd 8 196 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima Bipolar disjunction in Carex maritima (a) BIO7 (°C) BIO4 (SD) (c) NH SH NH SH NH SH BIO6(°C x 10) Figure 6 Carex maritima boxplots comparing the three bioclimatic variables with the highest loadings regarding the first component of the bioclimatic principal components analysis (PCA) taking into account the Northern and Southern Hemisphere samples (NH and SH). (a) Temperature seasonality (BIO4), (b) annual temperature range (BIO7, i.e. minimum temperature during the warmest month minus maximum temperature during the coldest month, BIO6 – BIO5), and (c) minimum temperature during the warmest month (BIO6). Each box represents the interquartile range which contains 50% of the values and the median (horizontal line across the box); the whiskers are the lines that extend from the box to the highest and lowest values, excluding outliers (o). (b) the Andes, as suggested for the bipolar C. arctogena (Villaverde et al., 2015). The molecular data in this study, without genetic structure between northern and southern populations within each hemisphere, but strong genetic structure between both hemispheres, could support the direct long-distance dispersal hypothesis and subsequent genetic differentiation. Nevertheless, more information is still needed to confirm either the mountain-hopping or the direct long-distance dispersal hypothesis. Breeding system, dispersal syndrome and the bipolar disjunction Some self-fertilization is a reproductive characteristic displayed by many species with disjunct populations in the temperate zones (Carlquist, 1983). This attribute could favour local survival and establishment after long-distance dispersal events, given that a single propagule of self-compatible individuals could in principle be sufficient to start a sexually reproducing colony (Baker, 1955). In congruence, Carex species are predominantly monoecious and in general highly self-pollinated (Friedman & Barrett, 2009), which has been inferred from studies based on hand pollinations, isozyme work (e.g. Ohkawa et al., 2000; Friedman & Barrett, 2009) and microsatellite data (e.g. Escudero et al., 2010b, 2013). This characteristic could explain, at least in part, the often successful colonization of Carex species after a long-distance dispersal event (Moore & Chater, 1971; Ball, 1990; Escudero et al., 2009). Carex maritima inhabits water-influenced areas (e.g. lakes, river, ocean shores or snowmelt water areas) or else populates hydromorphic soils (e.g. beaches, fens, alluviums), and seed dispersal of C. maritima could be mediated by birds, wind or ocean currents. Except for their small size, fruits of C. maritima lack the evident morphological features for a long-distance dispersal, unlike other bipolar species (C. microglochin; Savile, 1972). On the one hand, species with small seeds and from water-influenced habitats are often highly dispersible taxa (McGlone et al., 2001). On the other hand, the long-distance dispersal of seeds might not necessarily be driven by standard dispersal vectors inferred from plant morphology (as described by Higgins et al., 2003) or by regular events; in fact, great long-distance dispersals (> 100 km) are usually associated with stochastic events (unusual behaviour of regular events or a combination of vectors; Nathan et al., 2008). Thus, arctic species have been demonstrated to migrate enormous distances despite the lack of specific syndromes (Abbott & Brochmann, 2003). Considering the extreme dispersal distance, together with the shape and structure of the C. maritima propagules, we consider that its dispersal was more likely to have been mediated by migratory animals than by wind or ocean currents, which seem insufficient for such an enormous task. Some birds which migrate from North America to temperate zones of South America have already been pointed out as the most likely dispersal agents of the several disjunct plant groups (Cruden, 1966, and references therein; Popp et al., 2011). Moreover, arrivals of Carex species to newly formed islands have predominantly been reported to happen when seeds were embedded in mud attached to birds’ feet or else when eaten and carried inside by birds (Carlquist, 1967). Therefore, we consider it plausible that C. maritima could have acquired its bipolar distribution by means of bird-mediated dispersal. CONCLUSIONS This study contributes to the general knowledge regarding biogeographical patterns of bipolar taxa whilst presenting a combination of multiple approaches (phylogenetic and Journal of Biogeography ª 2015 John Wiley & Sons Ltd 9 197 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima T. Villaverde et al. phylogeographical analyses, together with divergence time estimates and bioclimatic data) to test the traditional hypotheses used to understand the distribution of bipolar species. Carex maritima populations of the Southern Hemisphere were retrieved as a monophyletic lineage within a paraphyletic C. maritima. The phylogeographical structure found within C. maritima suggests that the bipolar disjunction could be explained by a middle–late Pleistocene longdistance dispersal derived from the Northern Hemisphere. Our study highlights the importance of long-distance dispersal mechanisms to explain this fascinating plant distribution pattern. ACKNOWLEDGEMENTS The authors thank all staff from herbaria CAN, COLO, E, M, MSB, SI, UPOS and WIN for granting us access to their collections and for providing plant material; E. Maguilla (Universidad Pablo de Olavide, UPO) and Francisco Rodrıguez-Sanchez (Estaci on Biol ogica de Do~ nana, EBDCSIC) for their help with the Maxent analyses and map editing; L.P. Bruederle (University of Colorado, Denver) and P. Vargas (Real Jardın Botanico de Madrid) for assistance in plant collections; and M. Mıguez and F.J. Fernandez (UPOS) for technical support. We also thank the University of Helsinki master’s student A. Ginter for translations of Russian data labels. This research was supported by the Spanish Ministry of Science and Technology through the project CGL2012-38744. Further support was also provided by the Regional Ministry of Economy, Innovation, Science and Employment through project RNM-2763. REFERENCES Abbott, R.J. & Brochmann, C. (2003) History and evolution of the arctic flora: in the footsteps of Eric Hulten. Molecular Ecology, 12, 299–313. Antonelli, A., Nylander, J.A.A., Persson, C. & Sanmartın, I. (2009) Tracing the impact of the Andean uplift on Neotropical plant evolution. Proceedings of the National Academy of Sciences USA, 106, 9749–9754. Baker, H.G. (1955) Self-compatibility and establishment after ‘long-distance’ dispersal. Evolution, 9, 347–349. Ball, P.W. (1990) Some aspects of the phytogeography of Carex. Canadian Journal of Botany, 68, 1462–1472. Blanco-Pastor, J.L., Fernandez-Mazuecos, M. & Vargas, P. (2013) Past and future demographic dynamics of alpine species: limited genetic consequences despite dramatic range contraction in a plant from the Spanish Sierra Nevada. Molecular Ecology, 22, 4177–4195. Blattner, F.R. (1999) Direct amplification of the entire ITS region from poorly preserved plant material using recombinant PCR. BioTechniques, 219, 1180–1186. Brummitt, R.K. (2001) World geographical scheme for recording plant distributions, 2nd edn. Hunt Institute for Botanical Documentation, Pittsburgh, PA. Carlquist, S. (1967) The biota of long-distance dispersal. V. Plant dispersal to Pacific Islands. Bulletin of the Torrey Botanical Club, 94, 129–162. Carlquist, S. (1983) Intercontinental dispersal. Sonderbd naturwiss Vereins in Hamburg, 7, 37–47. Clement, M., Posada, D. & Crandall, K. (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657–1660. Crisp, M.D., Trewick, S.A. & Cook, L.G. (2011) Hypothesis testing in biogeography. Trends in Ecology and Evolution, 26, 66–72. Cruden, R.W. (1966) Birds as agents of long-distance dispersal for disjunct plant groups of the temperate Western Hemisphere. Evolution, 20, 517–532. Darwin, C. (1872) The origin of the species. Murray, London. Degnan, J.H. & Rosenberg, N.A. (2009) Gene tree discordance, phylogenetic and the multispecies coalescent. Trends in Ecology and Evolution, 24, 332–340. Dixon, C. (2006) A means of estimating the completeness of haplotype sampling using the Stirling probability distribution. Molecular Ecology Notes, 6, 650–652. Donoghue, M. (2011) Bipolar biogeography. Proceedings of the National Academy of Sciences USA, 108, 6341–6342. Drummond, A.J. & Rambaut, A. (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology, 7, 214. Drummond, A.J., Suchard, M.A., Xie, D. & Rambaut, A. (2012) Bayesian phylogenetics with BEAUti and the BEAST 1.7. Molecular Biology and Evolution, 29, 1969–1973. Du Rietz, G.E. (1940) Problems of the bipolar plant distribution. Acta Phytogeographica Suecica, 13, 215–282. Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32, 1792–1797. Egorova, T.V. (1999) The sedges (Carex L.) of Russia and adjacent states (within the limits of the former USSR). St Petersburg State Chemical-Pharmaceutical Academy, St Petersburg; Missouri Botanical Garden Press, St Louis, MO. Escudero, M. & Hipp, A. (2013) Shifts in diversification rates and clade ages explain species richness in higher-level sedge taxa (Cyperaceae). American Journal of Botany, 100, 1–9. Escudero, M. & Luce~ no, M. (2009) Systematics and evolution of Carex sects. Spirostachyae and Elatae (Cyperaceae). Plant Systematics and Evolution, 279, 163–189. Escudero, M., Valcarcel, V., Vargas, P. & Luce~ no, M. (2008) Evolution in Carex L. sect. Spirostachyae (Cyperaceae): a molecular and cytogenetic approach. Organisms Diversity & Evolution, 7, 271–291. Escudero, M., Valcarcel, V., Vargas, P. & Luce~ no, M. (2009) Significance of ecological vicariance and long-distance dispersal in the diversification of Carex sect. Spirostachyae (Cyperaceae). American Journal of Botany, 96, 2100–2114. Journal of Biogeography ª 2015 John Wiley & Sons Ltd 10 198 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima Bipolar disjunction in Carex maritima Escudero, M., Valcarcel, V., Vargas, P. & Luce~ no, M. (2010a) Bipolar disjunctions in Carex: long-distance dispersal, vicariance, or parallel evolution? Flora, 205, 118–127. Escudero, M., Vargas, P., Arens, P., Ouborg, N.J. & Luce~ no, M. (2010b) The east-west-north colonization history of the Mediterranean and Europe by the coastal plant Carex extensa (Cyperaceae). Molecular Ecology, 19, 352–370. Escudero, M., Maguilla, E. & Luce~ no, M. (2013) Selection by climatic regime and neutral evolutionary processes in holocentric chromosomes (Carex gr. laevigata: Cyperaceae): a microevolutionary approach. Perspectives in Plant Ecology, Evolution and Systematics, 15, 118–129. Friedman, J. & Barrett, S.C.H. (2009) The consequences of monoecy and protogyny for mating in wind-pollinated Carex. New Phytologist, 181, 489–497. Gmelin, J.G. (1747) Flora Sibirica sive historia plantarum Sibiriae, Tomus 1. Typis Academiae. Scientiaruma, Petropoli. Govaerts, R., Koopman, J., Simpson, D., Goetghebeur, P., Wilson, K., Egorova, T. & Bruhl, J. (2014) World Checklist of Cyperaceae. Facilitated by the Royal Botanic Gardens, Kew. Available at: http://apps.kew.org/wcsp/ (accessed 26 November 2014). van der Hammen, T. (1974) The Pleistocene changes of vegetation and climate in tropical South America. Journal of Biogeography, 1, 3–26. Heide, O.M. (2002) Climatic flowering requirements of bipolar sedges Carex spp. and the feasibility of their transequatorial migration by mountain-hopping. Oikos, 99, 352–362. Hendrichs, M., Michalski, S., Begerow, D., Oberwinkler, F. & Hellwig, F.H. (2004) Phylogenetic relationships in Carex, subgenus Vignea (Cyperaceae), based on ITS sequences. Plant Systematics and Evolution, 246, 109–125. Higgins, S.I., Nathan, R. & Cain, M.L. (2003) Are longdistance dispersal events in plants usually caused by nonstandard means of dispersal? Ecology, 84, 1945–1956. Kelchner, S.A. (2000) The evolution of non-coding chloroplast DNA and its application in plant systematics. Annals of the Missouri Botanical Garden, 87, 482–498. Kluge, A.G. (1989) A concern for evidence and a phylogenetic hypothesis of relationships among Epicrates (Boidae, Serpentes). Systematic Zoology, 38, 7–25. Lia, V.V., Confalonieri, V.A. & Comas, C.I. (2001) Molecular phylogeny of Larrea and its allies (Zygophyllaceae): reticulate evolution and the probable time of creosote bush arrival to North America. Molecular Phylogenetics and Evolution, 21, 309–320. McGlone, M.S., Duncan, R.P. & Heenan, P.B. (2001) Endemism, species selection and the origin and distribution of the vascular plant flora of New Zealand. Journal of Biogeography, 28, 199–216. Moore, D.M. & Chater, A.O. (1971) Studies on bipolar species I. Carex. Botaniska Notiser, 124, 317–334. Mu~ noz, J., Felicısimo, A.M., Cabezas, F., Burgaz, A.R. & Martınez, I. (2004) Wind as a long-distance dispersal vehicle in the Southern Hemisphere. Science, 304, 1144–1147. Nathan, R., Schurr, F.M., Spiegel, O., Steinitz, O., Trakhtenbrot, A. & Tsoar, A. (2008) Mechanisms of long-distance seed dispersal. Trends in Ecology and Evolution, 23, 638–647. Ohkawa, T., Yokota, M. & Hoshino, T. (2000) Aneuploidal population differentiation in Carex sociata Boott (Cyperaceae) of the Ryukyu Islands, Japan. Botanical Journal of the Linnean Society, 132, 337–358. Phillips, S.J., Anderson, R.P. & Schapire, R.E. (2006) Maximum entropy modeling of species geographic distributions. Ecological Modelling, 190, 231–259. Popp, M., Mirre, V. & Brochmann, C. (2011) A single MidPleistocene long-distance dispersal by a bird can explain the extreme bipolar disjunction in crowberries (Empetrum). Proceedings of the National Academy of Sciences USA, 108, 6520–6525. Posada, D. (2008) jModelTest: phylogenetic model averaging. Molecular Biology and Evolution, 25, 1253–1256. Posada, D. & Crandall, K. (2001) Intraspecific gene genealogies: trees grafting into networks. Trends in Ecology and Evolution, 1, 37–45. Posadas, P., Crisci, J. & Katinas, L. (2006) Historical biogeography: a review of its basic concepts and critical issues. Journal of Arid Environments, 66, 389–403. R Core Team (2014) R: a language and environment for statistical computing. Version 3.1.1 Available at: http://www. r-project.org. Rambaut, A. & Drummond, A.J. (2009) Tracer v1.5. Available at: http://tree.bio.ed.ac.uk/software/tracer/. Rannala, B. & Yang, Z. (2008) Phylogenetic inference using whole genomes. Annual Review of Genomics and Human Genetics, 9, 217–231. Raven, P.H. (1963) Amphitropical relationships in the floras of North and South America. The Quarterly Review of Biology, 38, 151–177. Raven, P.H. & Axelrod, D.I. (1974) Biogeography and past continental movements. Annals of Missouri Botanical Garden, 61, 539–673. Reznicek, A.A. (1990) Evolution in sedges (Carex, Cyperaceae). Canadian Journal of Botany, 68, 1409–1432. Reznicek, A.A. (2002) Carex sect. Foetidae. Flora of North America north of Mexico, Vol. 23 (ed. by Flora of North America Editorial Committee), pp. 309–311. Oxford University Press, New York. Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., H€ ohna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology, 61, 539–542. Sanmartın, I. & Ronquist, F. (2004) Southern hemisphere biogeography inferred by event-based models: plant versus animal patterns. Systematic Biology, 53, 216–243. Sanmartın, I., Enghoff, H. & Ronquist, F. (2001) Patterns of animal dispersal, vicariance and diversification in the Holarctic. Biological Journal of the Linnean Society, 73, 345–390. Journal of Biogeography ª 2015 John Wiley & Sons Ltd 11 199 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar ________________________________________________________________ ________________________________________________________________ disjunction of Carex maritima T. Villaverde et al. Savile, D.B.O. (1972) Arctic adaptations in plants. Monograph No. 6. Canada Department of Agriculture Research Branch, Ottawa. Scotese, C., Gahagan, L. & Larson, R. (1988) Plate tectonic reconstructions of the Cretaceous and Cenozoic ocean basins. Tectonophysics, 155, 27–48. Scotland, R.W. (2011) What is parallelism? Evolution and Development, 13, 214–227. Shaw, J., Lickey, E.B., Beck, J.T., Farmer, S.B., Liu, W., Miller, J., Siripun, K.C., Winder, C.T., Schilling, E.E. & Small, R.L. (2005) The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis. American Journal of Botany, 92, 142–166. Simpson, B.B., Tate, J.A. & Weeks, A. (2005) The biogeography of Hoffmannseggia (Leguminosae, Caesalpinioideae, Caesalpinieae): a tale of many travels. Journal of Biogeography, 32, 15–27. Smith, J.M.B. (1986) Origins of the Australasian tropicalpine floras. CSIRO, Melbourne. Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688–2690. Starr, J.R., Harris, S.A. & Simpson, D.A. (2003) Potential of the 5 and 3 ends of intergenic spacer (IGS) of rDNA in the Cyperaceae: new sequences for lower-level phylogenies in sedges with an example from Uncinia Pers. International Journal of Plant Sciences, 164, 213–227. Villaverde, T., Escudero, M., Martın-Bravo, S., Bruederle, P.L., Luce~ no, M. & Starr, J.R. (2015) Direct long-distance dispersal best explains the bipolar distribution of Carex arctogena (Carex sect. Capituligerae, Cyperaceae). Journal of Biogeography, doi:10.1111/jbi.12521. Vollan, K., Heide, O.M., Lye, K.A. & Heun, M. (2006) Genetic variation, taxonomy and mountain-hopping of four bipolar Carex species (Cyperaceae) analysed by AFLP fingerprinting. Australian Journal of Botany, 54, 305–313. Wen, J. & Ickert-Bond, S.M. (2009) Evolution of the Madrean-Tethyan disjunctions and the North and South American amphitropical disjunctions in plants. Journal of Systematics and Evolution, 47, 331–348. White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications (ed. by M. Innis, D. Gelfand, D. Sninsky and T. White), pp. 315–322. Academic Press, San Diego, CA. SUPPORTING INFORMATION Additional Supporting Information may be found in the online version of this article: Appendix S1 Supplementary tables. Studied material of Carex maritima, related species and outgroups (Table S1); molecular characteristics of the amplified regions (Table S2); results from the principal components analysis of 19 bioclimatic variables from the WorldClim database, uncorrected (on full and reduced data sets) and corrected for phylogeny (Tables S3–S5); description of bioclimatic variables (Table S6); and AUC values from Maxent analyses (Table S7). Appendix S2 Supplementary figures. Distribution map of Carex maritima (Fig. S1); ecological niche models of C. maritima groups fitted to current climatic conditions from Maxent analyses (Fig. S2), and projections of the models to Last Glacial Maximum (18–21 ka; MIROC and CCSM models) and Last Interglacial Period (c. 120–140 ka) (Fig. S3); scatter plots of the uncorrelated bioclimatic variables used in Maxent analyses (Fig. S4); and scatter plot of the three first components from the principal components analysis of the full data set (Fig. S5). BIOSKETCH Tamara Villaverde is a PhD student at Pablo de Olavide University, Seville (Spain). Her research is focused on the evolution and phylogeography of angiosperms, with special interest in the systematics and biogeography of the genus Carex (Cyperaceae). Author contributions: M.E. and M.L. conceived the idea; T.V., S.M-B and M.L. collected the plant material; T.V., M.E. and S.M-B, carried out the lab work and analysed the data; T.V., M.E. and S.M-B led the writing and drafted the manuscript, although all authors contributed to its preparation. Editor: Liliana Katinas Journal of Biogeography ª 2015 John Wiley & Sons Ltd 12 200 201 bioclimatic variables (Table S6); and AUC values from MAXENT analyses (Table S7). WorldClim database, uncorrected (on full and reduced data sets) and corrected for phylogeny (Tables S3–S5); description of characteristics of the amplified regions (Table S2); results from the principal components analysis of 19 bioclimatic variables from the Appendix S1 Supplementary tables. Studied material of Carex maritima, related species and outgroups (Table S1); molecular Tamara Villaverde, Marcial Escudero, Modesto Luceño and Santiago Martín-Bravo Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction of Carex maritima (Cyperaceae) SUPPORTING INFORMATION Journal of Biogeography Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima GRC ROM YUG CAL YUK ORE C. paniculata subsp. paniculata C. canescens C. remota C. vernacula C. vernacula C. vernacula - 61.28698 38.44445 19.09025 45.60321 21.22555 Pop. code Latitude Species - -138.52892 -119.32149 43.15227 24.61613 39.78673 Longitude world (Brummitt, 2001) and population number. 202 USA, California, Wheeler Peak. Bell 1459. (WS s.n.) Canada, Yukon. Kluane Lake. L. P. Bruederle 08142010_01c. 14/VIII/2010. (COLO s.n.) USA, Oregon. Mason 9130. (POM s.n.) Greece, Epiro, Ioannina, Kambos Despoti. M. Luceño 0808ML, 23/VI/2008. (UPOS3419) Romania, Carpathians, Bâle Lake. M. Pusças s.n., 20/07/2013. (Personal collection) Montenegro, High Dinarics, Durmitor National Park. P. Jiménez-Mejías 198PJM10, 17/VII/2010. (UPOS4006) Label information /AF285022/-/- -/ KR827099 / KR827144 /- -/EU001077/-/- KR827053/ KR827096 / KR827141 / KR827192 KR827051/ KR827094 / KR827139 / KR827190 GenBank accession ETS/ITS/rps16/trnK KR827052/ KR827095 / KR827140 / KR827191 clade and GenBank accessions for markers used for molecular studies. Population codes correspond to geographical regions of the stenophylla, C. canescens, C. remota and C. paniculata, including population code, coordinates, voucher information, corresponding Table S1 List of material studied of Carex maritima, C. incurviformis, C. pseudofoetida, C. sajanensis, C. vernacula and the outgroups C. Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima TCS TAJ RU CHI_1 CHI_2 CHI_3 EHM_1 NEP_1 TAJ_1 TAJ_2 C. stenophylla C. stenophylla C. stenophylla C. sajanensis C. sajanensis C. sajanensis C. sajanensis C. sajanensis C. pseudofoetida C. pseudofoetida 38.61667 38.48333 27.90611 27.93333 30.30000 33.55000 30.30000 - 38.68333 40.42275 72.86667 74.31667 86.70556 88.63333 90.60000 91.35000 90.60000 - 73.71667 44.23447 203 Tajikistan, Gorno-Badakhshan, East Pamir. B. Dickoré 17842, 09/IX/2002. (MSB162332) India, Sikkim, Chuu Valey. Edinburgh Expedition to Northern Sikkim (1996) 364, 20/VII/1996. (E00047590) Nepal, Sagarmatha, Machhermo Kola. First Darwin Nepal Fieldwork Training Expedition 171. 15/V/2004. (E00229251) Tajikistan, Gorno-Badakhshan, Murgab. B. Dickoré 18037, 12/IX/2009. (MSB162329) China, Qinghai, Tibet. B. Dickoré 4409, 24/VIII/1989. (MSB140876) China, Xizang Zizhiqu, Dangxiong Xian. B. Dickoré 4010, 14/VIII/1989. (MSB142360) China, Xizang Zizhiqu, Dangxiong Xian. B. Dickoré 3765, 11/VIII/1989. (MSB140868) Tajikistan, Gorno-Badakhshan, East Pamir. B. Dickoré 18239, 16/IX/2002. (MSB162331) Russia. (MO04981469) Armenia, Aragatsotn Province, Mt. Aragats. G. Fayuush 07-1385, 23/VI/2007. (NY s.n.) -/-/ KR827150 / KR827199 -/ KR827102 / KR827151 / KR827200 KR827057/ KR827101 / KR827149 / KR827198 KR827056/ KR827100 / KR827148 / KR827197 KR827055/-/ KR827147 /- -/-/ KR827146 / KR827196 -/-/ KR827145 / KR827195 EU001224/EU001070/-/- -/ KR827097 / KR827142 / KR827193 KR827054/ KR827098 / KR827143 / KR827194 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima COL_1 COL_2 AGS_1a AGS_1b AGS_2 CLN_1 CLN_2 CLS_1 ASK_1 GNL_1 C. incurviformis C. incurviformis C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima 65.45000 68.19472 -52.76021 -20.98333 -28.61667 -54.05803 -53.34667 -53.34666 39.19275 38.86297 -52.55000 -152.74750 -69.02174 -68.55000 -69.86667 -67.39000 -68.27930 -68.27933 -105.45410 -105.37929 204 Greenland, Kangerdluarssuk, Qivaqe. S. Holt 785, 15/VIII/1977. (CAN488203) Chile, Iquique, Pica. S. Teillier 3258, 24/I/1994. (MIN934751) Chile, Región Magallanes-Antártica, Tierra del Fuego. M. Luceño 18ML06, 6/I/2006. (UPOS1830) USA, Alaska, Chandler Lake. B. A. Benett 02-393, 23/VII/2002. (CAN589262) Chile, Atacama, El Tránsito. S. Teillier 4953, 15/II/2002. (MIN934748) USA, Colorado, Park County, Pike National Forest, Horseshoe Cirque area. Tallent 517. (MICH s.n.) Argentina, Tierra del Fuego, Río Grande. S. Martín-Bravo 42SMB10, 15/I/2010. (UPOS4277) Argentina, Tierra del Fuego, Río Grande. S. Martín-Bravo 42SMB10, 15/I/2010. (UPOS4274) Argentina, Tierra del Fuego, Río Grande. J. Starr P9-1 10013. 12/I/2010 (UPOS3930) USA, Colorado, Park County. D. Randolph 17402, 23/VII/1984. (CAN499701) KR827062/ KR827107 /-/ KR827205 -/ KR827113 / KR827160 / KR827212 KR827061/ KR827106 /-/ KR827204 KR827066/ KR827112 / KR827158 / KR827210 KR827059/ KR827104 / KR827153 / KR827202 KR827077/ KR827121 / KR827171 / KR827221 KR827076/ KR827120 / KR827170 / KR827220 KR827073/-/ KR827167 / KR827218 -/DQ115186/-/- KR827058/ KR827103 / KR827152 / KR827201 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima GNL_2 GNL_3 GNL_4 GNL_5 ICE_1 ICE_2a ICE_2b ICE_3 ICE_4 ICE_5 NFL_1 NFL_2 C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritime C. maritima C. maritima C. maritima C. maritima C. maritima 47.61587 47.38583 64.39412 63.55043 65.81401 65.01748 65.01748 64.07082 61.16096 61.00098 72.86333 73.20404 -58.86786 -54.69931 -16.78246 -19.34967 -16.37628 -19.21685 -19.21685 -16.97465 -45.41469 -46.44850 -25.13333 -24.49918 205 Iceland, Vatnajökull. M. Luceño 5206ML, 8/VIII/2006. (UPOS1963) Canada, Newfoundland and Labrador, Burnt Island. B. S. Hay 87329, 25/VII/1987. (CAN545627) Canada, Newfoundland and Labrador, Pointe Riche Peninsula. A. Bouchard 91022, 30/VII/1991. (CAN564151) Greenland, Narsarsuaq, Kieqtotsermiat glacier. M. Luceño 9307ML, 16/VIII/2007. (UPOS4512) Iceland, Skaftafell N.P. M. Guzmán s.n., 15/Vlll/2005. (UPOS706) Iceland, My vatnn. G. Kaule s.n., 18/VIII/1970. (M0177749) Iceland, My vatnn. G. Kaule s.n., 9/VIII/1970. (M0177749) Iceland, Dettifoss. M. Guzmán s.n., 22/VIII/2005. (UPOS00707) Iceland, Vik, Drangshliðardalur. M. Luceño 4706ML, 7/VIII/2006. (UPOS1957) Greenland, Ymer Island, Botanikerbugten. T. Sørensen 3087, 17/VIII/1932. (CAN17509) Greenland, Ella Island, Cape Oswald. T. Sørensen 316, 24/VII/1932. (CAN17503) Greenland, Qaleragdlit fjord. M. Luceño 4707ML, 5/VIII/2007. (UPOS4484) KR827080/ KR827125 / KR827175 /- KR827079/ KR827123 / KR827173 / KR827223 -/-/ KR827188 /- KR827090/ KR827134 / KR827184 / KR827233 KR827093/ KR827138 / KR827187 / KR827236 KR827084/-/ KR827179 / KR827227 -/-/KR869806/- -/EU541874/-/- KR827086/ KR827130 / KR827181 / KR827229 KR827074/ KR827119 / KR827168 / KR827219 KR827069/-/ KR827162 / - KR827067/-/ KR827159 / KR827211 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima MAN_1 MAN_2 NOR_1 NOR_2 NOR_3 NOR_4 NUN_1a NUN_1b NUN_2 NWT_1 NWT_2 C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima 64.63998 79.89869 64.31868 63.73333 63.73333 78.21307 71.02708 68.19203 70.23601 57.84694 58.39004 -84.11801 -90.97104 -96.01683 -68.45000 -68.45000 15.66346 -8.39625 13.70330 24.94370 -92.76806 -94.36161 206 Canada, Nunavut, Baker Lake. S. A. Edlund 350, 31/VII/1983. (CAN495360) Canada, Northwest Territories, Axel Heiberg Island. A. E. Porsild 18643, 1/VIII/1953. (CAN223325) Canada, Northwest Territories, Southampton Island. D. K. Brown s.n., 20/VII/1952. (CAN258613) Canada, Nunavut, Baffin Island. S. G. Aiken 86-346, 16/VIII/1986. (CAN518226) Norway, Longyearbyen, Spitzbergen. F. Hörl s.n., 14/VIII/1961. (M0177748) Canada, Nunavut, Baffin Island. S. G. Aiken 86-431, 19/VIII/1986. (CAN518311) Norway, Lofoten Islands. M. Escudero 44ME09. 27/VII/2009. (UPOS s.n.) Norway, Havhestberget, Jan Mayen Island. J. Lid s.n., 10/VIII/1930. (CAN281858) Canada, Manitoba, Wapusk National Park. E. Punter (03-711), 21/VII/2003. (CAN591811) Norway, Lapland, Stabbursnes. M. Luceño 7305ML, 8/VIII/2005. (UPOS00370) Canada, Manitoba, Churchill. H. Doppelbaur 134, 29/VII/1965. (M0177754) KR827063/ KR827109 / KR827156 / KR827207 KR827091/ KR827135 /-/ KR827234 -/ KR827108 / KR827155 / KR827206 KR827085/ KR827129 / KR827180 / KR827228 KR827078/ KR827122 / KR827172 / KR827222 -/-/ KR827189 / KR827237 KR827071/ KR827116 / KR827164 / KR827215 KR827072/ KR827117 / KR827165 / KR827216 KR827068/ KR827114 / KR827161 / KR827213 -/DQ115214/-/- -/ KR827136 / KR827185 / KR827235 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima NWT_3 NWT_4 NWT_5 RUC_1 RUE_1 RUW_1 RUW_2 SAS_1 SWI_1 SWI_2 C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima C. maritima 46.00715 46.52271 59.46133 68.48859 66.28633 72.95000 57.62112 72.00000 69.06200 79.15114 7.74323 9.88484 -109.81917 37.08493 36.80000 121.66667 60.67165 -125.00000 -105.10000 -75.17893 207 Switzerland, Engadine, Punt Muragl. J. Höller s.n., 2/VIII/1965. (M0177741) Switzerland, Zermatt, Trockener Steg. M. Luceño 25ML12 2/2, 11/VIII/2012. (UPOS4997) Canada, Saskatchewan, Lake Athabasca. G. W. Argus 8193, 28/VII/1972. (CAN351228). Canada, Northwest Territories, Banks Island. J. M. Gillett 18833, 25/VII/1981. (CAN464428) Russia, Taymyr. Matveeva et al. s.n. , 15/VII/1965. (CAN327344) Russia, Sakha Republic. A. Tolmatsheur s.n., 25/VII/1956. (CAN256245) Russia, Murmansk Oblast, Murmansk. E. Pobedimova, s.n., 29/VIII/1958. (CAN377158) Russia, Murmansk Oblast, Murmansk. E. Pobedimova s.n. 20/VIII/1958. (M0177753) Canada, Northwest Territories, Ellesmere Island. J. M. Gillett 18344A, 21/VII/1979. (CAN454023) Canada, Northwest Territories, Victoria Island. L. J. Gillespie 1120, 26/VII/1997. (CAN582314) KR827082/ KR827127 / KR827177 / KR827225 KR827075/-/ KR827169 /- KR827083/ KR827128 / KR827178 / KR827226 KR827088/ KR827132 / KR827182 / KR827231 KR827060/ KR827105 / KR827154 / KR827203 -/ KR827118 / KR827166 / KR827217 KR827092/ KR827137 / KR827186 /- KR827087/ KR827131 /-/ KR827230 KR827070/ KR827115 / KR827163 / KR827214 KR827064/ KR827110 /-/ KR827208 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima YUK_2 YUK_3 Not 47.15778 included in molecular analyses Not 58.29501 included in molecular analyses Not 46.50523 included in molecular analyses C. maritima C. maritima C. maritima C. maritima C. maritima YUK_1b C. maritima - 60.73167 61.28698 61.28698 YUK_1a C. maritima 70.67088 WSB_1 C. maritima 11.37101 11.64168 10.58944 - -135.06500 -138.52892 -138.52892 70.13672 208 Italia, Bolzano, Schlernhaus. Thomas et al. s.n., 19/VII/2006. (BOZ-PVASC9171) Sweden, Bohuslän. Skee s.n., 19/VIII/1948. (UPOS s.n.) Russia, Tyumen, Yamal Peninsula. O. Rebristaja s.n., 12/VIII/1983. (E00639424) Canada, Yukon. Kluane Lake. L. P. Bruederle 07142010 02. 14/VII/2010. (COLO s.n.) Canada, Yukon. Kluane Lake. L. P. Bruederle 07142010 01. 14/VII/2010. (COLO s.n.) Canada, Yukon, Kishwoot Island. B. A. Benett 06-033, 3/VII/2006. (CAN589263) Canada, Yukon. Waterway et al. 96.098 (MTMG s.n.) Austria, Tirol, Zams. M. Hellweger s.n. VI/1875. - - - KR827089/ KR827133 / KR827183 / KR827232 -/AY757421/-/- KR827081/ KR827126 / KR827176 / KR827224 KR827065/ KR827111 / KR827157 / KR827209 -/ KR827124 / KR827174 /- Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima Blattner (1999) and White (1990) 52 References 38 0 67.30% 96.60% 90 57 0 60.50% GTR + I (ITS1) / HKY (5.8s) / GTR + G (ITS2) % Identical sites % Pairwise identity Variable characters Parsimony-informative characters Number of informative indels Mean % G+C content Substitution model 209 HKY + I 53.10% 78 97.90% 79.10% 307-547 481-610 Ungapped length range 551 612 45 Starr et al. (2003) External transcribed spacer of ribosomal RNA ETS1f – 18S-R Aligned length (bp) Total number of sequences in the alignment Internal transcribed spacers 1 and 2 and 5.8S ribosomal RNA Description ITS1/ 5.8S/ ITS2 F81 + I 22.00% 2 4 14 98.10% 88.70% 614-639 654 48 Escudero & Luceño (2009) 5′trnKCarexF– 5′trnkCarexR intron of plastid region Complete data set GTR 24.20% 2 9 39 92.30% 56.70% 786-875 878 52 Shaw et al. (2005) Intergenic spacer of plastid region rps16F–rpsR Table S2 Characteristics of the DNA regions sequenced for complete data sets including Carex maritima, related species in section Foetidae and outgroups. Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima 0.335 0.310 0.356 -0.191 0.296 0.219 -0.091 0.295 0.216 0.280 0.275 -0.165 -0.112 -0.179 0.189 -0.133 -0.177 -0.096 -0.177 -0.226 0.121 -0.109 0.252 0.016 -0.272 0.266 0.084 -0.256 -0.058 -0.258 -0.293 -0.268 -0.287 0.151 -0.276 -0.288 -0.253 -0.292 50.35 BIO1 BIO2 BIO3 BIO4 BIO5 BIO6 BIO7 BIO8 BIO9 BIO10 BIO11 BIO12 BIO13 BIO14 BIO15 BIO16 BIO17 BIO18 BIO19 % Variance 22.29 PC2 PC1 14.69 -0.062 -0.210 -0.112 -0.156 0.104 -0.109 -0.153 -0.130 0.108 -0.449 0.119 -0.393 -0.294 0.117 -0.458 -0.285 0.273 -0.029 -0.067 PC3 8.00 0.006 -0.326 -0.008 -0.269 -0.570 -0.014 -0.320 -0.085 0.068 0.182 0.106 0.050 -0.123 0.162 0.082 -0.002 -0.209 -0.484 0.101 PC4 1.88 -0.253 0.292 -0.176 0.089 0.191 -0.172 0.152 -0.073 0.101 -0.059 -0.322 0.467 -0.251 0.156 -0.256 -0.120 -0.193 -0.418 0.049 PC5 1.08 0.027 -0.203 -0.213 0.175 0.430 -0.234 0.219 -0.030 0.015 0.208 0.416 -0.343 0.025 0.004 0.073 0.050 -0.424 -0.248 0.099 PC6 0.84 0.205 -0.229 0.282 -0.184 0.572 0.325 -0.247 0.069 0.013 0.178 -0.355 -0.050 -0.052 0.089 0.085 0.068 0.154 -0.294 0.034 PC7 0.39 0.128 0.013 0.211 -0.225 0.216 0.213 -0.197 0.000 -0.057 -0.217 0.546 0.499 0.011 -0.096 -0.201 -0.031 -0.297 0.104 -0.100 PC8 0.28 -0.322 0.420 0.157 -0.150 0.042 0.152 -0.341 -0.101 0.169 0.081 -0.123 -0.369 -0.022 0.041 0.044 -0.177 -0.464 0.237 0.167 PC9 210 0.12 0.212 -0.505 -0.025 0.124 -0.033 -0.028 0.108 0.149 0.185 -0.212 -0.354 0.130 -0.082 0.127 0.097 -0.261 -0.432 0.373 0.031 PC10 0.04 -0.020 -0.205 0.069 -0.034 -0.087 0.168 0.218 -0.193 0.083 0.486 -0.077 0.019 -0.024 -0.244 -0.644 0.094 -0.017 0.195 0.242 PC11 0.02 0.562 0.240 -0.295 0.029 0.009 -0.284 -0.397 0.187 -0.015 -0.021 -0.090 0.009 0.113 -0.192 -0.174 0.000 -0.004 -0.002 0.420 PC12 0.02 -0.467 -0.250 0.098 0.408 0.003 0.165 -0.187 0.222 -0.048 -0.266 0.053 0.063 0.221 -0.236 -0.012 -0.026 0.082 -0.153 0.467 PC13 0.01 -0.131 -0.055 0.041 0.426 0.016 -0.176 -0.443 0.331 0.009 0.296 0.062 0.038 -0.266 0.197 -0.194 0.230 0.002 0.172 -0.369 PC14 0.00 -0.075 -0.016 0.588 -0.259 0.010 -0.572 0.161 0.176 -0.134 -0.107 -0.025 -0.025 -0.108 0.099 -0.034 0.255 -0.020 0.064 0.272 PC15 0.00 0.158 0.007 0.032 0.334 -0.012 0.140 -0.089 -0.576 -0.400 -0.159 -0.010 0.005 -0.259 0.297 0.060 0.279 -0.050 0.114 0.257 PC16 variables on Carex maritima, C. incurviformis, C. pseudofoetida and C. sajanensis using the reduced data set. 0.00 -0.157 0.004 -0.439 -0.346 0.007 0.308 0.142 0.467 -0.286 -0.046 0.018 -0.044 -0.225 0.223 -0.030 0.286 -0.050 0.133 0.200 PC17 0.00 -0.031 -0.024 0.065 0.000 0.003 -0.078 -0.012 0.087 -0.705 0.269 -0.010 0.011 -0.018 0.010 -0.023 -0.640 0.011 0.006 -0.017 PC18 Table S3 Loadings matrix obtained by the principal components analysis uncorrected by phylogeny of 19 bioclimatic 0.00 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.695 0.664 -0.278 0.000 0.000 0.000 0.000 PC19 100.0 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima -0.191 0.135 0.053 -0.008 -0.241 -0.124 0.017 0.001 -0.072 -0.299 -0.114 -0.611 -0.606 -0.625 0.250 -0.618 -0.619 -0.649 -0.555 0.729 -0.481 0.789 -1.000 -0.211 0.943 -0.980 -0.331 0.875 0.015 0.925 0.791 0.751 0.754 -0.605 0.763 0.762 0.685 0.810 50.35 BIO1 BIO2 BIO3 BIO4 BIO5 BIO6 BIO7 BIO8 BIO9 BIO10 BIO11 BIO12 BIO13 BIO14 BIO15 BIO16 BIO17 BIO18 BIO19 % Varia nce 22.29 PC2 PC1 14.69 0.098 -0.125 0.078 -0.051 -0.060 0.088 -0.083 0.023 -0.356 -0.938 -0.344 -0.840 -0.129 -0.274 -0.934 0.000 -0.188 -0.476 -0.648 PC3 8.00 0.129 -0.225 0.022 -0.046 -0.093 0.016 -0.056 0.002 -0.017 -0.025 0.313 -0.347 0.044 -0.044 0.007 0.000 0.118 0.179 -0.019 PC4 1.88 -0.061 0.150 -0.060 0.109 0.403 -0.065 0.147 -0.004 -0.062 -0.143 0.073 0.015 0.108 -0.124 -0.020 0.000 0.326 0.557 -0.072 PC5 1.08 -0.009 -0.088 -0.151 0.133 0.111 -0.159 0.177 0.001 0.010 0.016 0.001 -0.068 -0.058 0.047 -0.032 0.000 -0.128 -0.274 0.008 PC6 0.84 -0.021 0.084 -0.006 -0.007 -0.429 -0.013 0.014 -0.002 -0.027 -0.067 0.080 0.112 -0.065 0.011 -0.130 0.000 -0.228 -0.281 -0.050 PC7 0.39 -0.046 0.063 0.012 0.011 -0.207 0.004 -0.036 -0.002 0.015 0.058 0.000 -0.213 0.006 0.016 0.049 0.000 -0.190 -0.076 0.035 PC8 0.12 0.043 0.030 -0.028 -0.004 -0.088 -0.031 0.004 -0.003 -0.001 0.002 -0.009 -0.012 0.003 0.005 0.018 0.000 0.132 0.049 0.000 PC10 211 0.28 -0.018 -0.041 -0.024 0.004 -0.381 -0.023 -0.015 0.005 -0.006 -0.020 -0.013 0.032 0.031 -0.023 0.023 0.000 0.019 0.062 0.010 PC9 0.04 0.004 -0.006 0.028 0.018 -0.067 0.028 0.047 -0.003 0.001 0.002 -0.002 0.002 -0.005 0.009 0.010 0.000 0.095 0.073 -0.021 PC11 0.02 0.006 0.000 0.007 0.009 -0.016 0.013 -0.004 -0.002 0.006 0.021 -0.002 0.001 -0.005 -0.016 -0.048 0.000 0.003 0.015 0.043 PC12 0.02 -0.007 0.000 -0.006 -0.007 -0.002 -0.013 -0.004 0.001 0.008 -0.002 0.001 -0.006 -0.010 0.004 -0.015 0.000 0.234 0.095 -0.002 PC13 0.01 0.001 0.000 0.002 0.007 0.004 -0.002 -0.034 0.000 -0.007 -0.025 0.001 0.002 -0.002 0.005 0.007 0.000 0.050 0.009 0.010 PC14 Carex maritima, C. incurviformis, C. pseudofoetida and C. sajanensis using the reduced data set. 0.00 -0.001 0.000 0.002 -0.005 0.001 -0.009 0.027 0.000 -0.006 -0.015 0.000 -0.002 0.000 0.002 0.004 0.000 0.048 -0.005 0.015 PC15 0.00 0.000 0.000 -0.001 0.001 0.000 0.020 0.000 0.000 0.000 0.002 0.000 0.000 0.001 -0.001 0.001 0.000 0.160 -0.024 -0.001 PC16 0.00 0.000 0.000 0.002 0.001 0.000 -0.014 0.000 0.000 0.007 -0.012 0.000 0.000 0.001 -0.001 0.000 0.000 0.024 -0.013 -0.001 PC17 0.00 0.000 0.000 -0.002 0.000 0.000 0.021 0.002 0.000 0.003 -0.010 0.000 -0.001 0.000 0.001 0.001 0.000 -0.047 0.006 0.001 PC18 0.0 0 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 PC1 9 Table S4 Loadings matrix obtained by the principal components analysis corrected by phylogeny of 19 bioclimatic variables on 10 0.0 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima % of Varia nce BIO19 BIO18 BIO17 BIO16 BIO15 BIO14 BIO13 BIO12 BIO11 BIO10 BIO9 BIO8 BIO7 BIO6 BIO5 BIO4 BIO3 BIO2 BIO1 0.341 0.032 0.127 0.554 -0.001 0.178 0.498 0.030 0.458 0.032 -0.012 0.027 -0.063 0.143 0.034 -0.048 0.091 -0.068 0.151 -0.174 0.255 -0.080 -0.268 0.252 0.023 -0.260 -0.159 -0.266 -0.264 -0.251 -0.264 0.202 -0.254 -0.265 -0.249 -0.262 14.7 0.166 -0.258 65.9 PC2 PC1 9.4 0.230 0.272 0.228 0.314 0.296 0.206 0.324 0.263 -0.236 -0.054 -0.220 -0.007 0.220 -0.220 -0.026 0.265 -0.315 -0.046 -0.207 PC3 4.7 0.094 0.060 0.088 0.020 0.113 0.082 0.062 0.053 -0.059 -0.211 -0.008 -0.249 0.093 -0.099 -0.031 -0.014 0.657 0.620 -0.090 PC4 2.3 0.106 -0.088 0.047 -0.068 -0.438 0.016 -0.046 0.007 -0.072 0.249 0.139 -0.640 0.193 -0.083 0.336 0.160 -0.274 0.160 0.004 PC5 1.7 0.046 -0.277 -0.111 0.071 0.732 -0.142 0.088 -0.017 0.099 0.217 0.140 -0.425 -0.073 0.107 0.118 -0.012 0.059 -0.185 0.121 PC6 0.4 -0.090 0.202 -0.219 0.186 0.063 -0.304 0.201 -0.014 0.044 -0.251 0.559 0.016 -0.032 -0.013 -0.141 -0.171 -0.399 0.379 0.014 PC7 0.3 -0.302 0.592 -0.197 0.124 -0.021 -0.298 0.010 -0.022 0.091 0.014 -0.507 -0.290 -0.096 0.133 0.131 -0.113 0.025 -0.027 0.083 PC8 0.2 0.270 -0.403 -0.230 0.331 -0.295 -0.501 0.396 0.122 -0.033 -0.001 -0.218 0.100 0.006 -0.002 0.012 0.041 0.165 -0.056 -0.037 PC9 212 0.1 -0.485 0.143 -0.153 0.192 -0.129 0.070 0.202 -0.061 -0.180 0.162 0.386 -0.035 0.155 -0.173 -0.075 0.279 0.367 -0.351 -0.115 PC10 0.1 -0.491 -0.374 -0.002 0.209 -0.044 0.407 0.303 -0.040 0.138 0.106 -0.270 -0.055 -0.048 -0.011 -0.186 -0.108 -0.187 0.278 0.215 PC11 0.0 0.103 0.040 0.000 0.401 -0.010 -0.128 -0.541 0.150 -0.011 0.355 -0.002 -0.013 0.004 -0.151 -0.480 0.153 0.011 0.125 0.277 PC12 0.0 -0.294 -0.221 0.193 0.465 0.009 -0.023 -0.410 0.290 -0.012 -0.349 0.055 0.011 0.020 0.105 0.406 -0.115 -0.006 -0.065 -0.199 PC13 0.0 0.268 0.039 -0.760 0.197 -0.012 0.485 -0.155 -0.047 -0.067 -0.102 -0.018 0.002 -0.061 0.098 0.129 0.025 -0.004 0.002 -0.052 PC14 0.0 0.058 0.009 -0.073 -0.029 0.009 0.019 -0.005 0.023 0.081 -0.277 -0.015 -0.007 0.494 -0.444 0.104 -0.307 0.050 -0.212 0.559 PC15 0.0 -0.106 -0.029 -0.037 -0.206 -0.001 -0.028 0.048 0.345 -0.335 -0.296 0.024 -0.003 -0.224 0.231 0.049 0.478 -0.008 0.037 0.535 PC16 0.0 0.138 0.022 0.255 0.352 -0.017 0.004 -0.005 -0.773 -0.035 -0.224 -0.004 -0.002 -0.072 0.100 0.100 0.258 0.004 -0.017 0.223 PC17 0.0 0.004 -0.014 0.061 0.048 0.010 -0.001 0.008 -0.107 -0.817 0.187 -0.004 0.001 -0.078 0.078 0.010 -0.512 0.003 0.003 0.074 PC18 0.0 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.677 -0.703 0.216 0.000 0.000 0.000 0.000 PC19 100. 0 Table S5 Loadings matrix obtained by the principal components analysis of 19 bioclimatic variables on Carex maritima full data set. Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima Bioclimatic variable BIO1 BIO2 BIO3 BIO4 BIO5 BIO6 BIO7 BIO8 BIO9 BIO10 BIO11 BIO12 BIO13 BIO14 BIO15 BIO16 BIO17 BIO18 BIO19 213 Description annual mean temperature mean diurnal temperature range [mean of monthly (maximum temperature - minimum temperature)] isothermality (BIO2 / BIO7 x 100) temperature seasonality (standard deviation of monthly temperature) maximum temperature of the coldest month; minimum temperature of the warmest month temperature range (BIO6 - BIO5) mean temperature of the wettest quarter mean temperature of the driest quarter mean temperature of the warmest quarter mean temperature of the coldest quarter annual precipitation precipitation of the wettest month precipitation of the driest month precipitation seasonality (coefficient of variation of monthly precipitation) precipitation of the wettest quarter precipitation of the driest quarter precipitation of the warmest quarter precipitation of the coldest quarter calculated based on K × 10 to deal with negative temperatures) and mm for precipitation. Table S6 Bioclimatic variables used. Units of bioclimatic variables are °C × 10 for temperature (excluding BIO4 which was Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima 0.941 ± 0.002 0.942 ± 0.002 0.997 ± 0.003 C. maritima from both hemispheres C. maritima from Northern Hemisphere C. maritima from Southern Hemisphere AUC ± SD minimum temperature of the warmest month (BIO6) BIO1 Annual mean temperature (BIO1) Environmental variables that contributed most 214 BIO6 BIO1 BIO1 The most important environmental variable when used alone WorldClim database layers and the most important when used alone, for each group of Carex maritima. Table S7 Area under the curve (AUC) ± standard deviation (SD) and the variables that contributed the most to explain MAXENT models under Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima 215 White T.J., Bruns T., Lee S., & Taylor J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications (ed. by M. Innis, D. Gelfand, D. Sninsky and T. White), pp. 315–322. Academic Press, San Diego, CA. Starr J.R., Harris S.A., & Simpson D.A. (2003) Potential of the 5 and 3 ends of intergenic spacer (IGS) of rDNA in the Cyperaceae: new sequences for lower-level phylogenies in sedges with an example from Uncinia Pers. International Journal of Plant Sciences, 164, 213–227. Shaw J., Lickey E.B., Beck J.T., Farmer S.B., Liu W., Miller J., Siripun K.C., Winder C.T., Schilling E.E. & Small R.L. (2005) The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis. American Journal of Botany, 92, 142–166. Escudero M. & Luceño M. (2009) Systematics and evolution of Carex sects. Spirostachyae and Elatae (Cyperaceae). Plant Systematics and Evolution, 279, 163–189. Brummitt R.K. (2001) World geographical scheme for recording plant distributions, 2nd edn. Hunt Institute for Botanical Documentation, Pittsburgh, PA. Blattner F.R. (1999) Direct amplification of the entire ITS region from poorly preserved plant material using recombinant PCR. Biotechniques, 1180–1186. REFERENCES Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima 216 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima components analysis of the full data set (Fig. S5). 217 bioclimatic variables used in MAXENT analyses (Fig. S4); and scatter plot of the three first components from the principal (18–21 ka; MIROC and CCSM models) and Last Interglacial Period (c. 120–140 ka) (Fig. S3); scatter plots of the uncorrelated fitted to current climatic conditions from MAXENT analyses (Fig. S2), and projections of the models to Last Glacial Maximum Appendix S2 Supplementary figures. Distribution map of Carex maritima (Fig. S1); ecological niche models of C. maritima groups Tamara Villaverde, Marcial Escudero, Modesto Luceño and Santiago Martín-Bravo Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction of Carex maritima (Cyperaceae) SUPPORTING INFORMATION Journal of Biogeography Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima 218 and removing duplicate records from the same locality to reduce the effects of spatial autocorrelation. downloaded 22 December 2014) after pruning for likely incorrect identification or georeferencing (e.g. occurrences in oceans) between 1950 and 2000, downloaded from the Global Biodiversity Information Facility data portal (http://www.gbif.org/, Figure S1 Distribution map of Carex maritima (894 preserved specimens) depicted by black circles, obtained from occurrence data Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima (b) (a) 219 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima Hemisphere. 220 Carex maritima; (b) C. maritima populations of the Northern Hemisphere; (c) C. maritima populations of the Southern analyses. Colours correspond to a continuous prediction with values ranging from 0 to 1 (from white to red, respectively). (a) Figure S2 Ecological niche model of Carex maritima groups fitted to current climatic conditions (c. 1950–2000) from MAXENT (c) Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima from 0 to 100 (from blue to red, respectively). 221 shown) and Last Interglacial Period (LIG, c. 120–140 ka). Colours correspond to a continuous prediction with values ranging Hemispheres). MAXENT projections of the model to the Last Glacial Maximum (LGM, 18–21 ka; MIROC and CSSM model Figure S3 Maps of predicted environmental suitability for Carex maritima and population groups (Northern and Southern Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima (a) 222 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima (b) 223 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima 224 warmest month (BIO6); (b) BIO1 and annual precipitation (BIO12); and (c) BIO6 and BIO12. Hemisphere samples (grey and red circles, respectively): (a) annual mean temperature (BIO1) and minimum temperature of the Figure S4 Scatter plots of the uncorrelated bioclimatic variables used in MAXENT analyses of Carex maritima Northern and Southern (c) Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima (a) 225 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima (b) 226 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima 227 and principal component 2 (PC2); (b) PC1 and principal component 3 (PC3); and (c) PC2 and PC3. Carex maritima Northern and Southern Hemisphere samples (grey and red circles, respectively): (a) principal component 1 (PC1) the principal components analysis of the full data set (894 populations) and depicting in a climate-niche space the position of Figure S5 Scatter plots of the first three components explaining up to 90% of the observed variance (see Appendix S1), derived from (c) Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima 228 Chapter 4. Long-distance dispersal during the middle–late Pleistocene explains the bipolar disjunction ________________________________________________________________ ________________________________________________________________ of Carex maritima Chapter 5 Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens (Cyperaceae) 229 230 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens (Cyperaceae) Tamara Villaverdea, Marcial Escuderob,c, Santiago Martín-Bravoa and Modesto Luceñoa a Department of Molecular Biology and Biochemical Engineering, Pablo de Olavide University, Seville, Spain. bDepartment of Integrative Ecology, Estación Biológica de Doñana (EBD-CSIC), Seville, Spain. cDepartment of Plant Biology and Ecology, University of Seville, Seville, Spain. *Correspondence: Tamara Villaverde. Department of Molecular Biology and Biochemical Engineering, Pablo de Olavide University, carretera de Utrera Km 1 sn 41013 Seville, Spain. email: tvilhid@gmail.com 231 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Abstract Aim: To test the various hypotheses accounting for the bipolar disjunction of Carex canescens and to elucidate if it migrated twice to the Southern Hemisphere or if it dispersed from South America to Australia (or vice versa). Location: Arctic/boreal latitudes of both hemispheres. Methods: We obtained and analysed DNA sequences for the nuclear internal and external transcribed spacers (ITS and ETS) and for the plastid 5′ trnK and rps16 introns from 56 populations of C. canescens and 8 populations from its sister species and outgroups. We also climatically characterized the species distribution by adding 1,995 species presence data points from the Global Biodiversity Information Facility and using the climatic information stored in the WorldClim database. Results: Although the internal phylogenetic resolution of C. canescens was poor and populations were embedded in a polytomy independently of their geographical origin, genetic structure was detected between South America and Australia, which did not share any of the sampled haplotypes. The diversification of C. canescens occurred during the Pleistocene (1.17 Ma; 95% HPD 0.34 – 2.17 Ma). Southern Hemisphere populations occupy a more restricted climatic niche than in the Northern Hemisphere but falling within the general ecological conditions tolerated by the species, which seem to be very wide. Main conclusions: Carex canescens dispersed twice from the Northern Hemisphere to South America and Australia. Recent divergence times and the lack of genetic differentiation between disjunct populations did not allow us to discern between direct dispersal and mountain-hopping or a combination of both, to explain the colonization of the Southern Hemisphere. Long-distance dispersal is claimed as a widespread 232 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens phenomenon in bipolar Carex species, possibly facilitated by rare processes or unusual behaviour of vectors. Keywords: Biogeography, climatic niche, Cyperaceae, divergence time estimation, Glareosae, long-distance dispersal. 233 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens INTRODUCTION Interest in establishing the relations between floras in the Southern Hemisphere has been fostered by their similarities with floras of the Northern Hemisphere (e.g., Raven, 1963; Raven, 1972; Wen & Ickert-Bond, 2009; Leslie et al., 2012). Around 75-85% of families present in Tasmania and South America (south of ca. 40º S) also occur in the Northern Hemisphere, whereas ca. 20-27% of the genera are shared between New Zealand-South America and the Northern Hemisphere (Moore, 1972). Plant disjunctions between hemispheres are formidable when species reach very high latitudes at both sides of the Equator, regardless of its occurrence at intermediate latitudes, thus achieving the so-called bipolar distribution (Moore & Chater, 1971). About 30 vascular plant species are known to have such a distribution, which are mainly restricted to alpine and polar regions (Moore & Chater, 1971).Bipolar disjunctions have historically been explained by four hypotheses: (1) vicariance (Du Rietz, 1940), which implies a continuous distribution fragmentation during the Mesozoic Era (Scotese et al., 1988); (2) convergent or parallel evolution of the disjunct populations (Hofsten, 1916; Scotland, 2011); (3) stepwise long-distance dispersal across the Equator via mountain ranges (“mountain-hopping”; Raven, 1963; Moore & Chater, 1971; Ball, 1990; Vollan et al., 2006); and (4) direct long-distance seed dispersal by birds, wind and/or ocean currents (Cruden, 1966; Muñoz et al., 2004; Nathan et al., 2008; Gillespie et al., 2012). The genus Carex L., which consists of c. 2000 species (Reznicek, 1990), has the greatest number of bipolar taxa (6), which generally have a circumboreal distribution and are limited to austral latitudes in South America (>52º). An exception is C. canescens (sect. Glareosae G. Don), the single bipolar Carex species that reaches not only the southernmost region of South America (Tierra del Fuego and Falkland Islands) but also Oceania (including Australia, Tasmania and New Guinea; Fig. 1 and Appendix 234 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens S1), occurring within five biogeographical regions (Nearctic, Palearctic, Andean, Neoguinean and Australotemperate; Morrone, 2002). Carex canescens is therefore the bipolar Carex species with the widest distribution. The great morphological variability within C. canescens across its wide distribution has motivated the description of more than 40 infraspecific taxa, of which only Carex canescens subsp. disjuncta (Fernald) Toivonen (that occurs in eastern North America) and C. canescens var. robustior Blytt ex Andersson (that is distributed in Patagonia and Falkland Islands) are currently accepted (Govaerts et al. 2014). Carex canescens var. robustior is also considered an ecotype of C. canescens from the mountainous regions in North America, but this taxon is not currently accepted in North America (Toivonen, 2002). A morphological study of C. canescens covering its total range found slight differences between Northern and Southern Hemisphere populations, which only deserved varietal recognition (Moore & Chater, 1971). In general, Southern Hemisphere plants tend to be greater than their Northern Hemisphere counterparts for various parts (e.g., stem diameter, leaf size and utricle width), although there is some overlapping (Moore & Chater, 1971). Moore (1972) interpreted that these morphological differences between hemispheres could suggest a transtropical migration in the Americas and subsequent circum-Antarctic dispersal. Nelmes (1951) proposed that C. canescens populations from Malaysia are intermediate forms between Australian and European forms based on the number and conspicuously (or not conspicuously) nerved utricles, and suggested a southward migration and adaptation of southern populations (Moore, 1972). In C. canescens, as well as in other temperate sedges, leaf elongation has been proven to increase with temperature (Heide, 1997, 2000) and might not have a genetic origin. Vollan et al. (2006) analysed samples of C. canescens from Europe (only Norway), South America (Chile) and Australia using amplified fragment 235 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens length polymorphisms (AFLPs) and found genetic differentiation between Northern and Southern Hemisphere populations. They hypothesized a Northern Hemisphere origin and a single colonization of the Southern Hemisphere, followed by secondary dispersal from Australia to South America or vice versa. Escudero et al. (2010a) found that the genetic distance between populations of C. canescens from North and South America was lower than between some populations from the Northern Hemisphere, which could indicate a more recent connection between North America and Patagonia than among some areas of the Northern Hemisphere. However, sampling was limited in both of these studies, including only six or seven populations and lacking samples from North America (Vollan et al., 2006) or Australia (Escudero et al., 2010a). For bipolar Carex species, the vicariance hypothesis (Du Rietz, 1940) is rejected as the origin of the family Cyperaceae (82.6 Ma, 95% highest posterior density: 75.9–85.6 Ma; Escudero & Hipp, 2013) is placed during the Cretaceous, which is well after the fragmentation of the trans-tropical highland bridges that occurred during the Mesozoic Era (195 Ma; Scotese et al., 1988). Here we aimed to: (i) test the various hypotheses accounting for the bipolar disjunction of C. canescens; and (ii) to determine whether C. canescens migrated twice to the Southern Hemisphere or was dispersed from South America to Australia or vice versa. MATERIALS AND METHODS Study species and sampling Carex canescens is distributed in the temperate areas of both hemispheres, with a circumpolar range in the Northern Hemisphere, whereas its range is limited to Patagonia and south-eastern Australia in the Southern Hemisphere (Fig. 1). Potential C. canescens 236 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens herbarium specimens from New Guinea were depauperate and infertile, precluding a confident identification. Carex canescens is a wind-pollinated herbaceous hemicryptophyte that usually grows in persistently wet, base-poor sites (e.g., sphagnum bogs), moist coniferous forests, woodlands, meadows, lakeshores, rivers and other fresh water bodies. We obtained plant material representing the entire range of C. canescens subsp. canescens (58 populations) as circumscribed by Egorova (1999) and Toivonen (2002). We also included one population each of C. canescens subsp. disjuncta (Fernald) Toivonen, C. lachenalii Schkuhr, C. glareosa Schkuhr ex Wahlenb., C. furva Webb and C. arcta Boott from section Glareosae. We use C. macloviana d’Urv., C. maritima Gunn., C. paniculata subsp. paniculata L. and C. remota L. as outgroups (Waterway et al. 2009). For all species one individual per population was sampled. Samples used for the molecular study were obtained from silica-dried leaf material collected in the field and from herbarium specimens (Appendix S1). Vouchers for new collections are deposited in the following herbaria: CAN, SI and UPOS (abbreviation following Index Herbariorum). PCR amplification and sequencing Total DNA was extracted using DNeasy Plant Mini Kit (Qiagen, California). Forward and reverse primers were used for amplifications of the internal transcribed spacer region (ITS: ITS-A, ITS-4; White et al., 1990; Blattner, 1999), external transcribed spacer regions (ETS: ETS-1f, 18S-R; Starr et al., 2003), 5′trnK intron (5′trnKCarexF, 5′trnKCarexR; Escudero & Luceño, 2009) and rps16 intron (rps16F-rps16R; Shaw et al., 2005). Amplifications were obtained in a Perkin Elmer PCR-system 9700 (California) under the conditions specified by Escudero et al. (2010a) for ITS and rps16, Starr et al. (2003) for ETS, and Escudero & Luceño (2009) for 5′trnK intron. 237 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Polymerase chain reaction (PCR) products were cleaned and sequenced following Escudero et al. (2008). Sequences were edited, automatically aligned with MUSCLE (Edgar, 2004) and manually adjusted using GENEIOUS v6.1.7 (Biomatters, Auckland, New Zealand). We coded three informative indels for the 5′trnK region following the simple gap coding method by Simmons & Ochoterena (2000). Phylogenetic analyses We obtained a total of 56 sequences of ITS (six from NCBI GenBank), 41 of ETS (four from NCBI GenBank), 43 of rps16 (two from NCBI GenBank) and 47 of 5′trnK (one from NCBI GenBank; Appendix S1). Each of the four loci was analysed independently and in combination using Maximum Likelihood (ML) and Bayesian inference (BI). The combined nuclear and plastid matrix consisted of 64 combined sequences with 2,635 sites (see Appendix S1). Maximum likelihood and Bayesian analyses were performed as described by Villaverde et al. (2015a). Selected nucleotide substitution models under the Akaike Information Criterion (AIC) in jModeltest (Posada, 2008) were GTR+G for ITS1 and ITS2, HKY for ITS 5.8s; GTR for rps16 and HKY+I for 5′trnK (Appendix S1). Haplotype network and divergence time estimation We obtained the genealogical relationships among ptDNA haplotypes using the plastid combined matrix and statistical parsimony as implemented in TCS v1.21 (Clement et al., 2000) and described in Villaverde et al. (2015a). We estimated completeness of haplotype (5′trnK - rps16) sampling using a Stirling probability distribution, as described by Dixon (2006), which calculates a posterior probability distribution of the total number of haplotypes (sampled or not). 238 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Dated phylogenies were estimated for the nuclear and plastid matrix in BEAST v1.7.5 (Drummond et al., 2012). All phylogenies were estimated using an uncorrelated log-normal relaxed clock model. A normal age prior with a mean of 14.82 million years ago (Ma) ± 2.5 million years (Myr) was applied to the root of the tree based on previous estimates (Escudero & Hipp, 2013). Analyses were conducted using two independent MCMC runs of 40 million generations each, assuming the Birth Death tree prior with a mean substitution rate set at 1.0. Run convergence and burn-in were assessed in TRACER v1.5 (Rambaut & Drummond, 2009). Maximum Clade Credibility (MCC) trees were calculated with TREEANNOTATOR v1.7.2 (Drummond & Rambaut, 2007) using a posterior probability limit of 0.7 and the mean heights option. Climatic environment We obtained values for 19 bioclimatic variables (Appendix S1) as described by Escudero et al. (2013) for each sampled population of C. canescens, except for one population from the USA (Wisconsin) lacking precise geographic coordinates. This data set was completed by adding: (i) five additional populations from Australia for which we failed to amplify any loci (see Appendix S1); (ii) 1,992 species occurrence records originated from herbarium specimens, collected between 1950 and 2014, and downloaded from the Global Biodiversity Information Facility data portal (http://www.gbif.org/, downloaded 12 February 2015). This dataset was refined by removing likely incorrectly identified (e.g., occurrences outside of the distribution range defined by Monocot checklist, Govaerts et al. 2014) or incorrectly georeferenced populations (e.g., occurrences in oceans) and duplicate records from the same locality to reduce the effects of spatial autocorrelation. Our final data set included a total of 2,057 populations (Appendix S2). To characterize its climatic niche space, we performed a 239 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens principal components analysis (PCA) of the climatic dataset using the prcomp function (sdev, rotation, centre and scale options were set as TRUE) in R (R Core Team, 2014). Ecological niche model A species distribution modeling was performed to reconstruct the potential ranges of C. canescens under present clime with MAXENT v3.3.3k (Phillips et al., 2006). We performed a correlation analysis with the Variance Inflation Factor (VIF) using the vif function in the usdm package in R (R Development core Team, 2014) and a correlation threshold of 0.7 (Dormann et al., 2013) . Only three variables were uncorrelated and consequently included in the analyses: bio1 (annual mean temperature), bio6 (minimum temperature of the warmest month) and bio12 (annual precipitation). Replicate runs (500) were performed using the bootstrap run type. Analyses were performed for all populations of C. canescens and separately by Northern and Southern Hemisphere populations, as well as by populations of C. canescens from South America and Australia. We partitioned all the locality data into training and testing data sets (75% vs. 25%, respectively) in order to build niche models and to evaluate the quality of the model. RESULTS Phylogenetic reconstruction Carex section Glareosae was obtained as monophyletic in all the analyses with a strong support (94% BS / 1 PP, Appendix S2). The monophyly of C. canescens was strongly supported (97% BS / 1PP), with the single sampled population of C. canescens subsp. disjuncta retrieved as sister to the remainder of C. canescens subsp. canescens. The 240 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens internal phylogenetic resolution of the species was poor and populations from different hemispheres or continents did not form clades. Most populations were embedded in a polytomy, independently of their geographical origin, with the exception of two samples from South America, which formed a weakly to moderately supported clade (61% BS / 0.84 PP, Appendix S2). Haplotype network The obtained ptDNA (5′trnK-rps16) haplotype network revealed five different haplotypes (H1-H5) and one missing haplotype (Fig. 3). A probability of 95% that all haplotypes have been sampled is given by Dixon’s (2006) method. Haplotype 1 (H1) is shared by 34 samples from Australia, Eurasia and North America, while haplotype 2 (H2), separated by one mutation from H1, is shared by 11 samples from Eurasia, North and South America. There are three haplotypes exclusive to single populations: one from western North America (California; H3), one from South America (Argentina, Santa Cruz; H4) and one from C. canescens subsp. disjuncta from north-eastern North America (Massachusetts; H5). No more than one or two mutations are needed to connect these singletons with H1 or H2 (Fig. 3). A loop connects H1, H2, H4 and the missing haplotype that leads to H5, which reflects ambiguity about the evolutionary history of these haplotypes due to homoplasy. Four of the five haplotypes (H1-H3, H5) were found in North America, whereas two in Eurasia (H1, H2) and South America (H2, H4) and only one in Australia (H1). Interestingly, populations from the Northern Hemisphere shared haplotypes with those from the Southern Hemisphere (H1, H2), whereas different haplotypes were found in Australia (H1) versus South America (H2, H4). 241 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Divergence time estimation The dating analyses produced a congruent topology with respect to the BI and ML analyses presented above (Fig. 2 and Table 1). The divergence time of the clade comprising section Glareosae was 6.55 Ma (95% highest posterior density, HPD, 2.56 – 10.99 Ma), which falls in the Late Miocene - Pliocene. Thus, the diversification of C. canescens could have occurred during the Pleistocene (1.17 Ma; 95% HPD 0.34 – 2.17 Ma). The clade comprised by C. lachenalii and C. glareosa diverged during the same Epoch (1.03 Ma, 95% HPD 0.18 – 2.14 Ma). Climatic environment The PCA of the climatic data set showed that PC1 explained 48.1% of the variance, whereas PC2 and PC3 explained 15.7 and 14.5% respectively (Appendix S1). The variables with the highest loadings in PC1 were annual precipitation (bio12), temperature seasonality (bio4) and precipitation of coldest quarter (bio19; Appendix S1). The scatter plot of the three first components (Fig. 4) is coloured by geographic groups corresponding to: C. canescens samples from North-East (Eurasia), North-West (North America), South-East (Australasia) and South-West (South America) quadrants. Separation between the Northern and Southern Hemisphere samples of C. canescens or between different landmasses within the same hemisphere was not observed (Fig. 4). Present distribution under climatic change scenarios Current conditions Our results show that the modelled ecological niche of C. canescens, including the Northern and Southern Hemisphere samples, predicts suitable areas in both hemispheres. The environmental variable that contributed most to explain the 242 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens MAXENT models under WorldClim database layers and the most important environmental variable when used alone, according to the jack-knife test, was annual mean temperature (bio1). The modelled ecological niche of C. canescens including only the Northern Hemisphere populations predicts suitable habitats also in the Southern Hemisphere (Appendix S2). Values for the area under the curve (AUC) were all above 0.89, which indicate a good fit of the models. The average AUC for each group and the most important environmental variables detected in each analysis are reported in Appendix S1. DISCUSSION Our results show that C. canescens is a monophyletic species, which allows us to strongly reject the convergent or parallel evolution hypotheses for the origin of the bipolar disjunction (Hofsten, 1916; Scotland, 2011), since we would expect two or more lineages of C. canescens with different common ancestors under these hypotheses. Carex canescens diverged from its sister species in section Glareosae 1.17 Ma (95% HPD: 0.34 – 2.17) and the clade formed by only two samples from South America is of recent origin (Fig. 3). In addition, no clear genetic differentiation was found between the other Northern and Southern Hemisphere populations, since they shared haplotypes (H1, H2; Fig. 2), which also points to a rather recent origin of the bipolar disjunction. Therefore, the remaining alternative hypotheses are mountain-hopping through the American Cordillera and Malaysian mountains, direct long-distance dispersal, or a combination of both. Based on our haplotype network (Fig. 2), we cannot infer the direction of dispersal (North-to-South or South-to-North). The haplotype with the highest number of mutational connections (three), which is considered the ancestral haplotype under the 243 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens coalescent theory (Posada & Crandall 2001), comprises populations from Eurasia, North and South America (H2). Nevertheless, the haplotype H1 could also be ancestral, as it is also widely distributed (Eurasia, North America and Australia) and has only one connection less than H2. All 23-25 species of Carex section Glareosae (Maguilla et al., in press), with the exception of C. canescens and C. lachenalii, are exclusively distributed in the Northern Hemisphere, which supports the hypothesis of a northern origin of the species and a subsequent North-to-South direction of dispersal. The same hypothesis is supported by the widespread distribution of C. canescens in the Northern Hemisphere relative to its very restricted distribution in the Southern Hemisphere (Fig. 1). Other works on bipolar taxa (including two examples of bipolar Carex species) have also shown a predominantly southwards colonization route (Gussarova et al., 2008; Popp et al. 2011; Piñeiro et al., 2012; Villaverde et al., 2015a; 2015b). Therefore, we suggest that C. canescens’ distribution is a result of long-distance dispersal from the Northern Hemisphere to the Southern Hemisphere. Not once but twice: the double colonization of the Southern Hemisphere by C. canescens While haplotype sharing was found between Northern and Southern Hemisphere populations, genetic structure was detected between South America and Australia, which did not share any of the sampled haplotypes (Fig. 2). Therefore, we can infer at least two different colonization events of C. canescens from the Northern to the Southern Hemisphere, one to each of these two southern landmasses. When taxa known to have originated from the Northern Hemisphere are distributed in two landmasses within the Southern Hemisphere, it can be either the result of a single colonization of the Southern Hemisphere followed by subsequent dispersal to the other landmass (e.g., 244 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Schuettpelz & Hoot, 2004; Inda et al., 2008; Gussarova et al., 2008; Nie et al., 2012) or of multiple independent dispersals from the Northern Hemisphere (e.g., Yokoyama et al., 2000; Escudero et al., 2009; Schaefer et al., 2009; Emadzade et al. 2011; Banasiak et al., 2013). Two different mountain ranges connect the Northern and Southern Hemispheres, allowing migration of cold-adapted plant species by mountain-hopping. The mountain uplift in Malaysia in the Miocene-Pliocene (10 Ma; Sanmartín & Ronquist, 2004) and the gradually cooler climate in both hemispheres at that time (Scotese, 2002) could have facilitated the dispersal of cold-adapted species into the Southern Hemisphere from Eurasia (Smith, 1981). Similarly, the American cordillera has connected North and South America since the Late Miocene (Smith, 1986) and it has acted as a corridor for the dispersal of different organisms (e.g., Moreno et al., 1994; Antonelli & Sanmartín, 2011). The absence of genetic differentiation between the Southern and the Northern Hemisphere and its diversification time suggest a very recent dispersal of C. canescens to the Southern Hemisphere. The same pattern of genetic similarity between Hemispheres was found in another bipolar Carex species (C. arctogena; Villaverde et al., 2015b), for which direct long-distance dispersal best explains the bipolar disjunction. A different genetic pattern was, however, found for C. maritima (Villaverde et al., 2015a), whose populations from the Southern Hemisphere are genetically distinct from the Northern populations. The obtained results for C. maritima did not allow us to discern between direct long-distance dispersal or mountain hopping. Likewise, we consider that the current study is not conclusive enough to be able to distinguish between mountain-hopping or direct long-distance dispersal to explain C. canescens’ distribution. 245 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens The high colonization capacity and competitiveness of C. canescens None of the six bipolar species in the genus are known to occur in two landmasses within the Southern Hemisphere, as well as the Falkland Islands, New Guinea and Tasmania. The migration to such islands supports the high dispersal and colonization ability of C. canescens, ranked as the bipolar Carex species with the greatest distribution. With the exception of C. microglochin, none of the bipolar Carex species displays standard morphological syndromes for long-distance dispersal (as described by Higgins et al., 2003). Some dispersal agents might have been involved in the distribution of C. canescens, such as birds, ocean or wind currents (Nathan et al., 2008; Gillespie et al. 2012). Rare processes or unusual behaviour of vectors have been inferred to have dispersed seeds over long distances (Higgins & Richardson, 1999; Nathan et al., 2002; Higgins et al., 2003; Nathan et al., 2008). In fact, long-distance dispersal is claimed as a widespread phenomenon in many plant species without standard morphological syndromes for long-distance dispersal (Carlquist, 1967; Cain et al., 2000; Higgins et al., 2003; Alsos et al., 2007; Dixon et al., 2009). Establishment of plants following long-distance dispersal is determined by the environment and biotic conditions of the host community, as well as by the colonization capacity and competitiveness of the new hosted species. Our results show that in the Southern Hemisphere C. canescens occupies a more restricted climatic niche than in the Northern Hemisphere (Fig. 4 and Appendix S2), but falling within the general ecological conditions tolerated by the species, which seem to be very wide (Fig. 4). Furthermore, Carex species are generally highly self-pollinated (Whitkus, 1988; Ohkawa et al., 2000; Arens et al., 2005; Friedman & Barrett, 2009; Escudero et al., 2010b, 2013), which could also explain, at least in part, successful establishment after dispersal (Carlquist, 1983; Baker, 1955). In addition, chromosome rearrangements have 246 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens been shown to be correlated with phenotypic differences, as well as being thought to enhance fitness in different habitats (Coghlan et al., 2005). Specifically, high chromosome number evolution is a result of: (i) selection by climatic regime and ecological strategies; and (ii) neutral processes such as phylogenetic inertia or migration processes (Escudero et al., 2012, 2013). The high chromosome number variation in C. canescens (2n = 52-54, 56-58, 60, 62; reviewed in Roalson et al., 2008) might also be a result of the influence of the climatic environments at different latitudes and distant regions. CONCLUSIONS Our results suggest that C. canescens originated during the Pleistocene and that its disjunction could be explained by long-distance dispersal from the Northern to the Southern Hemisphere. Carex canescens could have dispersed at least twice to the Southern Hemisphere, once to Australia and once to South America, either by mountain-hopping through the Andes cordillera and Malaysian mountains, by direct jump or by a combination of both. ACKNOWLEDGEMENTS The authors thank to all staff from herbaria CAN, COLO, E, M, MSB, SI, UPOS and WIN for granting us access to their collections and for providing plant material, E. Maguilla (Universidad Pablo de Olavide, UPO) and F. Rodríguez-Sánchez (Estación Biológica de Doñana, EBD-CSIC) for his help with MAXENT analyses, map editing and valuable comments on the manuscript, M. Puscas (Babes-Bolyai University) for plant material collections, L. P. Bruederle (University of Colorado, Denver) and P. Vargas (Real Jardín Botánico de Madrid) for assistance in plant collections, and M. 247 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Míguez and F. J. Fernández (UPOS) for technical support. This research was supported by the Spanish Ministry of Science and Technology through the project CGL201238744 and from the Regional Ministry of Economy, Innovation, Science and Employment of Andalusia through the project RNM-2763. REFERENCES Alsos, I.G., Eidesen, P.B., Ehrich, D., Skrede, I., Westergaard, K., Jacobsen, G.H., Landvik, J.Y., Taberlet, P. & Brochmann, C. (2007) Frequent long-distance plant colonization in the changing Arctic. Science, 316, 1606–1609. Antonelli, A. & Sanmartín, I. (2011) Mass Extinction, gradual cooling, or rapid radiation? Reconstructing the spatiotemporal evolution of the ancient angiosperm genus Hedyosmum (Chloranthaceae) using empirical and simulated approaches. Systematic Biology, 60, 596–615. Arens, P., Bijlsma, R.-J., Van't Westende, W., Van Os, B., Smulders, M.J.M. & Vosman, B. (2005) Genetic structure in populations of an ancient woodland sedge, Carex sylvatica Hudson, at a regional and local scale. Plant Biology, 7, 387–396. Baker, H.G. (1955) Self-compatibility and establishment after 'long-distance' dispersal. Evolution, 9, 347–349. Ball, P.W. (1990) Some aspects of the phytogeography of Carex. Canadian Journal of Botany, 68, 1462–1472. Banasiak, Ł., Piwczyński, M., Uliński, T., Downie, S.R., Watson, M.F., Shakya, B. & Spalik, K. (2013). Dispersal patterns in space and time: a case study of Apiaceae subfamily Apioideae. Journal of Biogeography, 40, 1324–1335. Blattner, F.R. (1999) Direct amplification of the entire ITS region from poorly preserved plant material using recombinant PCR. Biotechniques, 27, 1180–1186. Brummitt, R.K. (2001) World geographical scheme for recording plant distributions, 2nd ed. Hunt Institute for Botanical Documentation, Pittsburgh, Pennsylvania, USA. Cain, M.L., Milligan, B.G. & Strand, A.E. (2000) Long-distance seed dispersal in plant populations. American Journal of Botany, 87, 1217–1227. Carlquist, S. (1967) The biota of long-distance dispersal. V. Plant dispersal to Pacific Islands. Bulletin of the Torrey Botanical Club, 94, 129–162. 248 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Carlquist, S. (1983) Intercontinental dispersal. Sonderband der Naturwissenschaftliche Verhandlungen Hamburg, 7, 37–47. Chater, A.O. (1980) Carex. In: Tutin, T.G., Heywood, V.H., Borges, N.A., Moore, D.M., Valentine, D.H., Walters, S.M., Webb, D.A. (Eds.), Flora Europaea, vol. 5. Cambridge University Press, Cambridge, pp. 290–302. Clement, M., Posada, D. & Crandall, K. (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657–1660. Coghlan, A., Eichler, E.E., Oliver, S.G., Paterson, A.H. & Stein, L. (2005) Chromosome evolution in eukaryotes: A multi-kingdom perspective. Trends in Genetics, 21, 673–682. Cruden, R.W. (1966) Birds as agents of long-distance dispersal for disjunct plant groups of the temperate Western Hemisphere. Evolution, 20, 517–532. Dixon, C. (2006) A means of estimating the completeness of haplotype sampling using the Stirling probability distribution. Molecular Ecology Notes, 6, 650–652. Dixon, C.J., Schönswetter, P., Vargas, P., Ertl, S. & Schneeweiss, G.M. (2009) Bayesian hypothesis testing supports long-distance Pleistocene migrations in a European high mountain plant (Androsace vitaliana, Primulaceae). Molecular Phylogenetics and Evolution, 53, 580–591. Dormann, C.F., Elith, J., Bacher, S., Buchmann, C., Carl, G., Carré, G., Marquéz, J.R.G., Gruber, B., Lafourcade, B., Leitão, P.J., Münkemüller, T., Mcclean, C., Osborne, P.E., Reineking, B., Schröder, B., Skidmore, A.K., Zurell, D. & Lautenbach, S. (2013) Collinearity: A review of methods to deal with it and a simulation study evaluating their performance. Ecography, 36, 27–46. Drummond, A.J. & Rambaut, A. (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology, 7, 214. Drummond, A.J., Suchard, M.A., Xie, D. & Rambaut, A. (2012) Bayesian phylogenetics with BEAUti and the BEAST 1.7. Molecular Biology and Evolution, 29, 1969–1973. Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Resources, 32, 1792–1797. Egorova T.V. (1999) The sedges (Carex L.) of Russia and adjacent states (within the limits of the former USSR). St. Petersburg State Chemical-Pharmaceutical Academy, Missouri Botanical Garden Press, St. Petersburg; St. Louis Mo. Emadzade, K., Gehrke, B., Linder, P.H. & Hörandl, E. (2011) The biogeographical history of the cosmopolitan genus Ranunculus L. (Ranunculaceae) in the temperate to meridional zones. Molecular Phylogenetics and Evolution, 58, 4–21. 249 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Escudero, M. & Hipp, A. (2013) Shifts in diversification rates and clade ages explain species richness in higher-level sedge taxa (Cyperaceae). American Journal of Botany, 100, 1–9. Escudero, M. & Luceño, M. (2009) Systematics and evolution of Carex sects. Spirostachyae and Elatae (Cyperaceae). Plant Systematics and Evolution, 279, 163–189. Escudero, M., Maguilla, E. & Luceño, M. (2013) Selection by climatic regime and neutral evolutionary processes in holocentric chromosomes (Carex gr. laevigata: Cyperaceae): A microevolutionary approach. Perspectives in Plant Ecology, Evolution and Systematics, 15, 118–129. Escudero, M., Valcárcel, V., Vargas, P. & Luceño, M. (2008) Evolution in Carex L. sect. Spirostachyae (Cyperaceae): A molecular and cytogenetic approach. Organisms, Diversity and Evolution, 7, 271–291. Escudero, M., Valcárcel, V., Vargas, P. & Luceño, M. (2009) Significance of ecological vicariance and long-distance dispersal in the diversification of Carex sect. Spirostachyae (Cyperaceae). American Journal of Botany, 96, 2100–2114. Escudero, M., Valcárcel, V., Vargas, P. & Luceño, M. (2010a) Bipolar disjunctions in Carex: Long-distance dispersal, vicariance, or parallel evolution? Flora, 205, 118–127. Escudero, M., Vargas, P., Arens, P., Ouborg, N.J. & Luceño, M. (2010b) The east-westnorth colonization history of the Mediterranean and Europe by the coastal plant Carex extensa (Cyperaceae). Molecular Ecology, 19, 352–370. Friedman, J. & Barrett, S.C.H. (2009) The consequences of monoecy and protogyny for mating in wind-pollinated Carex. New Phytologist, 181, 489–497. Gillespie, R.G., Baldwin, B.G., Waters, J.M., Fraser, C.I., Nikula, R. & Roderick, G.K. (2012) Long-distance dispersal: a framework for hypothesis testing. Trends in Ecology and Evolution, 27, 47–56. Govaerts, R., Koopman, J., Simpson, D., Goetghebeur, P., Wilson, K., Egorova, T. & Bruhl, J. (2014) World Checklist of Cyperaceae. Facilitated by the Royal Botanic Gardens, Kew. Published on the Internet; http://apps.kew.org/wcsp/ (Retrieved 2014-11-28). Gussarova, G., Popp, M., Vitek, E. & Brochmann, C. (2008) Molecular phylogeny and biogeography of the bipolar Euphrasia (Orobanchaceae): recent radiations in an old genus. Molecular Phylogenetics and Evolution, 48, 444–460. Heide, O.M. (1997) Environmental control of flowering in some northern Carex species. Annals of Botany, 79, 319–327. 250 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Heide, O.M. (2002) Climatic flowering requirements of bipolar sedges Carex spp. and the feasibility of their trans-equatorial migration by mountain-hopping. Oikos, 99, 352–362. Higgins, S.I., Nathan, R. & Cain, M.L. (2003) Are long-distance dispersal events in plants usually caused by nonstandard means of dispersal? Ecology, 84, 1945– 1956. Higgins, S.I. & Richardson, D.M. (1999) Predicting plant migration rates in a changing world: the role of long-distance dispersal. American Naturalist, 153, 464–475. von Hofsten, N. (1916) Zur älteren Geschichte des Diskontinuitätsproblems in der Biogeographie. Zoologische Annalen, 7, 197–353. Inda, L.A., Segarra-Moragues, J.G., Müller, J., Peterson, P.M. & Catalán, P. (2008) Dated historical biogeography of the temperate Loliinae (Poaceae, Pooideae) grasses in the northern and southern hemispheres. Molecular Phylogenetics and Evolution, 46, 932–957. Leslie, A.B., Beaulieu, J.M., Rai, H.S., Crane, P.R., Donoghue, M.J. & Mathews, S. (2012) Hemisphere-scale differences in conifer evolutionary dynamics. Proceedings of the National Academy of Sciences of the United States of America, 109, 16217–16721. Maguilla, E., Escudero, M. Waterway, M.J., Hipp, E. & Luceño, M. (2015) Phylogeny, systematics and trait evolution of Carex section Glareosae (Cyperaceae). American Journal of Botany, in press. Moore, D.M. & Chater, A.O. (1971) Studies on bipolar species I. Carex. Botanical Notiser, 124, 317–334. Moore, D.M. (1972) Connections between cool temperate floras, with particular reference to Southern South America. In: Valentine, D. H. ed(s). Taxonomy, Phytogeography and Evolution, pp. 115–138. Moreno, P.I., Villagran, C., Marquet, P.A. & Marshall, L.G. (1994) Quaternary paleobiogeography of northern and central Chile. Revista Chilena de Historia Natural, 67, 487–502. Morrone, J.J. (2002) Biogeographical regions under track and cladistic scrutiny. Journal of Biogeography, 29, 149-152. Muñoz, J., Felicísimo, A.M., Cabezas, F., Burgaz, A.R. & Martínez, I. (2004) Wind as a long-distance dispersal vehicle in the Southern Hemisphere. Science, 304, 1144– 1147. Nathan, R., Leng, Q., Katul, G.G., Horn, H.S., Thomas, S.M., Oren, R., Avissar, R., Pacala, S.W. & Levin, S.A. (2002) Mechanisms of long-distance dispersal of seeds by wind. Nature, 418, 409–414. 251 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Nathan, R., Schurr, F.M., Spiegel, O., Steinitz, O., Trakhtenbrot, A. & Tsoar, A. (2008) Mechanisms of long-distance seed dispersal. Trends in Ecology and Evolution, 23, 638–647. Nelmes, E. (1951) The genus Carex in Malaysia. In: Reinwardtia, Vol. 1, Part 3, pp. 221-450. Bogor, Java, Archipel. Nie, Z.-L., Sun, H., Manchester, S.R., Meng, Y., Luke, Q. & Wen, J. (2012) Evolution of the intercontinental disjunctions in six continents in the Ampelopsis clade of the grape family (Vitaceae). BMC Evolutionary Biology, 12, 17. Ohkawa, T., Yokota, M. & Hoshino, T. (2000) Aneuploidal population differentiation in Carex sociata Boott (Cyperaceae) of the Ryukyu Islands, Japan. Botanical Journal of the Linnean Society, 132, 337–358. Piñeiro, R., Popp, M., Hassel, K., Listl, D., Westergaard, K.B., Flatberg, K.I., Stenøien, H.K. & Brochmann, C. (2012) Circumarctic dispersal and long-distance colonization of South America: the moss genus Cinclidium. Journal of Biogeography, 39, 2041–2051. Phillips, S.J., Anderson, R.P. & Schapire, R.E. (2006) Maximum entropy modeling of species geographic distributions. Ecology Modelling, 190, 231–259. Popp, M., Mirré, V. & Brochmann, C. (2011). A single Mid-Pleistocene long-distance dispersal by a bird can explain the extreme bipolar disjunction in crowberries (Empetrum). Proceedings of the National Academy of Sciences of the United States of America, 108, 6520–6525. Posada, D. (2008) jModelTest: Phylogenetic model averaging. Molecular Biology and Evolution, 25, 1253–1256. Posada, D. & Crandall, K. (2001) Intraspecific gene genealogies: trees grafting into networks. Trends in Ecology and Evolution, 1, 37–45. R Core Team (2014) R: a language and environment for statistical computing. Version 3.1.1. Available at: http://www.r-project.org. Rambaut, A. & Drummond, A.J. (2009) Tracer v1.5. Available from BEAST. Software website: http://tree.bio.ed.ac.uk/software/ tracer/. Raven, P.H. (1963) Amphitropical relationships in the floras of North and South America. The Quarterly Review of Biology, 38, 151–177. Raven, P.H. (1972) Plant species distributions: a summary. Annals of the Missouri Botanical Garden, 18, 245–282. Reznicek, A.A. (1990) Evolution in sedges (Carex, Cyperaceae). Canadian Journal of Botany, 68, 1409–1432. 252 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Du Rietz, G.E. (1940) Problems of the bipolar plant distribution. Phytogeographica Suecica, 13, 215–282. Acta Roalson, E.H. (2008) A synopsis of chromosome number variation in the Cyperaceae. Botanical Review, 74, 209–393. Sanmartín, I. & Ronquist, F. (2004) Southern hemisphere biogeography inferred by event-based models: plant versus animal patterns. Systematic Biology, 53, 216– 243. Schaefer, H., Heibl, C. & Renner, S.S. (2009) Gourds afloat: a dated phylogeny reveals an Asian origin of the gourd family (Cucurbitaceae) and numerous oversea dispersal events. Proceedings of the Royal Society of London, Series B, Biological Sciences, 276, 843–851. Schuettpelz, E. & Hoot, S.B. (2004) Phylogeny and biogeography of Caltha (Ranunculaceae) based on chloroplast and nuclear DNA Sequences. American Journal of Botany, 91, 247–253. Scotese, C.R. (2002). http://www.scotese.com, (PALEOMAP website). Scotese, C., Gahagan, L. & Larson, R. (1988) Plate tectonic reconstructions of the Cretaceous and Cenozoic ocean basins. Tectonophysics, 155, 27–48. Scotland, R.W. (2011) What is parallelism? Evolution and Development, 13, 214–227. Shaw, J., Lickey, E.B., Beck, J.T., Farmer, S.B., Liu, W., Miller, J., Siripun, K.C., Winder, C.T., Schilling, E.E. & Small, R.L. (2005) The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis. American Journal of Botany, 92, 142–166. Simmons, M.P. & Ochoterena, H. (2000) Gaps as characters in sequence-based phylogenetic analyses. Systematic Biology, 49, 369–381. Smith, J.M.B. (1981) Colonist ability, altitudinal range and origins of the flora of Mt Field, Tasmania. Journal of Biogeography, 8, 249–261. Smith, J.M.B. (1986) Origins of the Australasian tropicalpine floras. In: Barlow, B.A. (ed.) Flora and Fauna of alpine Australasia: ages and origins. Commonwealth Scientific and Industrial Research Organization CSIRO, Melbourne, Australia. Starr, J.R., Harris, S.A. & Simpson, D.A. (2003) Potential of the 5 and 3 ends of intergenic spacer (IGS) of rDNA in the Cyperaceae: new sequences for lowerlevel phylogenies in sedges with an example from Uncinia Pers. International Journal of Plant Sciences, 164, 213–227. Toivonen, H. (2002) Carex L. sect. Glareosae G. Don. (Cyperaceae). In: Flora of North America North of Mexico, Vol. 23 (ed. by the Flora of North America Editorial Committee) pp. 311–321. New York and Oxford, UK. 253 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Villaverde, T., Escudero, M., Luceño, M. & Martín-Bravo, S. (2015a) Long-distance dispersal during the Middle-Late Pleistocene explains the bipolar disjunction of Carex maritima (Cyperaceae). Journal of Biogeography, in press. Villaverde, T., Escudero, M., Martín-Bravo, S., Bruederle, L.P., Luceño, M. & Starr, J.R. (2015b) Direct long-distance dispersal best explains the bipolar distribution of Carex arctogena (Carex sect. Capituligerae, Cyperaceae). Journal of Biogeography, in press. DOI: 10.1111/jbi.12521. Vollan, K., Heide, O.M., Lye, K.A., Heun, M., 2006. Genetic variation, taxonomy and mountain-hopping of four bipolar Carex species (Cyperaceae) analysed by AFLP fingerprinting. Aust. J. Bot. 54, 305–313. Waterway, M.J., Hoshino, T. & Masaki, T. (2009) Phylogeny, Species Richness, and Ecological Specialization in Cyperaceae Tribe Cariceae. Botanical Review, 75, 138–159. Wen, J. & Ickert-Bond, S.M. (2009) Evolution of the Madrean-Tethyan disjunctions and the North and South American amphitropical disjunctions in plants. Journal of Systematics and Evolution, 47, 331–348. White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: A guide to methods and applications (ed. by M. Innis, D. Gelfand, D. Sninsky, and T. White), Academic Press, Orlando, Florida, pp. 315–322. Whitkus, R. (1988) Experimental hybridizations among chromosome races of Carex pachystachya and the related species C. macloviana and C. preslii (Cyperaceae). Systematic Botany, 13, 146–153. Yokoyama, J., Suzuki, M., Iwatsuki, K. & Hasebe, M. (2000) Molecular phylogeny of Coriaria, with special emphasis on the disjunct distribution. Molecular Phylogenetics and Evolution, 14, 11–19. SUPPORTING INFORMATION Additional Supporting Information may be found in the online version of this article: Appendix S1 Studied material of Carex canesens, related species and outgroups; molecular characteristics of the amplified regions; results from the principal components analysis of 19 bioclimatic variables from the WorldClim database; description of bioclimatic variables; and AUC values from MAXENT analyses. Appendix S2 Distribution map of Carex canescens, phylogeny of C. canescens, boxplots of the most important variables from bioclimatic principal component analyses and ecological niche models of C. canescens. 254 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens BIOSKETCH Tamara Villaverde is a PhD student at Pablo de Olavide University, Seville (Spain). Her research is focused on the evolution and phylogeography of angiosperms, with special interest in the systematics and biogeography of the genus Carex (Cyperaceae). Author contributions: M.E. and M.L. conceived the idea; T.V., S.M-B and M.L. collected the plant material; T.V., M.E. and S.M-B, carried out the lab work and analysed the data; T.V., M.E. and S.M-B led the writing and drafted the manuscript, although all authors contributed to its preparation. 255 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens Table 1. Divergence dates of clades in Carex section Glareosae. Divergence dates of clades in Carex section Glareosae presented as the posterior probability followed by the mean time to the most recent common ancestor in million years ago (Ma) and the 95% HPD interval obtained from the divergence time analysis of the combined nuclear (ITS and ETS) and plastid (5’trnK intron and rps16) regions. Clade Section Glareosae C. furva + C. lachenalii + C. glareosa + C. canescens C. lachenalii + C. glareosa C. canescens C. canescens from South America (2 populations) 256 Posterior Probability 0.99 Mean (Ma) 6.55 Min (Ma) 2.56 Max (Ma) 10.99 0.98 5.5 1.84 9.17 1 1 1.03 1.17 0.18 0.34 2.14 2.17 0.85 0.05 0 0.17 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens LISTS OF FIGURE LEGENDS Figure 1. Distribution map of the sampled populations of C. canescens. The shaded region denotes the distribution of C. canescens obtained from the World Checklist of Cyperaceae (Govaerts et al., 2014). Figure 2. Maximum credibility clade phylogeny of the Bayesian divergence time analysis considering Carex canescens, other related species in sect. Glareosae and outgroups using a combined matrix of nuclear (ITS and ETS) and plastid (5’trnK and rps16) sequences. Node bars represent the 95% highest posterior density intervals of the divergence time estimates linked to nodes with posterior probabilities above 0.85 (values above branches) with mean ages inferred for clades in million years (below branches). Light grey rectangle depicts C. canescens populations from Northern and Southern Hemisphere; dark grey rectangle depicts two populations of C. canescens from Argentina. Figure 3. Haplotype network of concatenated cpDNA sequences of Carex canescens and C. canescens subsp. disjuncta. Circles represent the five haplotypes found (H1-H5), lines represent single mutational steps, and small black circles missing haplotypes. Number of samples per haplotype are indicated in parentheses and abbreviations after the names correspond to the geographical regions of the world (Brummitt, 2001). Figure 4. Scatter plots of the first three components of the Principal components analysis depicting the position in a climate-niche space of the Carex canescens sampled populations geographically grouped by Earth’s quadrants (North-East, grey dots; North-West, pink; South-East, blue; South-West, red). 257 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens 258 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens 259 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ ________________________________________________________________ Carex bipolar species: biogeography of C. canescens 260 variables; and AUC values from MAXENT analyses. 261 results from the Principal Components Analysis of 19 bioclimatic variables from the WorldClim database; description of bioclimatic Appendix S1. Studied material of Carex canesens, related species and outgroups; molecular characteristics of the amplified regions; Tamara Villaverde, Marcial Escudero, Santiago Martín-Bravo and Modesto Luceño of C. canescens (Cyperaceae) Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography SUPPORTING INFORMATION Journal of Biogeography Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ 262 Table S.1: List of material studied of species from sect. Glareosae (Carex canescens, C. canescens subsp. disjuncta, C. glareosa, C. lachenalii, C. furva, C. arcta) and the outgroups (C. macloviana, C. paniculata subsp. paniculata, C. remota and C. maritima) including population code, coordinates, voucher information and Genbank accessions for markers used for molecular studies. Population codes correspond to geographical regions of the world (Brummitt, 2001) and population number. Species Population Latitude Longitude Voucher Genbank Accesion code (ITS, ETS, 5’trnK intron and rps16 intron) C. canescens AGS_1 -50.483197 -72.874399 Argentina: Santa Cruz, Los Glaciares Forthcoming National Park. 20-I-2010. J. Starr P14-4 10018 & T. Villaverde (UPOS3935) C. canescens AGS_2 -49.205715 -72.955547 Argentina: Santa Cruz, Los Glaciares Forthcoming National Park. 21-I-2010. J. Starr 10022/ P18-1 & T. Villaverde (UPOS3939) C. canescens AGS_3 -42.97121 -71.582108 Argentina: Chubut, Los Alerces National Forthcoming Park. 31-I-2010. J. Starr P24-1 10029 & T. Villaverde (UPOS3946) C. canescens AGS_4 -54.8333333 -68.5 Argentina: Tierra del Fuego, Ushuaia, Tierra Forthcoming del Fuego National Park. 08-I-2010. S. Martín-Bravo 7SMB10, P. Vargas & M. Luceño (UPOS4237) C. canescens AGS_5 -41.2579 -71.679915 Argentina: Río Negro, Nahuel Huapi Forthcoming National Park. 2-II-2010. J. Starr JS10032 P27-8 & T. Villaverde (UPOS3947) C. canescens AGS_6 -54.132279 -68.068818 Argentina: Tierra del Fuego, Río Grande, Forthcoming Ona River. 17-I-2010. S. Martín-Bravo 49SMB10, P. Vargas, M. González & M. Luceño (UPOS4282) C. canescens AGS_7 -54.793811 -67.642027 Argentina: Tierra del Fuego, between Forthcoming Ushuaia and Tolhuin, Rancho Hambre. 9-I2010. S. Martín-Bravo 15SMB10, P. Vargas, Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ ASK_1 AUT_1 BEL_1 BUL_1 CAL_1 CHM_1 CLS_1 CLS_2 C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens -54.140305 -53.395722 43.913021 38.8715 42.081017 50.253394 47.220106 62.322317 -68.845772 -71.126564 125.736503 -120.113116 23.903942 6.120001 11.629783 -150.094549 263 Chile: Region XII of Magallanes and Chilean Antarctic, Brunswick Peninsula, gate of Laguna Parrilar Forest Reserve. J. Starr P13-7 10017 & T. Villaverde (UPOS3934) Chile: Region XII of Magallanes and Chilean Antarctic, Big Island of Tierra del Fuego. 27-XII-2005. M. Luceño 17905ML USA: Alaska, Alaska Range District, Peters Hills Mountains. 17-VII-1980. V. Siplivinsky 666 (CAN453336) Austria: Tirol, Ötztaler Alpen, Sölden. 11VII-1993. E. Vitek 33-11, A. Blab & G. Dietrich (NSW815997) Belgium: Hohes-Vann Park, between Eupen and Mönschav. 29-VI-2008. S. MartínBravo 88SMB08 & M. Escudero (UPOS3458) Bulgary: Rhodopians, between Belovo and Jakoruda. 9-VII-2010. P. Jiménez-Mejías 147PJM10, R. Jiménez Mejías & S. Jiménez Mejías (UPOS4087) USA: California, El Dorado Co, El Dorado National Forest, Grass Lake. 23-VII-1987. J. Pykälä, D. H. Norris & H. Toivoinen 2922 (BM s.n.) China: Jilin. J. Jung 1007076 (AJOU) M. González & M. Luceño (UPOS4245) EU541865(ITS), Forthcoming, Forthcoming JX644817 Forthcoming Forthcoming Forthcoming Forthcoming Forthcoming Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ FIN_1 GER_1 GNL_1 GNL_2 GNL_3 ICE_1 IRK_1 IRK_2 C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens 13.557863 24.486169 -46.613291 -44.336017 51.723501 57.16667 103.341859 104.55 65.02468333 -19.1181972 60.947449 60.003958 66.98333333 -52.3166667 51.764009 67.906062 GQ469855 (trnk), EU541836 (rps16), EU541867(ITS) Forthcoming, Forthcoming Forthcoming Forthcoming Forthcoming EU541833 (rps16), Forthcoming, EU541834 (rps16), 264 Russia: Siberia, Region of Lake Baikal, Forthcoming Valley of Korolok. 7-VII-1979. H. H. Iltis, J. C. Coffey & M. F. Denton 504 (NYBG s.n.) Russia: Irkutskaya oblast, Valley of Forthcoming Bystraya River, west end of Lake Baikal. 14VII-1979. H. H. Iltis, J. C. Coffey & M. F. Denton 833 (NYBG s.n.) Finland: Pallas-Ounastunturi National Park. 4-VIII-2005. M. Luceño 2005ML & M. Guzmán (UPOS314) Germany: Brandenburg. VI-1903. R. Gross s.n. (NSW816004) Denmark: Greenland, Ikertoq, Maligiaq, Itivneq. 26-27-VII-1978. C. Bay 78-1623, B. Fredskild, S. Hanfgarn & P. F. Moller (CAN488181) Denmark: Greenland, Qassiarsuk, Tassiussaq fjord. 4-VIII-2007. M. Luceño 3207ML & M. Guzmán (UPOS4471) Denmark: Greenland, Qaleragdlit fjord. 5VIII-2007. M. Luceño 4407ML & M. Guzmán (UPOS4481) Iceland: between Storaborg and Mosfell. 6VIII-2006. M. Luceño 3206ML (UPOS1941) & R. Álvarez (UPOS0212) Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ KAM_1 KAM_2 KRA_1 LAB_1 MAS_1 NFL_1 NFL_2 NOR_1 NSW C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens 159.116506 265 Russia: Kamchatka Peninsula, Pacific Ocean coast, SE of Nalychevo. 29-VII-2003. A. Farjon & G. Frisor 653 (E00270618) 55.913997 158.649107 Russia: Kamchatka Peninsula, Bristraya River, Esso. 23-VII-2003. R. K. Brummitt & G. Frisor 20883 (E00270610) 56.908423 96.518853 Russia: Krasnoyarsk Territory, Abansky District. 27-VII-1960. Pavlova & T. Litvin (NYBG s.n.) 53.06666667 -66.9666667 Canada: Newfoundland and Labrador, Carol Lake, North end. 17-IX-1953. F. Harper 4031 (CAN226641) 41.678902 -70.489216 USA: Massachusetts, Sandwich, Boggy swale. 8-VI-1932. C. A. Weatherby, U. F. Weatherby, L. B. Smith & R. C. Smith s.n. (NSW815995) 53.051214 -57.446935 Canada: Newfoundland and Labrador. Route 13 before Trans-Labrador (Hwy 510). 24VII-2008. R. Piñeiro 80RPP08 & M. Escudero (UPOS s.n.) 51.421133 -55.616348 Canada: Newfoundland and Labrador, Strait of Belle District, on road to Goose Cove. 19VIII-1992. A. Bouchard 92389, S. Hay & L. Brouillet (CAN566828) 68.160421 13.749333 Norway: Lofoten Islands, Kallen, Kabelvag, Svolvaer. 29-VII-2009. M. Escudero 61ME09, R. Piñeiro & M. Pimentel (UPOS s.n.) -36.3 148.3833333 Australia: New South Wales, Kosciuszko National Park, Schlink Pass. 14-II-1985. K. L. Wilson 6151 (NSW259564) 53.133376 - Forthcoming Forthcoming Forthcoming Forthcoming Forthcoming Forthcoming Forthcoming Forthcoming Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ NSW NSW NSW_1 NSW_2 NSW_3 NWT_1 NWT_2 QUE_1 ROM_1 SCO_1 C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens 56.366423 45.602362 -3.217611 24.61413 148.35 266 Romania: Carpathians, Fagaras Mountains, Bâle Lake. 20-VII-2013. M. Puscas s.n. (CL s.n.) United Kingdom: Scotland, Perth. Glen Girnaig. Altt na Core Lagain. 12-VII-1989. A. C. Jermy 277960700 (BM18314) Australia: New South Wales, Kosciuszko National Park, near Spencer Creek. 23-I1975. G. Thompson 2260 (NSW656969) -36.4163889 148.4027778 Australia: New South Wales, Kosciuszko National Park, Blue Cow. 28-I-1977. G. Thompson 2714. (NSW656966) -36.432601 148.274963 Australia: New South Wales, Kosciusko, Karlway Morraine Creek, Mount Northcott. 15-II-1970. C. Totterdell 73 (CANB343808) -36.431037 148.33854 Australia: New South Wales, Kangaroo Range, Charlotte. Pass to Kosciusko. 27-II1960. A. Gray 772 (CANB76959) -36.501272 148.501272 Australia: New South Wales, Kosciusko, Lower Twyneham Cirque. 11-II-1962. Walker ANU-189 (CANB104756) 63.29613889 -129.831917 Canada: Northwest Territories, Canol Road (Hwy 5), MacMillan Pass. 17-VII- 2004. P. M. Peterson 18645, J. M. Saarela & S. F. Smith. (CAN590896) 64.900522 -125.571633 Canada: Northwest Terriotories, Mackenzie District, Fort Norman. 21-VII-1951. A. A. Lindsey 365a (CAN216063) 46.15153889 -74.5848694 Canada, Quebec. 4-VIII-1997. A. Bond s.n. (MTMG s.n.) -36.4166667 Forthcoming Forthcoming AY757406 (ITS), AY757384 (ETS) Forthcoming Forthcoming Forthcoming Forthcoming Forthcoming - - Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ SCO_2 SPA_1 SPA_2 SPA_3 SWE_1 SWE_2 TCS_1 TCS_2 UTA_1 VIC C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens C. canescens -36.851064 40.807997 39.680281 40.515209 58.67097 67.835408 42.242064 41.817486 42.323944 56.670389 147.343468 -109.511629 45.731723 44.184896 16.938393 67.835408 -6.795057 0.639162 -3.534748 -5.23363 267 United Kingdom: Scotland, Highlands between Tynohumy and Glencoe. 25-VI2007. S. Martín-Bravo 140SMB07, P. Jiménez-Mejías & M. Luceño (UPOS s.n.) Spain: Burgos. Neila, Ducks Lagoon. 19VII-2000. M. Luceño 44000ML & J. Martín (UPOS0087) Spain: Lérida, Baños de Tredos. 2-VIII-2004 J. M. Marín 7604JMM, M. Luceño & L. E. Bendrell (UPOS s.n.) Spain: Zamora, Peña Trevinca, Laguna de Cubillas. 28-VII-2007. S. Martín-Bravo 152SMB07, P. Jiménez-Mejías & I. Pulgar (UPOS s.n.) Sweden: Torne Lappmark, Jukkasjarvi. 22VII-1946. E. Nyholm s.n. (UPOS s.n.) Sweden: Buskhyttan, Närke. 23-VI-1949. G. Kjellmert s.n. (UPOS s.n.) Armenia: Mt. Aragats, Aragatsotn, Aragats. 28-VI-2008. G. Fayuush et al. 08-1381 (NYBG s.n.) Armenia: Sgunik Province, between Sisian and Yerevan, Ughedzor Pass. 16-VI-2007. Oganesian et al. 07-0725 (NYBG s.n.) USA: Utah, Daggett County, Green Lake. 3VI-1986. V. E. McNeilus s.n. (NSW815990) Australia: Victoria, Alpine National Park, Mt Nelse. 13-I-1982. S. J. Forbes 783, R. Adair & M. Gray. (NSW657404). - Forthcoming Forthcoming Forthcoming Forthcoming Forthcoming Forthcoming Forthcoming EU541835 (rps16) Forthcoming, Forthcoming Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ - - - C. lachenalli C. furva C. arcta - - - - - -135.790132 C. glareosa MAS_1 63.805779 22.324799 - YUK_1 C. canescens 42.709597 - - YUG_1 C. canescens - 148.313587 - WIN_1 C. canescens -36.405835 146.273161 - VIC_1 C. canescens -37.846463 C. canescens subsp. disjuncta C. glareosa VIC C. canescens 268 Australia: Victoria, Baw Baw Mount. 22-I1969. A. S. Johnson. (NSW143407) Australia: Victoria, Snowfields, Bogong High Plains. 18-I-1988. N. G. Walsh 1939, P. S. Short & M. C. Looker (UPOS005029) USA: Wisconsin. Hipp et al. 587 (WIS s.n.). Unpublished. Serbia: Rhodopians, Vlasina Lake, Vlasinsko Jezero. 20-VI-2010. P. JiménezMejías 80PJM10, R. Jiménez & S. Jiménez (UPOS4722) Canada: Yukon, Vicinity of Halfway Lake, North of Mayo. 29-VI-1967. R. T. Porsild 639 (CAN312366) USA: Massachusetts, Berkshire County, Thomas Pond. 9-VI-2001. T. M. Zebryk 7312 (NSW815989) United States: Alaska, Bethel. Parker 17823 (MOR) Iceland: Djúpivogur, Berufjördur. 9-VIII2006. M. Luceño & M. Guzman 7206ML (UPOS1983) Norway: Kvaenangsfjellet. 6-VIII-2005. M. Luceño & M. Guzman, 5305ML (UPOS354) Spain: Granada, Capileira, Sierra Nevada National Park. 08/VIII/2013. E. Maguilla & J. M. G. Cobos 31EMS13(1) (UPOS5132) USA: Minnesota, Clearwater County, along County Route 39. 22-VI-1991. V. E. McNeilus 91-565 (NSW815988) Forthcoming KP980522 (ITS), KP980331 (ETS) EU541869 (ITS) EU541871 (ITS) JN903115 (ETS) Forthcoming Forthcoming Forthcoming DQ460952 (ETS) Forthcoming - Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ - - - C.maritima - - - C. paniculata subsp. paniculata C. remota - - C. macloviana C. macloviana 269 Chile: between Punta Arenas and Puerto Natales. 29-XII-2005. M. Luceño & R. Alvarez 18605ML (UPOS1804) Unitated States: Wyoming. A. L. Hipp, Hipp 1893 (WIS) Greece, Épiro, Ioannina, Kambos Despoti. 23-VI-2008. M. Luceño 0808ML (UPOS3419) Montenegro, High Dinarics, Durmitor National Park. 17-VII-2010. P. JiménezMejías 198PJM10 (UPOS4006) Switzerland: Zermatt. 11-VIII-2012. M. Luceño & M. Guzmán 25ML12 2/2 (UPOS4997) Forthcoming Forthcoming KP980427 (ITS), KP980240 (ETS) DQ460993 EU541862 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ 28 0 53.50% 613 505-610 45.3% 94.2% 55 39 0 58.40% GRT+G / HKY / GTR + G Aligned length (bp) Ungapped length range % Identical sites % Pairwise identity Variable characters Parsimony-informative characters Number of informative indels Mean % G+C content Substitution model 270 HKY + I 69 98.3% 79.6% 214-557 560 41 56 Total number of sequences in the alignment Starr et al. (2003) External transcribed spacer of ribosomal RNA Blattner (1999), White (1990) Internal transcribed spacers 1 and 2 and 5.8S ribosomal RNA ETS1f - 18S-R References Description ITS1/ 5.8S/ ITS2 JC + I 21.70% 3 5 11 97.6% 61.5% 439-646 659 Escudero & Luceño (2009) 47 Plastid intergenic spacer 5'trnKCarexF5'trnkCarexR GTR 25.30% 0 13 21 91.5% 91.5% 422-796 801 Oxelman et al. (1997) 43 Plastid intergenic spacer rps16F-rpsR Table S.2: Characteristics of the DNA regions sequenced for the complete datasets including Carex canescens, related species in section Glareosae and outrgroups. Complete dataset Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ % BIO19 BIO18 BIO17 BIO16 BIO15 BIO14 BIO13 BIO12 BIO11 BIO10 BIO9 BIO8 BIO7 BIO6 BIO5 BIO4 BIO3 BIO2 BIO1 0.0 0.0 0.1 0.1 0.0 0.1 -0.3 -0.3 -0.2 -0.3 15.7% 0.1 -0.3 48.1% 0.0 0.0 -0.3 -0.2 -0.3 -0.3 -0.2 -0.5 0.0 -0.2 0.2 -0.3 -0.1 -0.1 0.3 -0.5 0.1 -0.3 -0.2 0.0 -0.3 0.2 0.3 -0.4 -0.2 -0.2 PC2 PC1 14.6% 0.2 0.3 0.2 0.3 0.2 0.2 0.3 0.3 -0.2 0.1 -0.1 0.0 0.3 -0.3 0.2 0.3 -0.1 0.2 -0.1 PC3 10.5% -0.2 0.3 0.2 -0.1 -0.4 0.3 -0.1 0.0 0.0 0.2 -0.2 0.3 0.0 0.0 0.0 0.1 -0.4 -0.3 0.1 PC4 5.5% 0.0 -0.1 0.3 -0.2 -0.6 0.3 -0.2 0.0 -0.1 0.0 0.1 -0.4 0.2 -0.2 0.1 0.1 0.2 0.4 -0.1 PC5 3.0% 0.3 -0.4 0.0 0.0 0.0 0.0 0.0 0.0 -0.1 0.2 0.2 -0.4 0.1 0.0 0.1 0.2 -0.6 -0.3 0.0 PC6 1.2% 0.5 -0.5 0.0 0.1 -0.4 0.0 0.1 0.1 -0.1 -0.1 -0.3 0.5 0.0 0.0 0.0 0.0 0.1 0.0 -0.1 PC7 0.6% 0.0 0.1 -0.2 0.1 -0.2 -0.3 0.1 0.0 0.1 0.1 -0.7 -0.5 0.0 0.1 0.1 -0.1 0.1 -0.1 0.2 PC8 0.4% 0.0 -0.3 0.4 -0.2 0.4 0.4 -0.2 0.0 0.0 0.2 -0.4 -0.1 -0.1 0.0 -0.1 0.1 0.3 -0.2 0.1 PC9 271 0.2% 0.1 -0.1 0.2 -0.1 0.2 0.1 0.0 0.0 0.2 -0.3 -0.2 0.0 -0.1 0.1 0.1 -0.4 -0.5 0.5 0.0 PC10 0.1% 0.6 0.3 0.0 -0.2 0.1 -0.1 -0.6 0.1 -0.1 -0.1 0.0 0.0 -0.1 0.2 0.2 0.1 0.0 -0.1 -0.2 PC11 0.1% 0.2 0.1 0.0 0.0 0.0 -0.1 -0.2 0.0 0.1 0.1 0.0 0.0 0.1 -0.4 -0.6 0.0 -0.1 0.2 0.6 PC12 0.0% -0.3 -0.1 0.6 0.0 0.0 -0.6 -0.1 0.4 0.0 0.0 0.0 0.0 0.0 0.1 0.0 0.1 0.0 0.0 0.0 PC13 0.0% 0.2 0.1 0.2 -0.5 0.0 -0.2 0.5 -0.4 0.0 0.2 0.0 0.0 -0.2 0.1 -0.2 0.1 0.0 0.2 -0.2 PC14 0.0% 0.1 0.1 0.2 -0.3 0.0 -0.1 0.2 -0.2 0.0 -0.3 0.0 0.0 0.4 -0.3 0.4 -0.4 0.1 -0.3 0.2 PC15 0.0% 0.0 0.0 -0.3 -0.5 0.0 0.1 0.1 0.6 0.2 0.2 0.0 0.0 0.1 -0.1 0.0 -0.2 0.0 0.0 -0.2 PC16 0.0% 0.0 0.0 -0.2 -0.3 0.0 0.1 0.2 0.2 -0.4 -0.4 0.0 0.0 -0.2 0.3 0.1 0.3 0.0 0.1 0.5 PC17 0.0% 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 -0.7 0.3 0.0 0.0 -0.1 0.1 0.0 -0.6 0.0 0.1 0.0 PC18 Table S.3: Loadings matrix obtained by the Principal Components Analysis of 19 bioclimatic variables on Carex canescens and the percentage of variance explained by each principal component. 0.0% 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.7 0.6 -0.3 0.0 0.0 0.0 0.0 PC19 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ Bioclimatic variable BIO 1 BIO 2 BIO 3 BIO 4 BIO 5 BIO 6 BIO 7 BIO 8 BIO 9 BIO 10 BIO 11 BIO 12 BIO 13 BIO 14 BIO 15 BIO 16 BIO 17 BIO 18 BIO 19 272 Description annual mean temperature mean diurnal temperature range [mean of monthly (maximum temperature - minimum temperature)] isothermality (BIO2 / BIO7 x 100) temperature seasonality (standard deviation of monthly temperature) maximum temperature of the coldest month; minimum temperature of the warmest month temperature range (BIO6 - BIO5) mean temperature of the wettest quarter mean temperature of the driest quarter mean temperature of the warmest quarter mean temperature of the coldest quarter annual precipitation precipitation of the wettest month precipitation of the driest month precipitation seasonality (coefficient of variation of monthly precipitation) precipitation of the wettest quarter precipitation of the driest quarter precipitation of the warmest quarter precipitation of the coldest quarter Table S.4: Bioclimatic variables used. Units of bioclimatic variables are °C × 10 for temperature (excluding BIO 4 that was calculated based on K × 10 to deal with negative temperatures) and mm for precipitation. Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ BIO6 BIO6 0.890 ± 0.001 0.891 ± 0.001 0.992 ± 0.002 0.996 ± 0.001 0.995 ± 0.002 All samples Samples from the Northern Hemisphere Samples from the Southern Hemisphere Samples from the Southern Hemisphere – only South American Samples from the Southern Hemisphere – only Australasian BIO6 BIO1 AUC ± SD C. canescens groups Environmental variables that contributed most and the most important environmental variable when used alone BIO1 Table S.5: Area under de curve (AUC) ± standard deviation (SD) and the variables that contributed the most to explain MAXENT models under WorldClim database layers and the most important when used alone analyses, for each group of Carex canescens. 273 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ 274 White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: A guide to methods and applications (ed. by M. Innis, D. Gelfand, D. Sninsky, and T. White), Academic Press, Orlando, Florida, pp. 315–322. Starr, J.R., Harris, S.A. & Simpson, D.A. (2003) Potential of the 5 and 3 ends of intergenic spacer (IGS) of rDNA in the Cyperaceae: new sequences for lower-level phylogenies in sedges with an example from Uncinia Pers. International Journal of Plant Sciences, 164, 213–227. Escudero, M. & Luceño, M. (2009) Systematics and evolution of Carex sects. Spirostachyae and Elatae (Cyperaceae). Plant Systematics and Evolution, 279, 163–189. Brummitt R.K. (2001) World geographical scheme for recording plant distributions, 2nd ed. Hunt Institute for Botanical Documentation, Pittsburgh, Pennsylvania, USA. Blattner, F.R. (1999) Direct amplification of the entire ITS region from poorly preserved plant material using recombinant PCR. Biotechniques, 27, 1180–1186. References Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ Journal of Biogeography SUPPORTING INFORMATION Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens (Cyperaceae) Tamara Villaverde, Marcial Escudero, Santiago Martín-Bravo and Modesto Luceño Appendix S2. Distribution map of Carex canescens, phylogeny of C. canescens, boxplots of the most important variables from the bioclimatic PCA and ecological niche models of Carex canescens. Figure S.1. Distribution map of the sampled populations of C. canescens obtained from Global Biodiversity Information Facility data portal (http://www.gbif.org/, downloaded 12 February 2015; black dots). The grey region denotes the distribution of C. canescens obtained from the World Checklist of Cyperaceae (Govaerts et al., 2014). Figure S.2. Majority rule (50%) consensus tree derived from the Bayesian analysis of Carex canescens and the related species in sect. Glareosae inferred from the combined nuclear (ITS and ETS) and plastid (5’trnK and rps16) matrix. Carex macloviana, C. remota, and C. paniculata were used as outgroups. Numbers above and below of the branches represent the Bayesian posterior probability (>0.9 PP) and bootstrap (>60% BS) values of the Maximum likelihood analysis, respectively. A grey rectangle highlights the C. canescens samples of the Southern Hemisphere. Abbreviations after the names correspond to the geographical regions of the world (Brummitt, 2001) and to the population number. 275 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ Figure S.3. Boxplots of the most important variables in principal components analysis using populations from the Northern Hemisphere (NH), Australia (SH_AU) and South America (SH_SA) obtained from Global Biodiversity Information Facility data portal (http://www.gbif.org/, downloaded 12 February 2015). Figure S.4. Ecological niche models of Carex canescens geographic groups. Projections of the model to the current climatic conditions (~1950–2000). Colours correspond to habitat suitability with values ranging from 0 to 1 (from white to red, respectively). (a) C. canescens; (b) C. canescens populations from the Northern Hemisphere; (c) C. canescens populations from the Southern Hemisphere. 276 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread ________________________________________________________________ Carex ________________________________________________________________ bipolar species: biogeography of C. canescens 277 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ 278 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ 279 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ 280 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ 281 Chapter 5. Two independent dispersals to the Southern Hemisphere to become the most widespread Carex bipolar species: biogeography of C. canescens ________________________________________________________________ ________________________________________________________________ References Brummitt, R.K. (2001) World geographical scheme for recording plant distributions, 2nd ed. Hunt Institute for Botanical Documentation, Pittsburgh, Pennsylvania, USA. Govaerts, R., Koopman, J., Simpson, D., Goetghebeur, P., Wilson, K., Egorova, T. & Bruhl, J. (2014) World Checklist of Cyperaceae. Facilitated by the Royal Botanic Gardens, Kew. Published on the Internet; http://apps.kew.org/wcsp/ (Retrieved 2014-11-28). 282 Chapter 6 General discussion and conclusions 283 284 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Carex arctogena is a bipolar species Carex capitata and C. arcotgena are found to be morphologically different and populations from South America correspond to C. arctogena. Therefore, Carex antarctogena should be treated as a synonym of C. arctogena. Morphological variability, which also corresponds with geographical distribution and ecological differentiation (Chapters 2 and 3), was found within populations from western North America and we suggest the description of one species and two subspecies: Carex cayouetteana, C. cayouetteana subsp. bajasierra and C. cayouetteana subsp. altasierra. These three new taxa diverged during the Pleistocene [0.81 million years ago (Ma); 95% highest posterior density (HPD). 0.19- 1.66 Ma], a time of climatic changes in the Northern Hemisphere that affected plant distributions in both North America and Eurasia (e.g. Tremblay & Schoen, 1999; Abbott et al., 2000; Alsos et al., 2005; Eidesen et al., 2007). Contrary to what might have happened in Europe, where mountain chains are East-West oriented, the advance and the retreat of the ice sheet during glacial periods could have had a less severe effect shifting species distribution in latitude during climate changes, due to the continuous mountains chains in a North-South direction (Albach et al., 2006) and to the vast area available below the ice sheet in North America. Carex cayouetteana subsp. bajasierra might have adapted to boreal habitats where it occurs now, whilst Carex cayouetteana subsp. altasierra might have been isolated in tundra habitats in southern California. Population fragmentation during glacial periods may have led to the formation of new species (Abbott & Brochmann, 2003) and their small population sizes could have led to the 285 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions acquisition of morphological traits at a faster rate than in large populations (Vanderpoorten & Shaw, 2010). A similar pattern appears to have occurred in the C. aquatilis Wahlenb. C. lenticularis Michx. group (section Phagocystis, Dragon & Barrington, (2009) where species ecological specialization and the Quaternary geological history of North America, split the group in different lineages The lack of unique characters in chloroplast data set of the new taxa here described could be due to insufficient phylogenetic signal or incomplete lineage sorting, as suggested for other Carex species (e.g. Hipp et al., 2006; King & Roalson, 2008; Roalson & Friar, 2008). Likewise, a multidisciplinary study of the C. backii complex (sect. Phyllostachyae), revealed that it was composed by three different species (Saarela & Ford, 2001), C. saximontana Mack., C. cordillerana Saarela & Ford and C. latebracteata Waterf. Although all quantitative characters measured in the morphological study of C. saximontana, C. cordillerana overlapped, anatomic, micromorphologic and phytogeographic characters showed enough differences to recognize the three taxa at the species level which was later supported by molecular studies (Ford et al., 2009). As the three new taxa here described are not part of independent lineages, we suggest that studies at the population level could help to reveal its genetic differentiation. Long-distance dispersal as the main factor underlying bipolar disjunctions in Carex Two hypotheses can be clearly rejected for all bipolar Carex species: vicariance and convergent evolution. The vicariance hypothesis can be rejected because the fragmentation of the trans-tropical highland bridges during the Mesozoic Era (from the early Jurassic, 195 286 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Ma; Scotese et al., 1988; Figure 3 in Chapter 1) is older than the time of divergence of the Cyperaceae family (82.6 Ma, 95% highest posterior density, HPD: 75.9–85.6 Ma; Escudero & Hipp, 2013). Therefore, bipolar disjunctions in Carex are not due to vicariance as the result of area fragmentation. Moreover, the same reasoning may be applied for all the remaining bipolar species, as the divergence time estimations for their respective families are younger than the early Jurassic (see Table 1), except for Huperzia selago, which its family (Lycopodiaceae) diverged during the late Devonian – early Carboniferous (329.1 – 372.9 Ma). 287 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Table 1. Divergence time estimated for the families including bipolar species and corresponding reference. Family Lycopodiaceae Epoch Late Devonian – Early Carboniferous (329,1 – 372,9 Ma) Hymenophyllaceae Middle Jurassic (ca. 155,5 – 191,7 Ma) Polygonaceae Early to late Cretaceous (ca. 103,1– 125,0 Ma) Caryophyllaceae Early Cretaceous ( 111– 104 Ma) Reference Wikström & Kenrick (2001) Ranunculaceae Late Jurassic - Early Cretaceous (131– 147 Ma) Wikström et al. (2001); Zeng et al. (2014) Plantaginaceae Miocene (7 – 11 Ma) Li et al. (2014) Plumbaginaceae Lledó et al., 2005 Gentianaceae Pliocene - Quaternary (5 - 2,5 Ma) Late Cretaceous (83– 89 Ma) Scrophulariaceae Miocene (ca. 10 Ma) Verboom et al. (2009) Juncaginaceae Miocene (ca. 10 Ma) Janssen & Bremer (2004); von Mering, (2013) Poaceae Early Cretaceous (113– 117 Ma) Janssen & Bremer (2004) Cyperaceae Late Cretaceous (65.5–55.8 Ma) Escudero & Hipp (2013) Hennequin et al. (2008) Schuster et al. (2013) Winkstrom et al. (2001); Zeng et al. (2014) Wikström et al. (2001); Zeng et al. (2014) All Carex bipolar species share an immediate common ancestor for Northern and Southern Hemispheres populations (Escudero et al., 2010a). Carex microglochin was retrieved as polyphyletic in nuclear and plastid analyses (Escudero et al., 2010): two samples from Chile appeared together with C. pulicaris and C. macrostyla in a strongly supported and phylogenetically distant clade from the remaining five samples (Iceland, Norway, Greenland), which grouped with Uncinia lechleriana, C. pauciflora, and C. curvula. Carex microglochin samples from the Northern and Southern Hemisphere were also studied by 288 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Starr et al. (2008) and were retrieved as polyphyletic too, which leaded these authors to the conclusion that it may be a consequence of hybridization, pseudogenes, or other factors. Later on, it has been known that those populations from Chile were misidentified samples of C. camptoglochin V. I. Krecz. (M. Luceño, personal communication). Carex microglochin and C. camptoglochin differ both morphologically and ecologically, growing sympatrically in both the northern and southern parts of South America, but C. camptoglochin is restricted to South America and therefore is not a bipolar species (Wheeler & Guaglianone, 2003). Therefore, we can reject the convergent evolution hypothesis for all Carex bipolar species. From the results of our work, the only hypothesis that cannot be rejected for any of the bipolar Carex species is long-distance dispersal. Although long-distance dispersal hypohtesis is not falsifiable for any taxon (i.e. distribution of all species could be explained by dispersal), studies with phylogenetic reconstruction coupled with divergence time estimation analyses have indicated that long-distance dispersal has played a major role in shaping species distributions with respect to what previously thought (de Queiroz, 2005; Michalak et al., 2010; Renner et al., 2010). Even traditional, paradigmatic examples of taxa with a vicariant distribution, such as Araucaria or Nothofagus have been demonstrated achieved part of its distribution by long-distance dispersal (Swenson et al., 2001; Cook & Crisp, 2005). Therefore, although long-distance dispersal hypothesis is not rejectable, vicariance hypothesis can be falsified and thus, dispersal would be support by default (de Queiroz, 2005). Many studies comparing multiple taxa do not support vicariance hypothesis for their disjunct distributions but dispersal [e.g. in South Africa (Galley & 289 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Linder, 2006); in New Zealand (Winkworth et al., 2005; Waters & Craw, 2006); in Madagascar (Yoder and Nowak, 2006)]. Long-distance dispersal may have been either achieved by mountain-hopping (‘stepping stones’) or by a direct event (a ‘giant leap’). This could have occurred during some of the last cold periods at the end of the Pliocene (5.3 – 2.6 Ma) or in the Pleistocene (2.6 – 0.01 Ma), when the polar regions in both hemispheres recurrently expanded (Raven, 1963; Ball, 1990), or even at present times. Divergence times of the clades where the bipolar species studied by us are found fall in the late Miocene to early Pleistocene in C. arctogena (5 Ma; 95% HPD: 2.01 – 8.03 Ma); middle–late Pliocene to early–middle Pleistocene in C. maritima (0.23 Ma; 95% HPD: 0.03– 0.51 Ma); and during the Pleistocene in C. canescens (1.17 Ma; 95% HPD: 0.34– 2.17 Ma; Figure 1). These ages are therefore embraced within periods in which major climatic changes expanded polar regions in both hemispheres. 290 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Figure 1. Combined maximum-credibility-clade partial phylogenies from the Bayesian divergence-time analysis of the studied Carex bipolar species (see Chapters 3, 4 and 5 for details). Node bars represent the 95% highest posterior density intervals for the divergencetime estimates of nodes and vertical color bars highlight these intervals for species divergence ages (C. arctogena, blue; C. canescens, green; and C. maritima, yellow). 291 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Geological and climatic changes since the Miocene that allowed Northern and Southern Hemisphere connections for bipolar species Since the late Cenozoic, and particularly since the Miocene (23 Ma) the climate has suffered significant variations related to various causes such as continental displacement due to plate tectonics, modification on the concentration of greenhouse gases in the lower atmosphere and changes in astronomical parameters (e.g. eccentricity of the Earth orbit, obliquity of the planetary axis and equinoctial precession; Rabassa et al., 2005). All these changes led to climatic cycles of cold and warm periods and the development of planetary ice ages since the Miocene (Rabassa et al., 2005; Rabassa & Coronato, 2009). Geologically, different uplifts occurred since the Miocene. In Australasia, there is a system of island arcs that goes from the eastern side of Australia to northern Australia and New Guinea and links the southwestern Pacific region with Indonesia. These mountain belts are the result of multiple collisions during the last 40 (million years) My, and particularly during the last 25 My, and created a range of ca. 15.000 km with summits well above 4000 m (Figure. 2; Audley-Charles, 1991). 292 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Figure 2. Island-arc systems linked to New Guinea and associated basins. Abbreviation: S.F.Z., Sorong fault zone. Figure taken from Audley-Charles (1991). In South America, the uplift of the central Andes (Earth’s second largest mountain belt) is the result of an oceanic lithosphere subducted beneath continental lithosphere that started its uplift 70-50 Ma (McQuarrie et al., 2005). In this area, there is the drained Altiplano basin flanked by the Western and Eastern Cordilleras, with peak elevations exceeding 6000 m. Since the beginning of the Miocene (23 Ma), the uplift of the Andes changed dramatically the South American continent (e.g. it formed the only barrier to atmospheric circulation in the Southern Hemisphere; Lenters et al., 1995). The central Andean plateau probably started its elevation 20 Ma (McQuarrie et al., 2005), during the early Miocene, at an age that coincides with the diversification of the first montane plant and animal genera (reviewed in Hoorn et al., 2010). Sedimentology and carbon istoypes in the Altiplano and 293 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Eastern Cordillera suggest that the central Altiplano became more arid 10-6 Mya (middlelate Miocene, Quade et al., 2007), and it correspond to a time when the plateau experienced other uplifts (Garzione et al., 2008; Hoorn et al., 2010; Figure 3-F). During this time, an extensive migration occurred (known as the Great American Biotic Interchange, GABI) and the new montane habitats in the Andes were colonized by taxa from North America (Hoorn et al., 201). Therefore, since the divergence of the bipolar species studied, there have been different mountain ranges allowing the connection between the Northern and Southern Hemisphere. 294 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Figure 3. Paleogeographic maps from 65 to < 2.5 Mya (modified from Hoorn et al., 2010). (A) Amazonia once extended over most of northern South America. Breakup of the Pacific plates changed the geography and the Andes started uplifting. (B) The Andes continued to rise with the main drainage toward the northwest. (C) Mountain building in the Central and Northern Andes (ca. 12 Ma). (D) Uplifts of the Northern Andes. (E) Closing of Panama Isthmus and start of GABI. (F) Quaternary. 295 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Direct long-distance dispersal vs. mountain-hopping Since the Miocene, the Earth has been going through several ice ages that might have affected plant distributions. Two different mountain ranges connect the Northern and Southern Hemispheres, allowing migration of cold-adapted plant species by mountainhopping. First, a route connecting North and South America through the American cordillera has been in place since the late Miocene (ca. 12 Ma; Smith, 1986). Then, a gradual uplift of the cordillera during the late Pliocene created the high mountainous environment with a much colder climate later on during the Pleistocene compared to that incident today at the same latitudes and elevations (van der Hammen, 1974). This route has acted as a corridor for the dispersal of different organisms (e.g. Moreno et al., 1994; Antonelli & Sanmartín, 2011). Second, the mountain uplift in Malaysia in the MiocenePliocene (10 Ma; Sanmartín & Ronquist, 2004) and the gradually cooler climate in both hemispheres at that time (Scotese, 2004) could have facilitated the dispersal of coldadapted species into the Southern Hemisphere (Smith, 1981). For Carex species, no ecophysiological adaptations to cross the short-day conditions of the tropical alpine environment seem to be necessary (Heide, 2002), but we are not aware of any published fossil records or any other evidence for the occurrence of C. arctogena, C. canescens or C. maritima in many vast areas between northern North America and southern South America, or between Eurasia and Australia. If C. arctogena or C. canescens had migrated to South America and/or Australia by the slow and gradual means predicted by mountain-hopping, we would expect that such a process would have left a trace of genetic differences in the plastid loci of populations from both hemispheres (Brochmann et al., 2003; Scotland, 2011). Although we cannot completely reject the mountain-hopping 296 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions hypothesis, the absence of genetic variability between populations of C. arctogena and C. canescens from both hemispheres and their recent diversification times fit better with a recent and direct long-distance dispersal. In congruence, direct long-distance dispersal has been shown to be remarkably frequent in some other species of Cyperaceae (e.g. Viljoen et al., 2013). In the case of C. maritima, its genetic structure allows us to support both a direct longdistance dispersal or mountain-hopping. In the case of direct long-distance dispersal to the Southern Hemisphere, it might be an older event of dispersal than in C. arctogena and C. canescens due to the detected genetic differences between Hemispheres. It could have arrived to South America and differentiated genetically with subsequent northward or southward colonization along the Andes. In the case of mountain-hopping migration, it might have occurred since the early Pleistocene, with a subsequent extinction of most of the northern South American intermediate populations. In conclusion, our results seem to suggest that C. arctogena and, maybe, C. canescens could have achieved its current bipolar distribution through direct long-distance dispersal. For the particular case of C. maritima, we conclude that the bipolar disjunction could have been originated either by mountain-hopping along the American cordillera or through direct long-distance dispersal. North to South long-distance dispersal The patterns of genetic diversity found in the three bipolar Carex species studied points to North-to-South as the prevalent direction in bipolar long-distance dispersals between 297 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Hemispheres. The most widely distributed haplotypes were always found throughout the Northern Hemisphere and comprised the highest number of haplotype connections, which implies under the coalescent theory that they amount to the ancestral haplotypes (Posada & Crandall, 2001; Figure 4). Moreover, the sections to which these bipolar species are ascribed (sect. Capituligereae, C. arctogena; sect. Glareosae, C. canescens; sect. Foetidae, C. maritima) have the majority of their species distributed in the Northern Hemisphere, a fact that supports a northern origin and subsequent North-to-South long-distance dispersal. 298 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions ◄ Figure 4. Combined TCS haplotype networks of concatenated cpDNA sequences of the studied bipolar Carex species and their sister species: (a) C. arctogena. Shaded and dashed squares represent the geographical distributions of lineages; (b) C. maritima; and (c) C. canescens; (see Chapters 3, 4 and 5 for details). Circles represent haplotypes, lines represent single mutational steps and small black circles are missing haplotypes. Circle shades indicate species, and numbers in parentheses indicate the number of samples per haplotype. Accordingly to our results, Northern to Southern Hemisphere long-distance dispersal is a very frequent pattern of dispersal in plant species (e.g. Vargas et al., 1998; Vijverberg et al., 1999; Yokoyama et al., 2000; Clayton et al., 2009; Escudero et al., 2009; Schaefer et al., 2009; Wen & Ickert-Bond, 2009; Emadzade et al., 2011; Popp et al., 2011; Banasiak et al., 2013; Lewis et al., 2014) and even in other bipolar species such as the lichen Cetraria aculeata (Fernández-Mendoza & Printzen, 2013). However, other plant genera present the opposite direction of dispersal. For example, the centre of origin of genus Larrea (Zygophyllaceae) is located in South America and this genus was inferred to have migrated to North America during the late Neogene by long-distance dispersal, using way stations in Peru and Bolivia and probably mediated by birds (Lia et al., 2001). Likewise, the Rubiaceae family was inferred to have migrated from South to North America during the late Palaeocene–early Eocene using land bridges (Antonelli et al., 2009), as Hoffmannseggia glauca (Fabaceae) via birds during the late Miocene or later (Simpson et al., 2005). 299 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Means of dispersal Wind and water dispersal The utricle surrounding Carex fruit can show some features dispersal, as seen in the inflated utricles of C. physodes for wind-dispersal (Egorova, 1999); in C. baccans, whose red utricles are attractive to birds; or in C. paniculata, whose corky pericarp allows water dispersal (reviewed in Allessio Leck & Schütz, 2005). One of the Carex bipolar species, C. microglochin, has spikes with finely acute perigynia that reflex at maturity and are easily detached, a characteristic that is suggested to facilitate animal dispersal (Savile, 1972). A similar device has evolved independently in another bipolar species, Triglochin palustris (Juncaginaceae; Savile, 1972). However, with the exception of the above mentioned characteristics of the bladder-like small utricles, Carex generally lack any obvious morphological features for dispersal by abiotic or biotic forces. With the exception of C. microglochin, none of the bipolar Carex species displays standard morphological syndromes for long-distance dispersal (as described by Higgins et al., 2003). In fact, long-distance dispersal of seeds (> 100 km) might not be necessarily driven by those vectors inferred from plant morphology; they are usually associated with stochastic events (unusual behaviour of regular events or a combination of vectors; Nathan et al., 2008). Some dispersal agents are typically involved in long-distance dispersal, such as birds, ocean or wind currents (Nathan et al., 2008; Gillespie et al., 2012). Considering the extreme dispersal distance together with the shape and structure of the bipolar Carex propagules, we consider that its dispersal was more likely to have been mediated by migratory animals than 300 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions by wind or ocean currents, which seem insufficient for such enormous task. Besides, there are no wind or oceans currents connecting Northern a Southern Hemispheres. Both wind and ocean currents have opposite directions when approaching the Equator (Hyeong et al., 2005); thus, if propagules have been transported by wind or ocean currents, they would have to make a stop at low latitudes and then have been transported again into the other hemisphere. Besides, successful oceanic dispersal is influenced by a complex interaction between ocean dynamics and geomorphology at past and present times, together with the ability of plants for survival during transportation (Gillespie et al., 2012). Although it cannot be discarded, it seems an extremely unlikely event for bipolar plant dispersals. Nonetheless, wind and ocean currents have been suggested to be responsible for plant migration within hemispheres (e.g. Brooker et al., 2001; Brochmann et al., 2003; Renner, 2004; Alsos et al., 2009; Gillespie et al., 2012). Bird dispersal Some birds which migrate from North America to temperate zones of South America have already been pointed out as the most likely dispersal agents of the several disjunct plant groups (Cruden, 1966; and references therein; Popp et al., 2011; Lewis et al., 2014). Carex seeds have been reported to be intact after transport by birds (Mueller & van der Valk, 2002), and arrivals of Carex species to newly formed islands have predominantly been reported to happen when seeds were embedded in mud attached to birds’ feet or else when eaten and carried inside by birds (Carlquist, 1967). Therefore, birds seem to be playing an important role in Carex dispersal. 301 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Bird-mediated direct long-distance dispersal from North America to South America has already been used to explain a bipolar disjunction in crowberries (Empetrum; Popp et al., 2011). Most migratory birds that disperse seeds live in temperate and boreal regions (Wheelwright, 1988). For birds to act as vectors for seed dispersal by endo- or ectozoochory, the seeds must have morphological features for association with these animals, and must be able to maintain their viability after intestinal transit to allow for establishment in new environments (Gillespie et al., 2012). However, it has been proven that Carex species are transported even in the lack of obvious morphological features for zoochorous dispersal (Carlquist, 1967), as it happens to the three bipolar species studied here. Other structures or features that are not directly related with dispersal syndromes may be involved, including anatomical features such as deposits of silica in the pericarp that harden seeds (Graven et al., 1996; Prychid et al., 2004). These silica deposits could protect seeds when passing through birds’ alimentary tracts (Graven et al., 1996) but could also make the seeds as hard as pebbles and useful for grinding other organic material in bird gizzards. Carex fruits could therefore be doubly preferred by birds – both as nourishment and as gastroliths (Alexander et al., 1996). Some birds from North America, such as the pectoral sandpiper, Calidris melanotos (Holmes & Pitelka, 1998), and the lesser yellowlegs, Tringa flavipes (Tibbitts & Moskoff, 1999), are known to feed in sedge meadows before migrating southwards to their wintering grounds in South America. Their breeding ranges closely match the current distribution of Carex bipolar species in North and South America. Although current bird migratory patterns do not necessarily coincide with past migrations, these observations suggest that the bipolar disjunction in Carex species may have 302 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions originated via bird-mediated long-distance dispersal. Additionally, dispersal may occur through accidental displacement – vagrant birds or migrants, such as those flying to Australia or New Zealand, deviating widely from their normal route (Battley et al., 2012). With satellite telemetry, Gill et al. (2009) recorded transoceanic flights of bar-tailed godwits (Limosa lapponica baueri) from Alaska to New Zealand and showed that they can fly 10,153 km (± 1043 SD) non-stop in 7.8 days (± 1.3 SD). This extraordinary flight, combined with species that can be preferentially chosen for fuel, could help species to achieve a bipolar distribution by means of direct long-distance dispersal. Therefore, we consider it plausible that bipolar Carex species could have acquired its bipolar distribution by means of bird-mediated dispersal. Human introductions Six out of the 30 bipolar species are confirmed introductions or suspicious of being introduced in the Southern Hemisphere (Table 1). Carex maritima is the only species studied here that molecular data have been enough to prove a non-anthropochorus origin, since Southern Hemisphere populations diverged during the early-middle Pleistocene. For C. canescens, the weakly supported clade of two Argentinian samples, do not allow us to reject that hypothesis; neither for C. arctogena, whose Southern Hemisphere populations are genetically identical to the Northern Hemisphere ones. In these cases, species’ adaptation to local environmental conditions, biotic interactions and demographic processes of these species would all have been established relatively quickly (Theoharides & Dukes, 2007). Populations of C. arctogena and C. canescens in Patagonia occur in well-conserved 303 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions habitats and most are only accessible on foot. Specimens of C. arctogena from Patagonia are few in the South American herbaria BA, BAA, BAB, BCRU, HIP and SI, with some dating to the late 1880s, when the human influence in the southernmost parts of South America was very limited. Although we cannot strongly rule out an anthropogenic introduction of neither of these two species to South America, it seems very unlikely. Unusual behaviour of vectors A typical seed morphology has traditionally been associated to a particular dispersal vector, (haplochory; i.e. dispersal mediated by a single standard dispersal vector; Nathan et al., 2008); however, there is now more evidence of dispersal mediated by more than one vector (i.e. polychory; reviewed in Nathan et al., 2008). One example of this shift is the dispersal of Taraxacum officinale, a typical wind-dispersed species whose hairy seeds have a halftime buoyancy of 2.57 days in water (Boedeltje et al., 2003) and potential for ectozoochory (Tackenberg et al., 2006). When dandelion seeds are wind dispersed, they go away from the mother plant around 2.15 meters (Soons & Ozinga, 2005) whereas when they are waterdispersed or animal-dispersed, they can fairly increase that distance and hence, the potential for long-distance dispersal by other vectors. In fact, species with small seeds such as those of the dandelion and/or from water-influenced habitats are often highly dispersible taxa (Mcglone et al., 2001). Therefore, species can be dispersed longer distances with unpredicted or non-associated vectors than with vectors directly associated to its dispersal syndromes. This could also be the case in arctic plant species, that have been demonstrated to migrate enormous distances despite of the lack of specific syndromes (Abbott et al., 2003). Thus, we suggest that relatively unspecialized structures for dispersal might play a role in the distribution of these bipolar Carex species and we regard the hypothesis of non- 304 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions standard vector-mediated dispersal, either by abiotic or biotic forces, as a possible explanation of their bipolar disjunction. Nonetheless, rare processes or unusual behaviour of vectors have been inferred to have dispersed seeds over long distances (Higgins & Richardson, 1999; Nathan et al., 2002, 2008; Higgins et al., 2003). In fact, long-distance dispersal is claimed as a widespread phenomenon in many plant species without standard morphological syndromes for longdistance dispersal (Carlquist, 1967; Cain et al., 2000; Higgins et al., 2003; Alsos et al., 2007; Dixon et al., 2009). Successful establishment after dispersal in Carex bipolar species To produce a disjunct distribution, long-distance dispersal has to be followed by the establishment of a permanent population in a new area. In many cases, establishment in a new environment - which is determined by the environment and biotic conditions of the host community (Mitchell et al., 2006) - may be more difficult to achieve that long-distance dispersal per se. Therefore, it is not the chance of dispersal alone but the entire colonization process, this is, dispersal followed by establishment, which is critical for a species to expand its geographical range. Our results show that in the Southern Hemisphere the three Carex bipolar species studied occupy a more restricted climatic niche than in the Northern Hemisphere. It is more differentiated in C. maritima and C. arctogena than in C. canescens, whose Southern Hemisphere populations fall within the general ecological conditions tolerated by the species, which seem to be very wide. This ecological plasticity of C. arctogena and C. 305 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions maritima or the tolerance of harsher conditions in the Northern Hemisphere than in the Southern Hemisphere could have been a key element in their establishment after dispersal. If these species have been successful colonizing the Southern Hemisphere, why are not they in the same ecological niche in the Northern Hemisphere? Are there any of the Southern Hemisphere niches available in the Northern Hemisphere? If yes, why are not they found there? One possible reason could be found in community assemblies or competitive interaction of those areas (Waters, 2011), which could be easier to penetrate in the Southern Hemisphere than in potential areas in the Northern Hemisphere. Such biotic differences could have allowed them to shift into new habitats and climate zones (Broennimann et al., 2007) in the Southern Hemisphere. Alternatively, establishment could have taken place at a time when both areas had similar climatic conditions. More robust conclusions could be obtained with principal component analysis methods by measuring climatic niche shifts using Bayesian generalized linear models (e.g. González-Moreno et al., 2014). Intrinsic conditions for long-distance dispersal and establishment Self-fertilization is a reproductive characteristic displayed by many species with disjunct populations in the temperate zones (Carlquist, 1983). This attribute could play in favour of local survival and establishment after long-distance dispersal events, given that a single propagule of self-compatible individuals could in principle be sufficient to start a sexuallyreproducing colony (Baker, 1955). In congruence, Carex species are predominantly monoecious and in general highly self-pollinated (Friedman & Barrett, 2009), which has been inferred from studies based on hand pollinations, isozyme work (e.g. Ohkawa et al., 306 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions 2000; Friedman & Barrett, 2009) and microsatellite data (e.g. Escudero et al., 2010b, 2013). This characteristic could explain, at least in part, the often successful colonization of Carex species after a long-distance dispersal event (Moore et al., 1971; Ball, 1990; Escudero et al., 2009). In addition, chromosome rearrangements have been shown to be correlated with phenotypic differences, as well as being thought to enhance fitness in different habitats (Coghlan et al., 2005). Specifically, high chromosome number evolution is a result of: (i) selection by climatic regime and ecological strategies; and (ii) neutral processes such as phylogenetic inertia or migration processes (Escudero et al., 2012, 2013). The high chromosome number variation in some bipolar Carex species [C. canescens, 2n = 52-54, 56-58, 60, 62; C. macloviana, 2n= 82, 82-86, 86; C. magellanica, 2n= 58, ca. 60; reviewed in Roalson et al., 2008) might also be a result of the influence of the climatic environments at different latitudes and distant regions. Carex arctogena (2n=50) and C. maritima (2n=60) have not been reported to display chromosome number variation (Roalson, 2008). 307 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Conclusions 1. Carex capitata and C. arctogena are two different species; populations from South America correspond to C. arctogena, and thus, Carex antarctogena is a synonym of C. arctogena. 2. The morphological variation found in populations from Western North America leads to the description of one new species C. cayouetteana, and two new subspecies C. cayouetteana subsp. altasierra and C. cayouetteana subsp. bajasierra. 3. The genus Carex is the genus with the largest number of bipolar species (six). 4. Two hypotheses can be rejected for all bipolar Carex species: vicariance and convergent evolution. They only hypothesis that cannot be rejected is long-distance dispersal. 5. The bipolar species studied have probably migrated from the Northern Hemisphere to the Southern Hemisphere. 6. All bipolar Carex species studied originated from the late Miocene: C. arctogena diverged in the late Miocene to early Pleistocene (5 Ma; 95% HPD: 2.01 – 8.03 Ma); C. maritima during middle–late Pliocene to early–middle Pleistocene (0.23 Ma; 95% HPD: 0.03– 0.51 Ma); and C. canescens during the Pleistocene (1.17 Ma; 95% HPD: 0.34– 2.17 Ma). 7. There are no genetic differences between Northern and Southern Hemispheres populations of C. arctogena and C. canescens, which suggest a recent, direct longdistance dispersal, probably mediated by birds. 308 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions 8. Carex maritima populations from the Southern Hemisphere were genetically and ecologically differentiated from their northern counterparts. 9. Carex canescens have dispersed at least twice to the Southern Hemisphere, once to Australia and once to South America. 309 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions REFERENCES Abbott R.J.J., Brochmann C., & Review I. (2003) History and evolution of the arctic flora: in the footsteps of Eric Hultén. Molecular Ecology, 12, 299–313. Alexander S.A., Hobson K.A., Gratto-Trevor C.L., & Diamond A.W. (1996) Conventional and isotopic determination of shorebird diets at an inlad stopover: the importance of invertebrates and Potamogeton pectinatus tubers. Canadian Journal of Zoology, 74, 1057–1068. Allessio Leck M. & Schütz W. (2005) Regeneration of Cyperaceae, with particular reference to seed ecology and seed banks. Perspectives in Plant Ecology, Evolution and Systematics, 7, 95–133. Alsos I.G., Alm T., Normand S., & Brochmann C. (2009) Past and future range shifts and loss of diversity in dwarf willow (Salix herbacea L.) inferred from genetics, fossils and modelling. Global Ecology and Biogeography, 18, 223–239. Alsos I.G., Eidesen P.B., Ehrich D., Skrede I., Westergaard K., Jacobsen G.H., Landvik J.Y., Taberlet P., & Brochmann C. (2007) Frequent long-distance plant colonization in the changing Arctic. Science, 316, 1606–1609. Antonelli A., Nylander J.A.A., Persson C., Sanmartin I., Sanmartín I., & Sanmartin I. (2009) Tracing the impact of the Andean uplift on Neotropical plant evolution. Proceedings of the National Academy of Sciences of the United States of America, 106, 9749–9754. Antonelli A. & Sanmartín I. (2011) Mass Extinction, gradual cooling, or rapid radiation? reconstructing the spatiotemporal evolution of the ancient angiosperm genus hedyosmum (Chloranthaceae) using empirical and simulated approaches. Systematic Biology, 60, 596–615. Audley-Charles M. (1991) Tectonics Of The New Guinea Area. Annual Review of Earth and Planetary Sciences, 19, 17–41. Baker H.G. (1955) Self-compatibility and establishment after’long-distance'dispersal. Evolution, 9, 347–349. Ball P.W. (1990) Some aspects of the phytogeography of Carex. Canadian Journal of Botany, 68, 1462–1472. Banasiak Ł., Piwczyński M., Uliński T., Downie S.R., Watson M.F., Shakya B., & Spalik K. (2013) Dispersal patterns in space and time: a case study of Apiaceae subfamily Apioideae. Journal of Biogeography, 40, 1324–1335. 310 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Battley P.F., Warnock N., Tibbitts T.L., Gill R.E., Piersma T., Hassell C.J., Douglas D.C., Mulcahy D.M., Gartrell B.D., Schuckard R., Melville D.S., & Riegen A.C. (2012) Contrasting extreme long-distance migration patterns in bar-tailed godwits Limosa lapponica. Journal of Avian Biology, 43, 21–32. Boedeltje G., Bakker J.P., Bekker R.M., Van Groenendael J.M., & Soesbergen M. (2003) Plant dispersal in a lowland stream in relation to occurrence and three specific lifehistory traits of the species in the species pool. Journal of Ecology, 91, 855–866. Brochmann C., Gabrielsen T.M., Nordal I., Landvik J.Y., & Elven R. (2003) Glacial survival or tabula rasa? The history of North Atlantic biota revisited. Taxon, 52, 417– 450. Broennimann O., Treier U.A., Müller-Schärer H., Thuiller W., Peterson A.T., & Guisan A. (2007) Evidence of climatic niche shift during biological invasion. Ecology Letters, 10, 701–709. Brooker R.W., Carlsson B.Å., & Callaghan T. V. (2001) Carex bigelowii torrey ex schweinitz (C. rigida Good., non Schrank; C. hyperborea Drejer). Journal of Ecology, 89, 1072–1095. Cain M.L., Milligan B.G., & Strand A.E. (2000) Long-distance seed dispersal in plant populations. American Journal of Botany, 87, 1217–1227. Carlquist S. (1967) The biota of long-distance dispersal. V. Plant dispersal to Pacific Islands. Bulletin of the Torrey Botanical Club, 94, 129–162. Carlquist S. (1983) Intercontinental dispersal. Dispersal and Distribution, 37–47. Clayton J.W., Soltis P.S., & Soltis D.E. (2009) Recent long-distance dispersal overshadows ancient biogeographical patterns in a pantropical angiosperm family (Simaroubaceae, Sapindales). Systematic Biology, 58, 395–410. Coghlan A., Eichler E.E., Oliver S.G., Paterson A.H., & Stein L. (2005) Chromosome evolution in eukaryotes: A multi-kingdom perspective. Trends in Genetics, 21, 673– 682. Cook L.G. & Crisp M.D. (2005) Not so ancient: the extant crown group of Nothofagus represents a post-Gondwanan radiation. Proceedings. Biological sciences / The Royal Society, 272, 2535–2544. Cruden R.W. (1966) Birds as agents of long-distance dispersal for disjunct plant groups of the temperate western hemisphere. Evolution, 20, 517–532. Dixon C.J., Schönswetter P., Vargas P., Ertl S., & Schneeweiss G.M. (2009) Bayesian hypothesis testing supports long-distance Pleistocene migrations in a European high 311 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions mountain plant (Androsace vitaliana, Primulaceae). Molecular Phylogenetics and Evolution, 53, 580–591. Egorova T.V. (1999) The sedges (Carex L.) of Russia and adjacent states (within the limits of the former USSR). St. Petersburg State Chemical-Pharmaceutical Academy, Missouri Botanical Garden Press, St. Petersburg; St. Louis Mo. Emadzade K., Gehrke B., Peter Linder H., & Hörandl E. (2011) The biogeographical history of the cosmopolitan genus Ranunculus L. (Ranunculaceae) in the temperate to meridional zones. Molecular Phylogenetics and Evolution, 58, 4–21. Escudero M. & Hipp A. (2013) Shifts in diversification rates and clade ages explain species richness in higher-level sedge taxa (Cyperaceae). American Journal of Botany, 100, 1– 9. Escudero M., Hipp A.L., Hansen T.F., Voje K.L., & Luceño M. (2012) Selection and inertia in the evolution of holocentric chromosomes in sedges (Carex, Cyperaceae). The New phytologist, 195, 237–247. Escudero M., Maguilla E., & Luceño M. (2013) Selection by climatic regime and neutral evolutionary processes in holocentric chromosomes (Carex gr. laevigata: Cyperaceae): A microevolutionary approach. Perspectives in Plant Ecology, Evolution and Systematics, 15, 118–129. Escudero M., Valcárcel V., Vargas P., & Luceño M. (2009) Significance of ecological vicariance and long-distance dispersal in the diversification of Carex sect. Spirostachyae (Cyperaceae). American Journal of Botany, 96, 2100–2114. Escudero M., Valcárcel V., Vargas P., & Luceño M. (2010a) Bipolar disjunctions in Carex: Long-distance dispersal, vicariance, or parallel evolution? Flora, 205, 118–127. Escudero M., Vargas P., Arens P., Ouborg N.J., & Luceño M. (2010b) The east-west-north colonization history of the Mediterranean and Europe by the coastal plant Carex extensa (Cyperaceae). Molecular Ecology, 19, 352–370. Fernández-Mendoza F. & Printzen C. (2013) Pleistocene expansion of the bipolar lichen Cetraria aculeata into the Southern hemisphere. Molecular Ecology, 22, 1961–1983. Friedman J. & Barrett S.C.H. (2009) The consequences of monoecy and protogyny for mating in wind-pollinated Carex. New Phytologist, 489–497. Galley C. & Linder H.P. (2006) Geographical affinities of the Cape flora, South Africa. Journal of Biogeography, 33, 236–250. Garzione C.N., Hoke G.D., Libarkin J.C., Withers S., MacFadden B., Eiler J., Ghosh P., & Mulch A. (2008) Rise of the Andes. Science, 320, 1304–1307. 312 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Gill R.E., Tibbitts T.L., Douglas D.C., Handel C.M., Mulcahy D.M., Gottschalck J.C., Warnock N., McCaffery B.J., Battley P.F., & Piersma T. (2009) Extreme endurance flights by landbirds crossing the Pacific Ocean: ecological corridor rather than barrier? Proceedings of the Royal Society of London, Series B, Biological Sciences, 276, 447– 457. Gillespie R.G., Baldwin B.G., Waters J.M., Fraser C.I., Nikula R., & Roderick G.K. (2012) Long-distance dispersal: a framework for hypothesis testing. Trends in Ecology and Evolution, 27, 47–56. González-Moreno, P., Diez, J.M., Richardson, D.M. & Montserrat V. (2014) Beyond climate: disturbance niche shifts in invasive species. Global Ecology and Biogeography, 24, 360–370. Graven P., de Kroster C.G., Boon J.J., & Bouman F. (1996) Structure and macromolecular composition of the seed coat of the Musaceae. Annals of Botany, 77, 105–122. Van der Hammen T. (1974) The Pleistocene Changes of vegetation and climate in tropical South America. Journal of Biogeography, 1, 3–26. Heide O.M. (2002) Climatic flowering requirements of bipolar sedges Carex spp. and the feasibility of their trans-equatorial migration by mountain-hopping. Oikos, 99, 352– 362. Hennequin S., Schuettpelz E., Pryer K.M., Ebihara A., & Dubuisson J. (2008) Divergence Times and the Evolution of Epiphytism in Filmy Ferns (Hymenophyllaceae) Revisited. International Journal of Plant Sciences, 169, 1278–1287. Higgins S.I., Nathan R., & Cain M.L. (2003) Are long-distance dispersal events in plants usually caused by nonstandard means of dispersal? Ecology, 84, 1945–1956. Higgins S.I. & Richardson D.M. (1999) Predicting Plant Migration Rates in a Changing World: The Role of Long-Distance Dispersal. The American Naturalist, 153, 464–475. Holmes R.T. & Pitelka F.A. (1998) Pectoral Sandpiper (Calidris melanotos). The Birds of North America No. 348 (ed. by A. Poole and F. Gill), The Academy of Natural Sciences, Philadelphia, and the AOU, Washington, DC. Hoorn, C., Wesselingh, F.P., Ter Steege, H., Bermudez, M.A., Mora, A., Sevink, J., Sanmartín, I., Anderson, C.L., Figueiredo, J.P., Jaramillo, C., Riff, D. & Antonelli, A. (2010). Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity. Science, 330, 927-931. Hyeong K., Park S.H., Yoo C.M., & Kim K.H. (2005) Mineralogical and geochemical compositions of the eolian dust from the northeast equatorial Pacific and their 313 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions implications on paleolocation of the Intertropical Convergence Zone. Paleoceanography, 20, 1–11. Janssen T. & Bremer K. (2004) The age of major monocot groups inferred from 800+ rbcL sequences. Botanical Journal of the Linnean Society, 146, 385–398. Lenters J.D., Cook K.H., & Ringler T.D. (1995) Comments on “On the influence of the Andes on the General Circulation of the Southern Hemisphere.” American Meteorological Society, 8, 2113–2115. Lewis L.R., Rozzi R., & Goffinet B. (2014) Direct long-distance dispersal shapes a New World amphitropical disjunction in the dispersal-limited dung moss Tetraplodon (Bryopsida: Splachnaceae). Journal of Biogeography, 41, n/a–n/a. Li G.D., Kim C., Zha H.G., Zhou Z., Nie Z.L., & Sun H. (2014) Molecular phylogeny and biogeography of the arctic-alpine genus Lagotis (Plantaginaceae). Taxon, 63, 103–115. Lia V.V., Confalonieri V.A., Comas C.I., & Hunziker J.H. (2001) Molecular phylogeny of Larrea and its allies (Zygophyllaceae): reticulate evolution and the probable time of creosote bush arrival to North America. Molecular Phylogenetics and Evolution, 21, 309–320. Lledó M.D., Crespo M.B., Fay M.F., & Chase M.W. (2005) Molecular phylogenetics of Limonium and related Genera (Plumbaginaceae): Biogeographical and Systematic Implications. American Journal of Botany, 92, 1189–1198. Mcglone M.S., Duncan R.P., & Box P.O. (2001) Endemism , species selection and the origin and distribution of the vascular plant flora of New Zealand. Journal of Biogeography, 28, 199–216. McQuarrie N., Horton B.K., Zandt G., Beck S., & DeCelles P.G. (2005) Lithospheric evolution of the Andean fold-thrust belt, Bolivia, and the origin of the central Andean plateau. Tectonophysics, 399, 15–37. Von Mering S. (2013) Systematics, phylogeny and biogeography of Juncaginaceae. Johannes Gutenberg-Universität Mainz, Michalak I., Zhang L.B., & Renner S.S. (2010) Trans-Atlantic, trans-Pacific and transIndian Ocean dispersal in the small Gondwanan Laurales family Hernandiaceae. Journal of Biogeography, 37, 1214–1226. Mitchell C.E., Agrawal A.A., Bever J.D., Gilbert G.S., Hufbauer R.A., Klironomos J.N., Maron J.L., Morris W.F., Parker I.M., Power A.G., Seabloom E.W., Torchin M.E., & Vázquez D.P. (2006) Biotic interactions and plant invasions. Ecology letters, 9, 726– 40. 314 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Moore D.M., & Chater A.O. (1971) Studies on bipolar species. Botanical Notiser, 124, 317–334. Moreno P.I., Villagran C., Marquet P. a, & Marshall L.G. (1994) Quaternary paleobiogeography of northern and central Chile. Revista Chilena de Historia Natural, 67, 487–502. Mueller M.H. & van der Valk A.G. (2002) The potential role of ducks in wetland seed dispersal. Wetlands, 22, 170–178. Nathan R., Leng Q., Katul G.G., Horn H.S., Thomas S.M., Oren R., Avissar R., Pacala S.W., & Levin S.A. (2002) Mechanisms of long-distance dispersal of seeds by wind. Nature, 418, 409–414. Nathan R., Schurr F.F.M.F., Spiegel O., Steinitz O., Trakhtenbrot A., Tsoar A., A, Trakhtenbrot A., Tsoar A., & A (2008) Mechanisms of long-distance seed dispersal. Trends in Ecology & Evolution, 23, 638–647. Ohkawa T., Yokota M., & Hoshino T. (2000) Aneuploidal population differentiation in Carex sociata Boott (Cyperaceae) of the Ryukyu Islands, Japan. Botanical Journal of the LInnean Society, 337–358. Popp M., Mirré V., & Brochmann C. (2011) A single Mid-Pleistocene long-distance dispersal by a bird can explain the extreme bipolar disjunction in crowberries (Empetrum). Proceedings of the National Academy of Sciences of the United States of America, 108, 6520–5. Posada D. & Crandall K.A. (2001) Intraspecific gene genealogies: trees grafting into networks. Trends in Ecology & Evolution, 16, 37–45. Prychid C.J., Rudall P.J., & Gregory M. (2004) Systematics and biology of silica bodies in Monocotyledons. The Botanical Review, 69, 377–440. Quade J., Garzione C., & Eiler J. (2007) Paleoelevation Reconstruction using Pedogenic Carbonates. Reviews in Mineralogy and Geochemistry, 66, 53–87. De Queiroz A. (2005) The resurrection of oceanic dispersal in historical biogeography. Trends in Ecology and Evolution, 20, 68–73. Rabassa J. & Coronato A. (2009) Glaciations in Patagonia and Tierra del Fuego during the Ensenadan Stage/Age (Early Pleistocene–earliest Middle Pleistocene). Quaternary International, 210, 18–36. Rabassa J., Coronato A.M., & Salemme M. (2005) Chronology of the Late Cenozoic Patagonian glaciations and their correlation with biostratigraphic units of the Pampean region (Argentina). Journal of South American Earth Sciences, 20, 81–103. 315 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Raven P.H. (1963) Amphitropical Relationships in the Floras of North and South America. The Quarterly Review of Biology, 38, 151–177. Renner S. (2004) Plant Dispersal across the Tropical Atlantic by Wind and Sea Currents. International Journal of Plant Sciences, 165, S23–S33. Renner S.S., Strijk J.S., Strasberg D., & Thébaud C. (2010) Biogeography of the Monimiaceae (Laurales): A role for East Gondwana and long-distance dispersal, but not West Gondwana. Journal of Biogeography, 37, 1227–1238. Roalson E.H. (2008) A synopsis of chromosome number variation in the Cyperaceae. Botanical Review, 74, 209–393. Sanmartín I. & Ronquist F. (2004) Southern hemisphere biogeography inferred by eventbased models: plant versus animal patterns. Systematic biology, 53, 216–43. Savile D.B.O. (1972) Arctic adaptations in plants. Monograph No. 6. Canada Department of Agriculture Research Branch, Ottawa. Schaefer H., Heibl C., & Renner S.S. (2009) Gourds afloat: a dated phylogeny reveals an Asian origin of the gourd family (Cucurbitaceae) and numerous oversea dispersal events. Proceedings of the Royal Society of London, Series B, Biological Sciences, 276, 843–851. Schuster T.M., Setaro S.D., & Kron K. a. (2013) Age Estimates for the Buckwheat Family Polygonaceae Based on Sequence Data Calibrated by Fossils and with a Focus on the Amphi-Pacific Muehlenbeckia. PLoS ONE, 8, . Scotese C., Gahagan L., & Larson R. (1988) Plate tectonic reconstructions of the Cretaceous and Cenozoic ocean basins. Tectonophysics, 155, 27–48. Scotese C.R. (2004) Cenozoic and Mesozoic Paleogeography. Frontiers in Biogeography: new directions in the Geography of Nature (ed. by M. V Lomolino and L.R. Heaney), pp. 1–25. Sinauer Associates, Scotland R.W. (2011) What is parallelism? Evolution & Development, 13, 214–427. Simpson B.B., Tate J.A., & Weeks A. (2005) The biogeography of Hoffmannseggia (Leguminosae, Caesalpinioideae, Caesalpinieae): A tale of many travels. Journal of Biogeography, 32, 15–27. Smith J.M.B. (1986) Origins of Australasian tropicalpine and alpine floras. Flora and fauna of alpine Australasia: ages and origins. Flora and fauna of alpine Australasia: ages and origins, 109, 128. 316 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Soons M.B. & Ozinga W. a. (2005) How important is long-distance seed dispersal for the regional survival of plant species? Diversity and Distributions, 11, 165–172. Starr J.R., Harris S.A., & Simpson D.A. (2008) Phylogeny of the Unispicate Taxa in Cyperaceae Tribe Cariceae II: The Limits of Uncinia. Monographs in Systematic Botany from the Missouri Botanical Garden, 108, 243–267. Swenson U., Backlund A., McLoughlin S., & Hill R.S. (2001) Nothofagus biogeography revisited with special emphasis on the enigmatic distribution of subgenus Brassospora in New Caledonia. Cladistics, 17, 28–47. Tackenberg O., Römermann C., Thompson K., & Poschlod P. (2006) What does diaspore morphology tell us about external animal dispersal? Evidence from standardized experiments measuring seed retention on animal-coats. Basic and Applied Ecology, 7, 45–58. Theoharides K.A. & Dukes J.S. (2007) Plant invasion across space and time: factors affecting nonindigenous species success during four stages of invasion. The New Phytologist, 176, 256–273. Tibbitts T.L. & Moskoff W. (1999) Lesser Yellowlegs (Tringa flavipes). The Birds of North America No. 427 (ed. by A. Poole and F. Gill), The Birds of North America, Inc., Philadelphia, PA. Vargas P., Baldwin B.G., & Constance L. (1998) Nuclear ribosomal DNA evidence for a western North American origin of Hawaiian and South American species of Sanicula (Apiaceae). Proceedings of the National Academy of Sciences of the United States of America, 95, 235–240. Verboom G.A., Archibald J.K., Bakker F.T., Bellstedt D.U., Conrad F., Dreyer L.L., Forest F., Galley C., Goldblatt P., Henning J.F., Mummenhoff K., Linder H.P., Muasya a. M., Oberlander K.C., Savolainen V., Snijman D. a., Niet T. Van Der, & Nowell T.L. (2009) Origin and diversification of the Greater Cape flora: Ancient species repository, hot-bed of recent radiation, or both? Molecular Phylogenetics and Evolution, 51, 44–53. Vijverberg K., Mes T.H.M., & Bachmann K. (1999) Chloroplast DNA evidence for the evolution of Microseris (Asteraceae) in Australia and New Zealand after long-distance dispersal from western North America. American Journal of Botany, 86, 1448–1463. Viljoen J.-A., Muasya A.M., Barrett R.L., Bruhl J.J., Gibbs A.K., Slingsby J.A., Wilson K.L., & Verboom G.A. (2013) Radiation and repeated transoceanic dispersal of Schoeneae (Cyperaceae) through the southern hemisphere. American Journal of Botany, 100, 2494–2508. 317 ________________________________________________________________ ________________________________________________________________ Chapter 6. General discussion and conclusions Waters J.M. (2011) Competitive exclusion: phylogeography’s “elephant in the room”? Molecular Ecology, 20, 4388–4394. Waters J.M. & Craw D. (2006) Goodbye Gondwana? New Zealand biogeography, geology, and the problem of circularity. Systematic biology, 55, 351–356. Wen J. & Ickert-Bond S.M. (2009) Evolution of the Madrean-Tethyan disjunctions and the North and South American amphitropical disjunctions in plants. Journal of Systematics and Evolution, 47, 331–348. Wheeler G.A. & Guaglianone E.R. (2003) Notes on South American Carex (Cyperaceae): C. camptoglochin and C. microglochin. Darwiniana, 41, 193–206. Wheelwright N.T. (1988) Fruit-eating birds and bird-dispersed plants in the tropics and temperate zone. Trends in Ecology & Evolution, 3, 270–274. Wikström N. & Kenrick P. (2001) Evolution of Lycopodiaceae (Lycopsida): estimating divergence times from rbcL gene sequences by use of nonparametric rate smoothing. Molecular phylogenetics and evolution, 19, 177–186. Wikström N., Savolainen V., & Chase M.W. (2001) Evolution of the angiosperms: calibrating the family tree. Proceedings. Biological sciences / The Royal Society, 268, 2211–2220. Winkworth R.C., Wagstaff S.J., Glenny D., & Lockhart P.J. (2005) Evolution of the New Zealand mountain flora: Origins, diversification and dispersal. Organisms Diversity and Evolution, 5, 237–247. Yokoyama J., Suzuki M., Iwatsuki K., & Hasebe M. (2000) Molecular phylogeny of Coriaria, with special emphasis on the disjunct distribution. Molecular Phylogenetics and Evolution, 14, 11–19. Zeng L., Zhang Q., Sun R., Kong H., Zhang N., & Ma H. (2014) Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times. Nature Communications, 5, 4956. 318