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BIOCHEMISTRY FOR THE HEALTH SCIENCES BISC 2070 – Spring 2015 Course Director: Office: Lab: Telephone: E-mail: Web Site: Office Hours: Kevin R. Siebenlist, Ph.D. Walter Schroeder Complex, Room 320B Walter Schroeder Complex, Room 308 86555 (288-6555) kevin.siebenlist@marquette.edu http://academic.mu.edu/bisc/siebenlistk Mon, Wed, and Fri 11:00 pm - 1:50 pm; by appointment; and by chance Course Description: This is a one-semester biochemistry course designed for the health professional. All cells and organisms require three things to survive and propagate; precursors, energy, and information. The first part of the course examines the structure and chemistry of the precursors; the carbohydrates, lipids, and amino acids. Using these precursors as a starting point; proteins, enzymes, and membrane structure and function are discussed. In addition, the structure and function of vitamins and the role they play as coenzymes or cosubstrates for enzymes is presented. The second segment of the course deals with how the precursor molecules are used to generate or store energy. Their oxidation to CO2 and H2O for energy and their use in the synthesis of complex biomolecules is explored. Emphasis is placed upon the control mechanisms of metabolism and the interrelationships between the metabolism of the variety of precursors. It is important to understand how metabolism functions as a unified whole. Lastly, the information molecules, the molecular biology of the cell is investigated. In this section the structure and function of Deoxyribonucleic Acid (DNA) and Ribonucleic Acid (RNA) is discussed. Information storage in DNA, the flow of information from DNA to RNA, and the utilization of this information to direct the synthesis of proteins are described. Gene cloning and the molecular aspects of health and disease at the level of DNA are discussed in this section. Throughout the course, special emphasis is placed upon how biochemistry relates to normal health and disease. Course Objectives: Students will gain an understanding of: 1. the process of life at the molecular level. 2. how living matter is formed, maintained, and destroyed. 3. the process, control, and regulation of metabolism. 4. how the internal environment, diet, and hormones affect the living organism. 5. the flow of biological information from DNA through RNA to protein. 6. the biochemical basis of health and disease. Course Learning Outcomes: 1. Students will have a working vocabulary (can give a definition, use terms in context, apply the term to a new context) of biochemical terms. 2. Students will distinguish/identify/explain the biochemical structure of proteins, carbohydrates, and lipids. 3. Students will distinguish/explain the various functions of proteins, carbohydrates, and lipids. 4. Students will discriminate between the important metabolic pathways of the cell in health and disease. 5. Students will predict/explain the behavior of biomolecules/biochemical systems by applying chemical principles to these systems. 6. Students will integrate the structures and functions of biomolecules with the metabolism and molecular biology of the cell in health and disease. 1 Resources: Required Texts: GENERAL, ORGANIC, AND BIOCHEMISTRY, 8th Ed., Katherine J. Denniston, Joseph J. Topping, Kim R. Woodrum, & Robert L. Caret, McGraw Hill, 2014. Attendance Policy: Attendance is not required, but very strongly recommended. Although not required, attendance will be taken using sign-in sheets. Data collected from the sign in sheets will be used to identify students whose excessive absences may be affecting their performance. My Web Site: My academic web site is: http://academic.mu.edu/bisc/siebenlistk. I will post on this site copies of the figures used during lecture, lecture notes, study guides, and any other information / data necessary for you to have. Homework: Homework assignments will be posted on the McGraw Hill Connect Web Site. To register on this site go to: https://connect.mheducation.com/class/k-siebenlist-spring-2015 and click the “register now” button. Access to individual homework assignments will be opened while the topic is being discussed or shortly after. Access will be closed at 12:00 noon on the day of the exam covering that topic. A total of 12 homework assignments will be posted. A total of 10 homework assignments must be completed over the course of the semester. Greater than 10 homework assignments may be completed in which case the final homework grade will be computed employing the best 10 homework assignments. Evaluation Criteria/Methods: Final grades are based upon 700 possible points. There will be four in course examinations worth 100 points each (400 possible points total). In course exams will consist of 50+ multiple-choice questions. The homework assignments will be worth a maximum of 100 points toward the final grade. Assigned problems are representative of the types seen on the in course exams. There will be a cumulative final exam worth 200 points. The cutoffs for assigning grades are given below. Letter Grade A AB B BC C CD D F Points (Cumulative) 644 - 700 (92%) 609 - 643 (87%) 560 - 608 (80%) 525 - 559 (75%) 469 - 524 (67%) 434 - 468 (62%) 378 - 433 (54%) 0 - 377 2 Course Outline # 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 Date 01/12 01/14 01/16 01/19 01/21 01/23 01/26 01/28 01/30 02/02 02/04 02/06 02/09 02/11 02/13 02/16 02/18 02/20 02/23 02/25 02/27 03/02 22 03/04 23 03/06 03/09 03/11 03/13 24 03/16 25 03/18 26 03/20 27 03/23 28 03/25 29 03/27 30 03/30 31 04/01 04/03 04/06 Title Introduction Carbohydrates Carbohydrates Martin Luther King Day Carbohydrates Lipids and Their Functions in Biochemical Systems Lipids and Their Functions in Biochemical Systems Lipids and Their Functions in Biochemical Systems Protein Structure and Function Protein Structure and Function EXAM 1 Protein Structure and Function Enzymes Enzymes Enzymes Biosignaling: Neurotransmitters & Hormones Biosignaling: Neurotransmitters & Hormones Biosignaling: Neurotransmitters & Hormones Carbohydrate Metabolism (Glycolysis) EXAM 2 Carbohydrate Metabolism (Glycolysis) Aerobic Respiration & Energy Production (Citric Acid Cycle) Aerobic Respiration & Energy Production (Oxidative Phosphorylation) Carbohydrate Metabolism (Other Pathways) Spring Break Spring Break Spring Break Carbohydrate Metabolism (Other Pathways) Carbohydrate Metabolism (Other Pathways) Fatty Acid Metabolism Fatty Acid Metabolism EXAM 3 Fatty Acid Metabolism Fatty Acid Metabolism Metabolism of Amino Acids Easter Break Easter Break 3 Readings Chap Section Pages 16 16 16.1 – 16.4 16.4 – 16.5 547 – 567 559 – 570 16 17 17 17 18 18 16.5 – 16.6 17.1 – 17.2 17.3 – 17.4 17.5 – 17.6 18.1 – 18.3 18.4 – 18.6 567 – 575 581 – 590 590 – 605 605 – 613 617 – 626 626 – 632 18 19 19 19 Web Web Web 21 18.7 – 18.10 19.1 – 19.6 19.8 – 19.12 19.7 Site Site Site 21.1 – 21.4 633 – 641 649 – 662 666 – 680 663 – 666 Notes Notes Notes 727 – 744 21 22 21.1 – 21.4 22.1 – 22.5 727 – 744 761 – 774 22 22.6 774 – 778 21 21.5 – 21.7 744 – 757 21 Web 23 23 21.5 – 21.7 Site 23.1 – 23.6 23.1 – 23.6 744 – 757 Notes 793 – 816 793 – 816 23 23 18 22 23.1 – 23.6 23.1 – 23.6 18.11 22.7 – 22.8 793 – 816 793 – 816 641 – 645 778 – 790 32 04/08 33 04/10 34 04/13 Metabolism of Amino Acids Introduction to Molecular Genetics – Structure Introduction to Molecular Genetics – DNA Replication 22 20 20 22.7 – 22.8 20.1 – 20.2 20.3 & 20.7 778 – 790 684 – 693 693 – 698 & 708 – 711 35 36 37 38 39 40 41 42 EXAM 4 Introduction to Molecular Genetics – Transcription Introduction to Molecular Genetics – Transcription Introduction to Molecular Genetics – Translation Introduction to Molecular Genetics – Translation Introduction to Molecular Genetics – Recombinant DNA Introduction to Molecular Genetics – Recombinant DNA Catch-Up / Review 20 20 20 20 20 20 20.4 20.4 20.5 – 20.6 20.5 – 20.6 20.8 – 20.10 20.8 – 20.10 698 – 702 698 – 702 702 – 708 702 – 708 711 – 724 711 – 724 04/15 04/17 04/20 04/23 04/24 04/27 04/29 05/01 Cumulative Final Examination - 100 questions Wednesday May 06, 2015 from 8:00 am to 10:00 am ^]^]^]^]^]^]^]^]^]^]^]^]^]^]^]^]^]^]^]^]^] Tutoring – “FREE tutoring will be offered for most freshmen and sophomore-level courses beginning Monday, January 26th in AMU 317. To sign up, students should come to AMU 317 and fill out a Tutor Request Form anytime. Tutorial groups meet for one hour each week and are grouped by subject/instructor. Signing up is voluntary, but attendance is taken. Tutorial groups will continue to open as needed through mid-April. It’s firstcome, first-served, so sign up sooner than later! Any questions call 414-288-3270 or stop in.” (http://www.marquette.edu/oses/index.shtml). Biochemistry is a difficult course for some students. Remember to use all of your resources for learning. Come to the Discussions and ask to have topics that are unclear to you explained again. During discussion we have time to go over any topic or topics at a slower pace and time to answer any and all questions in detail. Contact Dr. Siebenlist after class or during office hours when you have a question or problem. He expects to see students that are having difficulties. Use the Tutoring Sessions as an additional source for explanations, answers, and to reinforce you learning. Dr. Siebenlist and the Tutoring Session Leaders are present to insure that you master the material. Take advantage of your tuition dollars. 4