F List of research products and achievements
Transcription
F List of research products and achievements
F List of research products and achievements 176 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS F.1. COMBINATORICS AND ALGORITHMS F.1 F.1.1 177 Combinatorics and Algorithms Scientific production Publications Peer-reviewed journals (international) [RI1] Y. Afek, E. Gafni, S. Rajsbaum, R. Michel, and C. Travers, The k-simultaneous consensus problem, Distributed Computing, 22 (2010), pp. 185–196. [RI2] A. Akhavi, J.-F. Marckert, and A. Rouault, On the reduction of a random basis, ESAIM: Probability and Statistics, 13 (2009), pp. 437–458. [RI3] F. Alexandre, Cortical basis of communication: local computation, coordination, attention, Neural Networks, 22 (2009), pp. 126–133. [RI4] M. H. Albert, M. D. Atkinson, M. Bouvel, A. Claesson, and M. Dukes, On the inverse image of pattern classes under bubble sort, Journal of Combinatorics, 2 (2011), pp. 231–244. [RI5] M. H. Albert, M. D. Atkinson, M. Bouvel, N. Ruškuc, and V. Vatter, Geometric grid classes of permutations, Transactions of the American Mathematical Society, 365 (2013), pp. 5859–5881. [RI6] L. Alecu, H. Frezza-Buet, and F. Alexandre, Can self-organization emerge through dynamic neural fields computation?, Connection Science, 23 (2011), pp. 1–31. [RI7] D. Alistarh, S. Gilbert, R. Guerraoui, and C. Travers, Generating fast indulgent algorithms, Theory Comput. Syst., 51 (2012), pp. 404–424. [RI8] D. Alistarh, S. Gilbert, R. Guerraoui, and C. Travers, Of choices, failures and asynchrony: The many faces of set agreement, Algorithmica, 62 (2012), pp. 595–629. [RI9] O. Amini, F. Mazoit, N. Nisse, and S. Thomassé, Submodular partition functions, Discrete Mathematics, 309 (2009), pp. 6000–6008. [RI10] A. O. Ardiles, C. C. Tapia-Rojas, M. Mandal, F. Alexandre, A. Kirkwood, N. C. Inestrosa, and A. G. Palacios, Postsynaptic dysfunction is associated with spatial and object recognition memory loss in a natural model of alzheimer’s disease., Proceedings of the National Academy of Sciences, 109 (2012), pp. 13835–40. [RI11] A. Asinowski, G. Barequet, M. Bousquet-Mélou, T. Mansour, and R. Pinter, Orders induced by segments in floorplan partitions and (2-14-3,3-41-2)-avoiding permutations, The Electronic Journal of Combinatorics, 20 (2013). [RI12] H. Attiya, E. Hillel, and A. Milani, Inherent limitations on disjoint-access parallel implementations of transactional memory, Theory Comput. Syst., 49 (2011), pp. 698–719. [RI13] H. Attiya and A. Milani, Transactional scheduling for read-dominated workloads, J. Parallel Distrib. Comput., 72 (2012), pp. 1386–1396. [RI14] J.-C. Aval, On the symmetry of the partition function of some square ice models, Theoretical and Mathematical Physics, 161 (2009), pp. 1582–1589. [RI15] J.-C. Aval and F. Bergeron, Co-quasi-invariant spaces for finite complex reflection groups, Journal of Combinatorial Theory, Series A, 119 (2012), pp. 1432–1446. [RI16] J.-C. Aval, N. Bergeron, and H. Li, Non-commutative combinatorial inverse systems, International Journal of Algebra, 4 (2010), pp. 1003 – 1020. 178 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI17] J.-C. Aval, A. Boussicault, M. Bouvel, and M. Silimbani, Combinatorics of non-ambiguous trees, Advances in Applied Mathematics, 56 (2014), pp. 78–108. [RI18] J.-C. Aval, A. Boussicault, and S. Dasse-Hartaut, Dyck tableaux, Theoretical Computer Science, 502 (2013), pp. 195–209. [RI19] J.-C. Aval, A. Boussicault, and P. Nadeau, Tree-like tableaux, The Electronic Journal of Combinatorics, 20 (2013). [RI20] J.-C. Aval, M. D’Adderio, M. Dukes, A. Hicks, and Y. Le Borgne, Statistics on parallelogram polyominoes and a q, t-analogue of the Narayana numbers, Journal of Combinatorial Theory, Series A, 123 (2014), pp. 271–286. [RI21] J.-C. Aval and P. Duchon, Enumeration of alternating sign matrices of even size (quasi-)invariant under a quarter-turn rotation, Electronic Journal of Combinatorics, 17 (2010). [RI22] J.-C. Aval and P. Duchon, Half-turn symmetric FPLs with rare couplings and tilings of hexagons, Theoretical Computer Science, 502 (2013), pp. 143–152. [RI23] J.-C. Aval and X. G. Viennot, The product of trees in the Loday-Ronco algebra through Catalan alternative tableaux, Seminaire Lotharingien de Combinatoire, 63 (2010). [RI24] A. Bacher, Average site perimeter of directed animals on the two-dimensional lattices, Discrete Mathematics, 312 (2012). [RI25] A. Bacher and M. Bousquet-Mélou, Weakly directed self-avoiding walks, Journal of Combinatorial Theory, Series A, 118 (2011), pp. 2365–2391. [RI26] E. Bampas, D. Bilò, G. Drovandi, L. Gualà, R. Klasing, and G. Proietti, Network verification via routing table queries, Journal of Computer and System Sciences, (2014). [RI27] O. Baudon, J. Bensmail, R. Kalinowski, A. Marczyk, J. Przybylo, and M. Wozniak, On the cartesian product of an arbitrarily partitionable graph and a traceable graph, Discrete Mathematical and Theoretical Computer Science (DMTCS), 16 (2014), pp. 225–232. [RI28] O. Baudon, J. Bensmail, J. Przybylo, and M. Wozniak, Partitioning powers of traceable or hamiltonian graphs, Theoretical Computer Science, 520 (2014). [RI29] O. Baudon, J. Bensmail, J. Przybylo, and M. Wozniak, Partitioning powers of traceable or hamiltonian graphs, Theoritical Computer Science, 520 (2014). [RI30] O. Baudon, J. Bensmail, and E. Sopena, An oriented version of the 1-2-3 conjecture, Discussiones Mathematicae Graph Theory, (2014). [RI31] O. Baudon, F. Foucaud, J. Przybylo, and M. Wozniak, On the structure of arbitrarily partitionable graphs with given connectivity, Discrete Applied Mathematics, 162 (2014), pp. 381–385. [RI32] O. Baudon, F. Gilbert, and M. Wozniak, Recursively arbitrarily vertex-decomposable graphs, Opuscula Mathematica, 32 (2012), pp. 689–706. [RI33] O. Baudon, J. Przybylo, and M. Wozniak, On minimal arbitrarily partitionable graphs, Information Processing Letters, 112 (2012), pp. 697–700. [RI34] F. Bassino, M. Bouvel, A. Pierrot, and D. Rossin, Deciding the finiteness of the number of simple permutations contained in a wreath-closed class is polynomial, Pure Mathematics and Applications, 21 (2011), pp. 119–135. [RI35] F. Bassino, M. Bouvel, and D. Rossin, Enumeration of pin-permutations, Electronic Journal of Combinatorics, 18 (2011). F.1. COMBINATORICS AND ALGORITHMS 179 [RI36] F. Bazzaro and C. Gavoille, Localized and compact data-structure for comparability graphs, Discrete Mathematics, 309 (2009), pp. 3465–3484. [RI37] N. R. Beaton, M. Bousquet-Mélou, J. de Gier, H. Duminil-Copin, and A. J. Guttmann, √ The critical fugacity for surface adsorption of self-avoiding walks on the honeycomb lattice is 1 + 2, Communications in Mathematical Physics, 326 (2014), pp. 727–754. [RI38] L. Beaudou, P. Dorbec, P. Jha, and S. Gravier, On planarity of direct product of multipartite complete graphs, Discrete Mathematics, Algorithms and Applications, 1 (2009), pp. 85–104. [RI39] L. Beaudou, S. Gravier, S. Klavzar, M. Kovse, and M. Mollard, Covering codes in sierpinski graphs, Discrete Mathematics and Theoretical Computer Science, 12 (2010), pp. 63–74. [RI40] O. Beaumont, N. Bonichon, L. Eyraud-Dubois, and P. Uznanski, Broadcasting on large scale heterogeneous platforms under the bounded multi-port model, IEEE Transactions on Parallel and Distributed Systems, (2013). [RI41] O. Beaumont, L. Eyraud-Dubois, H. Rejeb, and C. Thraves-Caro, Heterogeneous resource allocation under degree constraints, IEEE Transactions on Parallel and Distributed Systems, (2012). [RI42] J. Bensmail, On the longest path in a recursively partitionable graph, Opuscula Mathematica, 33 (2013). [RI43] J. Bensmail, On the complexity of partitioning a graph into a few connected subgraphs, Journal of Combinatorial Optimization, (2014). [RI44] J.-C. Bermond, R. Klasing, N. Morales, S. Pérennes, and P. Reyes, Gathering radio messages in the path, Discrete Mathematics, Algorithms and Applications, 5 (2013), pp. 1–28. [RI45] O. Bernardi and N. Bonichon, Catalan’s intervals and realizers of triangulations, Journal of Combinatorial Theory Series A, 116 (2009), pp. 55–75. [RI46] O. Bernardi and M. Bousquet-Mélou, Counting colored planar maps: algebraicity results, Journal of Combinatorial Theory, Series B, 101 (2011), pp. 315–377. [RI47] N. Bonichon, M. Bousquet-Mélou, and E. Fusy, Baxter permutations and plane bipolar orientations, Seminaire Lotharingien de Combinatoire, 61A (2010). [RI48] N. Bonichon, C. Gavoille, N. Hanusse, and L. Perkovic, Tight stretch factors for l1 - and l∞ -delaunay triangulations, Computational Geometry Theory and Applications, (2014). [RI49] M. Bousquet-Mélou, The expected number of inversions after n adjacent transpositions, Discrete Mathematics and Theoretical Computer Science, 12 (2010), pp. 65–88. [RI50] M. Bousquet-Mélou, Families of prudent self-avoiding walks, Journal of Combinatorial Theory Series A, 117 (2010), pp. 313–344. [RI51] M. Bousquet-Mélou, Counting permutations with no long monotone subsequence via generating trees and the kernel method, Journal of Algebraic Combinatorics, 33 (2011), pp. 571–608. [RI52] M. Bousquet-Mélou, On the importance sampling of self-avoiding walks, Combinatorics, Probability and Computing, (2014). [RI53] M. Bousquet-Mélou and G. Chapuy, The vertical profile of embedded trees, The Electronic Journal of Combinatorics, 19 (2012). [RI54] M. Bousquet-Mélou, G. Chapuy, and L.-F. Préville-Ratelle, The representation of the symmetric group on m-Tamari intervals, Advances in Mathematics, 247 (2013), pp. 309–342. 180 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI55] M. Bousquet-Mélou, A. Claesson, M. Dukes, and S. Kitaev, (2+2)-free posets, ascent sequences and pattern avoiding permutations, Journal of Combinatorial Theory, Series A, 117 (2010), pp. 884–909. [RI56] M. Bousquet-Mélou, E. Fusy, and L.-F. Préville Ratelle, The number of intervals in the m-Tamari lattices, The Electronic Journal of Combinatorics, 18 (2012). [RI57] M. Bousquet-Mélou, M. Lohrey, S. Maneth, and E. Noeth, Xml compression via directed acyclic graphs, ACM Transactions on Computer Systems, (2014). [RI58] M. Bousquet-Mélou and M. Mishna, Walks with small steps in the quarter plane, Contemporary Mathematics, 520 (2010), pp. 1–40. [RI59] M. Bousquet-Mélou, J. Propp, and J. West, Perfect matchings for the three-term GaleRobinson sequences, The Electronic Journal of Combinatorics, 16 (2009). [RI60] M. Bousquet-Mélou and K. Weller, Asymptotic properties of some minor-closed classes of graphs, Combinatorics, Probability and Computing, (2014). [RI61] A. Boussicault, Operations on partially ordered sets and rational identities of type A, Discrete Mathematics and Theoretical Computer Science, 15 (2013), pp. 13–32. [RI62] A. Boussicault and V. Féray, Application of graph combinatorics to rational identities of type A, The Electronic Journal of Combinatorics, 16 (2009). [RI63] A. Boussicault, V. Féray, A. Lascoux, and V. Reiner, Linear extension sums as valuations of cones, Journal of Algebraic Combinatorics, 35 (2012), pp. 573–610. [RI64] A. Boussicault, C. Tollu, and J.-G. Luque, Hyperdeterminantal computation for the Laughlin wave function, Journal of Physics A: Mathematical and Theoretical, 42 (2009), pp. 145301.1–145301.13. [RI65] M. Bouvel, C. Chauve, M. Mishna, and D. Rossin, Average-case analysis of perfect sorting by reversals (journal version), Discrete Mathematics, Algorithms and Applications, 03 (2011), pp. 369– 392. [RI66] M. Bouvel and L. Ferrari, On the enumeration of d-minimal permutations, Discrete Mathematics and Theoretical Computer Science, 15 (2013), pp. 33–48. [RI67] M. Bouvel and O. Guibert, Refined enumeration of permutations sorted with two stacks and a D8 -symmetry., Annals of Combinatorics, 18 (2014), pp. 199–232. [RI68] O. Borodin, A. Glebov, M. Montassier, and A. Raspaud, Planar graphs without 5- and 7cycles and without adjacent triangles are 3-colorable., Journal of Combinatorial Theory, Series B, 99 (2009), pp. 668–673. [RI69] O. Borodin, A. Ivanova, M. Montassier, P. Ochem, and A. Raspaud, Vertex decompositions of sparse graphs into an edgeless subgraph and a subgraph of maximum degree at most k, Journal of Graph Theory, 65 (2010), pp. 83–93. [RI70] O. Borodin, A. Ivanova, M. Montassier, and A. Raspaud, (k,1)-coloring of sparse graphs, Discrete Mathematics, 312 (2012), pp. 1128–1135. [RI71] O. Borodin, M. Montassier, and A. Raspaud, Planar graphs without adjacent cycles of length at most seven are 3-colorable, Discrete Mathematics, 310 (2010), pp. 167–173. [RI72] B. Brešar, P. Dorbec, W. Goddard, B. Hartnell, M. Henning, S. Klavzar, and D. Rall, Vizing’s conjecture: A survey and recent results, Journal of Graph Theory, 69 (2012), pp. 46–76. [RI73] B. Brešar, F. Kardoš, J. Katrenič, and G. Semanišin, Minimum k-path vertex cover, Discrete Applied Mathematics, 159 (2011), pp. 1189–1195. F.1. COMBINATORICS AND ALGORITHMS 181 [RI74] N. Broutin and J.-F. Marckert, Asymptotic of trees with a prescribed degree sequence and applications, Random Structures and Algorithms, 44 (2014), pp. 290–316. [RI75] Y. Bu, D. Chen, A. Raspaud, and W. Wang, Injective coloring of planar graphs, Discrete Applied Mathematics, (2009), pp. 663–672. [RI76] Y. Bu, D. W. Cranston, M. Montassier, A. Raspaud, and W. Wang, Star coloring of sparse graphs., Journal of Graph Theory, 62 (2009), pp. 201–219. [RI77] Y. Bu, H. Lu, M. Montassier, A. Raspaud, W. Wang, and Y. Wang, On the 3-colorability of planar graphs without 4-, 7- and 9-cycles, Discrete Mathematics, 309 (2009), pp. 4596–4607. [RI78] Y. Bu, M. Montassier, A. Raspaud, and W. Wang, On backbone coloring of graphs, Journal of Combinatorial Optimization, 23 (2012), pp. 79–93. [RI79] J. Chalopin, E. Godard, and Y. Métivier, Election in partially anonymous networks with arbitrary knowledge in message passing systems, Distributed Computing, 25 (2012), pp. 297–311. [RI80] J. Chalopin and Y. Métivier, On the power of synchronization between two adjacent processes, Distributed Computing, 23 (2010), pp. 177–196. [RI81] J. Chalopin, Y. Métivier, and T. Morsellino, Enumeration and leader election in partially anonymous and multi-hop broadcast networks, Fundamenta Informaticae, 120 (2012), pp. 1–27. [RI82] G. J. Chang, P. Dorbec, H. K. Kim, A. Raspaud, H. Wang, and W. Zhao, Upper k-tuple domination in graphs, Discrete Mathematics and Theoretical Computer Science, 14 (2012), pp. 285– 292. [RI83] G. J. Chang, P. Dorbec, M. Montassier, and A. Raspaud, Generalized power domination of graphs, Discrete Applied Mathematics, 160 (2012), pp. 1691–1698. [RI84] G. Chapuy, V. Féray, and E. Fusy, A simple model of trees for unicellular maps, Journal of Combinatorial Theory, Series A, 120 (2013). [RI85] G. Chapuy, M. Marcus, and G. Schaeffer, A bijection for rooted maps on orientable surfaces, Siam Journal on Discrete Mathematics, 33 (2009), pp. 1587–1611. [RI86] C. Charpentier, M. Montassier, and A. Raspaud, L(p,q)-labeling of sparse graphs, Journal of Combinatorial Optimization, (2012), pp. 001–015. [RI87] M. Chen, M. Montassier, and A. Raspaud, Some structural properties of planar graphs and their applications to 3-choosability, Discrete Mathematics, 312 (2012), pp. 362–373. [RI88] M. Chen and A. Raspaud, Planar graphs without 4, 5 and 8-cycles are acyclically 4-choosable, Electronic Notes in Discrete Mathematics, 34 (2009), pp. 659–667. [RI89] M. Chen, A. Raspaud, and W. Wang, 8-star-choosability of a graph with maximum average degree less than 3, Discrete Mathematics and Theoretical Computer Science, 13 (2011), pp. 97–110. [RI90] R. Cori, Hypermaps and indecomposable permutations, European Journal of Combinatorics, 30 (2009), pp. 540–541. [RI91] R. Cori, Indecomposable permutations, hypermaps and labeled Dyck paths, Journal of Combinatorial Theory(A), 116 (2009), pp. 1326–1343. [RI92] R. Cori, A. Ayyer, and D. Gouyou-Beauchamps, Monotone triangles and 312 pattern avoidance, The Electronic Journal of Combinatorics, 18 (2011). [RI93] R. Cori, M. Marcus, and G. Schaeffer, Odd permutations are nicer than even ones, European Journal of Combinatorics, 33 (2012), pp. 1467–1478. 182 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI94] R. Cori, J. M. Robson, and C. Mathieu, On the number of indecomposable permutations with a given number of cycles, The Electronic Journal of Combinatorics, 19 (2012). [RI95] B. Courcelle, C. Gavoille, and M. M. Kanté, Compact labelings for efficient first-order modelchecking, Journal of Combinatorial Optimization, 21 (2011), pp. 19–46. [RI96] C. Cooper, D. Ilcinkas, R. Klasing, and A. Kosowski, Derandomizing random walks in undirected graphs using locally fair exploration strategies, Distributed Computing, 24 (2011), pp. 91– 99. [RI97] C. Cooper, R. Klasing, and T. Radzik, Locating and repairing faults in a network with mobile agents, Theoretical Computer Science, 411 (2010), pp. 1638–1647. [RI98] S. Coulonges, A. Pecher, and A. Wagler, Triangle-free strongly circular-perfect graphs, Discrete Mathematics, 309 (2009), pp. 3632–3643. [RI99] S. Coulonges, A. Pêcher, and A. Wagler, Characterizing and bounding the imperfection ratio for some classes of graphs, Mathematical Programming, Series A, 118 (2009), pp. 37–46. [RI100] J. Czap, S. Jendrol’, and F. Kardoš, Facial parity edge colouring, Ars Mathematica Contemporanea, 4 (2011), pp. 255–269. [RI101] J. Czap, S. Jendrol’, and F. Kardoš, On the strong parity chromatic number, Discussiones Mathematicae Graph Theory, 31 (2011), pp. 587–600. [RI102] J. Czap, S. Jendrol’, F. Kardoš, and J. Miškuf, Looseness of planar graphs, Graphs and Combinatorics, 27 (2011), pp. 73–85. [RI103] J. Czap, S. Jendrol’, F. Kardoš, and R. Soták, Facial parity edge colouring of plane pseudographs, Discrete Mathematics, 312 (2012), pp. 2735–2740. [RI104] J. Czyzowicz, S. Dobrev, L. Gasieniec, D. Ilcinkas, J. Jansson, R. Klasing, I. Lignos, R. Martin, K. Sadakane, and W.-K. Sung, More efficient periodic traversal in anonymous undirected graphs, Theoretical Computer Science, 444 (2012). [RI105] J. Czyzowicz, D. Ilcinkas, A. Labourel, and A. Pelc, Asynchronous deterministic rendezvous in bounded terrains, Theoretical Computer Science, 412 (2011), pp. 6926–6937. [RI106] J. Czyzowicz, D. Ilcinkas, A. Labourel, and A. Pelc, Worst-case optimal exploration of terrains with obstacles, Information and Computation, 225 (2013), pp. 16–28. [RI107] J. Czyzowicz, A. Kosowski, and A. Pelc, How to meet when you forget: log-space rendezvous in arbitrary graphs, Distributed Computing, 25 (2012), pp. 165–178. [RI108] J. Czyzowicz, A. Kosowski, and A. Pelc, Deterministic rendezvous of asynchronous boundedmemory agents in polygonal terrains, Theory of Computing Systems, 52 (2013), pp. 179–199. [RI109] J. Czyzowicz, A. Kosowski, and A. Pelc, Time vs. space trade-offs for rendezvous in trees, Distributed Computing, (2013). [RI110] O. Delmas, S. Gravier, M. Montassier, and A. Parreau, On two variations of identifying codes, Discrete Mathematics, 311 (2011), pp. 1948–1956. [RI111] O. Delmas and A. Raspaud, Preface, Discrete Mathematics, 309 (2009), pp. 3463 – 3464. [RI112] B. Derbel, M. Mosbah, and A. Zemmari, Sublinear fully distributed partition with applications, Theory of Computing Systems, 47 (2010), pp. 368–404. [RI113] G. Detorakis and N. Rougier, A neural field model of the somatosensory cortex: Formation, maintenance and reorganization of ordered topographic maps, PLoS ONE, 7 (2012). F.1. COMBINATORICS AND ALGORITHMS 183 [RI114] Y. Dieng and C. Gavoille, Routage compact optimal dans les (k, r)-constellations, Technique et Science Informatiques (TSI), 30 (2011), pp. 485–513. [RI115] P. Dorbec and S. Gravier, Paired-domination in subdivided star-free graphs, Graphs and Combinatorics, 26 (2010), pp. 43–49. [RI116] P. Dorbec, S. Gravier, I. Honkala, and M. Mollard, Weighted codes in lee metric, Designs Codes and Cryptography / Designs Codes and Cryptography An International Journal, 52 (2009), pp. 209–218. [RI117] P. Dorbec, B. Hartnell, and M. Henning, Paired versus double domination in k 1,r -free graphs, Journal of Combinatorial Optimization, 27 (2014), pp. 688–694. [RI118] P. Dorbec and M. Henning, Upper paired domination in claw-free graphs, Journal of Combinatorial Optimization, 22 (2011), pp. 235–251. [RI119] P. Dorbec, M. Henning, C. Löwenstein, M. Montassier, and A. Raspaud, Generalized power domination in regular graphs, Siam Journal on Discrete Mathematics, 27 (2013), pp. 1559–1574. [RI120] P. Dorbec, T. Kaiser, M. Montassier, and A. Raspaud, Limits of near-coloring of sparse graphs, Journal of Graph Theory, 75 (2014), pp. 191–202. [RI121] P. Dorbec and S. Klavzar, Generalized power domination: propagation radius and sierpinski graphs, Acta Applicandae Mathematicae, (2014). [RI122] P. Dorbec, M. Montassier, and P. Ochem, Vertex partitions of graphs into cographs and stars, Journal of Graph Theory, 75 (2013), pp. 75–90. [RI123] M. Dolega, V. Féray, and P. Sniady, Explicit combinatorial interpretation of Kerov character polynomials as numbers of permutation factorizations, Advances in Mathematics, 225 (2010), pp. 81– 120. [RI124] A. Doyon, H. Gena, and A. Raspaud, Some bounds on the injective chromatic number of graphs, Discrete Mathematics, (2009). [RI125] E. Duchene and G. Renault, Vertex nim played on graphs, Theoretical Computer Science, 516 (2014), pp. 20–27. [RI126] M. Dukes and Y. Le Borgne, Parallelogram polyominoes, the sandpile model on a complete bipartite graph, and a q, t-Narayana polynomial, Journal of Combinatorial Theory, Series A, 120 (2013), pp. 816–842. [RI127] A. El Hibaoui, Y. Métivier, J. M. Robson, N. Saheb-Djahromi, and A. Zemmari, Analysis of a randomized dynamic timetable handshake algorithm, Pure Mathematics and Applications (Algebra and Theoretical Computer Science), (2009). [RI128] A. El Hibaoui, J. M. Robson, N. Saheb-Djahromi, and A. Zemmari, Uniform election in trees and polyominoids, Discrete Applied Mathematics, (2010), pp. 981–987. [RI129] R. Erman, F. Kardoš, and J. Miškuf, Long cycles in fullerene graphs, Journal of Mathematical Chemistry, 46 (2009), pp. 1103–1111. [RI130] L. Esperet, S. Gravier, M. Montassier, P. Ochem, and A. Parreau, Locally identifying coloring of graphs, The Electronic Journal of Combinatorics, 19 (2012), p. 40. [RI131] L. Esperet, F. Kardoš, A. King, D. Kráľ, and S. Norine, Exponentially many perfect matchings in cubic graphs, Advances in Mathematics, 227 (2011), pp. 1646–1664. [RI132] L. Esperet, F. Kardoš, and D. Kráľ, A superlinear bound on the number of perfect matchings in cubic bridgeless graphs, European Journal of Combinatorics, 33 (2012), pp. 767–798. 184 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI133] L. Esperet, M. Montassier, and X. Zhu, Adapted list colouring of planar graphs, Journal of Graph Theory, 62 (2009), pp. 127–138. [RI134] A. Fernandez Anta, A. Milani, M. A. Mosteiro, and S. Zaks, Opportunistic information dissemination in mobile ad-hoc networks : The profit of global synchrony., Distributed Computing, 25 (2012), pp. 279–296. [RI135] J. Fix, N. P. Rougier, and F. Alexandre, A dynamic neural field approach to the covert and overt deployment of spatial attention, Cognitive Computation, 3 (2011), pp. 279–293. [RI136] P. Flocchini, D. Ilcinkas, A. Pelc, and N. Santoro, Remembering without memory: Tree exploration by asynchronous oblivious robots, Theoretical Computer Science, 411 (2010), pp. 1583–1598. [RI137] P. Flocchini, D. Ilcinkas, A. Pelc, and N. Santoro, How many oblivious robots can explore a line, Information Processing Letters, 111 (2011), pp. 1027–1031. [RI138] P. Flocchini, D. Ilcinkas, A. Pelc, and N. Santoro, Computing without communicating: Ring exploration by asynchronous oblivious robots, Algorithmica, 65 (2013), pp. 562–583. [RI139] P. Flocchini, D. Ilcinkas, and N. Santoro, Ping pong in dangerous graphs: Optimal black hole search with pebbles, Algorithmica, 62 (2012). [RI140] A. Fontaine, Y. Métivier, J. M. Robson, and A. Zemmari, Optimal bit complexity randomised distributed mis and maximal matching algorithms for anonymous rings, Information and Computation, 233 (2013), pp. 32–40. [RI141] F. Foucaud, S. Gravier, R. Naserasr, A. Parreau, and P. Valicov, Identifying codes in line graphs, Journal of Graph Theory, 73 (2013), pp. 425–448. [RI142] F. Foucaud, E. Guerrini, M. Kovse, R. Naserasr, A. Parreau, and P. Valicov, Extremal graphs for the identifying code problem, European Journal of Combinatorics, 32 (2011), pp. 628–638. [RI143] F. Foucaud, R. Klasing, A. Kosowski, and A. Raspaud, On the size of identifying codes in triangle-free graphs, Discrete Applied Mathematics, 160 (2012), pp. 1532–1546. [RI144] F. Foucaud and M. Kovse, Identifying path covers in graphs, Journal of Discrete Algorithms, 23 (2013), pp. 21–34. [RI145] F. Foucaud, R. Naserasr, and A. Parreau, Characterizing extremal digraphs for identifying codes and extremal cases of bondy’s theorem on induced subsets, Graphs and Combinatorics, 29 (2013), pp. 463–473. [RI146] F. V. Fomin, F. Mazoit, and I. Todinca, Computing branchwidth via efficient triangulations and blocks, Discrete Applied Mathematics, 157 (2009), pp. 2726–2736. [RI147] P. Fraigniaud, C. Gavoille, D. Ilcinkas, and A. Pelc, Distributed computing with advice: information sensitivity of graph coloring, Distributed Computing, 21 (2009), pp. 395–403. [RI148] P. Fraigniaud, C. Gavoille, A. Kosowski, E. Lebhar, and Z. Lotker, Universal augmen√ tation schemes for network navigability: Overcoming the n-barrier, Theoretical Computer Science, 410 (2009), pp. 1970–1981. [RI149] P. Fraigniaud, D. Ilcinkas, and A. Pelc, Communication algorithms with advice, Journal of Computer and System Sciences, 76 (2010), pp. 222–232. [RI150] P. Fraigniaud, S. Rajsbaum, and C. Travers, Locality and checkability in wait-free computing, Distributed Computing, 26 (2013), pp. 223–242. [RI151] V. Féray, Stanley’s formula for characters of the symmetric group, Annals of Combinatorics, 13 (2010), pp. 453–461. F.1. COMBINATORICS AND ALGORITHMS 185 [RI152] V. Féray, On complete functions in Jucys-Murphy elements, Annals of Combinatorics, 16 (2012), pp. 677–707. [RI153] V. Féray, Partial Jucys-Murphy elements and star factorizations, European Journal of Combinatorics, 33 (2012), pp. 189–198. [RI154] V. Féray, Asymptotic behavior of some statistics in Ewens random permutations, Electronic Journal of Probability, 18 (2013), pp. 1–32. [RI155] V. Féray and I. P. Goulden, A multivariate hook formula for labelled trees, Journal of Combinatorial Theory, Series A, 120 (2013), pp. 944–959. [RI156] V. Féray and P.-L. Méliot, Asymptotics of q-Plancherel measures, Probability Theory and Related Fields, 152 (2012), pp. 589–624. [RI157] V. Féray and V. Reiner, P-partitions revisited, Journal of commutative algebra, 4 (2012), pp. 101–152. [RI158] V. Féray and P. Sniady, Asymptotics of characters of symmetric groups related to Stanley character formula, Annals of Mathematics, 173 (2011), pp. 887–906. [RI159] V. Féray and P. Sniady, Zonal polynomials via Stanley’s coordinates and free cumulants, Journal of Algebra, 334 (2011), pp. 338–373. [RI160] V. Féray and E. A. Vassilieva, Bijective enumeration of some colored permutations given by the product of two long cycles, Discrete Mathematics, 312 (2012), pp. 279–292. [RI161] C. Gavoille, R. Klasing, A. Kosowski, L. Kuszner, and A. Navarra, On the complexity of distributed graph coloring with local minimality constraints, Networks, 54 (2009), pp. 12–19. [RI162] E. Gafni, A. Mostefaoui, M. Raynal, and C. Travers, From adaptive renaming to set agreement, Theoretical Computer Science, 410 (2009), pp. 1328–1335. [RI163] F. Gilbert, O. Baudon, and M. Wozniak, Recursively arbitrarily vertex-decomposable suns, Opuscula Mathematica, 31 (2011), pp. 533–547. [RI164] V. Gramoli and A. Milani, Wttm 2012, the fourth workshop on the theory of transactional memory, SIGACT News, 43 (2012), pp. 116–122. [RI165] S. Gravier, M. Kovse, M. Mollard, J. Moncel, and A. Parreau, New results on variants of covering codes in sierpinski graphs, Designs, Codes and Cryptography, 69 (2013). [RI166] A. Guignard and E. Sopena, Compound node-kayles on paths, Theoretical Computer Science, 410 (2009), pp. 2033–2044. [RI167] H. Hocquard, Graphs with maximum degree 6 are acyclically 11-colorable, Information Processing Letters, 111(15):748-753, 2011., Volume 111 (2011). [RI168] H. Hocquard and M. Montassier, Every planar graph without cycles of lengths 4 to 12 is acyclically 3-choosable, Information Processing Letters, (2009). [RI169] H. Hocquard and M. Montassier, Adjacent vertex-distinguishing edge coloring of graphs with maximum degree δ, Journal of Combinatorial Optimization, (2012), p. 9. [RI170] H. Hocquard, M. Montassier, A. Raspaud, and P. Valicov, On strong edge-colouring of subcubic graphs, Discrete Applied Mathematics, 161 (2013), pp. 2467–2479. [RI171] H. Hocquard, P. Ochem, and P. Valicov, Strong edge-colouring and induced matchings, Information Processing Letters, 113 (2013), pp. 836–843. [RI172] H. Hocquard and P. Valicov, Strong edge coloring of subcubic graphs, Discrete Applied Mathematics, 159 (2011), pp. 1650–1657. 186 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI173] J. Hromkovič, P. Kanarek, R. Klasing, K. Lorys, W. Unger, and H. Wagener, On the size of permutation networks and consequences for efficient simulation of hypercube algorithms on bounded-degree networks, Siam Journal on Discrete Mathematics, 23 (2009), pp. 1612–1645. [RI174] D. Hudák, F. Kardoš, B. Lužar, R. Soták, and R. Škrekovski, Acyclic edge coloring of planar graphs with delta colors, Discrete Applied Mathematics, 160 (2012), pp. 1356–1368. [RI175] A. Hutt and N. P. Rougier, Activity spread and breathers induced by finite transmission speeds in two-dimensional neural fields, Physical Review E: Statistical, Nonlinear, and Soft Matter Physics, 82 (2010). [RI176] D. Ilcinkas, D. R. Kowalski, and A. Pelc, Fast radio broadcasting with advice, Theoretical Computer Science, 411 (2010), pp. 1544–1557. [RI177] D. Ilcinkas, N. Nisse, and D. Soguet, The cost of monotonicity in distributed graph searching, Distributed Computing, 22 (2009), pp. 117–127. [RI178] C. Johnen, Fast, silent self-stabilizing distance-k independent dominating set construction, Information Processing Letters, 114 (2014), pp. 551–555. [RI179] C. Johnen and F. Mekhaldi, Self-stabilizing with service guarantee construction of 1-hop weightbased bounded size clusters, Journal of Parallel and Distributed Computing, 74 (2014), pp. 1900–1913. [RI180] C. Johnen and L. H. Nguyen, Robust self-stabilizing weight-based clustering algorithm, Theoretical Computer Science, 410 (2009), pp. 581–594. [RI181] C. Joncour and A. Pêcher, Consecutive ones matrices for multi-dimensional orthogonal packing problems, Journal of Mathematical Modelling and Algorithms, 11 (2012), pp. 23–44. [RI182] C. Joncour, A. Pêcher, and P. Valicov, Mpq-trees for the orthogonal packing problem, Journal of Mathematical Modelling and Algorithms, 11 (2012), pp. 3–22. [RI183] F. Kardoš, Fulleroids with dihedral symmetry, Discrete Mathematics, 310 (2010), pp. 652–661. [RI184] F. Kardoš, J. Katrenič, and I. Schiermeyer, On computing the minimum 3-path vertex cover and dissociation number of graphs, Theoretical Computer Science, 412 (2011), pp. 7009–7017. [RI185] F. Kardoš, M. Krnc, B. Lužar, and R. Škrekovski, Cyclic 7-edge-cuts in fullerene graphs, Journal of Mathematical Chemistry, 47 (2010), pp. 771–789. [RI186] F. Kardoš, D. Král’, and J.-S. Sereni, The last fraction of a fractional conjecture, SIAM Journal on Discrete Mathematics, 24 (2010), pp. 699–707. [RI187] F. Kardoš, D. Kráľ, and J. Volec, Fractional colorings of cubic graphs with large girth, Siam Journal on Discrete Mathematics, 25 (2011), pp. 1454–1476. [RI188] F. Kardoš, D. Kráľ, and J. Volec, Maximum edge-cuts in cubic graphs with large girth and in random cubic graphs, Random Structures and Algorithms, 41 (2012), pp. 506–520. [RI189] F. Kardoš and J. Miškuf, Maximum vertex and face degree of oblique graphs, Discrete Mathematics, 309 (2009), pp. 4942–4948. [RI190] R. Kassab and F. Alexandre, Incremental data-driven learning of a novelty detection model for one-class classification with application to high-dimensional noisy data, Machine Learning, 74 (2009), pp. 191–234. [RI191] K. Kabyl, A. Berrachedi, and E. Sopena, A note on the cubical dimension of new classes of binary trees, Czechoslovak Mathematical Journal, (2014). [RI192] O. Khorunzhiy and J.-F. Marckert, Uniform bounds for exponential moment of maximum of a Dyck paths, Electronic Communications in Probability, 14 (2009), pp. 327–333. F.1. COMBINATORICS AND ALGORITHMS 187 [RI193] R. Klasing, A. Kosowski, and A. Navarra, Cost minimisation in wireless networks with a bounded and unbounded number of interfaces, Networks, 53 (2009), pp. 266–275. [RI194] R. Klasing, A. Kosowski, and A. Navarra, Taking advantage of symmetries: Gathering of many asynchronous oblivious robots on a ring, Theoretical Computer Science, 411 (2010), pp. 3235– 3246. [RI195] R. Klasing, Z. Lotker, A. Navarra, and S. Pérennes, From balls and bins to points and vertices, Algorithmic Operations Research, 4 (2009), pp. 133–143. [RI196] W. F. Klostermeyer, G. Macgillivray, A. Raspaud, and E. Sopena, Bounds for the (m,n)mixed chromatic number and the oriented chromatic number, Graph Theory Notes of New York, LXV (2013), pp. 10–14. [RI197] A. Kosowski and A. Navarra, Graph decomposition for memoryless periodic exploration, Algorithmica, 63 (2012), pp. 26–38. [RI198] A. Kosowski, A. Navarra, D. Pajak, and C. Pinotti, Maximum matching in multi-interface networks, Theoretical Computer Science, 507 (2013), pp. 52–60. [RI199] A. Kosowski, A. Navarra, and C. Pinotti, Synchronous black hole search in directed graphs, Theoretical Computer Science, 412 (2011), pp. 5752–5759. [RI200] D. Kral, E. Macajova, O. Pangrac, A. Raspaud, J.-S. Sereni, and M. Skoviera, Projective, affine, and abelian colorings of cubic graphs, European Journal of Combinatorics, 30 (2009), pp. 53–69. [RI201] Y. Le Borgne, L. Lapointe, and P. Nadeau, A normalization formula for the Jack polynomials in superspace and an identity on partitions, The Electronic Journal of Combinatorics, 16 (2009). [RI202] L. Lyaudet, F. Mazoit, and S. Thomassé, Partitions versus sets : a case of duality, European Journal of Combinatorics, (2009), pp. 1–7. [RI203] J.-F. Marckert, Directed animals, quadratic and rewriting systems, The Electronic Journal of Combinatorics, 19 (2012). [RI204] J.-F. Marckert and N. Bonichon, Asymptotics of geometrical navigation on a random set of points of the plane, Advances in Applied Probability, 43 (2011), pp. 899–942. [RI205] J.-F. Marckert and O. Khorunzhiy, Uniform bounds for the exponential moments of the maximum of Dyck paths, Electronic Communications in Probability, 14 (2009), pp. 327–333. [RI206] J.-F. Marckert and G. Miermont, The CRT is the scaling limit of unordered binary trees, Random Structures and Algorithms, 38 (2011), pp. 467–501. [RI207] J.-F. Marckert, M. Reitzner, and I. Barany, Many empty triangles have a common edge, Discrete and Computational Geometry, 50 (2013), pp. 244–252. [RI208] J.-F. Marckert, T. Selig, and Y.-B. Chan, A natural stochastic extension of the sandpile model on a graph, Journal of Combinatorial Theory, Series A, 120 (2013), pp. 1913–1928. [RI209] F. Mazoit, Tree-width of hypergraphs and surface duality, Journal of Combinatorial Theory, Series B, 102 (2010), pp. 671–687. [RI210] A. Maggi, C. Tape, M. Chen, D. Chao, and J. Tromp, An automated data-window selection algorithm for adjoint tomography, Geophysical Journal International, 178 (2009), pp. 257–281. [RI211] R. Milley and G. Renault, Dead ends in misere play: The misere monoid of canonical numbers, Discrete Mathematics, 313 (2013), pp. 2223–2231. 188 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI212] M. Montassier, P. Ossona De Mendez, A. Raspaud, and X. Zhu, Decomposing a graph into forests, Journal of Combinatorial Theory, Series B, 102 (2012), pp. 38–52. [RI213] M. Montassier, A. Raspaud, and X. Zhu, An upper bound on the adaptable choosability of graphs., European Journal of Combinatorics, 30 (2009), pp. 351–355. [RI214] A. Montejano, P. Ochem, A. Pinlou, A. Raspaud, and E. Sopena, Homomorphisms of 2-edge-colored graphs, Discrete Applied Mathematics, 158 (2010), pp. 1365–1379. [RI215] A. Mostefaoui, M. Raynal, and C. Travers, Narrowing power vs efficiency in synchronous set agreement: Relationship, algorithms and lower bound, Theoretical Computer Science, 411 (2010), pp. 58–69. [RI216] Y. Métivier, J. Robson, N. Saheb-Djahromi, and A. Zemmari, On the time and the bit complexity of distributed randomised anonymous ring colouring, Theoretical Computer Science, 502 (2013), pp. 64–75. [RI217] Y. Métivier, J. M. Robson, N. Saheb-Djahromi, and A. Zemmari, About randomised distributed graph colouring and graph partition algorithms, Information and Computation, 208 (2010), pp. 1296–1304. [RI218] Y. Métivier, J. M. Robson, N. Saheb-Djahromi, and A. Zemmari, About randomised distributed graph colouring and graph partition algorithms, Information and Computation, 208 (2010), pp. 1296–1304. [RI219] Y. Métivier, J. M. Robson, N. Saheb-Djahromi, and A. Zemmari, An optimal bit complexity randomised distributed mis algorithm, Distributed Computing, 23 (2011), pp. 331–340. [RI220] R. Naserasr, E. Rollova, and E. Sopena, Homomorphisms of planar signed graphs to signed projective cubes, Discrete Mathematics and Theoretical Computer Science, 15 (2013), pp. 1–12. [RI221] R. Naserasr, E. Rollova, and E. Sopena, Homomorphisms of signed graphs, Journal of Graph Theory, (2014). [RI222] R. J. Nowakowski, G. Renault, E. Lamoureux, S. Mellon, and T. Miller, The game of timber!, Journal of Combinatorial Mathematics and Combinatorial Computing, 85 (2013), pp. 213–225. [RI223] N. Ouled Abdallah, H. Hadj Kacem, M. Mosbah, and A. Zemmari, Randomized broadcasting in wireless mobile sensor networks, Concurrency and Computation: Practice and Experience, 25 (2013), pp. 203–217. [RI224] F. Pakovich, C. Pech, and A. Zvonkine, Laurent polynomial moment problem : a case study, Contemporary Mathematics, 532 (2010), pp. 177–194. [RI225] F. Pakovich and A. Zvonkine, Minimum degree of the difference of two polynomials over q, and weighted plane trees, Selecta Mathematica (New Series), (2014), pp. 1–63. [RI226] P. R. Parvédy, M. Raynal, and C. Travers, Strongly terminating early-stopping ıt k-set agreement in synchronous systems with general omission failures, Theory Comput. Syst., 47 (2010), pp. 259– 287. [RI227] A. Pêcher, C. Bachoc, and A. Thiery, On the theta number of powers of cycle graphs, Combinatorica, 33 (2013), pp. 297–317. [RI228] A. Pêcher, G. J. Chang, M. Montassier, and A. Raspaud, Strong chromatic index of planar graphs with large girth, Discussiones Mathematicae Graph Theory, (2014). [RI229] A. Pêcher and A. Wagler, On facets of stable set polytopes of claw-free graphs with stability number three, Discrete Mathematics, 310 (2010), pp. 493–498. F.1. COMBINATORICS AND ALGORITHMS 189 [RI230] A. Pêcher and A. Wagler, Polynomial time computability of some graph parameters for superclasses of perfect graphs, International Journal of Mathematics in Operational Research, 4 (2012), pp. 263–275. [RI231] A. Pêcher and A. Wagler, Computing clique and chromatic number of circular-perfect graphs in polynomial time, Mathematical Programming A, 141 (2013), pp. 121–133. [RI232] A. Pêcher and A. Wagler, Computing the clique number of a-perfect graphs in polynomial time, European Journal of Combinatorics, 35 (2014), pp. 449–458. [RI233] A. Raspaud, H. Schroder, O. Sykora, L. Torok, and I. Vrto, Antibandwidth and cyclic antibandwidth of meshes and hypercubes, Discrete Mathematics, (2009), pp. 3541–3552. [RI234] A. Raspaud and J. Wu, Game chromatic number of toroidal grids, Electronic Notes in Discrete Mathematics, 34 (2009), pp. 381–385. [RI235] D. Renault and J.-F. Marckert, Compact convex sets of the plane and probability theory, ESAIM: Probability and Statistics, (2014), p. 34. [RI236] N. Rougier, Higher quality 2d text rendering, Journal of Computer Graphics Techniques, 2 (2013), pp. 50–64. [RI237] N. Rougier, Shader-based antialiased dashed stroked polylines, Journal of Computer Graphics Techniques, 2 (2013), pp. 91–107. [RI238] N. Rougier and J. Fix, Dana: Distributed (asynchronous) numerical and adaptive modelling framework, Network: Computation in Neural Systems, 23 (2012), pp. 237–253. [RI239] N. P. Rougier, Implicit and explicit representations, Neural Networks, 22 (2009), pp. 155–160. [RI240] N. P. Rougier and Y. Boniface, Dynamic self-organising map, Neurocomputing, 74 (2011), pp. 1840–1847. [RI241] N. P. Rougier and A. Hutt, Synchronous and asynchronous evaluation of dynamic neural fields, The Journal of Difference Equations and Applications, In press (2010). [RI242] B. Seamone and B. Stevens, Sequence variations of the 1-2-3 conjecture and irregularity strength, Discrete Mathematics and Theoretical Computer Science, 15 (2013), pp. 15–28. [RI243] S. Sen, L(2, 1)-labelings of some families of oriented planar graphs, Discussiones Mathematicae Graph Theory, (2014), pp. 31–48. [RI244] E. Sopena, Upper oriented chromatic number of undirected graphs and oriented colorings of product graphs, Discussiones Mathematicae Graph Theory, 32 (2012), pp. 517–533. [RI245] E. Sopena, Complete oriented colourings and the oriented achromatic number, Discrete Applied Mathematics, 173 (2014), pp. 102–112. [RI246] E. Sopena and J. Wu, Coloring the square of the cartesian product of two cycles, Discrete Mathematics, 310 (2010), pp. 2327–2333. [RI247] E. Sopena and J. Wu, The incidence chromatic number of toroidal grids, Discussiones Mathematicae Graph Theory, 33 (2013), pp. 315–327. [RI248] W. Taouali, T. Vieville, N. P. Rougier, and F. Alexandre, No clock to rule them all, Journal of Physiology - Paris, 105 (2011), pp. 83–90. [RI249] A. Wade, Exploration des graphes dynamiques t-intervalle-connexes, Colloque National sur la Recherche en Informatique et ses Applications (CNRIA), 5 (2013), pp. 78–85. [RI250] A. Zvonkine, Functional composition is a generalized symmetry, Symmetry : Culture and Science, 22 (2011), pp. 391–426. 190 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Peer-reviewed journals (national) [RN1] X. G. Viennot, Des arbres dans les étoiles, des arbres dans les grains de lumière, Tangente, (2009), pp. 44–47. Contributed volumes (national) [ON1] T. Le Goff, F. Dugeny, S. Scherer, C. Loudier-Malgouyres, G. Franc, A. Wyvekens, V. Malochet, C. Mouhanna, N. Comte, and M. Marcus, Les villes face à l’insécurité. Actes de la table ronde du 25 octobre 2010, IAU-IDF, 2011. [ON2] A. Zvonkine and S. Lando, Graphes sur les surfaces et leurs applications, Centre d’éducation continue en mathématiques de Moscou, 2010. Chapters in contributed volumes (international) [CHI1] V. Andova, F. Kardoš, and R. Škrekovski, Fullerene graphs and some relevant graph invariants, in Topics in Chemical Graph Theory, I. Gutman, ed., University of Kragujevac and Faculty of Science Kragujevac, 2014, pp. 39–54. [CHI2] O. Beaumont and L. Marchal, Steady-state scheduling, in Introduction To Scheduling, Y. Robert and F. Vivien, eds., Taylor and Francis, 2009. [CHI3] N. Bonichon, C. Gavoille, and N. Hanusse, An information-theoretic upper bound on planar graphs using well-orderly maps, in Towards an Information Theory of Complex Networks, M. Dehmer, F. Emmert-Streib, and A. Mehler, eds., Birkhäuser Boston, 2011, pp. 17–46. [CHI4] M. Bousquet-Mélou and R. Brak, Exactly solved models of polyominoes and polygons, in Polygons, Polyominoes and Polycubes, Springer Berlin / Heidelberg, 2009, pp. 43–78. [CHI5] V. Bonifaci, R. Klasing, P. Korteweg, L. Stougie, and A. Marchetti-Spaccamela, Data gathering in wireless networks, in Graphs and Algorithms in Communication Networks, A. Koster and X. Munoz, eds., Springer-Verlag, 2010, pp. 357–377. [CHI6] I. Caragiannis, M. Flammini, C. Kaklamanis, R. Klasing, and A. Navarra, Energy consumption minimization in ad hoc wireless and multi-interface networks, in Graphs and Algorithms in Communication Networks, A. Koster and X. Munoz, eds., Springer-Verlag, 2010, pp. 335–355. [CHI7] L. Eyraud-Dubois and A. Legrand, The impact of platform models on scheduling techniques, in Introduction to Scheduling, Y. Robert and F. Vivien, eds., Taylor and Francis, 2009. [CHI8] C. Gavoille, B. Patt-Shamir, and C. Scheideler, Special issue: Parallelism on algorithms and architectures (spaa ’07), in Theory of Computing Systems, Springer, 2010, pp. 809–962. [CHI9] A. Hutt and N. P. Rougier, Numerical simulation scheme of one-and two-dimensional neural fields involving space-dependent delays, in Neural Field Theory, P. B. Graben, S. Coombes, R. Potthast, and J. Wright, eds., Springer, 2014. [CHI10] S. Jendrol’ and F. Kardoš, Symmetry of fulleroids, in Handbook of Nanophysics: Clusters and Fullerenes, K. D. Sattler, ed., CRC Press, 2010, pp. 28–1 – 28–13. [CHI11] A. Pêcher and A. Wagler, Beyond perfection: Computational results for superclasses, in Facets of Combinatorial Optimization - Festschrift for Martin Grötschel, M. Jünger and G. Reinelt, eds., Springer, 2013, pp. 133–161. [CHI12] W. Taouali, N. Rougier, and F. Alexandre, Visual target selection emerges from a bioinspired network topology, in Studies in Computational Intelligence, J. Kacprzyk, ed., Springer Verlag, 2012. BIBLIOGRAPHY 191 [CHI13] V. Vèque, F. Kaisser, C. Johnen, and A. Busson, Convoy: a new cluster-based routing protocol for vehicular networks, in Models and algorithms for vehicular networks, H. Labiod and A. Beylot, eds., ISTE Publishing Knowledge /John Wiley and Sons Inc, 2013, pp. 91–102. Chapters in contributed volumes (national) [CHN1] F. Alexandre, Une approche systémique du réseau cérébral, in Les Réseaux, E. Letonturier, ed., CNRS Editions, 2012, pp. 129–140. [CHN2] V. Vèque, F. Kaisser, C. Johnen, and A. Busson, Convoi : un protocole de formation de clusters pour les réseaux de véhicules, in Modèles et algorithmes pour les réseaux véhiculaires, H. Labiod and A. Beylot, eds., Hermès, 2013, pp. 1–15. Editors of contributed volumes (international) [DI1] S. Abramski, C. Gavoille, C. Kirchner, F. Meyer auf der Heide, and P. G. Spirakis, Proceedings of the 37th International Colloquium on Automata, Languages and Programming, ICALP 2010, Bordeaux, France, July 6-10, 2010, Part I & II. Volume 6198 & 6199 of Lecture Notes in Computer Science (ARCoSS), Springer, 2010. [DI2] O. Delmas and A. Raspaud, 7th International Colloquium on Graph Theory - ICGT 05, Discrete Mathematics - Volume 309, Issue 11, Pages 3463-3732 - Elsevier B.V., 2009. [DI3] P. Fraigniaud and C. Gavoille, Proceedings of the 30th Annual ACM Symposium on Principles of Distributed Computing (PODC), San Jose, CA, USA, ACM Press, 2011. [DI4] R. Klasing, Experimental Algorithms - 11th International Symposium, SEA 2012, Bordeaux, France, June 7-9, 2012. Proceedings, Springer Verlag, 2012. [DI5] A. Kosowski and M. Yamashita, Structural Information and Communication Complexity. 18th International Colloquium, SIROCCO 2011, Gdańsk, Poland, June 26-29, 2011, vol. 6796, Springer, 2011. Invited conference talks (international) [II1] F. Alexandre, Modeling thalamocortical loops, in French-Chinese workshop in Computational Neuroscience, 2012. [II2] F. Alexandre, A computational model of the amygdala revisits pavlovian learning, in Sino-French International Workshop on Computational Neuroscience, 2014. [II3] M. Bousquet-Mélou, The expected inversion number after n adjacent transpositions, in Aurora borealis combinatorics, 2010. [II4] M. Bousquet-Mélou, Sur les chemins auto-évitants, in Journées MAS, (Modélisation Aléatoire et Statistique), 2010. [II5] M. Bousquet-Mélou, Counting planar maps, coloured or uncoloured, in Surveys in combinatorics 2011, vol. 392 of London Math. Soc. Lecture Note Ser, 2011, pp. 1–50. [II6] M. Bousquet-Mélou, Enumeration with catalytic parameters (3 exposés), in Séminaire Lotharingien de Combinatoire, 2011. [II7] M. Bousquet-Mélou, Lattice paths everywhere, in Philippe Flajolet and Analytic Combinatorics, 2011. [II8] M. Bousquet-Mélou, The Potts model on planar maps, in Stochastic analysis, 2011. [II9] M. Bousquet-Mélou, Exactly solvable models of self-avoiding walks, in Program ’Random spatial processes’, Atelier ’Connections for Women’, 2012. 192 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [II10] M. Bousquet-Mélou, Intervals in the m-Tamari lattices, in Aurora borealis combinatorics, 2012. [II11] M. Bousquet-Mélou, The number of inversions after n adjacent transpositions, in Algorithms and Permutations, 2012. [II12] M. Bousquet-Mélou, Philippe Flajolet, founder of analytic combinatorics, in Program ’Random spatial processes’, Atelier ’Lattice Models and Combinatorics’, 2012. [II13] M. Bousquet-Mélou, Asymptotic properties of some minor-closed classes of graphs, in Winter Combinatorics Meeting, 2013. [II14] M. Bousquet-Mélou, The critical fugacity for surface adsorption of self-avoiding walks on the √ honeycomb lattice is 1 + 2, in Workshop on random polymers, 2013. [II15] M. Bousquet-Mélou, On two-dimensional self-avoiding walks, in Formal power series and algebraic combinatorics, 2013. [II16] M. Bousquet-Mélou, Spanning forests in regular planar maps, in Workshop on Combinatorial Physics, 2013. [II17] M. Bousquet-Mélou, Two-dimensional self-avoiding walks, in Autumn school "ALEA in Europe", 2013. [II18] R. Cori, A combinatorial game on graphs allowing to visit some chapters of algebra in an elementary way, in Colloque de Mathématiques, 2013. [II19] R. Cori, Dyck paths and the rank in complete graphs, in Labyrinth Day, 2014. [II20] C. Gavoille, Dynamic algorithms via forbidden-set labeling, in First International Workshop on Dynamic Systems (DYNAM), 2011. [II21] C. Gavoille, Progress and challenges for labeling schemes, in First International Workshop on Advances in Distributed Graph Algorithms (ADGA), 2012. [II22] C. Gavoille, Labeling schemes with forbidden-sets, in 20th International Colloquium on Structural Information & Communication Complexity (SIROCCO), vol. 8179 of Lecture Notes in Computer Science, Springer, 2013. [II23] R. Klasing, Derandomizing random walks in undirected graphs using locally fair exploration strategies, in Workshop on "Dynamic Communication Networks", 2009. [II24] R. Klasing, Cost minimization in multi-interface networks, in SNOW - 2nd Nordic Workshop on, System and Network Optimization for Wireless, 2011. [II25] R. Klasing, Efficient exploration of anonymous undirected graphs, in IWOCA - 24th International Workshop on Combinatorial Algorithms, 2013. [II26] R. Klasing, The multi-agent rotor-router on the ring: A deterministic alternative to parallel random walks, in MAC - Workshop on Distributed Computing by Mobile Robots, 2013. [II27] R. Klasing, Tutoriel : "mobile agent computing", in ROADEF - 15ème congrès annuel de la Société française de recherche opérationnelle et d’aide à la décision, 2014. [II28] M. Montassier, The 3-color problem, in 2009 Workshop on Graph Theory, 2009. [II29] M. Montassier, Limits of near-coloring of sparse graphs, in 2012 International Conference on Graph Theory, Combinatorics and Applications, 2012. [II30] A. Pêcher, Circular-clique polytopes and circular-perfect graphs, in 2009 Workshop on Graph Theory, 2009. F.1. COMBINATORICS AND ALGORITHMS 193 [II31] A. Pêcher, On the lovasz’s theta function of power of chordless cycles, in 2010 International Conference on Graph Theory, Combinatorics and Applications, 2010. [II32] A. Pêcher, The circular chromatic number of circular-perfect graphs is polytime, in 2011 Workshop on Graph Theory, 2011. [II33] A. Pêcher, How unique is lovasz’s theta function?,, in 2012 International Conference on Graph Theory, Combinatorics and Applications, 2012. [II34] A. Pêcher, Interval graphs for orthogonal packing problems, in International Conference in Discrete Mathematics, 2013. [II35] N. Rougier, Cortical plasticity: A computational approach, in 6th Workshop of the Computational Neuroscience Network, 2014. [II36] E. Sopena, Homomorphisms of signed graphs, in Colourings, Independence and Domination 15th WORKSHOP ON GRAPH THEORY, 2013. [II37] X. G. Viennot, At the crossroad of algebra, combinatorics and physics: a story of the mysterious and ubiquitous sequence 1, 2, 7, 42, 429, ..., in Colloquium Mathematics CIUL, Complexo Interdisciplinar Universidade de Lisboa, 2009. [II38] X. G. Viennot, Combinatorial aspects of continued fractions and applications, in colloque PFAC "Philippe Flajolet and analytic combinatorics", 2011. [II39] X. G. Viennot, The beauty of mathematics, in Conférence spéciale pour les élèves du "Pope John-Paul II College of Education" Pondicherry, 2012. [II40] X. G. Viennot, Combinatorial operators and quadratic algebra, in Colloquium IMSc, Institute of Mathematical Science, Chennai, 2012. [II41] X. G. Viennot, Combinatorics of orthogonal polynomials and exclusion processes in physics, in conference ICTS-TIFR "Random matrix theory and applications", 2012. [II42] X. G. Viennot, The combinatorics of some exclusion model in physics, in Colloquium de physique, IIT Madras (Indian Institute of Technnology), 2012. [II43] X. G. Viennot, Quadratic algebra, combinatorial physics and planar automata, in séminaire, Chennai Mathematical Institute (CMI), 2012. [II44] X. G. Viennot, 3n , in Colloquium de Physique Théorique, TIFR (Tata Institute of Fundamental Research) Bombay, 2013. [II45] X. G. Viennot, Canopy of binary trees and intervals in associahedra, in Workshop "Recent trends in Algebraic Combinatorics and Geometric Combinatorics", ICMAT, Cantoblanco Campus, 2013. [II46] X. G. Viennot, Canopy of binary trees and intervals in associahedra, in Instituto Coloquio, de la Universidad de Talca, 2013. [II47] X. G. Viennot, The combinatorics of some exclusion model in physics, in colloquium université La Spienza, 2013. [II48] X. G. Viennot, From automata to RSK correspondance, in Journées Christophe Reutenauer, "Words, Codes and Algebraic Combinatorics", 2013. [II49] X. G. Viennot, Quadratic algebra, combinatorial physics and planar automata, in Random Interactions seminar, TIFR (Tata institute of Fundamental Research) Bombay, 2013. [II50] X. G. Viennot, The Strahler analysis of binary trees in computer science and in other sciences, in Colloquium d’Informatique, IIT Bombay (Indian Institute of Mathematics), 2013. 194 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [II51] X. G. Viennot, The Strahler analysis of binary trees in computer science and in other sciences, in Computer science seminar, TIFR (Tata Institute of Fundamental Research) Bombay, 2013. [II52] X. G. Viennot, Trees in various sciences, in Institute Colloquium, IIT Bombay (Indian Institute of Tehnology), 2013. [II53] X. G. Viennot, At the crossroad of algebra, combinatorics, probabilities and physics: a toy exclusion model, in Mathematisches Kolloquium, Universität Wien, 2014. [II54] X. G. Viennot, Heaps of pieces and 2d lorentzian quantum gravity, in Workshop on "2D quantum gravity and statistical mechanics, Erwin Schrödinger Institute, 2014. [II55] X. G. Viennot, Tamari lattice, m-Tamari, (a, b)-Tamari and beyond, in Enumerative Combinatorics, 2014. [II56] X. G. Viennot, C. Krattenthaler (piano), G. Duchamp (violon), and M. Pig Lagos (textes, Poèmes), Des arbres dans les étoiles, des arbres dans les grains de lumière, in Cycle de conférences "Les mathématiques: fascinantes et omniprésentes", Salon rouge, Institut français de Vienne, 2014. [II57] X. G. Viennot and M. Pig Lagos (textes, Poèmes), Árboles in la estrellas, Árboles in los granos de luz (le belleza matemática de los árboles), in "Conferencia, Musica, Poesia" au Centre Culturel, Salón Abate, Univeridad Talca, Chili, 2013. [II58] A. Zvonkine, Fonctions de Belyi : exemples, propriétés et applications, in Journées de Géométrie Algorithmique, 2010. [II59] A. Zvonkine, Theory of dessins d’enfants, in Master-class: Teichmüller theories, 2014. around Thurston-Grothendieck- Invited conference talks (national) [IN1] M. Bousquet-Mélou, Permutations sans longue sous-suite croissante : aspects combinatoires, in ALEA, 2009. [IN2] M. Bousquet-Mélou, Chemins dans un quart de plan, in ALEA, 2011. [IN3] M. Bousquet-Mélou, Le modèle de Potts sur les cartes planaires, in Journées de Combinatoire de Bordeaux, 2012. [IN4] M. Bousquet-Mélou, Familles de graphes à mineurs exclus : une introduction à la combinatoire énumérative et analytique, in Forum des jeunes mathématicien-ne-s, 2013. [IN5] C. Gavoille, Oracles pour les arbres et les graphes, in 10 ans du séminaire MaMux - Mathématiques, musique et relations avec d’autres disciplines, 2011. [IN6] N. Rougier, Le rôle des corps dans la cognition humaine, in Forum des Sciences Cognitives, 2014. [IN7] X. G. Viennot, Au carrefour de l’algèbre, la combinatoire et la physique: une petite histoire de la mystérieuse suite 1, 2, 7, 42, 429, ..., in Colloquium Mathématiques, Université de Lyon, 2009. [IN8] X. G. Viennot, The cellular ansatz, in Séminaire Algo, INRIA Rocquencourt, 2009. [IN9] X. G. Viennot, Des arbres dans les étoiles, des arbres dans les grains de lumière, in Fête à Fermat, 2009. [IN10] X. G. Viennot, Des cartes, des permutations, des bijections, des fractions continues: old and new., in Journées Robert Cori, 2009. BIBLIOGRAPHY 195 [IN11] X. G. Viennot, Les nouvelles mathématiques combinatoires: renaissance ou révolution ?, in Conférences de vulgarisation scientifique au Lycée de Quimper, Prépas Scientifiques Brizeux, Ouverture au monde des sciences, 2011. [IN12] X. G. Viennot, Physique combinatoire et algèbres quadratiques, in Colloquium de Mathématiques de l’Université de Nice, 2011. [IN13] X. G. Viennot, Algèbres d’opérateurs et physique combinatoire, in Colloquium de l’Institut de Mathématiques de Jussieu, 2012. [IN14] X. G. Viennot, The combinatorics of some exclusion model in physics, in Séminaire de la Fédération PhysStat-Sud/Orsay/Saclay/X, 2012. [IN15] X. G. Viennot, La magie des tableaux de Young, in Jounées nationales de l’APMEP, 2013. [IN16] X. G. Viennot, Les nombres de Catalan et les preuves sans mots, in Journées nationales de l’APMEP, 2013. [IN17] X. G. Viennot, Couplages dans les graphes, in Jounées jeunes chercheurs lycéens 2014, 2014. [IN18] X. G. Viennot and G. Duchamp (violon), Des preuves sans mots, in conférence de cloture des journées nationales de l’APMEP, 2012. [IN19] X. G. Viennot and G. Duchamp (violon), Pavages, formules magiques et preuves sans mots, in Jounée Trophées Kangourou, 2014. [IN20] X. G. Viennot, G. Duchamp (violon), and M. Pig Lagos (textes, Poèmes), Des arbres dans les étoiles, des arbres dans les grains de lumière, in Conférence grand public à Nancy, cycle de conférences "Science et Société", 2013. Conferences with published proceedings (international) [CI1] S. Abbas, M. Mosbah, and A. Zemmari, A generic distributed algorithm for computing by random mobile agents, in Proceedings PRIMA, vol. 5044 of Lecture Notes in Artificial Intelligence, Springer, 2009, pp. 392–397. [CI2] I. Abraham, S. Chechik, and C. Gavoille, Fully dynamic approximate distance oracles for planar graphs via forbidden-set distance labels, in 44th Annual ACM Symposium on Theory of Computing (STOC), ACM, ed., 2012, pp. 1199–1217. [CI3] I. Abraham, S. Chechik, C. Gavoille, and D. Peleg, Forbidden-set distance labels for graphs of bounded doubling dimension, in 29th Annual ACM Symposium on Principles of Distributed Computing (PODC), ACM Press, 2010, pp. 192–200. [CI4] I. Abraham and C. Gavoille, On approximate distance labels and routing schemes with affine stretch, in 25th International Symposium on Distributed Computing (DISC), vol. 6950 of Lecture Notes in Computer Science (ARCoSS), Springer, 2011, pp. 404–415. [CI5] I. Abraham, C. Gavoille, A. Gupta, O. Neiman, and K. Talwar, Cops, robbers, and threatening skeletons: Padded decomposition for minor-free graphs, in 46th Annual ACM Symposium on Theory of Computing (STOC), ACM Press, 2014, pp. 79–88. [CI6] C. Aguerre, T. Morsellino, and M. Mosbah, Debugging the execution of distributed algorithms over anonymous networks, in Proceedings of the International Conference on Information Visualisation, 2012, pp. 464–470. [CI7] C. Aguerre, T. Morsellino, and M. Mosbah, Fully-distributed debugging and visualization of distributed systems in anonymous networks, in Proceedings of the International Conference on Information Visualization Theory and Applications, R. S. L. P. Richard, M. Kraus and J. Braz, eds., INSTICC, 2012, pp. 764–767. 196 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI8] F. Alexandre, Usefulness of emotions in robots, in International Society for Research on Emotion Conference, 2009. [CI9] M. Albert and M. Bousquet-Mélou, Permutations sortable by two stacks in parallel and quarter plane walks (conference version), in Formal power series and algebraic combinatorics 2014, 2014, pp. 51–62. [CI10] M. H. Albert and M. Bouvel, Operators of equivalent sorting power and related wilf-equivalences, in Discrete Mathematics & Theoretical Computer Science (DMTCS), vol. AS, 2013, pp. 671–682. [CI11] D. Alistarh, H. Attiya, R. Guerraoui, and C. Travers, Early deciding synchronous renaming in o( logf ) rounds or less, in SIROCCO, G. Even and M. M. Halldórsson, eds., vol. 7355 of Lecture Notes in Computer Science, Springer, 2012, pp. 195–206. [CI12] D. Alistarh, S. Gilbert, R. Guerraoui, and C. Travers, Of choices, failures and asynchrony: The many faces of set agreement, in ISAAC, Y. Dong, D.-Z. Du, and O. H. Ibarra, eds., vol. 5878 of Lecture Notes in Computer Science, Springer, 2009, pp. 943–953. [CI13] D. Alistarh, S. Gilbert, R. Guerraoui, and C. Travers, Generating fast indulgent algorithms, in ICDCN, M. K. Aguilera, H. Yu, N. H. Vaidya, V. Srinivasan, and R. R. Choudhury, eds., vol. 6522 of Lecture Notes in Computer Science, Springer, 2011, pp. 41–52. [CI14] A. F. Anta, A. Milani, M. A. Mosteiro, and S. Zaks, Opportunistic information dissemination in mobile ad-hoc networks: The profit of global synchrony, in DISC, N. A. Lynch and A. A. Shvartsman, eds., vol. 6343 of Lecture Notes in Computer Science, Springer, 2010, pp. 374–388. [CI15] I. Atsonios, O. Beaumont, N. Hanusse, and Y. Kim, On power-law distributed balls in bins and its applications to view size estimation, in ISAAC, 2011. [CI16] H. Attiya, V. Gramoli, and A. Milani, A provably starvation-free distributed directory protocol, in SSS, S. Dolev, J. A. Cobb, M. J. Fischer, and M. Yung, eds., vol. 6366 of Lecture Notes in Computer Science, Springer, 2010, pp. 405–419. [CI17] H. Attiya, E. Hillel, and A. Milani, Inherent limitations on disjoint-access parallel implementations of transactional memory, in SPAA, F. Meyer auf der Heide and M. A. Bender, eds., ACM, 2009, pp. 69–78. [CI18] H. Attiya and A. Milani, Transactional scheduling for read-dominated workloads, in OPODIS, T. F. Abdelzaher, M. Raynal, and N. Santoro, eds., vol. 5923 of Lecture Notes in Computer Science, Springer, 2009, pp. 3–17. [CI19] J.-C. Aval, A. Boussicault, M. Bouvel, and M. Silimbani, Combinatorics of non-ambiguous trees, in Discrete Mathematics & Theoretical Computer Science (DMTCS), vol. AS, 2013, pp. 49–60. [CI20] J.-C. Aval and P. Duchon, Enumeration of alternating sign matrices of even size (quasi-)invariant under a quarter-turn rotation, in 21th Annual International Conference on Formal Power Series and Algebraic Combinatorics (FPSAC 2009), DMTCS proceedings, 2009. [CI21] J.-C. Aval, Y. Le Borgne, M. D’Adderio, M. Dukes, and A. Hicks, A q, t-analogue of the Narayana numbers, in FPSAC 2013, 2013, pp. 623–634. [CI22] J.-C. Aval, J.-C. Novelli, and J.-Y. Thibon, The # product in combinatorial Hopf algebras, in 23rd International Conference on Formal Power Series and Algebraic Combinatorics, DMTCS, 2011, pp. 75–86. [CI23] A. Bacher, Directed and multi-directed animals on the king’s lattice, in The Seventh European Conference on Combinatorics, Graph Theory and Applications, vol. 16, 2013. [CI24] A. Bacher and M. Bousquet-Mélou, Weakly directed self-avoiding walks (conference version), in Formal power series and algebraic combinatorics 2010, DMTCS Proceedings, 2010. F.1. COMBINATORICS AND ALGORITHMS 197 [CI25] E. Bampas, D. Bilò, G. Drovandi, L. Gualà, R. Klasing, and G. Proietti, Network verification via routing table queries, in Proceedings of the 18th International Colloquium on Structural Information and Communication Complexity, vol. 6796 of Lecture Notes in Computer Science, 2011, pp. 270–281. [CI26] E. Bampas, J. Czyzowicz, L. Gasieniec, D. Ilcinkas, and A. Labourel, Almost optimal asynchronous rendezvous in infinite multidimensional grids, in Proceedings of the 24th International Symposium on Distributed Computing, vol. 6343 of Lecture Notes in Computer Science, Springer Berlin / Heidelberg, 2010, pp. 297–311. [CI27] E. Bampas, L. Gasieniec, N. Hanusse, D. Ilcinkas, R. Klasing, and A. Kosowski, Euler tour lock-in problem in the rotor-router model, in Proceedings of the 23rd International Symposium on Distributed Computing, vol. 5805 of Lecture Notes in Computer Science, Springer Berlin / Heidelberg, 2009, pp. 421–433. [CI28] E. Bampas, L. Gasieniec, R. Klasing, A. Kosowski, and T. Radzik, Robustness of the rotorrouter mechanism, in Proceedings of the 13th International Conference on Principles of Distributed Systems, vol. 5923 of Lecture Notes in Computer Science, Springer Berlin / Heidelberg, 2009, pp. 345– 358. [CI29] M. Barjon, A. Casteigts, S. Chaumette, C. Johnen, and Y. M. Neggaz, Un algorithme de test pour la connexité temporelle des graphes dynamiques de faible densité, in ALGOTEL 2014 – 16èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications, 2014, pp. 1–4. [CI30] F. Bassino, M. Bouvel, A. Pierrot, C. Pivoteau, and D. Rossin, Combinatorial specification of permutation classes, in Proceedings of FPSAC 2012 (24th International Conference on Formal Power Series and Algebraic Combinatorics), vol. AR, 2012, pp. 781 – 792. [CI31] O. Beaumont, N. Bonichon, L. Courtès, X. Hanin, and E. Dolstra, Mixed data-parallel scheduling for distributed continuous integration, in Heterogeneity in Computing Workshop, in IPDPS 2012, IEEE, ed., 2012. [CI32] O. Beaumont, N. Bonichon, P. Duchon, and H. Larchevêque, Use of internet embedding tools for heterogeneous resources aggregation, in Heterogeneity in Computing Workshop (HCW) - in IPDPS 2011, IEEE, ed., 2011, pp. 114–124. [CI33] O. Beaumont, N. Bonichon, P. Duchon, and H. Larchevêque, Utilisation d’outils de plongement d’internet pour l’agrégation de ressources hétérogènes, in Conférence : 13es Rencontres Francophones sur les Aspects Algorithmiques de Télécommunications (AlgoTel), P. Ducourthial, Bertrand et Felber, ed., 2011. [CI34] O. Beaumont, N. Bonichon, L. Eyraud-Dubois, and L. Marchal, Minimizing weighted mean completion time for malleable tasks scheduling, in IPDPS 2012, 26th IEEE International Parallel & Distributed Processing Symposium, IEEE, ed., 2012. [CI35] O. Beaumont, N. Bonichon, L. Eyraud-Dubois, and P. Uznanski, Broadcasting on large scale heterogeneous platforms with connectivity artifacts under the bounded multi-port model, in ICPADS 2011 - 17th Internation Conference on Parallel and Distributed Systems, IEEE, ed., vol. Proceeding of ICPADS 2011, 2011, pp. 173–180. [CI36] O. Beaumont, N. Bonichon, and H. Larchevêque, Modeling and practical evaluation of a service location problem in large scale networks, in Internation Conference on Parallel Computing 2011, 2011, p. 10. [CI37] O. Beaumont, P. Duchon, and P. Renaud-Goud, Approximation algorithms for energy minimization in cloud service allocation under reliability constraints, in HIgh Performance Computing, 2013, p. 20. 198 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI38] O. Beaumont, L. Eyraud-Dubois, and S. Kumar, Broadcasting on large scale heterogeneous platforms under the bounded multi-port model, in 24th IEEE International Parallel and Distributed Processing Symposium (IPDPS 2010), 2010. [CI39] O. Beaumont, L. Eyraud-Dubois, and H. Larchevêque, Reliable service allocation in clouds, in IPDPS - 27th IEEE International Parallel & Distributed Processing Symposium, 2013. [CI40] O. Beaumont, L. Eyraud-Dubois, P. Pesneau, and P. Renaud-Goud, Reliable service allocation in clouds with memory and capacity constraints, in Resilience 2013, in conjunction with EuroPar 2013, 2013. [CI41] O. Beaumont, L. Eyraud-Dubois, H. Rejeb, and C. Thraves, Allocation of clients to multiple servers on large scale heterogeneous platforms, in The Fifteenth International Conference on Parallel and Distributed Systems (ICPADS’09), 2009. [CI42] O. Beaumont, L. Eyraud-Dubois, H. Rejeb, and C. Thraves, Online allocation of splitable clients to multiple servers on large scale heterogeneous platforms, in AlgoTel, A. Chaintreau and C. Magnien, eds., 2009. [CI43] O. Beaumont, L. Eyraud-Dubois, H. Rejeb, and C. Thraves, On-line allocation of clients to multiple servers on large scale heterogeneous systems, in PDP 2010 - The 18th Euromicro International Conference on Parallel, Distributed and Network-Based Computing, 2010. [CI44] O. Beaumont, L. Eyraud-Dubois, and Y. Won, Using the last-mile model as a distributed scheme for available bandwidth prediction, in EuroPar 2011, Springer, ed., 2011. [CI45] O. Beaumont, H. Larchevêque, and L. Marchal, Non linear divisible loads: There is no free lunch, in IPDPS 2013, 27th IEEE International Parallel & Distributed Processing Symposium, 2013. [CI46] O. Beaumont and H. Rejeb, On the importance of bandwidth control mechanisms for scheduling on large scale heterogeneous platforms, in 24th IEEE International Parallel and Distributed Processing Symposium (IPDPS 2010), 2010. [CI47] O. Beaumont and A. Rosenberg, Link-heterogeneity vs. node-heterogeneity in clusters, in HIPC – International Conference on High Performance Computing, 2010, 2010. [CI48] F. Becker, A. Kosowski, N. Nisse, I. Rapaport, and K. Suchan, Allowing each node to communicate only once in a distributed system: Shared whiteboard models, in ACM, 2012, p. 7. [CI49] W. Ben Jaballah, M. Mosbah, H. Youssef, and A. Zemmari, Lightweight source authentication mechanisms for group communications in wireless sensor networks, in IEEE 27th International Conference on Advanced Information Networking and Applications (AINA), IEEE, 2013, pp. 598–605. [CI50] A. Benoit, H. Larchevêque, and P. Renaud-Goud, Optimal algorithms and approximation algorithms for replica placement with distance constraints in tree networks, in Proceedings of IPDPS 2012, IEEE, 2012. [CI51] L. Blin, A. Milani, M. Potop-Butucaru, and S. Tixeuil, Exclusive perpetual ring exploration without chirality, in DISC 2010 - 24th International Symposium Distributed Computing, N. A. Lynch and A. A. Shvartsman, eds., vol. 6343 of Lecture Notes in Computer Science, Springer, 2010, pp. 312– 327. [CI52] N. Bonichon, C. Gavoille, N. Hanusse, and D. Ilcinkas, Connections between theta-graphs, delaunay triangulations, and orthogonal surfaces, in Proceedings of the 36th International Workshop on Graph Theoretic Concepts in Computer Science, vol. 6410 of Lecture Notes in Computer Science, Springer Berlin / Heidelberg, 2010, pp. 266–278. [CI53] N. Bonichon, C. Gavoille, N. Hanusse, D. Ilcinkas, and L. Perkovic, Comment résumer le plan, in 12èmes Rencontres Francophones sur les Aspects Algorithmiques de Télécommunications (AlgoTel), M. G. P.-B. et Hervé Rivano, ed., 2010. F.1. COMBINATORICS AND ALGORITHMS 199 [CI54] N. Bonichon, C. Gavoille, N. Hanusse, and L. Perkovic, Plane spanners of maximum degree six, in Automata, Languages and Programming 37th International Colloquium, ICALP 2010, Bordeaux, France, July 6-10, 2010, Proceedings, Part I, vol. 6198, 2010, pp. 19–30. [CI55] N. Bonichon, C. Gavoille, N. Hanusse, and L. Perkovic, The stretch factor of L1 - and L∞ Delaunay triangulations, in 20th Annual European Symposium on Algorithms (ESA), vol. 7501 of Lecture Notes in Computer Science, 2012, pp. 205–216. [CI56] N. Bonichon, I. Kanj, L. Perkovic, and G. Xia, There are plane spanners of maximum degree 4 (extended abstract), in proceedings of SoCG 2014, 2014. [CI57] D. Bonnin and C. Travers, α-register, in OPODIS, R. Baldoni, N. Nisse, and M. van Steen, eds., vol. 8304 of Lecture Notes in Computer Science, Springer, 2013, pp. 53–67. [CI58] M. Bousquet-Mélou, G. Chapuy, and L.-F. Préville-Ratelle, The representation of the symmetric group on m-Tamari intervals (conference version), in FPSAC 2012, 2012, pp. 351–353. [CI59] M. Bousquet-Mélou, A. Claesson, and M. Dukes, Unlabeled (2+2)-free posets, ascent sequences and pattern avoiding permutations (conference version), in Formal Power Series and Algebraic Combinatorics, 2009. [CI60] M. Bousquet-Mélou and J. Courtiel, Spanning forests in regular planar maps (conference version), in FPSAC 2013, 2013. [CI61] M. Bousquet-Mélou and K. Weller, Asymptotic properties of some minor-closed classes of graphs (conference version), in FPSAC 2013, 2013. [CI62] A. Boussicault and V. Féray, Application of graph combinatorics to rational identities of type A (extended abstract), in DMTCS Proceedings, 21th Annual International Conference on Formal Power Series and Algebraic Combinatorics, 2009, pp. 231–242. [CI63] M. Bouvel and O. Guibert, Refined enumeration of permutations sorted with two stacks and a D8 -symmetry, in Proceedings of FPSAC 2012 (24th International Conference on Formal Power Series and Algebraic Combinatorics), vol. AR, 2012, pp. 757–768. [CI64] M. Bouvel, M. Mishna, and C. Nicaud, Some simple varieties of trees arising in permutation analysis (extended abstract), in Discrete Mathematics & Theoretical Computer Science (DMTCS), vol. AS, 2013, pp. 825–836. [CI65] O. Bodini, A. Jacquot, P. 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Roy, eds., vol. 7109 of Lecture Notes in Computer Science, Springer, 2011, pp. 143–158. [CI128] C. Gavoille and P. Halftermeyer, Connectivity labeling scheme for graphs on surface, in Bordeaux Graph Workshop (BGW), 2012, pp. 69–70. [CI129] C. Gavoille and P. Halftermeyer, Connexité dans l’urgence, in 14èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications (AlgoTel), N. Mathieu, Fabien et Hanusse, ed., 2012, pp. 1–4. [CI130] C. Gavoille, A. Kosowski, and M. Markiewicz, What can be observed locally? round-based models for quantum distributed computing, in 23rd International Symposium on Distributed Computing (DISC), vol. 5805 of Lecture Notes in Computer Science, Springer, 2009, pp. 243–257. [CI131] T. Girod and F. Alexandre, Effects of a modulatory feedback upon the bcm learning rule, in Computational Neuroscience, 2009. 204 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI132] C. Glacet, N. Hanusse, and D. Ilcinkas, The impact of edge deletions on the number of errors in networks, in Proceedings of the 15th International Conference On Principles Of Distributed Systems, vol. 7109 of Lecture Notes in Computer Science, Springer Berlin / Heidelberg, 2011, pp. 378–391. [CI133] C. Glacet, N. Hanusse, and D. Ilcinkas, Impact de la dynamique sur la fiabilité d’informations de routage, in ALGOTEL - 16èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications, 2014, pp. 1–4. [CI134] C. Glacet and V. Lucas, Vers un routage compact distribué, in Vers un routage compact distribué, 2012, p. 1. [CI135] A. Haddar, A. Hadj Kacem, Y. Métivier, M. Mosbah, and M. Jmaiel, A distributed computational model for mobile agents, in PRIMA 2007, vol. 5044 of Lecture Notes in Artificial Intelligence, Springer, 2009, pp. 417–421. [CI136] N. Hanusse, D. Ilcinkas, A. Kosowski, and N. Nisse, Comment battre la marche aléatoire en comptant ?, in 12èmes Rencontres Francophones sur les Aspects Algorithmiques de Télécommunications (AlgoTel), M. G. P.-B. et Hervé Rivano, ed., 2010. [CI137] N. Hanusse, D. Ilcinkas, A. Kosowski, and N. Nisse, Locating a target with an agent guided by unreliable local advice, in Proceedings of the 29th Annual ACM SIGACT-SIGOPS Symposium on Principles of Distributed Computing, ACM New York, NY, USA, 2010, pp. 355–364. [CI138] N. Hanusse and S. Maabout, Un algorithme parallèle pour l’extraction des bordures, in BDA’10, 2010, p. 11 pages. [CI139] N. Hanusse and S. Maabout, A parallel algorithm for computing borders, in Proceedings of the 20th Int. Conf. On Information and Knowledge Management, ACM, 2011, pp. 1639–1648. [CI140] N. Hanusse, S. Maabout, and R. Tofan, Algorithme distribué pour l’extraction des fréquents maximaux, in Algotel, A. Chaintreau and C. Magnien, eds., 2009. [CI141] N. Hanusse, S. Maabout, and R. Tofan, Matérialisation partielle des cubes de données, in Actes des 25èmes journées "Bases de Données Avancées" BDA’09, 2009, pp. 1–20. [CI142] N. Hanusse, S. Maabout, and R. Tofan, A view selection algorithm with performance guarantee, in International Conference on Extending Database Technology, 2009. [CI143] N. Hanusse, S. Maabout, and R. Tofan, Revisiting the partial data cube materialization, in Proceedings of the 15th conference on Advances in Data Bases and Information Systems, no. 6909 in LNCS, Springer, 2011, pp. 70–83. [CI144] H. Hocquard and M. Montassier, Acyclic choosability of planar graphs : a steinberg like approach, in Electronic Notes in Discrete Mathematics, vol. 34, 2009, pp. 199–205. [CI145] H. Hocquard, P. Ochem, and P. Valicov, Bounds and complexity results for strong edge colouring of subcubic graphs, in Electronic Notes in Discrete Mathematics, 2011. [CI146] D. Ilcinkas and A. Wade, On the power of waiting when exploring public transportation systems, in Proceedings of the 15th International Conference On Principles Of Distributed Systems, vol. 7109 of Lecture Notes in Computer Science, Springer Berlin / Heidelberg, 2011, pp. 451–464. [CI147] D. Ilcinkas and A. Wade, Puissance de l’attente aux stations pour l’exploration des réseaux de transport public, in AlgoTel, N. Mathieu, Fabien et Hanusse, ed., 2012, pp. 107–110. [CI148] D. Ilcinkas and A. Wade, Exploration des graphes dynamiques t-intervalle-connexes : le cas de l’anneau, in 15èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications (AlgoTel), N. Nisse, F. Rousseau, and Y. Busnel, eds., 2013, pp. 73–76. F.1. COMBINATORICS AND ALGORITHMS 205 [CI149] D. Ilcinkas and A. Wade, Exploration of the t-interval-connected dynamic graphs: the case of the ring, in Proceedings of the 20th International Colloquium on Structural Information and Communication Complexity, LNCS, 2013. [CI150] C. Johnen, Brief announcement : Memory efficient self-stabilizing k-independent dominating set construction, in Stabilization, Safety, and Security of Distributed Systems, T. Higashino, Y. Katayama, T. Masuzawa, M. Potop-Butucaru, and M. Yamashita, eds., vol. 8255 of LNCS, Springer, 2013, pp. 341– 343. [CI151] C. Johnen and L. Higham, Fault-tolerant implementations of regular registers by safe registers, in Distributed computing and networking with Applications to Networks, K. K. Vijay Garg, Roger Wattenhofer, ed., vol. 5408 of LNCS, Springer, 2009, pp. 337–348. [CI152] C. Johnen and F. Mekhaldi, Brief announcement: Robust self-stabilizing construction of bounded size weight-based clusters, in Stabilization, Safety, and Security of Distributed Systems, 11th International Symposium, SSS 2009„ F. P. Rachid Guerraoui, ed., vol. 5873 of LNCS, Springer, 2009, pp. 787–788. [CI153] C. Johnen and F. Mekhaldi, Robust self-stabilizing construction of bounded size weight-based clusters, in Euro-Par 2010 - Parallel Processing, 16th International Euro-Par Conference„ D. T. Pasqua D’Ambra, Mario Rosario Guarracino, ed., vol. 6271 of LNCS, Springer, 2010, pp. 535–546. [CI154] C. Johnen and F. Mekhaldi, Self-stabilization versus robust self-stabilization for clustering in ad-hoc network, in 17th International Conference Parallel Processing, J. R. Emmanuel Jeannot, Raymond Namyst, ed., vol. 6852 of LNCS, Springer, 2011, pp. 117–129. [CI155] C. Johnen and F. Mekhaldi, Self-stabilizing computation and preservation of knowledge of neighbor clusters, in Fifth IEEE International Conference on Self-Adaptive and Self-Organizing Systems, IEEE computer Society, 2011, pp. 41–50. [CI156] C. Johnen and F. Mekhaldi, From self- to self-stabilizing with service guarantee 1-hop weightbased clustering, in 4th International Symposium Stabilization, Safety, and Security of Distributed Systems (SSS 2012), vol. 7596 of LNCS, Springer, 2012, pp. 163–178. [CI157] C. Joncour, A. Pêcher, and P. Valicov, Mpq-trees for orthogonal packing problem, in Electronic Notes in Discrete Mathematics, vol. 36, 2010, pp. 423–429. [CI158] F. Kaisser, C. Johnen, and V. Vèque, Vers une modélisation robuste des protocoles de routage pour réseaux de véhicules, in CFIP’2009, 2009. [CI159] F. Kaisser, C. Johnen, and V. Vèque, Quantitative model for evaluate routing protocols in a vehicular ad hoc networks on highway, in Proceedings of the Second IEEE Vehicular Networking Conference, 2010, pp. 330–337. [CI160] M. Kardas, M. Klonowski, and D. Pajak, Energy-efficient leader election protocols for singlehop radio networks, in ICPP - 42nd International Conference on Parallel Processing, IEEE, 2013, pp. 399–408. [CI161] M. Kardas, M. Klonowski, D. Pajak, and K. Wolny, k-selection protocols from energetic complexity perspective, in APCDM - 16th Workshop on Advances in Parallel and Distributed Computational Models in IPDPS, IEEE, 2013, pp. 726–733. [CI162] R. Klasing, Efficient exploration of anonymous undirected graphs, in Proceedings of the 24th International Workshop on Combinatorial Algorithms (IWOCA 2013), vol. 8288 of Lecture Notes in Computer Science, Springer, 2013, pp. 7–13. [CI163] R. Klasing, A. Kosowski, D. Pajak, and T. Sauerwald, The multi-agent rotor-router on the ring: A deterministic alternative to parallel random walks, in PODC 2013 - ACM Symposium on Principles of Distributed Computing, ACM, 2013, pp. 365–374. 206 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI164] M. Klonowski and D. Pajak, On λ-alert problem, in IPDPS - 26th IEEE International Parallel and Distributed Processing Symposium, IEEE, 2012, pp. 1057–1067. [CI165] A. 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Alexandre, Saccades generation : from the visual input to the superior colliculus, in International Conference on Neural Computation ICNC 2010, 2010. [CI193] W. Taouali, N. P. Rougier, and F. Alexandre, A basic model of saccades encoding, in The NeuroComp/KEOpS’12 workshop, 2012. Conferences with published proceedings (national) [CN1] F. Alexandre and N. Shah, Apprentissage par renforcement et réduction de la dimensionnalité : une approche bio-inspirée, in Conférence francophone d’Apprentissage - CAP 2011, 2011. [CN2] D. Bonnin and C. Travers, α-registres, in ALGOTEL 2014 – 16èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications, 2014, pp. 1–4. [CN3] M. Carrere and F. Alexandre, Émergence de catégories par interaction entre systèmes d’apprentissage, in Conférence Francophone sur l’Apprentissage Automatique (CAP), P. Preux and M. Tommasi, eds., 2013. [CN4] L. Eyraud-Dubois, A. Lèbre, P. Martineau, A. Soukhal, V. T’Kindt, and D. Trystram, A server consolidation problem: Definition and model, in Proceedings of the 14th conference ROADEF, 2013. 208 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CN5] L. Eyraud-Dubois and P. Uznanski, Bedibe: Datasets and software tools for distributed bandwidth prediction, in AlgoTel’2012 - Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications, N. Hanusse and F. Mathieu, eds., 2012. [CN6] E. Garnaud, N. Hanusse, S. Maabout, and N. Novelli, Calcul parallèle de dépendances, in Actes de la conférence BDA (Bases de Données Avancées), 2013, pp. 1–20. [CN7] C. Gavoille and Y. Dieng, Routage dans les réseaux cellulaires, in 10ièmes Journées Doctorales en Informatique et Réseaux, 2009, pp. 7–12. [CN8] N. Hanusse, S. Maabout, and R. Tofan, Algorithmes pour la sélection de vues à matérialiser avec garantie de performance, in Actes de la conférence EDA 2009, 2009, pp. 1–15. [CN9] V. Vèque and C. Johnen, Hiérarchisation dans les réseaux ad hoc de véhicules, in Ubimob’12, R.-C. N. . a. Roose Ph., ed., Données - informatique - I.A. - IHM, CEPADUES, 2012, pp. 45–52. Conferences without published proceedings (international) [SI1] J.-C. Aval, A. Boussicault, and S. Dasse-Hartaut, The tree structure in staircase tableaux, in GASCOM 2012, 2012. [SI2] O. Baudon, J. Bensmail, J. Przybylo, E. Sopena, and M. Wozniak, On the size of graphs that can be partitioned under a given number of prescriptions, in 4th Polish Combinatorial Conference (4PCC), 2012. [SI3] O. Baudon, F. Gilbert, and M. Wozniak, Recursively arbitrarily vertex-decomposable graphs, in 8th French Combinatorial Conference, 2010. [SI4] T. Beati, M. Carrere, and F. Alexandre, Which reinforcing signals in autonomous systems?, in Third International Symposium on Biology of Decision Making, 2013. [SI5] O. Beaumont, L. Eyraud-Dubois, H. Rejeb, and C. Thraves, Online and offline independent tasks allocation schemes on large scale master-worker heterogeneous platforms., in 1st Workshop on New Challenges in Distributed Systems, 2009. [SI6] C. Carvajal, T. Viéville, and F. Alexandre, To flee or not to flee? neural field dynamics shape information flows in a model of the thalamocortical visual system, in BC - Bernstein Conference - 2013, 2013. [SI7] L. Campagnola, A. Klein, C. Rossant, and N. Rougier, Vispy, a modern and interactive scientific visualisation, in Euroscipy 2013, 2013. [SI8] F. Kaisser, C. Johnen, and V. Vèque, Étude de la formation de convois dans un réseau de véhicules sur autoroute, in CFIP 2011 - Colloque Francophone sur l Ingénierie des Protocoles, 2011. [SI9] E. Sopena, Upper oriented chromatic number of undirected graphs and oriented colorings of product graphs, in 8th French Combinatorial Conference 8FCC, 2010. [SI10] E. Sopena, Cgt inspired tools for studying the game chromatic number of trees, in DIMAP Workshop on Combinatorics and Graph Theory 2011, 2011. [SI11] W. Taouali, T. Viéville, N. P. Rougier, and F. Alexandre, On asynchronous dynamic neural field computation, in Cinquième conférence plénière française de Neurosciences Computationnelles, "Neurocomp’10", 2010. [SI12] E. Teftef, C. Carvajal, T. Viéville, and F. Alexandre, When early vision in the retina attempts to take decisions about visual motion events : the role of konio cells, in Third International Symposium on Biology of Decision Making, 2013. BIBLIOGRAPHY 209 [SI13] A. Zvonkine, On a family of uniform dessins, cousins of Bring’s icosahedron, in Riemann surfaces and dessins d’enfants, 2010. [SI14] A. Zvonkine, Around the icosahedron, in Conférence à l’honneur du 75ème anniversaire de Alexei Sossinsky, 2012. [SI15] A. Zvonkine, Weighted trees, in Groups and Riemann surfaces, 2012. Conferences without published proceedings (national) [SN1] J. Andrieu, F. Alexandre, A. Genin, and J. San-Emeterio, Ressource fourragère en afrique soudano-sahélienne : estimation, cartographie, et suivi par analyse de séries temporelles de ndvi noaa, in LES SATELLITES GRAND CHAMP pour le suivi de l’environnement, des ressources naturelles et des risques, Clermont-Ferrand : France (2010), 2010. [SN2] N. Bonichon, M. Bousquet-Mélou, and E. Fusy, Permutations de Baxter et orientations bipolaires, in Premières Journées de Combinatoire de Bordeaux, 2009. [SN3] M. Bousquet-Mélou, Comptage de cartes planaires coloriées, in Première journée du projet ANR A3, 2009. [SN4] M. Bousquet-Mélou, Sada : Structures aléatoires discrètes et algorithmes, in Colloque de bilan du premier programme Blanc de l’ANR, 2009. [SN5] C. Carvajal, T. Viéville, and F. Alexandre, Konio pathway: An instinctive visual mechanism for survival and decision making?, in NeuroComp/KEOpS’12 workshop beyond the retina: from computational models to outcomes in bioengineering. Focus on architecture and dynamics sustaining information flows in the visuomotor system., 2012. [SN6] E. Diot and C. Gavoille, La hiérarchie des graphes k-chemin séparables, in 12e Journées Graphes et Algorithmes, 2010. [SN7] C. Gavoille, Q. Godfroy, and L. Viennot, Spanners additifs de taille sous-quadratique pour les graphes orientés, in 12e Journées Graphes et Algorithmes, CIRM, ed., 2010, p. 9. [SN8] O. Guibert and M. Bouvel, Quelques cas d’énumération de permutations triées par pile et en combinant des symétries, in Journées de Combinatoire de Bordeaux, 2013. [SN9] A. Zvonkine, Dessiner les fonctions rationnelles (et méromorphes), in Journées Combinatoires de Bordeaux ’09, 2009. [SN10] A. Zvonkine, Deux remarques combinatoires à l’exposé de Yuri Bilu, in Journées Math-Info, 2010. [SN11] A. Zvonkine, Existence et unicité d’objets combinatoires, in Journées Arbres, 2010. Other publications (international) [AI1] I. Abraham, C. Gavoille, A. Gupta, O. Neiman, and T. Kunal, Cops, robbers, and threatening skeletons: Padded decomposition for minor-free graphs, tech. rep., 2013. [AI2] Y. Afek, E. Gafni, S. Rajsbaum, M. Raynal, and C. Travers, The k-simultaneous consensus problem, tech. rep., 2009. [AI3] F. Alexandre, J. Fix, N. P. Rougier, and T. Viéville, Algorithmic adjustment of neural field parameters, tech. rep., 2009. [AI4] M. Albert and M. Bousquet-Mélou, Permutations sortable by two stacks in parallel and quarter plane walks, tech. rep., 2013. [AI5] D. Alistarh, H. Attiya, R. Guerraoui, and C. Travers, Early deciding synchronous renaming in o(log f ) rounds or less, tech. rep., 2012. 210 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [AI6] J.-C. Aval, A. Boussicault, and S. Dasse-Hartaut, The tree structure in staircase tableaux. 2012. [AI7] J.-C. Aval, M. D’Adderio, M. Dukes, and Y. Le Borgne, Two operators on sandpile configurations, the sandpile model on the complete bipartite graph, and a cyclic lemma. 2013. [AI8] O. Baudon and J. Bensmail, Partitioning the cartesian product of an arbitrarily partitionable graph and a complete graph, tech. rep., 2012. [AI9] O. Baudon, J. Bensmail, F. Foucaud, and M. Pilsniak, Structural properties of recursively partitionable graphs with connectivity 2. 2012. [AI10] O. Baudon, J. Bensmail, and E. Sopena, The irregular chromatic index of trees, tech. rep., 2013. [AI11] O. Baudon, J. Bensmail, and E. Sopena, On the complexity of determining the irregular chromatic index of a graph, tech. rep., 2013. [AI12] O. Baudon, J. Bensmail, and E. Sopena, Partitioning harary graphs into connected subgraphs containing prescribed vertices. 2013. [AI13] O. Baudon, F. Foucaud, and M. Pilsniak, A note on online and recursively arbitrarily vertexpartitionable balloons, tech. rep., 2012. [AI14] O. Baudon, F. Foucaud, J. Przybylo, and M. Wozniak, On the structure of arbitrarily partitionable graphs with given connectivity. 2012. [AI15] O. Baudon, F. Gilbert, and M. Wozniak, Recursively arbitrarily vertex decomposable suns. 2010. [AI16] O. Baudon, F. Gilbert, and M. Wozniak, Recursively arbitrarily vertex-decomposable graphs. 2012. [AI17] C. Bachoc, A. Pêcher, and A. Thiery, On the theta number of powers of cycle graphs. 2011. [AI18] O. Beaumont, L. Bobelin, H. Casanova, P.-N. Clauss, B. Donassolo, L. Eyraud-Dubois, S. Genaud, S. Hunold, A. Legrand, M. Quinson, C. Rosa, L. Schnorr, M. Stillwell, F. Suter, C. Thiery, P. Velho, J.-M. Vincent, and Y. Won, Towards scalable, accurate, and usable simulations of distributed applications and systems, tech. rep., 2011. [AI19] O. Beaumont, M. Dojwa, P. Duchon, R. Elsässer, R. Klasing, and M. Korzeniowski, Fast generation and mixing of random graphs in peer-to-peer networks. 2011. [AI20] O. Beaumont, L. Eyraud-Dubois, H. Rejeb, and C. Thraves, Extended version: Online allocation of splitable clients to multiple servers on large scale heterogeneous platforms, tech. rep., 2009. [AI21] O. Beaumont, L. Eyraud-Dubois, H. Rejeb, and C. Thraves, Heterogeneous resource allocation under degree constraints. 2011. [AI22] O. Beaumont, L. Eyraud-Dubois, and P. Renaud-Goud, Efficient and robust allocation algorithms in clouds under memory constraints. 2013. [AI23] O. Beaumont, H. Larchevêque, and L. Marchal, Non-linear divisible loads: There is no free lunch, tech. rep., 2012. [AI24] O. Beaumont and L. Marchal, What makes affinity-based schedulers so efficient ? 2013. [AI25] J. Bensmail, Complexity of determining the irregular chromatic index of a graph, tech. rep., 2013. [AI26] J. Bensmail, On the path cover number of k-assignable arbitrarily partitionable graphs. 2013. [AI27] J. Bensmail, On three polynomial kernels of sequences for arbitrarily partitionable graphs. 2013. F.1. COMBINATORICS AND ALGORITHMS 211 [AI28] J. Bensmail, The vertex-colouring a,b-edge-weighting problem is np-complete for every pair of weights, tech. rep., 2013. [AI29] J. Bensmail, R. Duvignau, and S. Kirgizov, The complexity of deciding whether a graph admits an orientation with fixed weak diameter, tech. rep., 2013. [AI30] J. Bensmail, A. Harutyunyan, H. Hocquard, and P. Valicov, Strong edge-colouring of sparse planar graphs. 2014. [AI31] J. Bensmail and G. Renault, Decomposing oriented graphs into 6 locally irregular oriented graphs. 2013. [AI32] A. Benoit, H. Larchevêque, and P. Renaud-Goud, Optimal algorithms and approximation algorithms for replica placement with distance constraints in tree networks, tech. rep., 2011. [AI33] P. Berenbrink, R. Klasing, A. Kosowski, F. Mallmann-Trenn, and P. Uznanski, Be fair and be selfish! characterizing deterministic diffusive load-balancing schemes with small discrepancy. 2014. [AI34] P. Berthomé, T. Bouvier, F. Mazoit, N. Nisse, and R. Pardo Soares, An unified fpt algorithm for width of partition functions, tech. rep., 2013. [AI35] L. Blin, A. Milani, M. Potop-Butucaru, and S. Tixeuil, Exclusive perpetual ring exploration without chirality, tech. rep., 2010. [AI36] N. Bonichon, C. Gavoille, N. Hanusse, and D. Ilcinkas, Connections between theta-graphs, delaunay triangulations, and orthogonal surfaces. 2010. [AI37] N. Bonichon, C. Gavoille, N. Hanusse, and L. Perkovic, The stretch factor of l1 - and l∞ delaunay triangulations, tech. rep., 2012. [AI38] N. Bonichon, C. Gavoille, N. Hanusse, and L. Perkovic, The stretch factor of L1 - and L∞ -Delaunay triangulations. Poster at STOC, 2012. [AI39] N. Bonichon, I. Kanj, L. Perković, and G. Xia, There are plane spanners of maximum degree 4. 2014. [AI40] D. Bonnin and C. Travers, α-register. 2013. [AI41] M. Bousquet-Mélou, G. Chapuy, and L.-F. Préville Ratelle, Tamari lattices and parking functions: proof of a conjecture of F. Bergeron, tech. rep., 2011. [AI42] M. Bousquet-Mélou and J. Courtiel, Spanning forests in regular planar maps, tech. rep., 2013. [AI43] F. Bonnet, A. Milani, M. Potop-Butucaru, and S. Tixeuil, Asynchronous exclusive perpetual grid exploration without sense of direction, tech. rep., 2011. [AI44] O. Borodin, A. Ivanova, M. Montassier, and A. Raspaud, (k, 1)-coloring of sparse graphs. Rapport de Recherche RR-1465-09 LaBRI, 2009. [AI45] L. Bougrain, C. Saavedra, B. Payan, A. Hutt, M. Rio, and F. Alexandre, Inria’s projectteam cortex : Computational neuroscience. 2010. [AI46] Z. Bouzid, P. Sutra, and C. Travers, Anonymous agreement: The janus algorithm. 2011. [AI47] Z. Bouzid and C. Travers, (anti−Ωx × Σz )-based k-set agreement algorithms, tech. rep., 2010. [AI48] Z. Bouzid and C. Travers, Anonymity, failures, detectors and consensus. 2012. [AI49] Z. Bouzid and C. Travers, Simultaneous consensus is harder than set agreement in message passing. 2012. 212 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [AI50] B. Brešar, P. Dorbec, S. Klavzar, and G. Kosmrlj, Domination game: effect of edge- and vertex-removal. arXiv:1307.5378v1 [math.CO], 2013. [AI51] C. Carvajal, T. Viéville, and F. Alexandre, Impact of the konio pathway in the thalamocortical visual system: a modeling study. 2013. [AI52] C. Carvajal, T. Viéville, and F. Alexandre, A modeling study of the dynamic interplay between pathways in the thalamocortical visual system: The magno and koniocellular streams case. Poster of past and ongoing thesis/research work for the autumn conference of my graduate school (APIL: Annual PhD students conference IAEM Lorraine), 2013. [AI53] J. Chalopin, Y. Métivier, and T. Morsellino, Enumeration and leader election in partially anonymous and multi-hop broadcast networks. 2010. [AI54] G. Chang, F. Havet, M. Montassier, and A. Raspaud, Steinberg’s conjecture and nearcolorings, tech. rep., 2011. [AI55] M. Chen, M. Montassier, and A. Raspaud, Some structural properties of planar graphs and their applications to 3-choosability. Rapport de Recherche RR-1455-09 LaBRI, 2009. [AI56] R. Cori and G. Hetyei, Counting genus one partitions and permutations. 2013. [AI57] R. Cori and Y. Le Borgne, The Riemann-Roch theorem for graphs and the rank in complete graphs. 2013. [AI58] B. Courcelle, C. Gavoille, M. M. Kanté, and A. Twigg, Optimal labelling for connectivity checking in planar networks with obstacles. 2009. [AI59] J. Czyzowicz, D. Ilcinkas, A. Labourel, and A. Pelc, Asynchronous deterministic rendezvous in bounded terrains. Rapport de recherche du LaBRI : RR-1467-09, 2009. [AI60] J. Czyzowicz, D. Ilcinkas, A. Labourel, and A. Pelc, Optimal exploration of terrains with obstacles. Rapport de recherche du LaBRI : RR-1468-09, 2009. [AI61] J. Czyzowicz, E. Kranakis, D. Pajak, and N. Taleb, Patrolling by robots equipped with visibility. 2014. [AI62] J. Czyzowicz, A. Labourel, and A. Pelc, How to meet asynchronously (almost) everywhere. 2009. [AI63] S. Das, D. Dereniowski, A. Kosowski, and P. Uznanski, Rendezvous of distance-aware mobile agents in unknown graphs. 2014. [AI64] D. Dereniowski, R. Klasing, A. Kosowski, and L. Kuszner, Rendezvous of heterogeneous mobile agents in edge-weighted networks. 2014. [AI65] D. Dereniowski, A. Kosowski, and D. Pajak, Distinguishing views in symmetric networks: A tight lower bound. 2013. [AI66] G. Detorakis and N. Rougier, A computational view of area 3b of primary somatosensory cortex. 2013. [AI67] O. Devillers, P. Duchon, and R. Thomasse, A generator of random convex polygons in a disc, tech. rep., 2014. [AI68] O. Devillers, P. Duchon, and R. Thomasse, A generator of random convex polygons in a disc. 2014. [AI69] E. Diot and C. Gavoille, Path separability of graphs. 2010. [AI70] M. Dolega and V. Féray, On Kerov polynomials for Jack characters. 2012. F.1. COMBINATORICS AND ALGORITHMS 213 [AI71] F. Ellen, P. Fatourou, E. Kosmas, A. Milani, and C. Travers, Universal constructions that ensure disjoint-access parallelism and wait-freedom, tech. rep., 2012. [AI72] L. Eyraud-Dubois and P. Uznanski, Point-to-point and congestion bandwidth estimation: experimental evaluation on planetlab. 2013. [AI73] B. Florent, A. Kosowski, N. Nisse, I. Rapaport, and K. Suchan, Interconnection network with a shared whiteboard: Impact of (a)synchronicity on computing power, tech. rep., 2011. [AI74] P. Fraigniaud, S. Rajsbaum, and C. Travers, Locality and checkability in wait-free computing, tech. rep., 2011. [AI75] P. Fraigniaud, S. Rajsbaum, and C. Travers, On the number of opinions needed for faulttolerant run-time monitoring in distributed systems. 2014. [AI76] C. Gavoille, Q. Godfroy, and L. Viennot, Node-disjoint multipath spanners and their relationship with fault-tolerant spanners, tech. rep., 2011. [AI77] C. Gavoille, A. Kosowski, and M. Markiewicz, What can be observed locally? round-based models for quantum distributed computing. Rapport de recherche, 2009. [AI78] E. Godard, Y. Métivier, and G. Tel, Termination detection of local computations. Rapport de Recherche RR-1466-09 LaBRI, 2009. [AI79] R. Gorojosky and F. Alexandre, Models of hippocampus for pavlovian learning, tech. rep., 2013. [AI80] N. Hanusse, D. Ilcinkas, A. Kosowski, and N. Nisse, How to beat the random walk when you have a clock?, tech. rep., 2010. [AI81] H. Hocquard and M. Montassier, Acyclic coloring of graphs with maximum degree five. Rapport de recherche RR-1450-08 LaBRI, 2010. [AI82] H. Hocquard, M. Montassier, and A. Raspaud, A note on the acyclic 3-choosability of some planar graphs. Rapport de Recherche RR-1463-09 LaBRI, 2009. [AI83] C. Johnen, Fast self-stabilizing k-independent dominating set construction, tech. rep., 2013. [AI84] C. Johnen, Memory efficient self-stabilizing k-independent dominating set construction, tech. rep., 2013. [AI85] C. Johnen and F. Mekhaldi, From self- to self-stabilizing with service guarantee 1-hop weight-based clustering, tech. rep., 2012. [AI86] A. Kosowski, B. Li, N. Nisse, and K. Suchan, k-chordal graphs: from cops and robber to compact routing via treewidth, tech. rep., 2012. [AI87] A. Kosowski and M. Markiewicz, Lower bounds on the communication complexity of binary local quantum measurement simulation. 2013. [AI88] A. Kosowski and D. Pajak, Does adding more agents make a difference? a case study of cover time for the rotor-router. 2014. [AI89] F. Mazoit, A simple proof of the tree-width duality theorem, tech. rep., 2013. [AI90] F. Mazoit, A single exponential bound for the redundant vertex theorem on surfaces. 2013. [AI91] M. Markiewicz, A. Kosowski, T. Tylec, J. Pykacz, and C. Gavoille, Static quantum games revisited, tech. rep., 2014. [AI92] M. Montassier, A. Pêcher, A. Raspaud, and X. Zhu, Edge-partitions of sparse graphs and their applications to game coloring. Rapport de recherche RR-1453-09 LaBRI, 2009. 214 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [AI93] L.-F. Préville-Ratelle and X. Viennot, An extension of Tamari lattices. 2014. [AI94] E. Teftef, M.-J. Escobar, A. Astudillo, C. Carvajal, B. Cessac, A. Palacios, T. Viéville, and F. Alexandre, Modeling non-standard retinal in/out function using computer vision variational methods, tech. rep., 2013. [AI95] C. Travers, S. Rajsbaum, and M. Raynal, The iterated restricted immediate snapshot model, tech. rep., 2013. [AI96] A. Zvonkine, Math from three to seven: The story of a mathematical circle for preschoolers. Un ouvrage de type pédagogique publié par MSRI et AMS dans la série "MSRI Mathematical Circles Library", 2011. [AI97] A. Zvonkine, Enumeration of weighted plane trees. 2014. Other publications (national) [AN1] F. Alexandre, Comprendre les réseaux cérébraux, tech. rep., 2013. [AN2] F. Alexandre, C. Carvajal, and T. Viéville, Comprendre le système le plus complexe de notre planète ? 2013. [AN3] J. Bensmail, Préaffectation de sommets dans les graphes arbitrairement partitionnables, tech. rep., 2011. [AN4] C. Glacet, C. Gavoille, N. Hanusse, D. Ilcinkas, and F. Majorczyk, Simulations de routage du schéma agmant. Rapport de contrat (final), 2011. [AN5] J.-F. Marckert, Etude probabiliste de structures combinatoires. 2010. [AN6] T. Morsellino and T. F. Bissyandé, Une approche métier au développement d’applications pour milieux pervasifs. Rapport de Recherche RR-1453-11 LaBRI, 2010. [AN7] N. Rougier, C++ crash course. 2012. [AN8] N. Rougier, Matplotlib tutorial. 2012. [AN9] N. Rougier, Outils et bibliothèques de visualisation. 2013. [AN10] A. Rousseau, A. Darnaud, B. Goglin, C. Acharian, C. Leininger, C. Godin, C. Holik, C. Kirchner, D. Rives, E. Darquie, E. Kerrien, F. Neyret, F. Masseglia, F. Dufour, G. Berry, G. Dowek, H. Robak, H. Xypas, I. Illina, I. Gnaedig, J. Jongwane, J. Ehrel, L. Viennot, L. Guion, L. Calderan, L. Kovacic, M. Collin, M.-A. Enard, M.-H. Comte, M. Quinson, M. Olivi, M. Giraud, M. Dorémus, M. Ogouchi, M. Droin, N. Lacaux, N. Rougier, N. Roussel, P. Guitton, P. Peterlongo, R.-M. Cornus, S. Vandermeersch, S. Maheo, S. Lefebvre, S. Boldo, T. Viéville, V. Poirel, A. Chabreuil, A. Fischer, C. Farge, C. Vadel, I. Astic, J.-P. Dumont, L. Féjoz, P. Rambert, P. Paradinas, S. De Quatrebarbes, and S. Laurent, Médiation scientifique : une facette de nos métiers de la recherche, tech. rep., 2013. Free software – AlgoKP, https://realopt.bordeaux.inria.fr/?page_id=161, Joncour, Pêcher, Valicov – MLV Library, http://www-igm.univ-mlv.fr/~boussica/mlv/api/French/html/index.html, A. Boussicault – Sage-Combinat, http://wiki.sagemath.org/combinat/, A. Boussicault, V. Delecroix, ... – visidia, http://visidia.labri.fr, P. Castéran, Y. Métivier, M. Mosbah, A. Zemmari Completed PhDs F.1. COMBINATORICS AND ALGORITHMS 215 – A. Bacher (dir: M. Bousquet-Mélou), Doctorat d’Informatique, Université Bordeaux 1, “Chemins et animaux : applications de la théorie des empilements de pièces”, October 2011 – J. Bensmail (dir: E. Sopena, O. Baudon), Doctorat d’Informatique, Université de Bordeaux, “Partitions and decompositions of graphs”, June 2014 – C. Charpentier (dir: A. Raspaud, M. Montassier), Doctorat d’Informatique, Université de Bordeaux, “Colorations, jeux et marquages dans les graphes”, March 2014 – Y. Dieng (dir: C. Gavoille), LaBRI, U. Bordeaux, “Décomposition arborescente des graphes planaires et routage compact”, December 2009 – E. Diot (dir: C. Gavoille), LaBRI, U. Bordeaux, “Etude structurelle et algorithmique des graphes pouvant être découpés par des plus courts chemins”, December 2011 – A. Fontaine (dir: A. Zemmari, P. Casteran), Doctorat d’Informatique, Université de Bordeaux, “Analyses et preuves formelles d’algorithmes distribués probabilistes”, June 2014 – F. Foucaud (dir: R. Klasing, A. Raspaud), Doctorat d’Informatique, Université Bordeaux 1, “Combinatorial and algorithmic aspects of identifying codes in graphs”, December 2012 – C. Glacet (dir. N. Hanusse, D. Ilcinkas), Doctorat d’informatique, Université Bordeaux 1, “Algorithmes de routage, de la réduction des coûts de communication à la dynamique”, December 2013 – Q. Godfroy (dir: C. Gavoille), LaBRI, U. Bordeaux, “From spanners to multipath spanners”, November 2012 – A. Guignard (dir: E. Sopena), Doctorat d’Informatique, Université Bordeaux 1, “Jeux de coloration de graphes”, December 2011 – M. A. Haddard (dir: Y. Métivier, M. Mosbah), Doctorat d’informatique, Université Bordeaux 1, “Codage d’algorithmes distribués d’agents mobiles à l’aide de calculs locaux”, December 2011 – H. Hocquard (dir: A. Raspaud, M. Montassier), “Colorations de graphes sous contraintes”, December 2011 – H. Larchevêque (dir: O. Beaumont, N. Bonichon, Ph. Duchon), Doctorat d’Informatique, Université Bordeaux 1, “Agrégation de ressources avec contrainte de distance: applications aux plateformes de grande échelle”, September 2010 – F. Le Gac (dir: R. Cori, Ph. Duchon), Doctorat d’Informatique, Université Bordeaux 1, “Quelques problèmes d’énumération autour des matrices à signes alternants”, July 2011 – Th. Morsellino (dir: J. Chalopin, Y. Métivier), Doctorat d’informatique, Université Bordeaux 1, “Présentation et étude de quelques problèmes d’algorithmique distribuée”, September 2012 – D. Pajak (dir: R. Klasing, A. Kosowski), Doctorat d’Informatique, Université de Bordeaux, “Algorithms for deterministic parallel graph exploration”, June 2014 – H. Rejeb (dir: O. Beaumont, L. Eyraud-Dubois), Doctorat d’Informatique, Université Bordeaux 1, “Étude des problèmes d’ordonnancement sur des plates-formes hétérogènes en modèle multi-port”, August 2011 – G. Renault (dir: P. Dorbec, E. Sopena), Doctorat d’Informatique, Université Bordeaux 1, “Combinatorial games on graphs”, November 2013 – S. Sen (dir: E. Sopena, A. Raspaud, A. Pêcher), “A contribution to the theory of graph homorphisms and colorings”, March 2014 – R. Tofan (dir: N. Hanusse, S. Maabout, C. Gavoille), LaBRI, U. Bordeaux, “Bordures: de la sélection de vues dans un cube de données au calcul parallèle de fréquents maximaux”, September 2010 – P. Uznanski (dir: O. Beaumont, N. Bonichon, L. Eyraud-Dubois), Doctorat d’Informatique, Université Bordeaux 1, “Modélisation des communications sur plates-formes à grande echelles”, October 2013 – P. Valicov (dir: A. Pêcher, M. Montassier, E. Sopena), “On packing, colouring and identification problems”, July 2013 – A.M. Wade (dir: D. Ilcinkas, R. Klasing), Doctorat d’Informatique, Université de Bordeaux, “Complexité de l’exploration par agent mobile des graphes dynamiques”, January 2014 including cotutelle PhDs (international) – M. Chen (dir: A. Raspaud, Weifan Wang - Zhejiang Normal University, Jinhua, China), Doctorat d’Informatique, Université Bordeaux 1, “Coloration de graphes”, November 2010 216 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – N. Roussel (dir: A. Raspaud, Xuding Zhu - Sun Yat Sen University, Kaoshiung, Taiwan), Doctorat d’Informatique, Université Bordeaux 1, “Coloration circulaire et acyclique par liste de graphes”, December 2009 including cotutelle PhDs (national) – F. Mekhaldi (dir: C. Johnen, Véronique Vèque), Doctorat d’Informatique, Université Paris-Sud, “Clustering in mobile ad-hoc networks : design and evaluation of robust self-stabilizing protocols”, December 2011 Completed habilitations – J.-C. Aval, HDR, Université Bordeaux 1, Combinatoire autour du groupe symétrique, February 2013 – N. Bonichon, HDR, Université Bordeaux 1, Quelques algorithmes entre le monde des graphes et les nuages de points, April 2013 – P. Dorbec, HDR, Université Bordeaux 1, Graphes, jeux et propagation, July 2013 – N. Hanusse, HDR, Université Bordeaux 1, Navigation dans les grands graphes, November 2009 – R. Klasing, HDR, Université Bordeaux 1, Algorithmic Methods for Large Communication Networks, November 2009 – A. Kosowski, HDR, Université Bordeaux 1, Efficient Algorithms for Mobile Agents in an Anonymous Network, September 2013 – M. Montassier, HDR, Université Bordeaux 1, On some coloring problems of Graphs, November 2010 – N. P. Rougier, HDR, Université Nancy 2, Fondements Biologiques pour le calcul distribué, numérique et adaptatif, May 2011 – A. Zemmari, HDR, Université Bordeaux 1, Présentation et analyse de quelques algorithmes distribués probabilistes, October 2009 F.1.2 Visibility and attractivity Prizes and distinctions Distinctions – M. Bousquet-Mélou, Silver Medal CNRS, 2014 – M. Bousquet-Mélou, de Saulses de Freycinet Prize, French Academy of Sciences, 2009 – V. Féray, Laureate of the Peccot Foundation, Collège de France, 2012 – C. Gavoille, Nomination to the Institut Universitaire de France – IUF Junior Member, 2009 – A. Kosowski has been elected member of the Young Scientist Academy of the Polish Academy of Sciences, 2012-2016 – A. Kosowski, Witold Lipski Prize for Young Researchers in Computer Science, 2009 – A. Zvonkine, Nomination to the Gabriel Lamé chair, Univ. Saint Petersburg, 2014 Top Citation Papers – Top Citation Paper of Theoretical Computer Science in 2010 for the period 2005-2010 (Philippe Duchon, Nicolas Hanusse): Could any graph be turned into a small-world?, Theor. Comput. Sci. 355(1): 96-103 (2006) – Bresar, Dorbec, Goddard et al., Vizing’s conjecture: a survey and recent results, Journal of Graph Theory, 2012 [RI72]. This survey is the best top cited article published in Journal of Graph Theory for years 2012-2013: http://onlinelibrary.wiley.com/journal/10.1002/%28ISSN%291097-0118/homepage/MostCited.html Best Papers – DISC 2011 (Corentin Travers et al.): Locality and Checkability in Wait-Free Computing [CI115] – ICALP 2013, track C (Adrian Kosowski et al.): Fast Collaborative Graph Exploration [CI94] – PODC 2010 (Adrian Kosowski et al.): How to meet when you forget: log-space rendezvous in arbitrary graphs (presented at Best Paper Session) F.1. COMBINATORICS AND ALGORITHMS 217 Editorial and organizational activities Steering committee (international) – M. Bouvel, member of the Steering Committee of the series of Conferences Permutation Patterns, since 2012 – C. Gavoille, member of the Steering Committe of the International ACM Symposium on Principles of Distributed Computing (PODC), 2009-2011 – R. Klasing, member of the Steering Committee of the International Colloquium on Structural Information and Communication Complexity (SIROCCO), since 2011 Journal editorial board (international) – O. Beaumont, Associate Editor, IEEE Transactions on Parallel and Distributed Systems, TPDS (since June 2010) – M. Bousquet-Mélou, Editor for Journal of Combinatorial Theory, Series A (since 2001) – M. Bousquet-Mélou, Editor for Advances in Applied Mathematics (since 2000) – M. Bousquet-Mélou, Associate Editor for the Electronic Journal of Combinatorics (since 2013) – M. Bousquet-Mélou, Editor for the Séminaire Lotharingien de Combinatoire (since 2007) – M. Bousquet-Mélou, Editor for the Annales de l’IHP D : Combinatorics, Physics and their Interactions (since 2013) – M. Bouvel, Guest editor for the special issue of the Journal of Combinatorics dedicated to the conference Permutation Patterns (2013) – R. Klasing, Associate Editor for Algorithmic Operations Research (since 2007) – R. Klasing, Associate Editor for Parallel Processing Letters (since 2007) – R. Klasing, Associate Editor for Networks (since 2007) – R. Klasing, Associate Editor for Computing and Informatics (since 2008) – R. Klasing, Associate Editor for Theoretical Computer Science (since December 2009) – R. Klasing, Associate Editor for Fundamenta Informaticae (since January 2010) – R. Klasing, Associate Editor for Discrete Applied Mathematics (since February 2010) – R. Klasing, Associate Editor for Wireless Networks (since May 2010) – R. Klasing, Associate Editor for Journal of Interconnection Networks (since November 2010) – A. Kosowski, Guest editor for the special issue of Theoretical Computer Science dedicated to the conference SIROCCO 2011 – A. Kosowski, Guest editor for Computing and Informatics (2011) – J.-F. Marckert, Associate Editor for Annals of Applied Probability (since 2013) – Y. Métivier, Editor for RAIRO Theoretical Informatics and Applications (since 2000) – E. Sopena, Editor for Discussionnes Mathematicae Graph Theory (since 2013) – A. Zvonkine, Associate editor, Kyungpook Mathematical Journal (since 2007) Chair of program committee (international) – O. Beaumont, ICPP 13 (vice chair Algorithms Track), Lyon, France, 2013 – O. Beaumont, IPDPS 11 (vice chair Algorithms Track), Anchorage, USA, 2011 – M. Bousquet-Mélou, Formal Power Series and Algebraic Combinatorics (FPSAC) 2011, Reykjavik, Iceland, co-chair – M. Bousquet-Mélou, Analysis of Algorithms (AofA) 2014, Paris, co-chair – Ph. Duchon, GASCom conference, 2012, Bordeaux, chair – C. Gavoille, International Colloquium on Automata, Languages and Programming, ICALP 2010, Bordeaux, co-chair – C. Gavoille, Annual ACM Symposium on Principles of Distributed Computing, PODC 2011, San Jose, USA, general chair 218 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – D. Ilcinkas, DYNAS 2010 (2nd International Workshop on DYnamic Networks: Algorithms and Security) - cochair – C. Johnen, Chairpersonn of “self-stabilizing” track of SSS 2011, 13th Symposium on Stabilization, Safety, and Security of Distributed Systems, Grenoble, France, 2011 – R. Klasing, Bordeaux Workshop on Identifying Codes (BWIC 2011), Bordeaux, France, 2011, chair – R. Klasing, 11th International Symposium on Experimental Algorithms (SEA 2012), Bordeaux, France, chair – R. Klasing: SSS 2013 (Ad-hoc, sensor, robot and opportunistic networks Track), co-chair – A. Kosowski, SIROCCO 2011 (18th International Colloquium on Structural Information and Communication Complexity) - cochair for organization, proceedings co-editor – A. Kosowski, FCT 2015 (20th International Symposium on Fundamentals of Computation Theory) cochair – A. Raspaud, BGW2012 (Bordeaux Graph Workshop 2012), cochair – E. Sopena, BGW2012 (Bordeaux Graph Workshop 2012), cochair Chair of program committee (national) – N. Hanusse, Algotel, 2012, La grande-motte, co-chair Program committee (international) – F. Alexandre, program committee member of the conference for the Simulation of Adaptive Behavior, SAB 2012 – F. Alexandre, program committee member of the Chilean Workshop on Pattern Recognition, CWPR 2012 – F. Alexandre, program committee member of the IEEE conference for the Engineering in Medicine and Biology EMBS 2013 – J.-C. Aval, program committee member of FPSAC 2012, Formal Power Series and Algebraic Combinatorics, 2012, Nagoya, Japan – O. Beaumont, program committee member of IPDPS 2009, 2010, 2012, 2013, 2014 – O. Beaumont, program committee member of SC 2014 – O. Beaumont, program committee member of PODC 2010 – O. Beaumont, program committee member of HIPC 2010 – O. Beaumont, program committee member of ICPADS 2009 – O. Beaumont, program committee member of ISCIS 2011, 2012, 2013, 2014 – M. Bousquet-Mélou, SIAM Conference on Discrete Mathematics, Minneapolis, USA, June 2014 – L. Eyraud-Dubois, program committee member of IPDPS 2011, 2013, 2014 – L. Eyraud-Dubois, program committee member of HiPC 2013, 2014 – C. Gavoille, International Workshop on Graph-Theoretic Concepts in Computer Science (WG), 2014 – C. Gavoille, Annual ACM Symposium on Principles of Distributed Computing (PODC), 2014 – C. Gavoille, IEEE International Parallel & Distributed Processing Symposium (IPDPS), 2014 – C. Gavoille, Annual ACM Symposium on Principles of Distributed Computing (PODC), 2013 – C. Gavoille, International Colloquium on Automata, Languages and Programming (ICALP), 2013 – C. Gavoille, IEEE International Parallel & Distributed Processing Symposium (IPDPS), 2013 – C. Gavoille, Symposium on Discrete Algorithms (SODA), 2013 – C. Gavoille, International Symposium on Distributed Computing (DISC), 2012 – C. Gavoille, International Symposium on Algorithms and Computation (ISAAC), 2012 – C. Gavoille, International Conference on Distributed Computing and Networking (ICDCN), 2012 – C. Gavoille, Annual European Symposium on Algorithms (ESA), 2011 – C. Gavoille, International Conference on Principles of Distributed Systems (OPODIS), 2009 – N. Hanusse, program commitee member of STACS 2011 – N. Hanusse, program commitee member of Parallel Data Mining 2011 F.1. COMBINATORICS AND ALGORITHMS 219 – D. Ilcinkas, program committee member of SIROCCO 2009 (16th International Colloquium on Structural Information and Communication Complexity) – D. Ilcinkas, program committee member of DYNAS 2009 (1st International Workshop on DYnamic Networks - Algorithms and Security) – D. Ilcinkas, program committee member of DIALM-POMC 2010 (6th ACM SIGACT/SIGMOBILE International Workshop on Foundations of Mobile Computing) – D. Ilcinkas, program committee member of DISC 2011 (25th International Symposium on DIStributed Computing) – D. Ilcinkas, program committee member of ALGOSENSORS - Track B 2011 (7th International Symposium on Algorithms for Sensor Systems, Wireless Ad Hoc Networks and Autonomous Mobile Entities) – D. Ilcinkas, program committee member of FOMC 2012 (8th ACM SIGACT/SIGMOBILE International Workshop on Foundations of Mobile Computing) – D. Ilcinkas, program committee member of OPODIS 2012 (16th International Conference On Principles Of DIstributed Systems) – D. Ilcinkas, program committee member of ADHOC-NOW 2013 (12th International Conference on Ad Hoc Networks and Wireless) – D. Ilcinkas, program committee member of SIROCCO 2013 (20th International Colloquium on Structural Information and Communication Complexity) – C. Johnen, program committee member of SSS 2013, 15th Symposium on Stabilization, Safety, and Security of Distributed Systems, Osaka, Japan, November 2013 – R. Klasing, SIROCCO 2009, 16th International Colloquium on Structural Information and Communication Complexity, Piran, Slovenia, May 2009 – R. Klasing, MFCS 2009, 34th International Symposium on Mathematical Foundations of Computer Science, August 24-28, 2009, Novy Smokovec, High Tatras, Slovakia – R. Klasing, ADHOC-NOW 2009, 8th International Conference on Ad hoc Networks and Wireless, September 22-25, 2009, Murcia, Spain – R. Klasing, OPODIS 2009, 13th International Conference on Principles of Distributed Systems, Nîmes, France, December 2009 – R. Klasing, STACS 2010, 27th International Symposium on Theoretical Aspects of Computer Science, March 4-6, 2010, Nancy, France – R. Klasing, ALGOSENSORS 2010, 6th International Workshop on Algorithmic Aspects of Wireless Sensor Networks, July 2010, Bordeaux, France – R. Klasing, IWOCA 2010, 21st International Workshop on Combinatorial Algorithms, July 26-28, 2010, London, United Kingdom – R. Klasing, ADHOC-NOW 2010, 9th International Conference on Ad Hoc Networks and Wireless, August 20-22, 2010, Edmonton, Canada – R. Klasing, SIROCCO 2011, 18th International Colloquium on Structural Information and Communication Complexity, June 26-29, 2011, Gdansk, Poland – R. Klasing, FOMC 2011, 7th ACM SIGACT/SIGMOBILE International Workshop on Foundations of Mobile Computing (formerly known as DIALM-POMC), June 9, 2011, San Jose, California, USA – R. Klasing, ADHOC-NOW 2011, 10th International Conference on Ad Hoc Networks and Wireless, July 18-20, 2011, Paderborn, Germany – R. Klasing, IWOCA 2011, 22nd International Workshop on Combinatorial Algorithms, June 20-22, 2011, University of Victoria, Canada – R. Klasing, ADHOC-NOW 2012, 11th International Conference on Ad Hoc Networks and Wireless, July 9-11, 2012, Belgrade, Serbia – R. Klasing, FOMC 2012, 8th ACM SIGACT/SIGMOBILE International Workshop on Foundations of Mobile Computing (formerly known as DIALM-POMC), July 19, 2012, Madeira, Portugal – R. Klasing, IWOCA 2012, 23rd International Workshop on Combinatorial Algorithms, July 19-21, 2012, Kalasalingam University, Anand Nagar, Krishnankoil, Tamil Nadu, India 220 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – R. Klasing, ALGOSENSORS 2013, 9th International Symposium on Algorithms and Experiments for Sensor Systems, Wireless Networks and Distributed Robotics, September 5-6, 2013, Sophia Antipolis, France – R. Klasing, ADHOC-NOW 2013, 12th International Conference on Ad Hoc Networks and Wireless, July 8-10, 2013, Wrocław, Poland – R. Klasing, FCT 2013, 19th International Symposium on Fundamentals of Computation Theory, Liverpool, United Kingdom, August 19-21, 2013 – R. Klasing, IWOCA 2013, 24th International Workshop on Combinatorial Algorithms, Rouen, France, July 10-12, 2013 – R. Klasing, SEA 2013, 12th International Symposium on Experimental Algorithms, June 5-7, 2013, Rome, Italy – R. Klasing, IWOCA 2014, 25th International Workshop on Combinatorial Algorithms, October 15 - 17, 2014, Minnesota, USA – R. Klasing, ADHOC-NOW 2014, 13th International Conference on Ad Hoc Networks and Wireless, June 22-27, 2014, Benidorm, Spain – R. Klasing, WALCOM 2015, The 9th International Workshop on Algorithms and Computation, February 26-28, 2015, Dhaka, Bangladesh – A. Kosowski, programme committee member of DISC 2013 (27th International Symposium on Distributed Computing, Jerusalem, September 2013) – A. Kosowski, programme committee member of COCOA 2013 (7th Annual International Conference on Combinatorial Optimization and Applications, Chengdu, December 2013) – A. Kosowski, programme committee member of SSS 2013 (15th International Symposium on Stabilization, Safety, and Security of Distributed Systems, Osaka, November 2013) – A. Kosowski, programme committee member of ADHOC-NOW 2013 (12th International Conference on Ad Hoc Networks and Wireless, Wroclaw, July 2013) – A. Kosowski, programme committee member of MFCS 2012 (37th International Symposium on Mathematical Foundations of Computer Science, Bratislava, August 2012) – A. Kosowski, programme committee member of SSS 2012 (14th International Symposium on Stabilization, Safety, and Security of Distributed Systems, Toronto, September 2012) – A. Kosowski, programme committee member of SEA 2012 (11th International Symposium on Experimental Algorithms, Bordeaux, June 2012) – A. Kosowski, programme committee member of ICDCN 2012 (13th International Conference on Distributed Computing and Networking, Hong Kong, January 2012) – A. Kosowski, programme committee member of DISC 2011 (25th International Symposium on Distributed Computing, Rome, September 2011) – A. Kosowski, programme committee member of SIROCCO 2011 (18th International Colloquium on Structural Information and Communication Complexity, Gdańsk, June 2011) – A. Kosowski, programme committee member of IMAGINE 2009 (International Workshop on Mobility, Algorithms, Graph Theory in Dynamic Networks, Piran, Slovenia, May 2009) – selection of invited speakers – A. Kosowski, programme committee member of DYNAS 2009 and DYNAS 2010 (International Workshop on DYnamic Networks: Algorithms and Security) – Y. Métivier, program committee member of SOFSEM 2015 – A. Milani, program committee member of SIROCCO 2014 (21th International Colloquium on Structural Information and Communication Complexity) – A. Milani, program committee member of ICDCN 2014 (15th International Conference on Distributed Computing and Networking) – A. Milani, program committee member of OPODIS 2013 (17th International Conference on Principles of Distributed Systems) – A. Milani, program committee member of OPODIS 2012 (16th International Conference on Principles of Distributed Systems) F.1. COMBINATORICS AND ALGORITHMS 221 – A. Milani, program committee member of ICDCN 2011 (12th International Conference on Distributed Computing and Networking) – A. Milani, program committee member of CFSE 2011 (8th French Conference on Operating Systems) – A. Milani, program committee member of CSE 2011 (14th International Conference on Computational Science and Engineering) – A. Pêcher, programme committee member of 9th ICGT 2014 (International Conference on Graph Theory) – A. Pêcher, programme committee member of BGW 2014 (Bordeaux Graph Workshop) – A. Pêcher, programme committee member of Roadef 2014 – A. Raspaud, programme committee member of BGW 2012 (Bordeaux Graph Workshop) – A. Raspaud, programme committee member of BGW 2014 (Bordeaux Graph Workshop) – A. Raspaud, program committee member of Eurocomb’11 (European Conference on Combinatorics, Graph Theory and Applications 2011) – A. Raspaud, program committee member of Eurocomb’13 (European Conference on Combinatorics, Graph Theory and Applications 2013) – A. Raspaud, program committee member of COSI 2012, COSI 2013, COSI 2014 (Colloque sur l’Optimisation et les Systèmes d’Information) – N. Rougier, International Conference on Artificial Neural Netorks (ICANN), 2014 – E. Sopena, program committee member of G-COM 2011, IEEE/WIC/ACM International Workshop on Graphs and Complex Object Matching, 2011, Lyon, France – E. Sopena, program committee member of Eurocomb’09 (European Conference on Combinatorics, Graph Theory and Applications 2009) – E. Sopena, program committee member of Eurocomb’11 (European Conference on Combinatorics, Graph Theory and Applications 2011) – C. Travers, program committee member of DISC 2013 (27th International Symp osium on Distributed Computing) – C. Travers, program committee member of ICDCS 2013 (33rd International Conference on Distributed Computing Systems) – C. Travers, program committee member of SIROCCO 2014 (21th International Colloquium on Structural Information and Communication Complexity) – C. Travers, program committee member of Euro-PAR 2014 (19th International European Conference on Parallel and Distributed Computing) – A. Zvonkine, program committee member, Riemann Surfaces and Dessins d’Enfants, 2010, Castro Urdiales, Spain Program committee (national) – F. Alexandre, program committee member of Conférence Francophone sur l’Apprentissage Automatique (CAp), 2012 – F. Alexandre, program committee member of Conférence Francophone sur l’Apprentissage Automatique (CAp), 2013 – N. Bonichon, program committee member of ALGOTEL 2012 (14èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications) – C. Gavoille, Journées Doctorales en Informatiques et Réseaux (JDIR), 2010 – C. Gavoille, Rencontres Francophones sur les aspects Algorithmiques des Télécommunications (AlgoTel), 2010 – N. Hanusse, program commitee member of Algotel 2010, 2011 – N. Hanusse, program commitee member of MARAMI 2011 – D. Ilcinkas, program committee member of AlgoTel 2009 (11èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications) – D. Ilcinkas, program committee member of MARAMI 2010 (1ère Conférence sur les Modèles et l’Analyse des Réseaux : Approches Mathématiques et Informatique) 222 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – D. Ilcinkas, program committee member of AlgoTel 2011 (13èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications) – D. Ilcinkas, program committee member of AlgoTel 2013 (15èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications) – A. Pêcher, programme committee member of Journées Graphes (2013) – A. Pêcher, programme committee member of Ecole Jeunes Chercheurs en théorie des graphes (2013) – C. Travers, program committee member of ALGOTEL 2013 (15th French symposium on ALGOrithmic aspects of TELecommunications) – C. Travers, program committee member of ALGOTEL 2014 (16th French symposium on ALGOrithmic aspects of TELecommunications) Chair of organizing committee (international) – Bordeaux Workshop on Identifying Codes (BWIC 2011), Bordeaux, France, 2011, R. Klasing, chair – 37th International Colloquium on Automata, Languages and Programming (ICALP 2010), July 2010, Bordeaux. (C. Gavoille was the Conference Co-Chair, R. Klasing was the Workshops Chair, N. Bonichon and L. Eyraud-Dubois were Publicity Chairs) – 11th International Symposium on Experimental Algorithms (SEA 2012), Bordeaux, France, R. Klasing, chair – NeuroComp, french annual meeting in computational neuroscience, Bordeaux, 2012, F. Alexandre, chair Chair of organizing committee (national) – Robots & Corps conference, Nancy, 2012, N. Rougier, chair Organizing committee (international) – Analysis of Algorithms 2014, Paris, M. Bousquet-Mélou – Analytic Combinatorics, in the memory of Ph. Flajolet, 2011, Paris, M. Bousquet-Mélou – Annual ACM Symposium on Principles of Distributed Computing (PODC), 2010, Zürich, C. Gavoille, treasurer – Annual meeting of the CNRS GDR “Multi-electrodes”, Bordeaux 2013, F. Alexandre – Bordeaux Graph Workshop 18-28 November 2010, 21-24 November 2012, 19-22 November 2014 (every 2 years since 2010), O. Baudon, N. Bonichon, O. Delmas, P. Dorbec, H. Hocquard, F. Kardos, R. Klasing, A. Pêcher, A. Raspaud, E. Sopena – Bordeaux Workshop on Identifying Codes, Bordeaux, 2011, O. Delmas, P. Dorbec, F. Foucauld, R. Klasing, M. Montassier, A. Pêcher, A. Raspaud, G. Renault, É. Sopena, P. Valicov – Enumerative Combinatorics, 2014, Oberwolfach, M. Bousquet-Mélou – European Conference on Combinatorics, Graph Theory and Applications (EuroComb2009) Bordeaux, 7-11th September 2009 - Mireille Bousquet-Melou, Robert Cori, Olivier Delmas, Philippe Duchon, Ralf Klasing, Mickaël Montassier, Arnaud Pêcher, André Raspaud, C. Gavoille – GASCOM, Génération aléatoire de structures combinatoires et Journée G.X. Viennot, 2012, Bordeaux. M. Bousquet-Mélou, M. Bouvel, R. Cori, JG. Penaud, D. Renault, A. Zemmari – Permutation Patterns 2013, Paris, M. Bouvel – SIROCCO 2011, 18th International Colloquium on Structural Information and Communication Complexity, Gdansk, Poland, A. Kosowski – Toward Evolutive Routing Algorithms for scale-free/internet-like NETworks (TERA-NET), 2010, Bordeaux, C. Gavoille – Workshop Cycles and Colourings, Nový Smokovec, Slovakia, 9-14 September 2012, 8-13 September 2013, 7-12 September 2014, F. Kardos – 2nd Workshop TERANET 2011 (Toward Evolutive Routing Algorithms for scale-free/internet-like NETworks), Rome, Italy, September 19, 2011, D. Ilcinkas Organizing committee (national) – Journées ALEA 2013, Cirm, Luminy, A. Boussicault, M. Bouvel, V. Féray F.1. COMBINATORICS AND ALGORITHMS 223 – – – – Sage-Combinat Days 57, Cernay-La-Ville, A. Boussicault, Vincent Delecroix Journées combinatoires de Bordeaux, annually since 2009, J.-C. Aval, J.-F. Marckert Journées en l’honneur de Robert Cori, Bordeaux, 2009. M. Bousquet-Mélou, Y. Le Borgne 8èmes Journées francophones sur les Entrepôts de Données et l’Analyse en ligne (EDA’12), Bordeaux. S. Maabout, M. Mosbah, A. Zemmari – School of Graph Theory, St Pierre d’Oléron, 2013, P. Dorbec, A. Pêcher, É. Sopena Research animation (international) – Young Scientists Academy of the Polish Academy of Sciences (A. Kosowski) Research animation (national) – Conseil scientifique de l’INSMI (Institut national des sciences mathématiques et de leurs applications, CNRS) (M. Bousquet-Mélou) – Conseil scientifique de la FSMP (Fondations des sciences mathématiques de Paris) (M. Bousquet-Mélou) – Co-Head of the “Graphs” group within the GDR Informatique Mathématique 2010-2013 (A. Pêcher) – Co-Head of the COA group within the GDR Informatique Mathématique since 2012 (C. Gavoille) – Head of the “Algorithms and Combinatorics” group within the GDR Informatique Mathématique (Sopena) – Member of the Cocor ALLISTENE alliance – Scientific Deputy of Inria Bordeaux Sud-Ouest, 2010- (O. Beaumont) Service as expert or evaluator Membership in expert committee (international) – Hiring committee for an assistant professor position in Mathematics, University of Geneva, 2012 (M. Bousquet-Mélou) Membership in expert committee (national) – AERES expert for the LIGM, Marne-la-Vallée (M. Bousquet-Mélou, 2013) – AERES expert for the LIPN, Paris Nord (Ph. Duchon, 2012) – AERES expert for the LIX, Polytechnique (Y. Métivier, 2014) – AERES expert for the LITA, Metz University (N. Hanusse, 2011) – AERES expert for the LRI, Paris XI University (N. Hanusse, 2013) – AERES expert for the LIFO, Orléans, (C. Gavoille, 2010) – AERES expert for the LINA, Nantes, (C. Gavoille, 2010) – AERES expert for the PRISM, Versailles (C. Gavoille, 2013) – Expert for the National PES 27e committee (C. Gavoille, 2010-2013) – Hiring committee for an assistant professor and full professor positions in Mathematics and Computer Science, Bordeaux, 2009, 2012 (M. Bousquet-Mélou) – Hiring committee for an assistant professor position in Computer Science, Marne la Vallée, 2009 (M. Bousquet-Mélou) – Hiring committee for an assistant professor position in Mathematics, University of Toulouse, 2012 (J.-F. Marckert) – Hiring committee for an assistant professor position in Mathematics, University of Bordeaux, 2011 (J.-F. Marckert) – Hiring committee for an assistant professor position in Computer science, University of Bordeaux, 2012 (J.-F. Marckert) – Hiring committee for an assistant professor position in Computer Science, University of Evry (R. Klasing, 2010) – Hiring committee for an assistant professor position in Mathematics, University Paris 6 (M. Bouvel, 2012) – Hiring committee for an assistant professor position in Computer Science, University Paris-Est Marne-LaVallée (V. Féray, 2010-2012-2013) 224 – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Hiring committee for an assistant professor position in Mathematics, University of Caen (V. Féray, 2012) Member of recruitment committee of associated professor, University of Picardie, France (C. Johnen) Member of the scientific committee of the CNRS PEPS program (F. Alexandre, 2012 and 2013) Member of recruitment committee of associate professor, Université d’Aix-Marseille, France (D. Ilcinkas, 2012) Member of “Commission Nationale PES” (E. Sopena, 2009, 2010, 2012) Member of the Evaluation Committee of the programme “ANR DEFIS” (R. Klasing, 2009) Member of the section 27 (Computer Science) of the National Council of Universities CNU (Y. Métivier, since 2012) Member of the section 27 (Computer Science) of the National Council of Universities CNU (O. Baudon, since 2012) Member of the section 27 (Computer Science) of the National Council of Universities CNU (N. Bonichon, since 2012) Member of the section 27 (Computer Science) of the National Council of Universities CNU (E. Sopena, 2009-2012) Individual expert (reviewer) (international) – Expert for the NSA Mathematical Sciences Grants Program 2013 (M. Bousquet-Mélou) – Expert Fond Recherche Quebec (F. Alexandre, 2012) – Expert Swiss National Science Foundation (SNSF) (O. Baumont, 2012) – External reviewer for NSERC/CRSNG (Canada) (P. Dorbec, 2013) – Reviewer American Mathematical Society (since 1995, Y. Métivier) – Reviewer of Application for tenure and promotion to Associate Professor, Memorial University of Newfoundland, Canada (R. Klasing, 2010) – Reviewer of Austrian Science Fund proposal, Austria (R. Klasing, 2014) – Reviewer of NSERC Discovery Grant, Canada (R. Klasing, 2010) – Reviewer of US-Israeli Binational Science Foundation (C. Gavoille, 2010) – Reviewer American Mathematical Society (since 1995, Y. Métivier) Individual expert (reviewer) (national) – Expert ANR programme blanc (F. Alexandre, 2012) – Expert ANR programme blanc (P. Dorbec, 2013) – Expert ANR programme blanc (J.-C. Aval, 2010) – Expert ANR programme ARPEGE (O. Baumont, 2009) – Expert ANR programme ARPEGE (O. Baumont, 2010) – Expert ANR programme numériques (A. Pêcher, 2013) – Expert ANR programme Jeunes Chercheurs (R. Klasing, 2010) – Expert ANR programme Jeunes Chercheurs (A. Zvonkine, 2012) – Expert ANR programme Jeunes Chercheurs (A. Zvonkine, 2013) – Expert ANRT Cifre (A. Pêcher, 2013) – Expert Digiteo-DigiCosme proposal (R. Klasing, 2013) – Expert ITMO ‘Neurosciences, Sciences Cognitives, Neurologie, Psychiatrie (F. Alexandre, 2013) – Expert Projets Emergence, Mairie de Paris (X. Viennot, 2011) Membership in selection board – Jury du concours d’entrée des ENS, Informatique (Ph. Duchon, 2010-2012) – Jury du concours d’entrée des ENS, Informatique (A. Pêcher, depuis 2013) – Jury IUF junior (Y. Métivier, 2014) Membership in prize jury F.1. COMBINATORICS AND ALGORITHMS 225 – Jury member of the National Prix Specif of PhD thesis Gilles Kahn (C. Gavoille, 2011-2013) Reviewing of PhD or habilitation (international) – O. Beaumont, report on David Clarke’s PhD thesis, University College Dublin, Ireland, 2011 – M. Bousquet-Mélou, Reviewer for Nick Beaton’s PhD Thesis, Melbourne, 2012 – M. Bousquet-Mélou, Reviewer for Jonas Sjöstrand’s habilitation thesis, Stockholm, 2013 – R. Cori, Reviewer for Luca Ferrari tesi, Bologna 2013 – R. Cori, Reviewer for Pasquale Petrullo tesi, Potenza 2011 – C. Gavoille, Reviewer PhD thesis of Amine Boutiche, Université des Sciences et de la Technologie Houari Boumédiène, Algérie, 2012 – C. Gavoille, Reviewer PhD thesis of Ittai Abraham, Jerusalem University, Israel, 2009 – R. Klasing, Reviewer PhD thesis Georgios Georgiadis, Chalmers University, Sweden, 2010 – R. Klasing, Reviewer PhD thesis Ville Junnila, University of Turku, Finland, 2011 – J.-F. Marckert, reviewer Ph.D. thesis Janine Kühn, Frankfurt, 2013 – J.-F. Marckert, reviewer Ph.D. thesis Thomas Feierl, Vienna, 2009 – E. Sopena, report on Rebecca Milley’s PhD thesis, Dalhousie U., Canada, 2013 – X. Viennot, Reviewer for Amel Kaouche PhD thesis, UQAM, Montreal, Canada, 2009 Reviewing of habilitation (national) – M. Bousquet-Mélou, reviewer for Sylvie Corteel’s Habilitation Thesis, Paris, 2010 – M. Bousquet-Mélou, reviewer for Julien Clément’s Habilitation Thesis, Caen, 2011 – M. Bousquet-Mélou, reader for Charles Bordenave’s habilitation Thesis, Toulouse, 2012 – Ph. Duchon, reader, HDR thesis of O. Bodini, Paris 6, 2010 – C. Gavoille, reviewer for Nicolas Nisse HDR, Nice Sophia-Antipolis University, 2014 – N. Hanusse, Reviewer for Jean-Loup Guillaume HDR, Paris 6, 2012 – C. Johnen, reader for Lelia Blin’s habilitation Thesis, Paris, november 2011 – J.-F. Marckert, reviewer HDR thesis N. Curien, Paris 6 (math.), 2013 – Y. Métivier, Reviewer for Devan Sohier HDR thesis, Versailles, 2013 – A. Pêcher, reader, HDR thesis of Bertrand Jouve, Toulouse 2, 2009 – A. Pêcher, reader, HDR thesis of Gautier Stauffer, Bordeaux (IMB), 2011 – X. Viennot, reviewer for Paul Zinn-Justin’s Habilitation Thesis, Paris, 2009 Reviewing of PhD (national) – J.-C. Aval, reviewer and jury member of Robin Langer’s PhD thesis, Université Paris-Est Marne-la-Vallée, 2013 – O. Beaumont, reviewer Ph.D thesis Damien Borgetto, IRIT Toulouse, 2013 – O. Beaumont, reviewer Ph.D thesis Paul Renaud Goud, ENS Lyon, 2012 – O. Beaumont, reviewer Ph.D thesis The Tung Nguyen, INP Toulouse, 2011 – O. Beaumont, reviewer Ph.D thesis Francois Bonnet, University of Rennes, 2010 – O. Beaumont, reviewer Ph.D thesis Gilles Tredan, University of Rennes, 2009 – M. Bousquet-Mélou, reviewer for Adeline Pierrot’s PhD thesis, Paris 7, 2013 – M. Bousquet-Mélou, reviewer for Guillaume Chapuy’s PhD thesis, École Polytechnique, 2009 – Ph. Duchon, reviewer of Julien David’s PhD thesis, Paris Est, 2010 – Ph. Duchon, reviewer of N. Le Scouarnec’s PhD thesis, INSA Rennes, 2010 – Ph. Duchon, reviewer of Hervé Baumann’s PhD thesis, Paris Diderot, 2012 – Ph. Duchon, reviewer of O. Roussel’s PhD thesis, Paris 6, 2012 – C. Gavoille, reviewer for Heger Arfaoui PhD thesis, Université Paris-Diderot, 2014 – C. Gavoille, reviewer for Mikaila Toko Worou PhD thesis, Université Nice Sophia-Antipolis, 2012 – C. Gavoille, reviewer for Jean-François Couturier PhD thesis, Université Paul Verlaine, Metz, 2012 226 – – – – – – – – – – – – – – – – – – – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS C. Gavoille, reviewer for Mathieu Chapelle PhD thesis, Université d’Orléans, 2011 C. Gavoille, reviewer for Julien Robert PhD thesis, Ecole Normale Supérieure de Lyon, 2009 C. Gavoille, reviewer for Patricio Reyes PhD thesis, Université Nice Sophia-Antipolis, 2009 N. Hanusse, reviewer of Thomas Aynaud PhD thesis, University of Paris 6, 2011 N. Hanusse, reviewer of Mauricio Soto PhD thesis, University of Paris 7, 2011 C. Johnen, reviewer of Kudireti Abdurusul’s PhD thesis, University of Reims Champagne-Ardenne, 2011 C. Johnen, reviewer of Julien Clément’s PhD thesis, University of Paris-Sud, 2010 R. Klasing, reviewer of Patricio Reyes’s PhD thesis, University of Nice, 2009 R. Klasing, reviewer for Aline Parreau’s PhD thesis, University of Grenoble, 2012 R. Klasing, reviewer for Marwane Bouznif’s PhD thesis, University of Grenoble, 2012 J.-F. Marckert, reviewer Ph.D. thesis Jérémie Bettinelli, Paris 11, 2011 J.-F. Marckert, reviewer Ph.D. thesis Laurent Ménard, Paris 6, 2009 J.-F. Marckert, reviewer Ph.D. thesis Mathieux Roux, Caen, 2011 J.-F. Marckert, reviewer Ph.D. thesis Antoine Gerbaud,Grenoble, 2010 Y. Métivier, reviewer Ph.D. thesis Hichem Kenniche, Paris 13, 2011 Y. Métivier, reviewer for A. Gaillard’s PhD thesis, Polytechnique, 2009 A. Pêcher, reviewer Ph.D. thesis Alberto Costa, Ecole Polytechnique, 2012 A. Pêcher, reviewer Ph.D. thesis Gilles Baroin, Toulouse, 2011 A. Pêcher, reviewer Ph.D. thesis Jean-Noël Martin, Belfort-Montbéliard, 2010 A. Pêcher, reviewer Ph.D. thesis Jean-Christophe Gaudin, Toulon, 2009 A. Pêcher, reviewer Ph.D. thesis N. Roussel, Bordeaux/Kaohsiung (Taiwan), 2009 E. Sopena, reviewer Valentin Borozan’s PhD thesis, Paris-Sud, 2011 E. Sopena, reviewer Julien Lemoine’s PhD thesis, Lille 1, 2011 E. Sopena, reviewer Simon Modeste’s PhD thesis, Institut J. Fourier, 2012 E. Sopena, reviewer Amin Tahraoui’s PhD thesis, Lyon 1, 2012 E. Sopena, reviewer Leonardo Sampaio Rocha’s PhD thesis, Sophia Antipolis, 2012 X. Viennot, reviewer for Matthieu Josuat-Vergès’s PhD thesis, Université Paris-Sud, 2009 X. Viennot, reviewer for Anisse Kasraoui’s PhD thesis, Université Lyon, 2009 Membership of PhD/habilitation committee (international) – E. Sopena, jury member of Urban Larsson’s PhD thesis, Chalmers University, Goteborg, Sweden, 2013 – E. Sopena, jury member of Amanda Montejano’s PhD thesis, UPC, Barcelona, Spain, 2009 Membership of PhD/habilitation committee (national) – J.-C. Aval, jury member of Jean-Paul Bultel’s PhD thesis, Université Paris-Est Marne-la-Vallée, 2011 – J.-C. Aval, jury member of Viviane Pons’s PhD thesis, Université Paris-Est Marne-la-Vallée, 2013 – J.-C. Aval, jury member of Sandrine Dasse-Hartaut’s PhD thesis, Université Paris 7 Denis Diderot, 2014 – M. Bousquet-Mélou, Jury member for Basile Morcrette’s PhD thesis, Paris 6/INRIA, 2013 – M. Bousquet-Mélou, Jury member for Vincent Pilaud’s PhD thesis, Université P. et M. Curie and Universidad de Cantabria, 2010 – P. Dorbec, jury member of Marwane Bouznif’s PhD thesis, Université Joseph Fourier, Grenoble, 2012 – Ph. Duchon, Jury member of Jean Fromentin’s PhD thesis, Caen, 2009 – Ph. Duchon, Jury member of M. Bouvel’s PhD thesis, Paris Diderot, 2009 – Ph. Duchon, Jury member of Alexis Darasse’s PhD thesis, Paris 6, 2010 – Ph. Duchon, jury member of Émilie Coupechoux’s PhD thesis, Paris Diderot, 2012 – Ph. Duchon, jury member of Hanane Tafat Bouzid’s PhD thesis, Paris Nord, 2012 – C. Gavoille, jury member of Arnaud Masmay PhD thesis, Ecole Normale Supérieure de Paris, 2014 – C. Gavoille, jury member of Nicolas Delfosse PhD thesis, Université de Bordeaux, IMB, 2012 F.1. COMBINATORICS AND ALGORITHMS – – – – – – – – – – – – – 227 C. Gavoille, jury member of Jean Daligault PhD thesis, 07/2011, Université de Montpellier D. Ilcinkas, jury member of Ronan Pardo Soares’s PhD thesis, Université Nice Sophia Antipolis C. Johnen, Jury member of Stéphane Rovedakis’s PhD thesis, University of Evry Val d’Essonne, 2010 R. Klasing, jury member for Cristiana Gomes’s PhD thesis, University of Nice, 2009 R. Klasing, jury member for Zohir Bouzid’s PhD thesis, University Paris 6, 2013 J.-F. Marckert, Jury member Ph.D. thesis Jérémie Lumbroso, Paris 6, 2012 Ph. Narbel, jury member for P. Wang’s PhD thesis, Universite Paris 6, 2012 A. Pêcher, jury member Ph.D. thesis Alberto Passuelo, Bordeaux (IMB), 2013 A. Pêcher, jury member Ph.D. thesis Pierre Aboulker, Paris, 2013 A. Pêcher, jury member Ph.D. thesis Laurent Gely, Bordeaux (IMB), 2010 A. Raspaud, Jury member Ph.D. thesis N. Roussel, Bordeaux/Kaohsiung (Taiwan), 2009 E. Sopena, jury member Simon Viennot’s PhD thesis, Lille 1, 2011 X. Viennot, Jury member for Samuele Giraudo’s PhD thesis, Université Paris-Est Marne-la-Vallée, 2011 Scientific collaborations Projects (international) – CNRS-Cofipra (India) Associate team, F. Alexandre – CNRS-Oxford collaboration Scheme; 2012, M. Bousquet-Mélou – DYNAMO ; European COST Action ; 2005-2009 – EcoSud 2013-2015, France/Argentine Clermont-Bordeaux-Rosario, A. Pêcher – Emerging Project with the University of Perugia, Italy ; 2011 – EULER ; European project FP7 STREP ; 2010-2014 – GraTel-2010-2013, France/Taiwan-Bordeaux-Taipei-Kaoshiung, A. Pêcher-A. Raspaud – Inria-Chile Collaboration, F. Alexandre – LIA LIRCO 2011-2014, Université de Québec à Montréal, Canada, JC. Aval – Microsoft Research SVC consulting, Montainview, USA, 2010, C. Gavoille – Multicomputing ; Programme “FitScience” (France-Israël) ; 2008-2010 – PHC Polonium 2010-2011, University AGH Krakow - Pologne – PHC Proteus 2012-2013, University of Maribor, Slovenia, P. Dorbec – PHC Stefanik 2014-2015, Pavol Jozef Safarik University, Kosice, Slovakia, F.Kardos – PICS 2014-2016, GraphPar - Graph Partition LaBRI-PRiSM-U. Zielona Gora-AGH University – SERENE ; Royal Society Grant with the University of Liverpool, UK ; 2011-2013 Projects (national) – A3 ; ANR Blanc ; 2009-2012 – ALADDIN ; ANR Blanc ; 2007-2011 – DISPLEXITY ; ANR Blanc ; 2012-2015 – DORSO ; ANR Jeunes Chercheurs ; 2011-2015 – EGOS, ANR Jeunes Chercheurs ; 2012-2015 – IDEA ; ANR program “défis” ; 2009-2012 – MARS ; ANR Blanc ; 2007-2010 – PSYCO ; ANR Jeunes Chercheurs ; 2011-2014 – SONGS ; ANR INFRA ; 2012-12016 – USS-SIMGRID ; ANR ; 2008-12012 Joint publications (international) – I. Abraham, Microsoft Research SVC (USA), co-publication, C. Gavoille – M. Albert; University of Otago (New-Zealand); co-publication, M. Bousquet-Mélou 228 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – Michael H. Albert, Mike D. Atkinson, University of Otago (New Zealand), co-publication, M. Bouvel – A. Asinowski, G. Barequet, T. Mansour, R. Pinter; Technion, Haifa (Israel); co-publication, M. BousquetMélou – H. Attiya; Technion, Haifa, Israel; co-publications, A. Milani – I. Bárány, Hungarian Academy of science, and M. Reitzner, Universität Osnabrück (Germany), copublication, J.-F. Marckert – N. Beaton, R. Brak, J. de Gier, T. Guttmann; University of Melbourne (Australia); co-publication, M. Bousquet-Mélou – Petra Berenbrink, Simon Fraser University, Burnaby, Canada, co-publications, R. Klasing, A. Kosowski – François Bergeron, UQAM, Montréal, Canada, co-publications, J.-C. Aval – Abdelhafid Berrachedi, Univ Algiers, Algeria, co-publications, E. Sopena – Davide Bilo, University of Sassari, Italy, co-publications, R. Klasing – Oleg Borodin, Sobolev Institute of Mathematics,Novosibirsk, Russia, co-publications, A. Raspaud – B. Bresar, Univ. Maribor, Slovenia, co-publications, P. Dorbec – Y.B. Chan, University of Brisbane (Australia), co-publication J.-F. Marckert, T. Selig – Gerard Chang, National Taiwan University (Taipei, Taiwan), co-publications “graphs and applications group” – Gerard Chang, National Taiwan University, Taipei, Taiwan, co-publications, A. Raspaud – Cédric Chauve, Marni Mishna, Simon Fraser University (Canada), co-publication, M. Bouvel – S. Chechik, Weizmann Institute (IL), co-publication, C. Gavoille – Min Chen, Normal Zhejiang University,Jinhua, RPC, co-publications, A. Raspaud – A. Claesson, M. Dukes, S. Kitaev, University of Iceland/ of Reykjavik (Iceland) ; co-publication, M. Bousquet-Mélou – Anders Claesson, Mark Dukes, University of Strathclyde (Scotland, UK), co-publication, M. Bouvel – Colin Cooper and Tomasz Radzik (King’s College London, UK), co-publications, D. Ilcinkas, R. Klasing, A. Kosowski – J. Czap, Technical University of Kosice (Slovakia), co-publications, F. Kardos – Jurek Czyzowicz, Andrzej Pelc (Université du Québec, Canada), co-publications, D. Ilcinkas, R. Klasing, A. Kosowski – Michele D’Adderio (Université Libre de Bruxelles, Belgique), co-publications, J.-C. Aval, Y. Le Borgne – Dariusz Dareniowski, Gdansk University of Technology, Poland, co-publications, R. Klasing – Yann Disser and Peter Widmayer’s group (ETH Zürich, Switzerland), co-publication, A. Kosowski – Mark Dukes ( University of Strathclyde, Glasgow, UK), co-publications, J.-C. Aval, Y. Le Borgne – H. Duminil-Copin; University of Geneva (Switzerland); co-publication, M. Bousquet-Mélou – F. Ellen; University of Toronto, Canada; co-publication, A. Milani – Robert Elsässer, University of Salzburg, Austria, co-publications, O. Beaumont – R. Erman, M. Krnc, B. Luzar, R. Skrekovski, Univ Ljubljana (Slovenia), co-publications, F. Kardos – P. Fatourou; Fondation For Research and Technology (FORTH), Crete, Greece; co-publication, A. Milani – A. Fernandez Anta, Institute IMDEA Networks, Madrid, Spain; co-publications, A. Milani – Luca Ferrari, University of Florence (Italy), co-publication, M. Bouvel – Adriano Garsia, UCSD, San Diego, California, USA, co-publications, JC. Aval – Leszek Gasieniec (University of Liverpool, UK), co-publications, D. Ilcinkas, R. Klasing, A. Kosowski – A. Ghatpande, H. Nakazato and H. Watanabe (Waseda University, Tokyo), co-publications, O. Beaumont – W. Goddard, Clemson University, South Carolina, USA, co-publication, P. Dorbec – I. Goulden ; University of Waterloo (Canada) ; co-publication, V. Féray – A. Gupta, Carmegie Mellon University (USA), co-publication, C. Gavoille – Gena Hahn, Université de Montreal , Canada, co-publications, A. Raspaud – B. Hartnell, St Mary’s Univ., Nova Scotia, Canada, co-publications, P. Dorbec F.1. COMBINATORICS AND ALGORITHMS – – – – – – – 229 M.A. Henning, Univ. Johannesburg, South Africa, co-publications, P. Dorbec Gabor Hetyei, Univ Carolina, Charlotte., United States, co-publication, R. Cori Angela Hicks (post doc at Stanford, Californie, USA), co-publications, J.-C. Aval, Y. Le Borgne Lisa Higham, University of Calgary (Canada) , co-publication, C. Johnen I. Honkala, Univ. Turku, Finland, co-publication, P. Dorbec Juraj Hromkovič, ETH Zürich, Switzerland, co-publications, R. Klasing D. Hudak, S. Jendrol, J. Katrenic, J. Miskuf, G. Semanisin, R. Sotak, Pavol Jozef Safarik University in Kosice (Slovakia), co-publications, F. Kardos – Anna Ivanova, Yakutsk State University, Yakutsk, Russia, co-publications, A. Raspaud – P.K. Jha, St. Cloud’s State Univ., Minnesota, USA, co-publication, P. Dorbec – Kamal Kabyl, Univ Béjaia, Algeria, co-publications, E. Sopena – T. Kaiser, Katedra matematiky, Plzen, Czech Republic, co-publication, P. Dorbec – Rafal Kalinowski (AGH University, Krakow Poland), co-publications, O. Baudon, J. Bensmail – D. Kral and J. Volec, University of Warwick (UK), co-publications, F. Kardos – Hye Kyung Kim, Catholic Univ. of Daegu, Kyongsan (Republic of Korea), co-publication, P. Dorbec – Sandi Klavžar, Univ. Ljubljana, Slovenia, co-publication, P. Dorbec – Miroslaw Korzeniowski, Wroclaw University of Technology, co-publications, O. Beaumont – William F. Klostermeyer, Univ North Florida, Jacksonville, USA, co-publications, A. Raspaud, E. Sopena – Gašper Košmrlj, Univ. Ljubljana, Slovenia, co-publication, P. Dorbec – Evangelos Kranakis (Carleton University, Canada), co-publications, A. Kosowski – L. Kuszner, University of Gdansk (POL), C. Gavoille – Sergei Lando (Higher School of Economics and Independent University of Moscow, Moscow, Russia), co-publication A. Zvonkine – M. Lohrey, E. Noeth, Universität Leipzig (Germany) ; co-publication, M. Bousquet-Mélou – Z. Lotker, Ben-Gurion University (IL), C. Gavoille – Christian Löwenstein, Ulm Univ., Germany, co-publication, P. Dorbec – Edita Macajova, Comenius University, Bratislava, Slovaquie, co-publications, A. Raspaud – Gary MacGillivray, Univ Victoria, Victoria, Canada, co-publications, A. Raspaud, E. Sopena – D. Malkhi, Microsoft Research SVC (USA), co-publication, C. Gavoille – S. Maneth, University of Edimburg (Scottland) ; co-publication, M. Bousquet-Mélou – M. Markiewicz, University of Gdansk (POL), C. Gavoille – Antoni Marzyk (AGH University, Krakow Poland), co-publications, O. Baudon, J. Bensmail – George B. Mertzios, University of Durham, UK, co-publications, R. Klasing – F. Meyer auf der Heide, University of Paderborn (GER), co-publication, C. Gavoille – M. Mishna, Simon Fraser University (Canada) ; co-publication, M. Bousquet-Mélou – Tobias Mömke, KTH Royal Institute of Technology, Stockholm, Sweden and Unviersity of Saarland, Saarbrücken, Germany, co-publications, R. Klasing – Amanda Montejano, Univ Mexico, Mexico, co-publications, E. Sopena, A. Raspaud – A. Navarra, University of Rome “Sapienza”, C. Gavoille – O. Neiman, Ben-Gurion University (IL), co-publication, C. Gavoille – Fedor Pakovich (Ben Gurion University of the Negev, Beer Sheva, Israel), deux co-publications A. Zvonkine – Adrian Palacios, University of Valparaiso (Chile), co-publication, F. Alexandre – B. Patt-Shamir, Tel-Aviv University (IL), co-publication, C. Gavoille – A. Pelc, University of Quebec (CAN), C. Gavoille – D. Peleg, Weizmann Institute (IL), C. Gavoille – Ljubomir Perkovic (DeP. University, Chicago, USA), co-publications, N. Bonichon, C. Gavoille, N. Hanusse – L. Perkovic, DePaul University (USA), co-publication, C. Gavoille 230 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – Joseph G. Peters, Simon Fraser University, Burnaby, Canada, co-publications, R. Klasing – Monika Pilsniak (AGH University, Krakow Poland), co-publications, O. Baudon, F. Foucaud, J. Bensmail – Cristina M. Pinotti, Alfredo Navarra and Gabriele Di Stefano (University of Pisa / University of Perugia, Italy), co-publications, R. Klasing, A. Kosowski – L.-F. Préville-Ratelle; UQAM, Montréal (Canada); co-publication, M. Bousquet-Mélou – L.-F. Préville-Ratelle; U. Talca (Chile), co-publication, X. Viennot – Guido Proietti, University of L’Aquila, Italy and CNR, Rome, Italy, co-publications, R. Klasing – J. Propp; UMass Lowell (USA); co-publication, M. Bousquet-Mélou – Jakub Przybylo (AGH University, Krakow Poland), co-publications, O. Baudon, F. Foucaud, J. Bensmail – J. Pykacz, University of Gdansk (POL), C. Gavoille – Douglas Rall, Furman’s Univ., South Carolina, USA, co-publication, P. Dorbec – Ivan Rapaport (University of Chile), co-publications, A. Kosowski – V. Reiner ; University of Minnesota (USA) ; co-publication, V. Féray – Edita Rollova, Univ West Bohemia, Plzen, Czech Republic, co-publications, E. Sopena – A. Rosenberg (University of Massachusetts Amherst), co-publications, O. Beaumont – Nik Ruskuc, University of Saint Andrews (Scotland, UK), co-publication, M. Bouvel – Thomas Sauerwald (University of Cambridge, UK and MPII Saarbrücken, Germany), co-publication, R. Klasing, A. Kosowski – C. Scheideler, University of Paderborn (GER), co-publication, C. Gavoille – I. Schiermeyer, Tech. Univ. Freiberg (Germany), co-publication, F. Kardos – Domenico Senato, Univ Potenza, Basilicate., Italy, co-publication, R. Cori – Martin Skoviera, Comenius University, Bratislava, Slovaquie, co-publications, A. Raspaud – P. Śniady ; University of Wrocław(UK) ; co-publication, V. Féray – C. Sommer, MIT (USA), co-publication, C. Gavoille – P. Spirakis, Patras University (GRE), C. Gavoille – Karol Suchan (Universidad Adolfo Ibáñez, Chile), co-publications, A. Kosowski – K. Talwar, Microsoft Research SVC (USA), co-publication, C. Gavoille – Li-Da Tong, Sun Yat-sen University, Kaohsiung, Taiwan, co-publications, A. Raspaud – A. Twigg, Oxford University (UK), C. Gavoille – T. Tylec, University of Gdansk (POL), C. Gavoille – C. Ulcigrai, Bristol (UK) ; co-publication, V. Delecroix – Vince Vatter, University of Florida (USA), co-publication, M. Bouvel – Haichao Wang, Shanghai University of Electric Power, China, co-publication, P. Dorbec – Weifan Wang, Normal Zhejiang University, Jinhua, RPC, co-publications, A. Raspaud – K. Weller; Oxford (UK); co-publication, M. Bousquet-Mélou – J. West, Bristol (UK) ; co-publication, M. Bousquet-Mélou – Mariusz Wozniak (AGH University, Krakow Poland), co-publications, O. Baudon, F. Foucaud, J. Bensmail – Weiliang Zhao, Zhejiang Industry Polytechnic College, Shaoxing,China, co-publication, P. Dorbec – U. Wieder, Microsoft Research SVC (USA), co-publication, C. Gavoille – Xuding Zhu, Zhejiang Normal University (Jinhua, China), co-publication “graphs and applications group” Research visitors (international) – M. Albert ; Otago University (New-Zealand) ; 2012 (1 month) – S. Alstrup, University of Copenhagen (DK), 2014 (1 week) – Petra Berenbrink, Simon Fraser University, Burnaby, Canada, 22/10-26/10/2013 – F. Bergeron, Montréal, Canada. 2010 (1 month) – S. Bianchi ; Rosario University (Argentina) ; 2013 (1 month) – Davide Bilo, University of L’Aquila, Italy 30/08-15/09/2010 F.1. COMBINATORICS AND ALGORITHMS 231 – A. Bogatyrev, Institute of Numerical Mathematics of the Russian Academy of Scencies, Moscow (Russia), 2012 (1 month) – J. Bose, Carleton University (CAN), 2013 (1 week) – Colin Cooper, King’s College London, UK 1 month in 2008 – Jurek Czyzowicz, Université du Québec, Canada 1 month in 2010 – M. d’Adderio, Max Planck Institut (Bonn, Allemagne), 2012 (1 month) – Dariusz Dareniowski, Gdansk University of Technology, Poland, 08/06 – 28/06/2012 – Y. Dieng, University of Ziguinshor (SEN), 2011-2013 (2 month) – F. Ellen; University of Toronto (Canada) ; 2013 (1 month) – Robert Elsässer, University of Paderborn, Germany 31/08-12/10/2007 – L.S. Ferrari, Université de Bologne (Italie), 2012 (1 month ) – Leszek Gasieniec, University of Liverpool, UK 1 month in 2009 – Gabor Hetyie, Univ. Carolina, Charlotte, United States, 2011 (1 month) – M. Josuat-Vergès, Vienna, Austria. 2010 (1 month) – T. Kaiser; Univ. West Bohemia, Pilsen (Czech Republic), 2010 (1 month) – Samia Kerdjoudj, USTHB , Alger, Algérie, 2014 (1 month) – Miroslaw Korzeniowski, Wroclaw University of Technology, Poland 6 months in 2012 – Sandi Klavžar, Univ. Ljubljana, Slovenia, 2013 (1 month) – Miroslaw Korzeniowski, Wroclaw University of Technology, Poland 1.7.-29.7.2011 – Gašper Košmrlj, Univ. Ljubljana, Slovenia, 2012-2013 (4 months) – George B. Mertzios, University of Durham, UK 17.6.-14.7.2012 – M. Mishna ; Simon Fraser University (Canada) ; 2012-2013 (1 year) – Tobias Mömke, KTH Royal Institute of Technology, Stockholm, Sweden 17.7.-31.7.2011 – A. Montejano, UNAM (Mexico), 2011 (1 month) – P. Nadeau, Vienne, Austria. 2010 (1 month) – F. Pakovich, Ben Gurion University of the Negev, Beer Sheva (Israel), 2010 (1 month) – F. Pakovich, Ben Gurion University of the Negev, Beer Sheva (Israel), 2014 (1 month) – L. Perkovic ; DeP. University (USA) ; 2012 (1 year) – Joseph G. Peters, Simon Fraser University, Burnaby, Canada, 24/01-24/02/2013 – J. Przybylo ; AGH University (Poland) ; 2012 (15 days) – Tomasz Radzik, King’s College London, UK 1 month in 2008 – A. Rattan, London, 2010 (1 month) – Thomas Sauerwald, MPI Saarbruecken, Germany 01/11-15/11/2010 – I. Schiermeyer, Tech. Univ. Freiberg (Germany), 2011 (1 month) – O. Serra ; UPC Barcelona (Spain) ; 2013 (1 month) – E. Sidorowicz, U. Zielona Gora (Poland), 2011 (1 month) – B. Stevens ; Carleton University (Canada) ; 2013-2014 (1 year) – M. Wozniak ; AGH University (Poland) ; 2013 (1 month) Research visitors (national) – N. Broutin, Inria Rocquencourt. 2010 (1 month) – É. Fusy, LIX, École polytechnique. 2011 (1 month) – P. Gambette, Institut de Mathématiques de Luminy. 2011 (1 month) – P. Méliot, Université de Marne-La-Vallée. 2011 (1 month) – Pascal Ochem; LRI; 2011 (1 week) – Petru Valicov; ENS Lyon; 2014 (1 week) Research visits (international) 232 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – J.-C. Aval, UQAM, Montréal, Canada, 2012 (2 weeks) – N. Bonichon, Univ. Ottawa Canada, 2013 (1 week) – M. Bousquet-Mélou, MSRI Berkeley 2012 (two weeks) – M. Bousquet-Mélou, Schrödinger Institute, Vienna 2014 (two weeks) – A. Boussicault, UQAM, Montréal, Canada, 2014 (2 weeks) – R. Cori, MSRI, Berkeley California, United States, 2012 (three weeks) – R. Cori, VIASM, Hanoi, Vietnam, 2013,(1 month) – P. Dorbec, Univ. Cochin, India, 2014 (two weeks) – V. Féray, Waterloo, 2010, (1 month) – D. Ilcinkas, Université du Québec en Outaouais, Gatineau, Canada, 2009 (1 week) – D. Ilcinkas, Université d’Ottawa, Ottawa, Canada, 2009 (1 week) – F. Kardos, University of Warwick, UK, 2014 (1 week) – F. Kardos, University of Ljubljana, Slovenia, 2014 (1 week) – J.-F. Marckert, Graz, 2009, (1 month) – F. Mazoit, University of Waterloo, 2009 (2 weeks) – F. Mazoit, University of Hamburg, 2013 (3 weeks) – A. Milani, University of Toronto, Canada, 2011 (two weeks) – A. Milani, Technion, Haifa, Israel, 2011 (two weeks) – A. Pêcher, National Sun Yat-sen University, Taiwan, 2009 (2 weeks) – A. Pêcher, National Taiwan University, Taiwan, 2011 (2*2 weeks) – A. Pêcher, Université Polytechnique de Catalogne, Spain, 2013 (1 week) – A. Pêcher, Indian Institute of Science, Bangalore, India, 2013 (1 week) – A. Raspaud, National Sun Yat-sen University, Taiwan, 2009 (2 weeks) – A. Raspaud, National Taiwan University, Taiwan, 2011 (2*2 weeks) – A. Raspaud, Normal Zhedjiang University, Jinhua, RPC 2012 (2 weeks) – A. Raspaud, Department of Mathematics, University of Illinois at Urbana Champaign, USA 2013 (2 weeks) – A. Raspaud, Department of Computer Science and Automaton, Indian Institute of Science, Bangaore, India, 2013 (2 weeks) – N. Rougier, NII, Tokyo, Japan, 2011 (1 month) – X. Viennot, UQAM, Montreal, Canada, 2009 (1 week) – X. Viennot, Frutillar, Chile, 2009 (1 week) – X. Viennot, CMI, Chennai, India, 2010 (1 month) – X. Viennot, TIFR, Mumbai, India, 2010 (1 month) – X. Viennot, Universidad de Talca, Talca, Chile, 2010/2011 (2 months) – X. Viennot, Indian Institute of Science, Bangalore, India, 2012 (1 week) – X. Viennot, IIT Bombay, Mumbai, India, 2013 (1.5 month) – X. Viennot, TIFR, Mumbai, India, 2013 (2 weeks) – X. Viennot, Universidad de Talca, Talca, Chile, 2013/2014 (2 months) – X. Viennot, Valparaiso, Chile, 2014 (1 week) – X. Viennot, E. Schrödinger Institute, Vienna, Austria, 2014 (3 weeks) – A. Zvonkine, Ben Gurion University of the Negev, Beer Sheva, Israel, 2011 and 2014 (twice two weeks) F.1. COMBINATORICS AND ALGORITHMS F.1.3 233 Involvement with social, economic and cultural actors Collaborations with the industry Industrial contracts – Alcatel-Lucent-Bell ; Compact Routing Scheme in Dynamic Networks ; 2009-2010 – European project FP7 STREP ”EULER” (2010-2014) – Investissement d’Avenir SPEEDDATA (Distributed Data Mining Computing, with AT-Internet) – SIMID (Aeronautics; partners: Airbus, Dassault Aviation, Eurocopter, Equip’ aero Services, 2MoRO Solutions, Vinci Consulting and the laboratories IMS and LaBRI) General audience actions Learned society, federation (national) – O. Baudon: Member of the Administrative Council of the Société informatique de France – E. Sopena: Member of the Administrative Council of the Société informatique de France Scientific popularization, dissemination of scientific culture – F. Alexandre, Participation in the program “Science Publique” on the french national radio France Culture, 2013 – N. Bonichon, Seminars in secondary schools for the mathematics week, 2014 – M. Bousquet-Mélou, Presentation at the IREM (Institut de Recherche sur l’Enseignement des Mathématiques) days, Bordeaux, May 2014 – A. Boussicault, Math.en.jeans, general audience workshops, 2013-2014 – A. Boussicault, P. Dorbec, O. Guibert, Y. Le Borgne, E. Sopena: Animation of workshops MATh.en.JEANS – M. Bouvel, V. Féray, Participation in the associative projet Mat’les Vacances – P. Dorbec, Implementation of Maths à modeler, General audience workshops, 2012-2014 – P. Dorbec, Math.en.jeans, General audience workshops, 2012-2014 – P. Dorbec, Participation in the SIF congress, 2014 – P. Dorbec et al., Animation of workshops Maths à Modeler en Aquitaine – V. Féray, Presentation at the Mathematical Park, IHP, novembre 2013 – Y. Le Borgne, Café scientifique. Consulat de France à Vancouver, 2014 – F. Mazoit, Math.en.jeans, General audience workshops, 2011-2012 – N. Rougier, Café scientifique around robotics, Epinal, 2012 – N. Rougier, Scientific movie festival, meeting with the general public, Nancy, 2012 – N. Rougier, F. Alexandre, Neurosciences days (Lunéville, 2009) – N. Rougier, Participation in the project science-info-lycée – X. Viennot, Wide audience conference, with G. Duchamp violin (video) and M. Pig Lagos texts and traduction, Olmue, Chile, December 2010 – X. Viennot, Conference at the Lycée Brizeux, Quimper, November 2011 – X. Viennot, Conference at the Pope John-Paul II College of Education, Pondicherry, India, February 2012 – X. Viennot, closing conference, Journées nationales de l’APMEP, with G. Duchamp violin, Metz, October 2012 – X. Viennot, conference at the Lycée Victor-Louis, Talence, November 2012 – X. Viennot, Wide audience conference, cycle “Science et société”, with G. Duchamp violin and M. Pig Lagos texts, Nancy, May 2013 – X. Viennot, Journées nationales de l’APMEP: animation of two workshops and presentation at the “souk des maths”, with G. Duchamp violin, Marseille, October 2013 – X. Viennot, Wide audience conference, Cultural Center, Universidad de Talca„ with G. Duchamp violin (video) and M. Pig Lagos texts and traduction, Talca, Chile, December 2013 234 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – X. Viennot, Conference for the students of Lycée Saint-Jean-Pied-de-Port, “Journées jeunes chercheurs lycéens”, Université de Pau, Mars 2014 – X. Viennot, Conference for students of colleges and lycées of the national competition Kangourou, Paris, May 2014 – X. Viennot, Wide audience conference, French Institute Vienna, with G. Duchamp violin, C.Krattenthaler piano and M. Pig Lagos texts, Vienna, June 2014 Publications for large audience – P. Dorbec, Article in Tangente éducation, 2013 – N. Rougier, Production of a popular science poster explaining research in computer science, 2010 – E. Sopena, Editor-in-Chief of 1024, bulletin of the ”Société informatique de France” – X. Viennot, Article dans Tangente, 2009 F.2. IMAGE AND SOUND F.2 F.2.1 235 Image and Sound Scientific production Publications Peer-reviewed journals (international) [RI1] E. Abraham, A. Younus, C. Aguerre, P. Desbarats, and P. Mounaix, Refraction losses in terahertz computed tomography, Optics Communications, 283 (2010), pp. 2050–2055. [RI2] J. Allali, P. Ferraro, P. Hanna, C. Iliopoulos, and M. Robine, Toward a general framework for polyphonic comparison, Fundamenta Informaticae, 97 (2009), pp. 331–346. [RI3] L. Ammann, P. Barla, X. Granier, G. Guennebaud, and P. Reuter, Surface relief analysis for illustrative shading, Computer Graphics Forum, 31 (2012), pp. 1481–1490. [RI4] P. Barla, R. Vergne, and R. Fleming, Decomposing intensity gradients into information about shape and material, Journal of Vision, 13 (2013). [RI5] Y. Baoguang, J. Feng, G. Guennebaud, and X. Liu, Packet-based hierarchal soft shadow mapping, Computer Graphics Forum, 28 (2009), pp. 1121–1130. [RI6] W. Baxter, P. Barla, and K.-I. Anjyo, Compatible embedding for 2d shape animation, IEEE Transactions on Visualization and Computer Graphics, 15 (2009), pp. 867–879. [RI7] W. Baxter, P. Barla, and K.-I. Anjyo, N-way morphing for 2d animation, Computer Animation and Virtual Worlds, 20 (2009). [RI8] F. Berthaut, M. Desainte-Catherine, and M. Hachet, Interacting with 3d reactive widgets for musical performance, Journal of New Music Research, 40 (2011), pp. 253–263. [RI9] J. Blanco-Rivero, M.-A. Aller, J. Arias, M. Ferrer, and G. Balfagón, Long-term portal hypertension increases the vasodilator response to acetylcholine in rat aorta. role of prostaglandin i2, Clinical Science, 117 (2009), pp. 365–374. [RI10] S. Boyé, P. Barla, and G. Guennebaud, A vectorial solver for free-form vector gradient, ACM Transaction on Graphics, (2012). [RI11] S. Boyé, G. Guennebaud, and C. Schlick, Least squares subdivision surfaces, Computer Graphics Forum (Proceedings of Pacific Graphics 2010), 29 (2010). [RI12] L. Bonnet, F. Lotte, and A. Lécuyer, Two brains, one game: Design and evaluation of a multi-user bci video game based on motor imagery, IEEE Transactions on Computational Intelligence and AI in games, 5 (2013), pp. 185–198. [RI13] J. Boukhobza and P. Olivier, An efficient hierarchical dual cache system for nand flash memories, International Journal of Digital Information and Wireless Communications (IJDIWC), 1 (2011), pp. 175–194. [RI14] J. Boukhobza, P. Olivier, and S. Rubini, A scalable and highly configurable cache-aware hybrid flash translation layer, Computers, 3 (2014), pp. 36–57. [RI15] N. Brodu, F. Lotte, and A. Lécuyer, Exploring two novel features for eeg-based brain-computer interfaces: Multifractal cumulants and predictive complexity, Neurocomputing, 79 (2012), pp. 87–94. [RI16] A. Bugeau, M. Bertalmio, V. Caselles, and G. Sapiro, A comprehensive framework for image inpainting, IEEE Transactions on Image Processing, (2010), pp. 2634 – 2645. 236 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI17] A. Bugeau and P. Pérez, Detection and segmentation of moving objects in complex scenes, Computer Vision and Image Understanding, (2009). [RI18] A. Bugeau, V.-T. Ta, and N. Papadakis, Variational exemplar-based image colorization, IEEE Transactions on Image Processing, (2013). [RI19] P. Bénard, A. Bousseau, and J. Thollot, State-of-the-art report on temporal coherence for stylized animations, Computer Graphics Forum, 30 (2011), pp. 2367–2386. [RI20] P. Bénard, F. Cole, M. Kass, I. Mordatch, J. Hegarty, M. S. Senn, K. Fleischer, D. Pesare, and K. Breeden, Stylizing animation by example, ACM Transactions on Graphics, 32 (2013), pp. 119:1–119:12. [RI21] P. Bénard, A. Hertzmann, and M. Kass, Computing smooth surface contours with accurate topology, ACM Transactions on Graphics, 33 (2014). [RI22] P. Bénard, A. Lagae, P. Vangorp, S. Lefebvre, G. Drettakis, and J. Thollot, A dynamic noise primitive for coherent stylization, Computer Graphics Forum, 29 (2010), pp. 1497–1506. [RI23] F. Canezin, G. Guennebaud, and L. Barthe, Adequate inner bound for geometric modeling with compact field function, Computer & Graphics (proceedings of SMI 2013), 37 (2013), pp. 565–573. [RI24] J. Chen, G. Guennebaud, P. Barla, and X. Granier, Non-oriented mls gradient fields, Computer Graphics Forum, (2013). [RI25] S. J.-S. Chen, I. Reinertsen, P. Coupé, C. X. B. Yan, L. Mercier, D. R. Del Maestro, and D. L. Collins, Validation of a hybrid doppler ultrasound vessel-based registration algorithm for neurosurgery., International Journal of Computer Assisted Radiology and Surgery, 7 (2012), pp. 667– 85. [RI26] P. Coupé, S. Eskildsen, J. Manjon, V. Fonov, J. Pruessner, M. Allard, and L. Collins, Scoring by nonlocal image patch estimator for early detection of alzheimer’s disease, Neuroimage: Clinical, 1 (2012), pp. 141–152. [RI27] P. Coupé, S. F. Eskildsen, J. V. Manjón, V. Fonov, and D. L. Collins, Simultaneous segmentation and grading of hippocampus for patient classification with alzheimer’s disease., Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 14 (2011), pp. 149–57. [RI28] P. Coupé, S. F. Eskildsen, J. V. Manjón, V. Fonov, and D. L. Collins, Simultaneous segmentation and grading of anatomical structures for patient’s classification: application to alzheimer’s disease., NeuroImage, 59 (2012), pp. 3736–47. [RI29] P. Coupé, P. Hellier, C. Kervrann, and C. Barillot, Nonlocal means-based speckle filtering for ultrasound images., IEEE Transactions on Image Processing, 18 (2009), pp. 2221–9. [RI30] P. Coupé, P. Hellier, X. Morandi, and C. Barillot, 3d rigid registration of intraoperative ultrasound and preoperative mr brain images based on hyperechogenic structures, International Journal of Biomedical Imaging, (2011), p. 53131. [RI31] P. Coupé, J. V. Manjon, E. Gedamu, D. Arnold, M. Robles, and L. Collins, An objectbased method for rician noise estimation in mr images., Medical image computing and computerassisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 12 (2009), pp. 601–8. [RI32] P. Coupé, J. Manjón, V. Fonov, J. Pruessner, M. Robles, and D. L. Collins, Patch-based segmentation using expert priors: Application to hippocampus and ventricle segmentation., NeuroImage, 54 (2011), pp. 940–954. F.2. IMAGE AND SOUND 237 [RI33] P. Coupé, J. Manjón, E. Gedamu, D. Arnold, M. Robles, and D. L. Collins, Robust rician noise estimation for mr images., Medical Image Analysis, 14 (2010), pp. 483–93. [RI34] P. Coupé, J. Manjón, M. Robles, and L. Collins, Adaptive multiresolution non-local means filter for 3d mr image denoising, IET Image Processing, (2011). [RI35] P. Coupé, J. V. Manjón, M. Chamberland, M. Descoteaux, and B. Hiba, Collaborative patch-based super-resolution for diffusion-weighted images., NeuroImage, (2013). [RI36] P. Coupé, M. Munz, J. V. Manjón, E. S. Ruthazer, and D. Louis Collins, A candle for a deeper in vivo insight., Med Image Anal, 16 (2012), pp. 849–64. [RI37] A. Cohé and M. Hachet, Beyond the mouse: Understanding user gestures for manipulating 3d objects from touchscreen inputs, Computers and Graphics, (2012). [RI38] E. Darles, B. Crespin, D. Ghazanfarpour, and J.-C. Gonzato, A survey of ocean simulation and rendering techniques in computer graphics, Computer Graphics Forum, 30 (2011), pp. 43–60. [RI39] B. De Araujo, G. Casiez, J. Jorge, and M. Hachet, Mockup builder: 3d modeling on and above the surface, computer & graphics, 37 (2013), pp. 165–178. [RI40] W. B. De Haas, M. Robine, P. Hanna, R. Veltkamp, and F. Wiering, Comparing approaches to the similarity of musical chord sequences, Lecture Notes in Computer Science – Exploring Music Content, 6684 (2011), pp. 242–258. [RI41] S. Eskildsen, P. Coupé, V. Fonov, J. Manjón, K. Leung, N. Guizard, S. Wassef, L. R. Ostergaard, and D. L. Collins, Beast: brain extraction based on nonlocal segmentation technique., NeuroImage, 59 (2012), pp. 2362–73. [RI42] S. Eskildsen, P. Coupé, D. García-Lorenzo, V. Fonov, J. C. Pruessner, and D. L. Collins, Prediction of alzheimer’s disease in subjects with mild cognitive impairment from the adni cohort using patterns of cortical thinning., NeuroImage, (2012). [RI43] D. Fourer and S. Marchand, Informed spectral analysis: audio signal parameters estimation using side information, EURASIP Journal on Advances in Signal Processing, Informed Acoustic Source Separation (2013), p. 2013:178. [RI44] A. Fornés, V. C. Kieu, M. Visani, N. Journet, and D. Anjan, The icdar/grec 2013 music scores competition: Staff removal, Lecture notes in computer science, (2014), pp. 1–16. [RI45] F.-X. Féron, Les variations dans la vibration: vibratos, trémolos et trilles dans la trilogie - les trois stades de l’homme (1956-1965) pour violoncelle seul de giacinto scelsi, Filigrane, (2012). [RI46] K. Gerdes, L. Clémént, and R. Marlet, A grammar correction algorithm, Lecture notes in computer science, 5591 (2011), pp. 47–63. [RI47] S. Gorlow and S. Marchand, Informed audio source separation using linearly constrained spatial filters, IEEE Transactions on Audio, Speech and Language Processing, 21 (2013), pp. 3–13. [RI48] S. Gorlow and J. Reiss, Model-based inversion of dynamic range compression, IEEE Transactions on Audio, Speech and Language Processing, 21 (2013), pp. 1434–1444. [RI49] J. P. Guillet, B. Recur, L. Frederique, B. Bousquet, L. Canioni, I. Manek-Hönninger, P. Desbarats, and P. Mounaix, Review of terahertz tomography techniques, Journal of Infrared, Millimeter, and Terahertz Waves, 35 (2014), pp. 382–411. [RI50] M. Hachet, J.-B. De La Rivière, J. Laviole, A. Cohé, and S. Cursan, Touch-based interfaces for interacting with 3d content in public exhibitions, IEEE Computer Graphics and Applications, 33 (2013), pp. 80–85. 238 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI51] C. Haegelen, P. Coupé, V. Fonov, N. Guizard, P. Jannin, X. Morandi, and D. L. Collins, Automated segmentation of basal ganglia and deep brain structures in mri of parkinson’s disease, International Journal of Computer Assisted Radiology and Surgery, 8 (2013), pp. 99–110. [RI52] P. Hellier, P. Coupé, X. Morandi, and D. L. Collins, An automatic geometrical and statistical method to detect acoustic shadows in intraoperative ultrasound brain images, Medical Image Analysis, 14 (2010), pp. 195–204. [RI53] S. Hu, P. Coupé, J. Pruessner, and L. Collins, Appearance-based modeling for segmentation of hippocampus and amygdala using multi-contrast mr imaging., NeuroImage, 58 (2011), pp. 549–59. [RI54] S. Hu, P. Coupé, J. C. Pruessner, and D. L. Collins, Nonlocal regularization for active appearance model: Application to medial temporal lobe segmentation., Human Brain Mapping, (2012). [RI55] S. Hu, J. C. Pruessner, P. Coupé, and D. L. Collins, Volumetric analysis of medial temporal lobe structures in brain development from childhood to adolescence., NeuroImage, 74C (2013), pp. 276– 287. [RI56] J. E. Huggins, C. Guger, B. Allison, C. W. Anderson, A. Batista, A.-M. Brouwer, C. Brunner, R. Chavarriaga, M. Fried-Oken, A. Gunduz, D. Gupta, A. Kübler, R. Leeb, F. Lotte, L. E. Miller, G. Muller-Putz, T. Rutkowski, M. Tangermann, and D. E. Thompson, Workshops of the fifth international brain-computer interface meeting: Defining the future, Brain-Computer Interfaces, 1 (2014), pp. 27–49. [RI57] O. Hugues, J.-M. Cieutat, and P. Guitton, Real-time infinite horizon tracking with data fusion for augmented reality in a maritime operations context., Springer Virtual Reality, 17 (2013), p. 10. [RI58] C. Kaes and H. Nicolas, Compressed domain indexing of scalable h.264/svc streams, Signal Processing Image Communication, 24, special issue: Scalable coded media beyond compression (2009), pp. 484–498. [RI59] C. Kaes and H. Nicolas, Efficient video copy detection: Sequence matching in the h.264 compressed domain, Journal of Communication and Computer, Vol. 8 (2011). [RI60] S. Karaman, J. Benois-Pineau, V. Dovgalecs, R. Mégret, J. Pinquier, R. AndréObrecht, Y. Gaëstel, and J.-F. Dartigues, Hierarchical hidden markov model in detecting activities of daily living in wearable videos for studies of dementia, Multimedia Tools and Applications, 69 (2014), pp. 743–771. [RI61] P. Krämer, J. Benois-Pineau, and J.-P. Domenger, Local object-based super-resolution mosaicing from low-resolution video, Signal Processing, 91 (2011), pp. 1771–1780. [RI62] S. Li, G. Guennebaud, B. Yang, and J. Feng, Predicted virtual soft shadow maps with high quality filtering, Computer Graphics Forum, 30 (2011). [RI63] Y. Liu and X. Granier, Online tracking of outdoor lighting variations for augmented reality with moving cameras, IEEE Transactions on Visualization and Computer Graphics, 18 (2012), pp. 573–580. [RI64] F. Lotte, Les interfaces cerveau-ordinateur: Conception et utilisation en réalité virtuelle, Revue Technique et Science Informatiques, 31 (2012), pp. 289–310. [RI65] F. Lotte and C. Guan, Regularizing common spatial patterns to improve bci designs: Unified theory and new algorithms, IEEE Transactions on Biomedical Engineering, 58 (2011), pp. 355–362. [RI66] F. Lotte, F. Larrue, and C. Mühl, Flaws in current human training protocols for spontaneous brain-computer interfaces: lessons learned from instructional design, Frontiers in Human Neurosciences, 7 (2013). F.2. IMAGE AND SOUND 239 [RI67] F. Lotte, A. Lécuyer, and B. Arnaldi, Furia: An inverse solution based feature extraction algorithm using fuzzy set theory for brain-computer interfaces, IEEE Transactions on Signal Processing, 57 (2009), pp. 3253–3263. [RI68] F. Lotte, A. Van Langhenhove, F. Lamarche, T. Ernest, Y. Renard, B. Arnaldi, and A. Lécuyer, Exploring large virtual environments by thoughts using a brain-computer interface based on motor imagery and high-level commands, Presence: Teleoperators and Virtual Environments / Presence Teleoperators and Virtual Environments, 19 (2010), pp. 54–70. [RI69] H. Lu, R. Pacanowski, and X. Granier, Second-order approximation for variance reduction in multiple importance sampling, Computer Graphics Forum, 32 (2013), pp. 131–136. [RI70] S. Marchand, B. Mansencal, and L. Girin, Interactive music with active audio cds, Lecture notes in computer science, 6684 (2011), pp. 31–50. [RI71] J. Manjón, P. Coupé, A. Buades, V. Fonov, D. Louis Collins, and M. Robles, Non-local mri upsampling., Medical Image Analysis, 14 (2010), pp. 784–92. [RI72] J. Manjón, P. Coupé, A. Buades, D. Louis Collins, and M. Robles, New methods for mri denoising based on sparseness and self-similarity., Medical Image Analysis, 16 (2012), pp. 18–27. [RI73] J. Manjón, P. Coupé, L. Concha, A. Buades, L. Collins, and R. Montserrat, Diffusion weighted image denoising using overcomplete local pca, PlosOne, 8 (2013). [RI74] J. Manjón, P. Coupé, L. Martí-Bonmatí, D. L. Collins, and M. Robles, Adaptive non-local means denoising of mr images with spatially varying noise levels., Journal of Magnetic Resonance Imaging, 31 (2010), pp. 192–203. [RI75] J. V. Manjón, P. Coupé, A. Buades, D. L. Collins, and M. Robles, Mri superresolution using self-similarity and image priors., International Journal of Biomedical Imaging, 2010 (2010), p. 425891. [RI76] N. Mellado, P. Barla, G. Guennebaud, P. Reuter, and C. Schlick, Growing least squares for the continuous analysis of manifolds in scale-space, Computer Graphics Forum, (2012). [RI77] C. Merlo and N. Couture, A user-centered approach for a tabletop-based collaborative design environment, Strojniški vestnik - Journal of Mechanical Engineering, 56 (2010), pp. 754–764. [RI78] C. Morand, J. Benois-Pineau, J.-P. Domenger, J. Zepeda, E. Kijak, and C. Guillemot, Scalable object-based video retrieval in hd video databases, Eurasip Journal on Signal Processing: Image Communication, accepted (2010). [RI79] C. Mühl, C. Jeunet, and F. Lotte, Eeg-based workload estimation across affective contexts, Frontiers in Neurosciences section Neuroprosthetics, 8 (2014). [RI80] H. Nicolas, M. Koubàa, and C. Ben Amar, Collusion, mpeg-4 compression and frame dropping resistant video watermarking, MULTIMEDIA TOOLS AND APPLICATIONS journal, Special issue on Intelligent Interactive Multimedia Systems and Services (2011). [RI81] P. Olivier and J. Boukhobza, A hardware time manager implementation for the xenomai realtime kernel of embedded linux, ACM SIGBED Review 9(2) 38-42, 9 (2012), pp. 38–42. [RI82] P. Olivier and J. Boukhobza, Un système de cache hiérarchique pour les e/s présentant des motifs séquentiels pour les mémoires flash nand, Technique et Science Informatiques (TSI), 32 (2013), pp. 203–228. [RI83] P. Olivier, J. Boukhobza, and E. Senn, On benchmarking embedded linux flash file systems, ACM SIGBED Review 9(2) 43-47, 9 (2012), pp. 43–47. [RI84] P. Olivier, J. Boukhobza, and E. Senn, Flashmon v2: monitoring raw nand flash memory i/o requests on embedded linux, ACM SIGBED Review - Special Issue on the 3rd Embedded Operating System Workshop (EWiLi 2013), 11 (2014), pp. 38–43. 240 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI85] A. Orzan, A. Bousseau, P. Barla, H. Winnemöller, J. Thollot, and D. Salesin, Diffusion curves: A vector representation for smooth-shaded images, Communications of the ACM, 56 (2013), pp. 101–108. [RI86] C. Oztireli, G. Guennebaud, and M. Gross, Feature preserving point set surfaces based on non-linear kernel regression, Computer Graphics Forum, 28 (2009), pp. 493–501. [RI87] R. Pacanowski, X. Granier, C. Schlick, and P. Pierre, Volumetric vector-based representation for indirect illumination caching, Journal of Computer Science and Technology (JCST), 25 (2010), pp. 925–932. [RI88] R. Pacanowski, O. Salazar-Celis, C. Schlick, X. Granier, P. Pierre, and C. Annie, Rational brdf, IEEE Transactions on Visualization and Computer Graphics, 18 (2012), pp. 1824–1835. [RI89] F. Palhano Xavier De Fontes, G. Andrade Barroso, P. Coupé, and P. Hellier, Real time ultrasound image denoising, Journal of Real-Time Image Processing, (2010). [RI90] O. Palie, P. Michel, J. F. Menard, C. Rousseau, E. Rio, M.-E. Meyer, K. Jalali, S. Bardet, C. M. M’Vondo, P. Olivier, G. Faure, E. Itti, C. Diana, C. Houzard, F. Mornex, F. Di Fiore, and P. Vera, The predictive value of treatment response using fdg-pet performed at day 21 of chemo-radiotherapy in patients with oesophageal squamous cell carcinoma. a prospective, multicentre study (rtep3)., European Journal of Nuclear Medicine and Molecular Imaging, 40 (2013), pp. 1345–55. [RI91] N. Papadakis, A. Baeza, A. Bugeau, P. Gargallo I Piracés, O. D’Hondt, V. Caselles, X. Armangué, I. Rius, and S. Sagàs, Virtual camera synthesis for soccer game replays, Journal of Virtual Reality and Broadcasting, 9(2012) (2013). [RI92] N. Papadakis and A. Bugeau, Tracking with occlusions via graph cuts, IEEE Transactions on Pattern Analysis and Machine Intelligence, 33 (2011), pp. 144–157. [RI93] N. Papadakis, A. Bugeau, and V. Caselles, Image editing with spatiogram transfer, IEEE Transactions on Image Processing, 21 (2012), pp. 2513 – 2522. [RI94] F. Pierre, J.-F. Aujol, A. Bugeau, N. Papadakis, and V.-T. Ta, Exemplar-based colorization in rgb color space, Internationnal Conference on Image Processing, (2014). [RI95] V. Rabeux, N. Journet, A. Vialard, and J.-P. Domenger, Quality evaluation of degraded document images for binarization result prediction, International Journal on Document Analysis and Recognition (IJDAR), (2013), pp. 1–13. [RI96] B. Raymond, G. Guennebaud, P. Barla, R. Pacanowski, and X. Granier, Optimizing brdf orientations for the manipulation of anisotropic highlights, Computer Graphics Forum, (2014). [RI97] P. Reuter, G. Riviere, N. Couture, S. Mahut, and L. Espinasse, Archeotui - driving virtual reassemblies with tangible 3d interaction, Journal on Computing and Cultural Heritage (JOCCH 2010), 3 (2010), pp. 1–13. [RI98] B. Recur, P. Desbarats, and J.-P. Domenger, Noise robust mojette reconstructions for missing wedge effect attenuation, Journal of Multimedia Processing and Technologies, 1 (2010), pp. 208–227. [RI99] B. Recur, J. P. Guillet, L. Bassel, C. Fragnol, I. Manek-Hönninger, J.-C. Delagnes, W. Benharbone, P. Desbarats, J.-P. Domenger, and P. Mounaix, Terahertz radiation for tomographic inspection, Optical Engineering, 51 (2012), pp. 091609–1 – 091609–7. [RI100] B. Recur, J.-P. Guillet, I. Manek-Hönninger, J.-C. Delagnes, W. Benharbone, P. Desbarats, J.-P. Domenger, L. Canioni, and P. Mounaix, Propagation beam consideration for 3d thz computed tomography, Optics Express, 20 (2012), pp. 5817–5829. F.2. IMAGE AND SOUND 241 [RI101] B. Recur, A. Younus, S. Salort, P. Mounaix, B. Chassagne, P. Desbarats, J.-P. Caumes, and E. Abraham, Investigation on reconstruction methods applied to 3d terahertz computed tomography, Optics Express, 19 (2011), pp. 5105–5117. [RI102] Y. Renard, F. Lotte, G. Gibert, M. Congedo, E. Maby, V. Delannoy, O. Bertrand, and A. Lécuyer, Openvibe: An open-source software platform to design, test and use brain-computer interfaces in real and virtual environments, Presence: Teleoperators and Virtual Environments / Presence Teleoperators and Virtual Environments, 19 (2010), pp. 35–53. [RI103] B. Ridel, P. Reuter, J. Laviole, N. Mellado, N. Couture, and X. Granier, The revealing flashlight: Interactive spatial augmented reality for detail exploration of cultural heritage artifacts, Journal on Computing and Cultural Heritage, (2014). [RI104] G. Riviere, N. Couture, and F. Jurado, Tangible user interfaces for geosciences, SEG Technical Program Expanded Abstracts, 28 (2009), pp. 1137–1141. [RI105] G. Riviere, N. Couture, and P. Reuter, The activation of modality in virtual objects assembly, Journal on Multimodal User Interfaces (JMUI 2010), 3 (2010), pp. 189–196. [RI106] S. Roujol, J. Benois-Pineau, B. De Senneville, M. Ries, B. Quesson, and C. Moonen, Robust real time constrained estimation of respiratory motion interventional mri on mobile organs, IEEE Transactions on Information Technology in Biomedicine, 16 (2012), pp. 365 – 374. [RI107] V. Roullier, O. Lezoray, V.-T. Ta, and A. Elmoataz, Multi-resolution graph-based analysis of histopathological whole slide images: application to mitotic cell extraction and visualization, Computerized Medical Imaging and Graphics, 35 (2011), pp. 603–615. [RI108] H. Sauzéon, P. Arvind Pala, F. Larrue, G. Wallet, M. Déjos, X. Zheng, P. Guitton, and B. N’Kaoua, The use of virtual reality for episodic memory assessment: effects of active navigation., Experimental Psychology, 59 (2011), pp. 99–108. [RI109] R. Sicre and H. Nicolas, Shopping behaviour analysis in videos, International Journal on Graphics, Vision and Image Processing, 09 (2009), pp. 27–35. [RI110] C. Sutour, C. Deledalle, and J.-F. Aujol, Adaptive regularization of the nl-means: Application to image and video denoising, IEEE Transactions on Image Processing, (2014). [RI111] C. Sutour, C.-A. Deledalle, and J.-F. Aujol, Adaptive regularization of the nl-means : Application to image and video denoising, IEEE Transactions on Image Processing, (2014). [RI112] D. Szolgay, J. Benois-Pineau, R. Mégret, Y. Gaëstel, and J.-F. Dartigues, Detection of moving foreground objects in videos with strong camera motion, Pattern Analysis and Applications, 14 (2011), pp. 311–328. [RI113] V.-T. Ta, A. Elmoataz, and O. Lezoray, Nonlocal pdes-based morphology on weighted graphs for image and data processing, IEEE Transactions on Image Processing, 26 (2011), pp. 1504–1516. [RI114] N. Takouachet, N. Couture, P. Reuter, P. Joyot, G. Riviere, and N. Verdon, Tangible user interfaces for physically-based deformation: design principles and first prototype, The Visual Computer, Volume 28 (2012), pp. 799–808. [RI115] S. Thureau, P. Chaumet Riffaud, R. Modzelewski, P. Fernandez, L. Tessonnier, L. Vervueren, F. Cachin, A. Berriolo-Riedinger, P. Olivier, H. Kolesnikov-Gauthier, O. Blagosklonov, B. Bridji, A. Devillers, L. Collombier, F. Courbon, E. Gremillet, C. Houzard, J.-M. Caignon, J. Roux, N. Aide, I. Brenot-Rossi, K. Doyeux, B. Dubray, and P. Vera, Interobserver agreement of qualitative analysis and tumor delineation of fmiso and flt pet-images in lung cancer., Journal of Nuclear Medicine, 54 (2013), pp. 1543–50. 242 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI116] T. Tong, R. Wolz, P. Coupé, J. V. Hajnal, and D. Rueckert, Segmentation of mr images via discriminative dictionary learning and sparse coding: Application to hippocampus labeling., NeuroImage, (2013). [RI117] R. Vaillant, L. Barthe, G. Guennebaud, M.-P. Cani, D. Rohmer, B. Wyvill, O. Gourmel, and M. Paulin, Implicit skinning: Real-time skin deformation with contact modeling, ACM Transactions on Graphics, 32 (2013). [RI118] J. B. Van Erp, F. Lotte, and M. Tangermann, Brain-computer interfaces: Beyond medical applications, Computer -IEEE Computer Society-, 45 (2012), pp. 26–34. [RI119] R. Vergne, P. Barla, R. Fleming, and X. Granier, Surface flows for image-based shading design, ACM Transactions on Graphics, 31 (2012), pp. 94:1–94:9. [RI120] R. Vergne, R. Pacanowski, P. Barla, X. Granier, and C. Schlick, Light warping for enhanced surface depiction, ACM Transaction on Graphics (Proceedings of SIGGRAPH 2009), 28 (2009). [RI121] R. Vergne, R. Pacanowski, P. Barla, X. Granier, and C. Schlick, Improving shape depiction under arbitrary rendering, IEEE Transactions on Visualization and Computer Graphics, 17 (2011), pp. 1071 – 1081. [RI122] R. Vergne, D. Vanderhaeghe, J. Chen, P. Barla, X. Granier, and C. Schlick, Implicit brushes for stylized line-based rendering, Computer Graphics Forum, 30 (2011), pp. 513–522. [RI123] R. Vieux, J. Benois-Pineau, J.-P. Domenger, and A. Braquelaire, Segmentation-based multi-class semantic object detection, Multimedia Tools and Applications, (2011), pp. 1 – 22. [RI124] F. Vincent, L. Barthe, G. Guennebaud, and M. Paulin, Soft textured shadow volume, Computer Graphics Forum, 28 (2009), pp. 1111–1120. [RI125] M. Wolff, N. Couture, R. Mollard, and A. Clay, Développement d’une plateforme d’évaluation personnalisable et adaptable pour l’étude du comportement émotionnel en situation de multisollicitations., Travail humain, 75 (2012), pp. 253–277. [RI126] A. Younus, P. Desbarats, S. Bosio, E. Abraham, J.-C. Delagnes, and P. Mounaix, Terahertz dielectric characterisation of photopolymer resin used for fabrication of 3d thz imaging phantoms, Electronic Letters, 45 (2009), pp. 702–703. Peer-reviewed journals (national) [RN1] O. Augereau, N. Journet, and J.-P. Domenger, Reconnaissance et extraction de documents. une application industrielle à la détection de documents semi-structurés, Document numérique, 16 (2013), pp. 91–118. [RN2] L. Clément, Zeugme sémantique, Revue de Sémantique et de Pragmatique, (2010), pp. 231–247. [RN3] M. Desainte-Catherine, P. Hanna, M. Robine, and J.-L. Rouas, Labri. modélisation du son, de la parole et de la musique, Revue des Sciences et Technologies de l’Information, 32 (2013), pp. 515–518. [RN4] R. Synave, S. Gueorguieva, and P. Desbarats, Calcul du chemin géodésique linéaire sur des maillages triangulaires, Revue Electronique Francophone d’Informatique Graphique, 5 (2011), pp. 1–15. [RN5] R. Vaillant, L. Barthe, G. Guennebaud, M.-P. Cani, D. Rohmer, and B. Wyvill, Déformation de la peau d’un personnage avec prise en compte des contacts, Revue Electronique Francophone d’Informatique Graphique, 6 (2012), pp. 37–49. Contributed volumes (international) [OI1] J. Benois-Pineau, F. Precioso, and M. Cord, Visual Indexing and Retrieval, Springer, 2012. BIBLIOGRAPHY 243 [OI2] P. Fuchs, G. Moreau, and P. Guitton, Virtual Reality: Concepts and Technologies, Editor " CRC Press ", 2011. [OI3] B. Ionescu, J. Benois-Pineau, T. Piatrik, and G. Quénot, Fusion in Computer Vision: Understanding Complex Visual Content, Springer international publishing, 2014. Contributed volumes (national) [ON1] H. Coqueugniot, P. Desbarats, and B. Dutailly, Anthropologie - du virtuel au réel : l’impression 3D., Editions Confluences, 2010. [ON2] H. Coqueugniot and B. Dutailly, Anthropologie - Imagerie médicale et 3D., Editions Confluences, 2010. Chapters in contributed volumes (international) [CHI1] J. Allali, P. Ferraro, P. Hanna, and M. Robine, Polyphonic alignment algorithms for symbolic music retrieval, in Auditory Display, S. Ystad, M. Aramaki, R. Kronland-Martinet, and K. Jensen, eds., Springer Verlag Berlin, 2010, pp. 466–482. [CHI2] P. Barla and A. Bousseau, Gradient art: Creation and vectorization, in Image and Video based Artistic Stylization, P. R. John Colomosse, ed., Springer, 2012. [CHI3] J. Benois-Pineau, S. Anthoine, C. Morand, J.-P. Domenger, E. Debreuve, W. Bel Haj Ali, and P. Piro, Scalable indexing of hd video, in High-Quality Visual Experience, M. K. M. Mrak, Marta; Grgic, ed., Springer, 2010, pp. 497–524. [CHI4] J. Benois-Pineau and B. Augereau, Motion estimation in color image sequences, in Digital Color Imaging, L. M. Christine Fernandez-Maloigne, Frederic Robert-Ignacio, ed., Willey, 2012, p. 368. [CHI5] J. Benois-Pineau, A. Bugeau, S. Karaman, and R. Mégret, Spatial and multi-resolution context in visual indexing, in Visual Indexing and Retrieval, Springer, ed., Springer, 2012. [CHI6] J. Benois-Pineau, B. Lovell, and R. Andrews, Motion estimation in colour image sequences, in Advanced Color Image Processing and Analysis, C. Fernandez-Maloigne, ed., Springer, 2013, pp. 377 – 395. [CHI7] H. Boujut, A. Bugeau, and J. Benois-Pineau, Visual search for objects in a complex visual context: what we wish to see, in Semantic Multimedia Analysis and Processing, P. M. Evaggelos Spyrou, Dimitris Iakovidis, ed., CRC Press, 2014. [CHI8] P. Bénard, J. Thollot, and J. Collomosse, Temporally coherent video stylization, in Image and Video-based Artistic Stylisation, P. Rosin and J. Collomosse, eds., vol. 42, Springer, 2012, pp. 257–284. [CHI9] A. Clay, E. Delord, N. Couture, and G. Domenger, Augmenting a ballet dance show using the dancer’s emotion: Conducting joint research in dance and computer science, in Arts and Technology, Springer Berlin Heidelberg, 2010, pp. 148–156. [CHI10] N. Couture, G. Riviere, and P. Reuter, Tangible interaction in mixed reality systems, in MIXER - The Engineering of Mixed Reality Systems, G. P. Dubois E. and N. L., eds., Springer-Verlag, 2010, pp. 101–120. [CHI11] A. Elmoataz, O. Lezoray, V.-T. Ta, and S. Bougleux, Partial difference equations on graphs for local and nonlocal image processing, in Image Processing and Analysis with Graphs: Theory and Practice, O. Lézoray and L. Grady, eds., CRC Press / Taylor & Francis, 2012. [CHI12] P. Ferraro, M. Robine, J. Allali, P. Hanna, and R. Thomas, Detection of near-duplicate musical documents from a multi-level comparison of tonal information, in Information Extraction from the Internet, iconcept press, 2011, pp. 129–143. 244 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CHI13] G. Gagneré, R. Ronfard, and M. Desainte-Catherine, La simulation du travail théâtral et sa " notation " informatique, in Notation du travail théâtral, du manuscript au numérique, M. Martinez, S. Proust, and M. Pouget, eds., Lansman, 2012. [CHI14] O. Hugues, J.-M. Cieutat, and P. Guitton, Gis and augmented reality : State of the art and issues, in Handbook of Augmented Reality, B. Furht, ed., Springer, 2011, p. 850. [CHI15] F. Lotte, J. Faller, C. Guger, Y. Renard, G. Pfurtscheller, A. Lécuyer, and R. Leeb, Combining bci with virtual reality: Towards new applications and improved bci, in Towards Practical Brain-Computer Interfaces:, B. Z. Allison, S. Dunne, R. Leeb, J. D. R. Millán, and A. Nijholt, eds., Springer, 2013. [CHI16] P. Olivier, J. Boukhobza, and E. Senn, Flash based storage in embedded systems, in Embedded Computing Systems: Applications, Optimization, and Advanced Design, IGI Global, 2013. [CHI17] M. Toro, A. Allombert, and M. Desainte-Catherine, Modeling temporal constraints for a system of interactive scores, in Constraint Programming in Music, Wiley, 2011, pp. 1–23. [CHI18] Y. Zhou, J. Benois-Pineau, and H. Nicolas, A multi-resolution particle filter tracking with a dual consistency check for model update in a multi-camera environment, in Analysis, Retrieval and Delivery of Multimedia Contents, Springer, ed., -, 2011. Editors of contributed volumes (international) [DI1] D. Coyle, J. Principe, F. Lotte, and A. Nijholt, Guest Editorial: Brain/Neuronal-Computer Game Interfaces and Interaction, IEEE, 2013. [DI2] M. Hachet and M. Dellepiane, "Interacting with the past" - Special Issue of Journal on Computing and Cultural Heritage, vol. 7, ACM, 2014. [DI3] M. Hachet, K. Kiyokawa, and J. Laviola, Proceedings of 3DUI 2010 - IEEE Symposium on 3D User Interfaces, IEEE, 2010. [DI4] M. Hachet and E. Kruijff, IEEE Transactions on Visualization and Computer Graphics (vol. 16, no. 1), Jan/Feb 2010. Guest Editor’s: Special Section on the ACM Symposium on Virtual Reality Software and Technology, IEEE, 2010. [DI5] J. Laviola, M. Hachet, and M. Billinghurst, Proceedings of 3DUI 2011, IEEE Symposium on 3D User Interfaces, IEEE, 2011. Editors of contributed volumes (national) [DN1] F. Lambert, C. Bassac, and L. Clément, Revue de Sémantique et de Pragmatique numéro 24, Presses Universitaires d’Orléans, 2010. Invited conference talks (international) [II1] E. Baldisser, J.-M. Cieutat, and P. Guitton, Apports de la réalité augmentée à la gestion de réseaux et de mobiliers urbains, in 8èmes journées de l’Association Française de Réalité Virtuelle, Augmentée, Mixte et d’Intéraction 3D, 2013. [II2] J. Benois-Pineau, Indexing of compressed video: Methods, challenges, applications, in Image Processing Theory Tools and Applications (IPTA), 2010 2nd International Conference on, IEEE, 2010, pp. 3–4. [II3] V. C. Kieu, J.-P. Domenger, R. Mullot, N. Journet, and M. Visani, A character degradation model for grayscale ancient document images, in 21st International Conference on Pattern Recognition (ICPR), 2012. BIBLIOGRAPHY 245 [II4] V. C. Kieu, A. Fornés, M. Visani, N. Journet, and D. Anjan, The icdar/grec 2013 music scores competition on staff removal, in 10th IAPR International Workshop on Graphics Recognition, 2013. [II5] V. C. Kieu, N. Journet, M. Visani, R. Mullot, and J.-P. Domenger, Semi-synthetic document image generation using texture mapping on scanned 3d document shapes, in The Twelfth International Conference on Document Analysis and Recognition, 2013. [II6] V. C. Kieu, M. Maroua, V. Rabeux, N. Journet, and M. Visani, Génération d’images semisynthétiques de documents anciens à des fins d’évaluation de performances et d’apprentissage, in Colloque International Francophone sur l’Écrit et le Document 2014 (CIFED), 2014. [II7] V. C. Kieu, M. Visani, N. Journet, R. Mullot, and J.-P. Domenger, An efficient parametrization of character degradation model for semi-synthetic image generation, in 2nd International Workshop on Historical Document Imaging and Processing, 2013. [II8] M. Visani, V. C. Kieu, A. Fornés, and N. Journet, The icdar 2013 music scores competition: Staff removal, in The Twelfth International Conference on Document Analysis and Recognition, 2013. [II9] Y. Zhou, J. Benois-Pineau, and H. Nicolas, Multi-object particle filter tracking with automatic event analysis, in First ACM ARTEMIS2010 International Workshop on Analysis and Retrieval of Tracked Events and Motion in Imagery Streams, 2010. [II10] Y. Zhou, J. Benois-Pineau, and H. Nicolas, A multi-resolution particle filter tracking with a dual consistency check for model update in a multi-camera environment, in 11th International Workshop on Image Analysis for Multimedia Interactive Services, 2010. [II11] Y. Zhou, B. Mansencal, and J. Benois-Pineau, A multi-object particle filter tracking with a dual consistency check: Application to mid-level concept detection in videos, in 8th International Workshop on Content-Based Multimedia Indexing, 2010. Invited conference talks (national) [IN1] A. Clay, G. Domenger, and N. Couture, Conférence dansée : recherche conjointe en art et science, in Séminaires pédagogiques de l’IUFM de Bordeaux : Conférence Dansée, recherche conjointe en art et science, 2011. [IN2] N. Mellado, P. Reuter, and F. Berthaut, Analyse de l’influence des systèmes de visualisation immersif sur l’assemblage virtuel de fragments en archéologie, in AFRV 2009 - 4ème Journées de l’Association Française de Réalité Virtuelle, 2009. [IN3] N. Mellado, P. Reuter, and C. Schlick, Assemblage d’objets 3d semi-automatique basé géométrie en archéologie, in Actes des 22èmes Journées de l’Association Française d’Informatique Graphique (AFIG), 2009. [IN4] Y. Ren, Bag-of-bags of words : Irregular graph pyramids vs spatial pyramid matching for image retrieval, in École Jeunes Chercheurs en Informatique Mathématique 2014, 2014. Conferences with published proceedings (international) [CI1] J. Aceituno, J. Castet, M. Desainte-Catherine, and M. Hachet, Improvised interfaces for real-time musical applications, in Tangible, embedded and embodied interaction (TEI), 2012. [CI2] A. Allombert, R. Marczak, M. Desainte-Catherine, P. Baltazar, and L. Garnier, Virage : Designing an interactive intermedia sequencer from users requirements and the background, in Proceedings of the International Computer Music Conference 2010, New-York, USA, 2010, pp. 1–1. [CI3] B. Aubert-Broche, V. Fonov, D. García-Lorenzo, A. Mouiha, N. Guizard, P. Coupé, S. Eskildsen, and L. Collins, A new framework for analyzing structural volume changes of longitudinal brain mri data, in Spatio-temporal Image Analysis for Longitudinal and Time-Series Image Data, vol. 7570 of LNCS, 2012, pp. 50–62. 246 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI4] O. Augereau, N. Journet, and J.-P. Domenger, Reconnaissance et extraction de pièces d’identité, in Actes du douzième Colloque International Francophone sur l’Écrit et le Document, 2012, pp. 179–194. [CI5] O. Augereau, N. Journet, and J.-P. Domenger, Semi-structured document image matching and recognition, in Document Recognition and Retrieval XX, 2013, pp. 1–12. [CI6] O. Augereau, N. Journet, and D. Jean Philippe, Document images indexing with relevance feedback : an application to industrial context, in ICDAR, 2011, pp. 1190–1194. [CI7] F. Baldacci, A. Braquelaire, and G. Damiand, 3d topological map extraction from an oriented boundary graph, in Graph-Based Representations in Pattern Recognition, vol. 5534, 2009, pp. 283–292. [CI8] F. Baldacci, A. Braquelaire, and J.-P. Domenger, Oriented boundary graph: A framework to design and implement 3d segmentation algorithms, in 2010 20th International Conference on Pattern Recognition, 2010, 2010, pp. 1116–1119. [CI9] N. Ballas, B. Labbé, H. Le Borgne, P. Gosselin, M. Redi, B. Merialdo, R. Vieux, B. Mansencal, J. Benois-Pineau, S. Ayache, A. Hamadi, B. Safadi, T.-T.-T. Vuong, H. Dong, N. Derbas, G. Quénot, B. Gao, C. Zhu, Y. Tang, E. Dellandrea, C.-E. Bichot, L. Chen, A. Benoît, P. Lambert, and T. Strat, Irim at trecvid 2013: Semantic indexing and instance search, in Proc. TRECVID Workshop, 2013. [CI10] N. Ballas, B. Labbé, A. Shabou, H. Le Borgne, P.-H. Gosselin, M. Redi, B. Merialdo, H. Jégou, J. Delhumeau, R. Vieux, B. Mansencal, J. Benois-Pineau, S. Ayache, A. Hamadi, B. Safadi, F. Thollard, N. Derbas, G. Quenot, H. Bredin, M. Cord, B. Gao, C. Zhu, Y. Tang, E. Dellandrea, C.-E. Bichot, L. Chen, A. Benoit, P. Lambert, T. Strat, J. Razik, S. Paris, H. Glotin, T. N. Trung, D. Petrovska-Delacrétaz, G. Chollet, A. Stoian, and M. Crucianu, Irim at trecvid 2012: Semantic indexing and instance search, in Proceedings of the workshop on TREC Video Retrieval Evaluation (TRECVID), 2012, p. 12p. [CI11] L. Belcour, P. Barla, and R. Pacanowski, Alta: A brdf analysis library, in EGSR Workshop on Material Appearance Modeling, H. Rushmeier and R. Klein, eds., Eurographics, 2014. [CI12] O. Ben Ahmed, J. Benois-Pineau, M. Allard, C. Ben Amar, and G. Catheline, Alzheimer disease detection on structural mri, in Proceedings of ESMRMB 2013 Congress. 30th annual meeting, ESMRMB, 2013, p. 1p. [CI13] O. Ben Ahmed, J. Benois-Pineau, A. Chokri Ben, M. Allard, and G. Catheline, Early alzheimer disease detection by bag of visual words and hybrid fusion on structural brain mri, in Proceedings of, T. S. L. Czuni, K. Schoffmann, ed., IEEE, 2013, pp. 1 – 5. [CI14] A. Ben Hamida, M. Brulin, and H. Nicolas, Logos detection from moving vehicules, in Proceedings of VISIGRAPH/ VISAPP, 2014. [CI15] A. Ben Hamida, M. Koubaa, C. Ben Amar, and H. Nicolas, Hierarchical traceability of multimedia documents, in Proceedings of CICS, IEEE, ed., 2011. [CI16] A. Ben Hamida, M. Koubaa, C. Ben Amar, and H. Nicolas, Spatio-temporal video filtering for video surveillance applications, in Proceedings of ICME, IEEE, ed., 2013. [CI17] A. Ben Hamida, M. Koubaa, C. Ben Amar, and H. Nicolas, Video pre-analyzing and coding in the context of video surveillance applications, in Proceedings of ICME, IEEE, ed., 2013. [CI18] A. Ben Hamida, M. Koubaa, C. Ben Amar, and H. Nicolas, Toward scalable applicationoriented video surveillance systems, in Science and Information Conference 2014, 2014. [CI19] A. Ben Hamida, M. Koubaa, H. Nicolas, and C. Ben Amar, Parallelepipedic shape modeling for moving objects in video surveillance systems, in IEEE conference on Science And Information (SAI), 2014. F.2. IMAGE AND SOUND 247 [CI20] F. Berthaut, M. Desainte-Catherine, and M. Hachet, Interaction with the 3d reactive widgets for musical performance., in Proceedings of the 12th Brazilian Symposium on Computer Music, 2009. [CI21] F. Berthaut, M. Desainte-Catherine, and M. Hachet, Combining audiovisual mappings for 3d musical interaction, in Proceedings of International Computer Music Conference, 2010. [CI22] F. Berthaut, M. Desainte-Catherine, and M. Hachet, Drile: An immersive environment for hierarchical live-looping, in Proceedings of New Interface for Musical Expression 2010, 2010. [CI23] F. Berthaut, M. Hachet, and M. Desainte-Catherine, Piivert: Percussion-based interaction for immersive virtual environments, in Proceedings of the IEEE Symposium on 3D User Interfaces, 2010. [CI24] F. Berthaut, D. Janin, and M. Desainte-Catherine, libtuile : un moteur d’exécution multiéchelle de processus musicaux hiérarchisés, in Actes des Journées d’Informatique Musicale (JIM), 2013, pp. 45–50. [CI25] F. Berthaut, M. Marshall, S. Subramanian, and M. Hachet, Rouages: Revealing the mechanisms of digital musical instruments to the audience, in Proceedings of the Conference on New Interfaces for Musical Expression, 2013, p. 6 pages. [CI26] B. Bossavit, J.-B. De La RiviÈre, T. Da Luz, M. Courtois, C. Kervegant, and M. Hachet, An immersive multitouch workspace, in Siggraph 2011 Emerging Technologies, 2011. [CI27] H. Boujut, J. Benois-Pineau, T. Ahmed, O. Hadar, and P. Bonnet, A metric for no-reference video quality assessment for hd tv delivery based on saliency maps, in Multimedia and Expo (ICME), 2011 IEEE International Conference on, IEEE, 2011, pp. 1–5, 1945–7871. [CI28] H. Boujut, J. Benois-Pineau, T. Ahmed, O. Hadar, and P. Bonnet, No-reference video quality assessment of h.264 video streams based on semantic saliency maps, in Image Quality and System Performance IX, vol. 8293, 2012, pp. 8293–28. [CI29] H. Boujut, J. Benois-Pineau, O. Hadar, T. Ahmed, and P. Bonnet, Weighted-mse based on saliency map for assessing video quality of h.264 video streams, in Image Quality and System Performance VIII, vol. 7867, 2011, p. 78670X. [CI30] H. Boujut, J. Benois-Pineau, and R. Mégret, Fusion of multiple visual cues for visual saliency extraction from wearable camera settings with strong motion, in Computer Vision - ECCV 2012. Workshops and Demonstrations, A. Fusiello, V. Murino, and R. Cucchiara, eds., vol. 7585 of Lecture Notes in Computer Science, Springer Berlin / Heidelberg, 2012, pp. 436–445. [CI31] H. Boujut, V. Buso, J. Benois-Pineau, Y. Gaëstel, and J.-F. Dartigues, Visual saliency maps for studies of behavior of patients with neurodegenerative diseases: Observer’s versus actor’s points of view, in Innovation in Medecine ’2013, KES, 2013, p. 5p. [CI32] H. Boujut, V. Buso, G. Bourmaud, J. Benois-Pineau, R. Mégret, J.-P. Domenger, Y. Gaëstel, and J.-F. Dartigues, Egocentric vision it technologies for alzheimer disease assessment and studies, in Egocentric vision IT technologies for Alzheimer disease assessment and studies, 2013, pp. 1–4. [CI33] J. Boukhobza, I. Khetib, and P. Olivier, Characterization of oltp i/o workloads for dimensioning embedded write cache for flash memories: A case study, in Model and Data Engineering, vol. LNCS of LNCS, Springer, 2011, p. 97. [CI34] J. Boukhobza, I. Khetib, and P. Olivier, Flashmon : un outil de trace pour les accès à la mémoire flash nand, in Proceedings of the Embed With linux Workshop, 2011, p. 2. [CI35] J. Boukhobza and P. Olivier, C-lash: a cache system for optimizing nand flash memory performance and lifetime, in Digital Information and Communication Technologyand Its Applications, S. LNCS, ed., vol. 167 part 2 of Communications in Computer and Information Science (CCIS) Series, 2011. 248 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI36] J. Boukhobza, P. Olivier, L. Plassart, H. Ouarnoughi, and L. Bellatreche, Embedded databases on flash memories: Performance and lifetime issues, the case of sqlite, in Proceedings of Embedded Real-time Software and Systems ERTS 2014, 2014, p. 140. [CI37] J. Boukhobza, P. Olivier, and S. Rubini, A cache management strategy to replace wear leveling techniques for embedded flash memory, in Proceedings of the International Symposium on Performance Evaluation of Computer & Telecommunication Systems, S. S. of Modeling and Simulation), eds., 2011. [CI38] J. Boukhobza, P. Olivier, and S. Rubini, Cach-ftl: A cache-aware configurable hybrid flash translation layer, in Proceedings of the 21st International Euromicro Conference on Parallel, Distributed and Network-based Processing, 2013, pp. 94–101. [CI39] P. Boula De Mareüil, J.-L. Rouas, and M. Yapomo, In search of cues discriminating westafrican accents in french, in Interspeech, 2011, pp. 725–728. [CI40] N. Brodu, F. Lotte, and A. Lécuyer, Comparative study of band-power extraction techniques for motor imagery classification, in IEEE Symposium on Computational Intelligence, Cognitive Algorithms, Mind, and Brain (SSCI’2011 CCMB), IEEE, 2011, pp. 1–6. [CI41] M. Brulin, C. Kaes, H. Nicolas, and C. Maillet, Compressed domain aided analysis of traffic surveillance videos, in Proceedings of ICDSC, 2009. [CI42] M. Brulin, C. Maillet, and H. Nicolas, 1-d temporal segments analysis for traffic video surveillance, in Proceedings of VISIGRAPH/VISAPP, 2014. [CI43] M. Brulin and H. Nicolas, Scene model for video traffic analysis, in International Conference on Advanced Video and Signal-Based Surveillance, IEEE, ed., 2014. [CI44] M. Brulin, H. Nicolas, and C. Maillet, Analyse d’un trafic routier dans un contexte de vidéo surveillance., in Proceedings of SETIT, IEEE, ed., 2012. [CI45] A. Bugeau and M. Bertalmio, Combining texture synthesis and diffusion for image inpainting., in Combining Texture Synthesis and Diffusion for Image Inpainting., 2009, pp. 26–33. [CI46] A. Bugeau, P. Gargallo I Piracés, O. D’Hondt, A. Hervieu, N. Papadakis, and V. Caselles, Coherent background video inpainting through kalman smoothing along trajectories, in VMV 2010 - 15th International Workshop on Vision, Modeling, and Visualization Workshop, 2010, pp. 123–130. [CI47] A. Bugeau and V.-T. Ta, Patch-based image colorization, in Proceedings, 2012. [CI48] P. Bénard, A. Bousseau, and J. Thollot, Dynamic solid textures for real-time coherent stylization, in I3D 2009 - Symposium on Interactive 3D graphics and games, ACM, 2009, pp. 121–127. [CI49] P. Bénard, F. Cole, A. Golovinskiy, and A. Finkelstein, Self-similar texture for coherent line stylization, in NPAR 2010 - 8th International Symposium on Non-photorealistic Animation and Rendering, ACM, 2010, pp. 91–97. [CI50] P. Bénard, L. Jingwan, F. Cole, A. Finkelstein, and J. Thollot, Active strokes: Coherent line stylization for animated 3d models, in NPAR 2012 - 10th International Symposium on Non-photorealistic Animation and Rendering, P. Asente and C. Grimm, eds., ACM, 2012, pp. 37–46. [CI51] P. Bénard, A. Lagae, P. Vangorp, S. Lefebvre, G. Drettakis, and J. Thollot, Npr gabor noise for coherent stylization, in ACM SIGGRAPH 2010 Talks, ACM, 2010, p. 40. [CI52] P. Bénard, J. Thollot, and F. X. Sillion, Quality assessment of fractalized npr textures: a perceptual objective metric, in 6th Symposium on Applied Perception in Graphics and Visualization (APGV), S. N. S. B. B. Katerina Mania, Bernhard E. Riecke and C. O’Sullivan, eds., ACM Press, 2009, pp. 117–120. F.2. IMAGE AND SOUND 249 [CI53] M. Cabral, P. Vangorp, G. Chaurasia, E. Chapoulie, M. Hachet, and G. Drettakis, A multimode immersive conceptual design system for architectural modeling and lighting, in 3D User Interfaces (3DUI), 2011 IEEE Symposium on, J. J. L. Jr, M. Hachet, and M. Billinghurst, eds., IEEE, 2011, pp. 15–18. [CI54] J. Charton, S. Gueorguieva, and P. Desbarats, Sinefitting: Robust curvature estimation on surface triangulation, in PROCEEDINGS OF THE IADIS INTERNATIONAL CONFERENCE, 2013, pp. 43–50. [CI55] J. Chen, Y. Chen, X. Granier, J. Wang, and Q. Peng, Importance-driven composition of multiple rendering styles, in International CAD/Graphics, IEEE Computer Society, 2011, pp. 79–86. [CI56] J. Chen, X. Granier, N. Lin, and Q. Peng, On-line visualization of underground structures using context features, in ACM Symposium on Virtual Reality Software and Technology (VRST), 2010, pp. 167–170. [CI57] A. Clay, N. Couture, E. Decarsin, M. Desainte-Catherine, P.-H. Vulliard, and J. Larralde, Movement to emotions to music: using whole body emotional expression as an interaction for electronic music generation, in Proceedings of the 12th International Conference on New Interfaces for Musical Expression (NIME’12), 2012. [CI58] A. Clay, N. Couture, and L. Nigay, Engineering affective computing: a unifying software architecture, in Affective Computing and Intelligent Interaction (ACII 2009), 2009, pp. 1–6. [CI59] A. Clay, N. Couture, and L. Nigay, Towards emotion recognition in interactive systems: Application to a ballet dance show, in Proceedings of the ASME/AFM 2009 World Conference on Innovative Virtual Reality (WinVR2009), ASME, ed., vol. 2009, 2009. [CI60] A. Clay, N. Couture, L. Nigay, J.-B. De La Rivière, J.-C. Martin, M. Courgeon, M. Desainte-Catherine, E. Orvain, V. Girondel, and G. Domenger, Interactions and systems for augmenting a live dance performance, in Proceedings of the 11th IEEE International Symposium on Mixes and Augmented Reality (ISMAR), IEEE Computer Society, 2012. [CI61] A. Clay, M. Courgeon, N. Couture, E. Delord, C. Clavel, and J.-C. Martin, Expressive virtual modalities for augmenting the perception of affective movements, in International Conference on Multimodal Interfaces, Proceedings of the International Workshop on Affective-Aware Virtual Agents and Social Robots, ACM, ed., 2009. [CI62] A. Clay, E. Delord, N. Couture, and G. Domenger, Augmenting a ballet dance show using the dancer’s emotion: conducting joint research in dance and computer science, in Proceedings of International Conference on Arts and Technology (ArtsIT2009), vol. à paraître, 2009. [CI63] A. Clay, J.-C. Lombardo, N. Couture, and J. Conan, Bi-manual 3d painting: an interaction paradigm for augmented reality live performance, in HCITOCH - Human-Computer Interaction, Tourism and Cultural Heritage - 2012, 2012. [CI64] A. Clay, J.-C. Lombardo, J. Conan, and N. Couture, Towards bi-manual 3d painting: generating virtual shapes with hands., in Proceedings of the 1st symposium on Spatial user interaction (SUI ’13)., 2013, p. 79. [CI65] L. Clément, K. Gerdes, and R. Marlet, Grammaires d’erreur – correction grammaticale avec analyse profonde et proposition de corrections minimales, in 16e conférence sur le Traitement Automatique des Langues Naturelles (TALN 2009), 2009. [CI66] L. Clément, K. Gerdes, and R. Marlet, A grammar correction algorithm – deep parsing and minimal corrections for a grammar checker, in 14th conference on Formal Grammar (FG 2009), 2009. 250 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI67] P. Coupé, S. Eskildsen, J. Manjón, V. Fonov, J. Pruessner, M. Allard, and L. Collins, Snipe: A new method to identify imaging biomarker for early detection of alzheimer’s disease, in MICCAI 2012 Workshop on Novel Biomarkers for Alzheimer’s Disease and Related Disorders, 2012, pp. 41–51. [CI68] P. Coupé, V. Fonov, S. Eskildsen, J. Manjón, D. Arnold, and L. Collins, Influence of the training library composition on a patch-based label fusion method: Application to hippocampus segmentation on adni dataset., in Alzheimer’s & Dementia: The Journal of the Alzheimer’s Association, vol. 7, 2011. [CI69] P. Coupé, P. Hellier, X. Morandi, and C. Barillot, Intraoperative ultrasonography for the correction of brainshift based on the matching of hyperechogenic structures, in Biomedical Imaging: From Nano to Macro, 2010 IEEE International Symposium on, 2010, pp. 1405 – 1408. [CI70] P. Coupé, J. V. Manjon, V. Fonov, J. Pruessner, M. Robles, and L. Collins, Nonlocal patch-based label fusion for hippocampus segmentation, in Lecture Notes in Computer Science, vol. 6363, 2010, pp. 129–136. [CI71] P. Coupé, J. Manjón, V. Fonov, S. Eskildsen, and L. Collins, Patch-based morphometry: Application to alzheimer’s disease, in Alzheimer’s and Dementia, 2012. [CI72] P. Coupé, J. Manjón, E. Gedamu, D. Arnold, M. Robles, and L. Collins, Object-based rician noise estimation for mr images, in Neuroimage, 2009. [CI73] P. Coupé, J. Manjón, M. Robles, and L. Collins, Adaptive multiresolution denoising filter for 3d mr images, in Neuroimage, vol. 47, 2009. [CI74] P. Coupé, O. Périot, J. V. Manjon, B. Hiba, and M. Allard, Impact of dwi denoising on track-density imaging, in Organization for Human Brain Mapping 2014 Annual Meeting, 2014. [CI75] A. Cohé, F. Decle, and M. Hachet, tbox: A 3d transformation widget designed for touch-screens, in ACM CHI Conference on Human Factors in Computing Systems, [Note], 2011, pp. 3005–3008. [CI76] A. Cohé and M. Hachet, Understanding user gestures for manipulating 3d objects from touchscreen inputs, in Graphics Interface, ACM, 2012, pp. 157–164. [CI77] H. Coqueugniot, P. Desbarats, B. Dutailly, M. Panuel, and O. Dutour, Paléopathologie 3d : apports diagnostique, didactique et de diffusion., in Actes du Colloque Virtual Retrospect 2009, A. Editions, ed., 2010, pp. 177–180. [CI78] P. Cutellic and F. Lotte, Augmented iterations: Integrating neural activity in evolutionary computation for design, in eCAADe 2013, 2013. [CI79] B. De Araujo, G. Casiez, J. Jorge, and M. Hachet, Modeling on and above a stereoscopic multitouch display, in 3DCHI - The 3rd Dimension of CHI, 2012, pp. 79–86. [CI80] B. De Haas, M. Robine, P. Hanna, R. C. Veltkamp, and F. Wiering, Comparing harmonic similarity measures, in Proceedings of the International Computer Music Modeling and Retrieval Conference (CMMR’10), 2010. [CI81] P. Desbarats, S. Gueorguieva, R. Synave, H. Coqueugniot, and B. Dutailly, Digital anthropology for effective retrieval of the anterior fontanelle, in Proceedings of the 10th European Congress of ISS, A. M. D. o. M. U. o. M. I. Vincenzo Capasso, Giacomo Aleti, ed., no. ISBN: 978-887488-310-3 in MIRIAM Project Series, Societa editrice esculapio, 40131 Bologna, Italy, 2009, pp. 421– 425. [CI82] F. Decle and M. Hachet, A study of direct versus planned 3d camera manipulation on touch-based mobile phones, in proceedings of MobileHCI 2009, 2009. F.2. IMAGE AND SOUND 251 [CI83] F. Decle, M. Hachet, and P. Guitton, Scruticam : Camera manipulation technique for 3d objects inspection, in Proceedings of 3DUI 2009, 2009. [CI84] B. Delezoide, H. Le Borgne, P.-A. Moëllic, D. Gorisse, F. Precioso, F. Wang, B. Merialdo, P.-H. Gosselin, L. Granjon, D. Pellerin, M. Rombaut, H. Bredin, L. Koenig, H. Lachambre, E. El Khoury, B. Mansencal, Y. Zhou, J. Benois-Pineau, H. Jégou, S. Ayache, B. Safadi, G. Quenot, J. Fabrizio, M. Cord, H. Glotin, Z. Zhao, E. Dumont, and B. Augereau, Irim at trecvid2009: High level feature extraction, in TREC online proceedings, 2010. [CI85] B. Delezoide, F. Precioso, P. Gosselin, M. Redi, B. Merialdo, L. Granjon, D. Pellerin, M. Rombaut, H. Jégou, R. Vieux, A. Bugeau, B. Mansencal, J. Benois-Pineau, H. Boujut, S. Ayache, B. Safadi, F. Thollard, G. Quénot, H. Bredin, M. Cord, A. Benoît, P. Lambert, T. Strat, J. Razik, S. Paris, and H. Glotin, Irim at trecvid 2011: High level feature extraction and instance search, in TREC Video Retrieval Evaluation workshop, 2011, p. 10 pages. [CI86] X. Desquesnes, A. Elmoataz, O. Lezoray, and V.-T. Ta, Efficient algorithms for image and high dimensional data processing using eikonal equation on graphs, in Proceedings, 2010, pp. 647–658. [CI87] B. Dutailly, H. Coqueugniot, P. Desbarats, S. Gueorguieva, and R. Synave, 3d surface reconstruction using hmh algorithm, in Proceedings of IEEE International Conference on Image Processing, 2009, pp. 2505–2508. [CI88] S. Eskildsen, P. Coupé, D. García-Lorenzo, V. Fonov, J. Pruessner, and L. Collins, Improving prediction of alzheimer’s disease using patterns of cortical thinning and homogenizing images according to disease stage, in MICCAI 2012 Workshop on Novel Biomarkers for Alzheimer’s Disease and Related Disorders, 2012, pp. 79–90. [CI89] S. Eskildsen, P. Coupé, K. Leung, V. Fonov, N. Guizard, S. Wassef, L. Ostergaard, and L. Collins, Beast: Brain extraction using multiresolution nonlocal segmentation., in MICCAI Workshop on Multi-Atlas Labeling and Statistical Fusion, 2011, pp. 97–108. [CI90] S. Eskildsen, V. Fonov, P. Coupé, and L. Collins, Visualizing stages of cortical atrophy in progressive mci from the adni cohort, in Alzheimer’s and Dementia, 2012. [CI91] S. Eskildsen, V. Fonov, P. Coupé, L. Ostergaard, and L. Collins, Prediction of mci converters in the adni cohort using patterns of cortical thinning, in Alzheimer’s & Dementia: The Journal of the Alzheimer’s Association, vol. 7, 2011. [CI92] S. Eskildsen, V. Fonov, P. Coupé, L. R. Ostergaard, and L. Collins, Prediction of alzheimer’s disease in subjects with mild cognitive impairment using structural patterns of cortical thinning, in IFMBE Proceedings, vol. 34, 2011, pp. 156–159. [CI93] G. Facciolo, R. Sadek, A. Bugeau, and V. Caselles, Temporally consistent gradient domain video editing, in International Conference on Energy Minimization Methods, 2011, pp. 59–73. [CI94] P. Ferraro, J. Allali, P. Hanna, and M. Robine, Extending alignment algorithm for polyphonic comparison, in Proceedings of the International Computer Music Modeling and Retrieval Conference, 2009, pp. 206–209. [CI95] P. Ferraro, P. Hanna, L. Imbert, and T. Izard, Accelerating query-by-humming on gpu, in Proceedings of the 10th International Society for Music Information Retrieval Conference, 2009. [CI96] P. Ferraro, P. Hanna, L. Imbert, and T. Izard, Accelerating query-by-humming on gpu, in 10th International Society for Music Information Retrieval Conference, 2009, pp. 279–284. [CI97] D. Fourer, M. Guerry, T. Shochi, J.-L. Rouas, J.-J. Aucouturier, and A. Rilliard, Analyse prosodique des affects sociaux dans l’interaction face à face en japonais, in XXXèmes Journées d’études sur la parole, 2014. 252 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI98] D. Fourer and S. Marchand, Informed spectral analysis for isolated audio source parameters estimation, in Applications of Signal Processing to Audio and Acoustics (WASPAA), 2011 IEEE Workshop on, 2011, pp. 57 – 60. [CI99] D. Fourer and S. Marchand, Informed multiple-f0 estimation applied to monaural audio source separation, in Proceedings of the European Conference on Signal Processing (EUSIPCO), 2012. [CI100] D. Fourer, T. Shochi, J.-L. Rouas, J.-J. Aucouturier, and M. Guerry, Going ba-na-nas: Prosodic analysis of spoken japanese attitudes, in Proceeding of Speech Prosody 2014, 2014, p. 4. [CI101] V. Fonov, P. Coupé, S. Eskildsen, and L. Collins, Atrophy specific mri brain template for alzheimer’s disease and mild cognitive impairment, in Alzheimer’s & Dementia: The Journal of the Alzheimer’s Association, vol. 7, 2011. [CI102] V. Fonov, P. Coupé, S. Eskildsen, J. Manjon, and L. Collins, Multi-atlas labeling with population-specific template and non-local patch-based label fusion, in MICCAI 2012 Grand Challenge and Workshop on Multi-Atlas Labeling, 2012, pp. 63–66. [CI103] A. Fornes, M. Visani, A. Dutta, V. C. Kieu, and N. Journet, The icdar/grec 2013 music scores competition on staff removal, in Proceedings of the Tenth IAPR International Workshop on Graphics Recognition (GREC 2013), 2013, pp. 129–132. [CI104] J. Frey, C. Mühl, F. Lotte, and M. Hachet, Review of the use of electroencephalography as an evaluation method for human-computer interaction, in PhyCS 2014 - International Conference on Physiological Computing Systems, SCITEPRESS, 2014. [CI105] J. Frey, L. Pommereau, F. Lotte, and M. Hachet, Assessing the zone of comfort in stereoscopic displays using eeg, in CHI ’14 Extended Abstracts on Human Factors in Computing Systems, ACM, 2014, pp. 2041–2046. [CI106] E. Garyfallidis, M. Paquette, S. St-Jean, P. Coupé, and M. Descoteaux, Deconvolution enhanced generalized q-sampling 2 and dsi deconvolution, in ISBI’13, HARDI Reconstruction Challenge, 2013, p. 18. [CI107] E. Garyfallidis, S. St-Jean, M. Paquette, P. Coupé, and M. Descoteaux, Constrained spherical deconvolution on signal and odf values, in ISBI’13, HARDI Reconstruction Challenge, 2013, p. 17. [CI108] L. George, F. Lotte, R. Viciana Abad, and A. Lécuyer, Using scalp electrical biosignals to control an object by concentration and relaxation tasks: Design and evaluation, in International Conference of the IEEE EMBS, IEEE-EMBS, ed., 2011. [CI109] S. Gorlow, E. Habets, and S. Marchand, Multichannel object-based audio coding with controllable quality, in Proceedings of the 2013 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP 2013), 2013, pp. 561–565. [CI110] S. Gorlow and S. Marchand, Informed source separation: Underdetermined source signal recovery from an instantaneous stereo mixture, in Proceedings of the 2011 IEEE Workshop on Applications of Signal Processing to Audio and Acoustics (WASPAA 2011), 2011, pp. 309–312. [CI111] S. Gorlow and S. Marchand, Informed separation of spatial images of stereo music recordings using second-order statistics, in Proceedings of the 2013 IEEE International Workshop on Machine Learning for Signal Processing (MLSP), 2013, pp. 1–6. [CI112] S. Gorlow and S. Marchand, Reverse engineering stereo music recordings pursuing an informed two-stage approach, in Proceedings of the 2013 International Conference on Digital Audio Effects (DAFx-13), 2013, pp. 1–8. F.2. IMAGE AND SOUND 253 [CI113] S. Gorlow, J. Reiss, and E. Duru, Restoring the dynamics of clipped audio material by inversion of dynamic range compression, in Proceedings of the 2014 IEEE International Symposium on Broadband Multimedia Systems and Broadcasting (BMSB), 2014, p. 1. [CI114] D. Gorisse, F. Precioso, P. Gosselin, L. Granjon, D. Pellerin, M. Rombaut, H. Bredin, L. Koenig, H. Lachambre, E. El Khoury, R. Vieux, B. Mansencal, Y. Zhou, J. Benois-Pineau, H. Jégou, S. Ayache, B. Safadi, Y. Tong, F. Thollard, G. Quénot, A. Benoît, and P. Lambert, Irim at trecvid 2010: High level feature extraction and instance search, in TREC Video Retrieval Evaluation workshop, 2010. [CI115] D. Gorisse, F. Precioso, P.-H. Gosselin, L. Granjon, D. Pellerin, M. Rombaut, H. Bredin, L. Koenig, R. Vieux, B. Mansencal, J. Benois-Pineau, H. Boujut, C. Morand, H. Jégou, S. Ayache, B. Safadi, Y. Tong, F. Thollard, G. Quénot, M. Cord, A. Benoît, and P. Lambert, Irim at trecvid 2010: Semantic indexing and instance search, in TREC online proceedings, 2010. [CI116] X. Granier, R. Vergne, R. Pacanowski, P. Barla, and P. Reuter, Enhancing surface features with the radiance scaling meshlab plugin, in Computer Applications and Quantitative Methods in Archaeology (CAA) 2012, A. Chrysanthi, D. Wheatley, I. Romanowska, C. Papadopoulos, P. Murrieta-Flores, T. Sly, G. Earl, and P. Verhagen, eds., Amsterdam University Press, 2012. [CI117] S. Gueorguieva, R. Synave, and C. Couture, Teaching geometric modeling algorithms and data structures through laser scanner acquisition pipeline, in Proceedings, vol. 6454 of Lecture Notes in Computer Science, 2010, pp. 416–428. [CI118] S. Gueorguieva, R. Synave, and C. Couture, Trochlear surface reconstruction and evaluation based on laser scanner acquisition, in Proceedings of IEEE Image Systems and Techniques 2010, 2010, pp. 320–324. [CI119] N. Guizard, P. Coupé, N. Stifani, S. Stifani, and D. Louis Collins, Robust 3d reconstruction and mean-shift clustering of motoneurons from serial histological images, in Lecture Notes in Computer Science (LNCS), 2010, pp. 191–199. [CI120] N. Guizard, V. Fonov, B. Aubert-Broche, D. García-Lorenzo, P. Coupé, S. Eskildsen, and D. Louis Collins, Robust individual template pipeline for longitudinal mr images, in MICCAI 2012 Workshop on Novel Biomarkers for Alzheimer’s Disease and Related Disorders, 2012, p. 231. [CI121] P. Guyomarc’H, H. Coqueugniot, B. Dutailly, and C. Couture, Nasal morphology and predictability for facial approximation: a 3d geometric morphometric approach., in Proceedings of the 4th Meeting of Junior Scientists in Anthropology, H. L. K. M. R. A. W. C. Buhl C.A., Engel F., ed., 2010, pp. 84–97. [CI122] M. Hachet, B. Bossavit, A. Cohé, and J.-B. De La RiviÈre, Toucheo: Multitouch and stereo combined in a seamless workspace., in UIST 2011 - ACM Symposium on User Interface Software and Technology, 2011, pp. 587–592. 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Caselles, Stereoscopic image inpainting: distinct depth maps and images inpainting, in Stereoscopic image inpainting: distinct depth maps and images inpainting, 2010, pp. 4101–4104,. [CI128] A. Hervieu, N. Papadakis, A. Bugeau, P. Gargallo I Piracés, and V. Caselles, Stereoscopic image inpainting using scene geometry, in ICME 2011 - IEEE International Conference on Multimedia and Expo, IEEE, 2011, pp. 1–6. [CI129] S. Hu, P. Coupé, J. Pruessner, and L. Collins, Validation of appearance-model based segmentation with patch-based refinement on medial temporal lobe structures, in MICCAI Workshop on Multi-Atlas Labeling and Statistical Fusion, 2011, pp. 28–37. [CI130] O. Hugues, J.-M. Cieutat, and P. Guitton, An experimental augmented reality platform application for assisted maritime navigation: Following targets, in Proceedings of the 12th Virtual Reality International Conference, 2010, pp. 149–154. [CI131] O. Hugues, J.-M. Cieutat, and P. Guitton, An experimental augmented reality platform for assisted maritime navigation, in In First International Conference on Augmented Human (AH2010), ACM, ed., 2010, pp. 87–92. [CI132] L. Ioannidis and J.-L. Rouas, Exploiting semantic content for singing voice detection, in Sixth IEEE International Conference on Semantic Computing (IEEE ICSC2012), 2012. [CI133] D. Janin, F. Berthaud, M. Desainte-Catherine, Y. Orlarey, and S. Salvati, The tcalculus : towards a structured programing of (musical) time and space, in 2013 ACM SIGPLAN Workshop on Functional Art, Music, Modeling & Design, 2013, pp. 23–34. [CI134] D. Janin, F. Berthaut, and M. Desainte-Catherine, Multi-scale design of interactive music systems : the libtuiles experiment, in Proceedings of the Sound and Music Computing Conference (SMC), R. Bresin, ed., 2013, pp. 123–129. [CI135] J. Jankowski and M. Hachet, Interaction techniques for interactive 3d web environments, in Web3D, 2013. [CI136] J. Jankowski and M. Hachet, A survey of interaction techniques for interactive 3d environments, in Eurographics 2013 - STAR, 2013. [CI137] J. Jankowski, T. Hulin, and M. Hachet, A study of street-level navigation techniques in 3d digital cities on mobile touch devices, in IEEE 3DUI - Symposium on 3D User Interfaces, 2014, pp. 35– 38. [CI138] C. Jeunet, C. Mühl, and F. Lotte, Design and validation of a mental and social stress induction protocol towards load-invariant physiology-based detection, in International Conference on Physiological Computing Systems, 2014. [CI139] N. Journet, A. Vialard, and J.-P. Domenger, Analyse de fontes anciennes : de la génération de données synthétiques à la reconnaissance, in Actes du 11ème Colloque International Francophone sur l’Ecrit et le Document, 2010. [CI140] C. Kaes and H. Nicolas, An approach to trajectory estimation of moving objects in the h.264 compressed domain, in Proceedings of IEEE-PSIVT, 2009. [CI141] C. Kaes and H. 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Domenger, An efficient parametrization of character degradation model for semi-synthetic image generation, in Proceedings of the Workshop on Historical Document Imaging and Processing 2013 (HIP 2013), 2013, pp. 29–35. [CI150] S. Knoedel and M. Hachet, Multi-touch rst in 2d and 3d spaces: Studying the impact of directness on user performance, in IEEE 3DUI, 2011, pp. 75–78. [CI151] J. Laviole and M. Hachet, Demo: Spatial augmented reality for physical drawing, in Adjunct proceedings of the 25th annual ACM symposium on User interface software and technology, 2012, pp. 9–10. [CI152] J. Laviole and M. Hachet, Papart : interactive 3d graphics and multi-touch augmented paper for artistic creation, in 3D User Interfaces (3DUI), 2012 IEEE Symposium on, IEEE, 2012, pp. 3 – 6. [CI153] J. Laviole and M. Hachet, Spatial augmented reality to enhance physical artistic creation., in Adjunct proceedings of the 25th annual ACM symposium on User interface software and technology, 2012, pp. 43–46. [CI154] J. Laviole, M. Hachet, and C. Schlick, Tabletop games using real environment and physical simulation, in FDG’11 - Foundations of Digital Games, June, 28 - July 1 2011, ACM, 2011. [CI155] J. Laviole, F. Lotte, and M. Hachet, Digitally assisted stereo drawing, in The 3rd Dimension of CHI (3DCHI) - Workshop at CHI 2012, 2012. [CI156] M. Lagrange, M. Robine, and P. Hanna, Meter class profiles for music similarity and retrieval, in Proceedings of the 10th International Society for Music Information Retrieval Conference (ISMIR), 2009. [CI157] F. Larrue, H. Sauzeon, L. Aguilova, F. Lotte, M. Hachet, and B. Nkaoua, Brain computer interface vs walking interface in vr: The impact of motor activity on spatial transfer, in ACM symposium on Virtual Reality Software and Technology (VRST’2012), 2012, pp. 113–120. [CI158] F. Larrue, H. Sauzeon, D. Foloppe, G. Wallet, J.-R. Cazalets, C. Gross, M. Hachet, and B. 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Eskildsen, J. Manjón, P. Coupé, V. Fonov, and L. Collins, Superresolution improves mri cortical segmentation with face, in Organization for Human Brain Mapping, 2012. [SI12] V. Fonov, P. Coupé, M. Styner, and L. Collins, Automatic lateral ventricle segmentation in infant population with high risk of autism, in Organization for Human Brain Mapping, 2012. [SI13] C. Gaser and P. Coupé, Impact of non-local means filtering on brain tissue segmentation, in Organization for Human Brain Mapping 2010 Annual Meeting, 2010. [SI14] S. Gorlow and S. Marchand, On the informed source separation approach for interactive remixing in stereo, in 134th Audio Engineering Society (AES) Convention, 2013. [SI15] N. Guizard, P. Coupé, V. Fonov, D. Arnold, and L. Collins, Robust fusion of jacobian maps for deformation-based morphometry, in Organization for Human Brain Mapping 2011 Annual Meeting, 2011. [SI16] P. Guyomarc’H, H. Coqueugniot, B. Dutailly, and C. Couture, The anatomical placement of the human eyeball in the orbit – new metric data and guidelines proposal for facial identification., in The 79th annual meeting of the American Association of Physical Anthropologists, 2010. 264 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [SI17] C. Haegelen, N. Guizard, P. Coupé, F. Lalys, P. Jannin, X. Morandi, and D. L. Collins, Validation of basal ganglia segmentation on a 3t mri template, in Human Brain Mapping, 2011. [SI18] O. Hugues, J.-M. Cieutat, V. Pilnière, and P. Guitton, Sig maritime augmenté (sigma) un système enactif de réalité augmentée, in 12e Conférence Internationale en Ergonomie et Informatique Avancée (Ergo’IA 2010), 2010, pp. 1–3. [SI19] J. Manjón, P. Coupe, A. Buades, L. Collins, and M. Robles, Mri denoising based on sparseness and self-similarity, in Organization for Human Brain Mapping 2011 Annual Meeting, 2011. [SI20] R. Moussa, M. Beurton-Aimar, and P. Desbarats, On the use of social agents for image segmentation, in International Conference on complex systems and applications (iccsa 2009), 2009. [SI21] P. Olivier, J. Boukhobza, J.-P. Babau, D. Picard, and S. Rubini, Implémentation matérielle des services d’un rtos sur circuit reconfigurable, in Ecole d’été du temps réel, 2011, p. 199. Conferences without published proceedings (national) [SN1] A. Clay, G. Domenger, and N. Couture, Conférence dansée : Recherche conjointe en art et science, in L’informatique Affective au service de l’Art, 2011. [SN2] A. Clay, J.-C. Lombardo, N. Couture, and J. Conan, Peinture numérique 3d bi-manuelle: un paradigme d’interaction pour la réalité augmentée en spectacle vivant, in Journées de l’Association Française de Réalité Virtuelle, 2012. [SN3] N. Couture and A. Clay, Capture d’émotions et reconnaissance par la gestuelle : conférencedémonstration dansée, in Workshop Emotion - Innovation - Technologie (ERGOIA’09), 2009. [SN4] H. Coqueugniot and P. Desbarats, Imagerie 3d : de l’acquisition à l’impression. intérêts muséographiques et pédagogiques, in 1859-2009 : 150 ans de la Société d’Anthropologie de Paris, des conceptions d’hier aux recherches de demain, 2009. [SN5] H. Coqueugniot, P. Desbarats, B. Dutailly, M. Panuel, and O. Dutour, Paléopathologie 3d : apports diagnostique, didactique et de diffusion., in 1835èmes Journées de la Société d’Anthropologie de Paris, 2010. [SN6] G. Domenger, A. Reumaux, A. Clay, E. Delord, and N. Couture, Improvisation dansée augmentée: Un conte numérique, in Festival des Éthiopiques 2009, 2009. [SN7] P. Guyomarc’H, H. Coqueugniot, B. Dutailly, and C. Couture, Élaboration et exploitabilité d’une collection anthropologique numérique de référence., in 1835èmes Journées de la Société d’Anthropologie de Paris, 2010. [SN8] P.-L. Henaux, P. Hellier, P. Jannin, P. Coupé, C. Haegelen, S. Diabara, and X. Morandi, Evaluation de la précision d’une méthode de recalage automatique échographie 3d intraopératoire - irm pré-opératoire en neurochirurgie, in Congrès de la Société de Neurochirurgie de Langue Française, 2009. [SN9] O. Hugues, J.-M. Cieutat, and P. Guitton, Plateforme expérimentale de réalité augmentée pour l’aide à la navigation maritime, in Association Française de Réalité Virtuelle, 2010. [SN10] P. Olivier, J. Boukhobza, and E. Senn, Performance evaluation of flash file systems, in Colloque du GDR SoC-SiP, 2012, p. 10. [SN11] P. Olivier, J. Boukhobza, and E. Senn, Toward a unified performance and power consumption nand flash memory model of embedded and solid state secondary storage systems, in GDR Soc-Sip 2013 Meeting, 2013. BIBLIOGRAPHY 265 [SN12] G. Riviere, K. Borgiel, and N. Couture, Les cartouches, un concept d’interfaces tangibles, appliquées à l’apprentissage des jeunes enfants, in Cinquième édition de la conférence Environnements Informatiques pour l’Apprentissage Humain, 2011. Other publications (international) [AI1] O. Augereau, N. Journet, A. Vialard, and J.-P. Domenger, Improving classification of an industrial document image database by combining visual and textual features. 2014. [AI2] O. Ben Ahmed, J. Benois-Pineau, M. Allard, C. Ben Amar, and G. Catheline, Classification of alzheimer’s disease subjects from mri using hippocampal visual features. 2014. [AI3] F. Berthaut, M. Desainte-Catherine, J. Bages I. Rubi, and D. Fober, Atelier: Quelles interfaces pour combiner l’ écriture et la manipulation dynamique du temps dans les systèmes musicaux interactifs ? 2013. [AI4] H. Boujut, J. Benois-Pineau, T. Ahmed, O. Hadar, and P. Bonnet, Nr video quality metric with visual saliency from h.264 code stream in lossy network channels. 2012. [AI5] H. Boujut, A. Bugeau, and J. Benois-Pineau, Visual search for objects in a complex visual context: what we wish to see. 2013. [AI6] H. Boujut, V. Buso, and J. Benois-Pineau, Objective prediction of visual saliency maps in egocentric videos for content-action interpretation. 2013. [AI7] A. Bugeau, V.-T. Ta, and N. Papadakis, Variational exemplar-based image colorization. 2013. [AI8] N. Couture, The first tangible interaction studio, ERCIM News, Image Understanding, (2013), p. 53. [AI9] P. Desbarats, S. Gueorguieva, R. Synave, H. Coqueugniot, and B. Dutailly, Strasbourg juvenile collection: Computer assisted anthropology for the anterior fontanelle reconstruction and size evaluation. Rapport de recherche RR-1454-09 LaBRI, 2009. [AI10] S. Gorlow, Reverse audio engineering for active listening and other applications, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AI11] I. González-Díaz, H. Boujut, V. Buso, J. Benois-Pineau, and J.-P. Domenger, Saliencybased object recognition in video. 2013. [AI12] X. Granier, Nouvelles représentations pour une synthèse d’images plus dirigée vers l’utilisateur, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2009. [AI13] M. Hachet, Interfaces utilisateur 3D, des terminaux mobiles aux environnements virtuels immersifs, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2010. [AI14] J. Hadim, R. Pacanowski, X. Granier, and C. Schlick, Flat bidirectional texture functions, tech. rep., 2009. [AI15] I. Ihrke, X. Granier, G. Guennebaud, L. Jacques, and B. Goldluecke, An introduction to optimization techniques in computer graphics. 2014. [AI16] C. Jeunet, C. Mühl, and F. Lotte, Conception et validation d’un protocole pour induire du stress et le mesurer dans des signaux physiologiques. 2013. [AI17] S. Karaman, J. Benois-Pineau, and R. Mégret, Nested graph words for object recognition, tech. rep., 2011. [AI18] S. Knödel, M. Hachet, and P. Guitton, Interactive generation and modification of cutaway illustrations for polygonal models. 2009. 266 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [AI19] J. Laviole, Interaction en Réalité Augmentée Spatiale pour le Dessin Physique, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AI20] F. Lotte, A. Lécuyer, and C. Guan, Towards a fully interpretable eeg-based bci system. 2010. [AI21] H. Lu, Échantillonnage d’importance des sources de lumière réalistes, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2014. [AI22] J. V. Manjon, P. Coupé, A. Buades, D. L. Collins, and M. Robles, Mri superresolution using self similarity and image priors. 2010. [AI23] N. Mellado, Analyse des objets 3D a plusieurs échelles: application à l’assemblage de formes, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2012. [AI24] R. Pacanowski, X. Granier, C. Schlick, and P. Poulin, Volumetric vector-based representation for indirect illumination caching, tech. rep., 2009. [AI25] F. Pierre, J.-F. Aujol, A. Bugeau, and V.-T. Ta, Hue constrained image colorization in the rgb space. 2014. [AI26] B. Raymond, G. Guennebaud, P. Barla, R. Pacanowski, and X. Granier, Understanding anisotropic highlights for interactive appearance editing. 2013. [AI27] Y. Ren, A. Bugeau, and J. Benois-Pineau, Bag-of-bags of words model over irregular graph partitions for image retrieval, tech. rep., 2013. [AI28] Y. Ren, A. Bugeau, and J. Benois-Pineau, Visual object retrieval by graph features, tech. rep., 2013. [AI29] Y. Ren, A. Bugeau, and J. Benois-Pineau, Bag-of-bags of words : Irregular graph pyramids vs spatial pyramid matching for image retrieval, tech. rep., 2014. [AI30] P. Reuter, N. Mellado, X. Granier, I. Hairy, R. Vergnieux, and N. Couture, Semiautomatic 3d acquisition and reassembly of cultural heritage: The search project, ERCIM News, ICT for Cultural Heritage, (2011), pp. 12–13. [AI31] G. Riviere and N. Couture, Cinquième atelier du gt interaction tangible. 2013. [AI32] D. Vanderhaeghe, R. Vergne, P. Barla, and W. Baxter, Bidirectional appearance distribution function for stylized shading, tech. rep., 2010. [AI33] C. J. Zubiaga Peña, L. Belcour, P. Barla, and X. Granier, Transfer and manipulation of appearance from the image of a sphere. 2013. Other publications (national) [AN1] P. Baltazar, A. Allombert, R. Marczak, J.-M. Couturier, M. Roy, A. Sèdes, and M. Desainte-Catherine, Virage : Une réflexion pluridisciplinaire autour du temps dans la création numérique. 2009. [AN2] S. Boyé, Représentation hybride pour la modélisation géométrique interactive, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2012. [AN3] S. Boyé, P. Barla, and G. Guennebaud, Interview 3dvf - recherche : Free-form vector gradients. 2012. [AN4] P. Bénard, Stylisation temporellement cohérente d’animations 3D basée sur des textures, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2011. [AN5] P. Bénard, A. Bousseau, V. Boyer, J. Thollot, and D. Vanderhaeghe, Cours : Rendu expressif. 2010. BIBLIOGRAPHY 267 [AN6] A. Clay, G. Domenger, N. Couture, J.-B. De La RiviÈre, and M. Desainte-Catherine, Spectacle augmenté : le projet care, un processus de recherche. Spectacle au casino de biarritz, mise en scène du processus de recherche du projet ANR CARE et démonstration des technologies développées au cours du projet., 2011. [AN7] D. Fourer, Approche informée pour l’analyse du son et de la musique, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AN8] D. Fourer, Approche informée pour l’analyse du son et de la musique, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AN9] P. Guitton, Agir avec doigté en trois dimensions. 2010. [AN10] M. Hachet, Quand la réalité virtuelle rencontre les surfaces tactiles. 2013. [AN11] M. Hachet and C. Castro, Arrêtez de regarder la 3d, prenez-en le contrôle ! 2013. [AN12] M. Hachet and B. Martin, Interaction hommes-machines : une histoire de 30 ans. 2013. [AN13] F. Lotte, Grâce au numérique, on peut lire dans les pensées. 2013. [AN14] V. Rabeux, Évaluation de la qualité des documents anciens numérisés, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AN15] G. Rivérieux, P. Guitton, C. Kirchner, M. Medves, M. Jacques, A. Monteil, and L. Romary, Episciences iam : un projet entre rupture et continuité. 2014. [AN16] A. Rousseau, A. Darnaud, B. Goglin, C. Acharian, C. Leininger, C. Godin, C. Holik, C. Kirchner, D. Rives, E. Darquie, E. Kerrien, F. Neyret, F. Masseglia, F. Dufour, G. Berry, G. Dowek, H. Robak, H. Xypas, I. Illina, I. Gnaedig, J. Jongwane, J. Ehrel, L. Viennot, L. Guion, L. Calderan, L. Kovacic, M. Collin, M.-A. Enard, M.-H. Comte, M. Quinson, M. Olivi, M. Giraud, M. Dorémus, M. Ogouchi, M. Droin, N. Lacaux, N. Rougier, N. Roussel, P. Guitton, P. Peterlongo, R.-M. Cornus, S. Vandermeersch, S. Maheo, S. Lefebvre, S. Boldo, T. Viéville, V. Poirel, A. Chabreuil, A. Fischer, C. Farge, C. Vadel, I. Astic, J.-P. Dumont, L. Féjoz, P. Rambert, P. Paradinas, S. De Quatrebarbes, and S. Laurent, Médiation scientifique : une facette de nos métiers de la recherche, tech. rep., 2013. [AN17] R. Vergne, P. Barla, X. Granier, and R. Fleming, Interview 3dvf: Retour sur surface flows (siggraph 2012). 2012. Patents (international) [BI1] J.-B. De La RiviÈre, C. Christophe, M. Hachet, B. Bossavit, and G. Casiez, System for colocating a touch screen and a virtual object, and device for manipulating virtual objects implementing such a system. patent n◦ WO2012172044A1, 2012. [BI2] B. Martin, P. Hanna, V. T. Ta, M. Desainte-Catherine, J. Allali, M. Robine, and P. Ferraro, Exemplar based assignment of large missing audio parts using string matching on tonal features. patent n◦ US61/547,854., 2011. Patents (national) [BN1] M. Hachet, J.-B. De La RiviÈre, B. Bossavit, and G. Casiez, Système de colocalisation d’un écran tactile et d’un objet virtuel et dispositif pour la manipulation d’objets virtuels mettant en œuvre un tel système. patent n◦ 1155341, 2011. Patents 268 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – Système de colocalisation d’un écran tactile et d’un objet virtuel et dispositif pour la manipulation d’objets virtuels mettant en oeuvre un tel système. Martin Hachet ; J.-B. De La Rivière; Benoît Bossavit; Gery Casiez. France, 1155341. Jun. 2011 – Système d’affichage de données caractérisant l’activité cérébrale d’un individu, procédé et programme d’ordinateur associé, Lécuyer A., Mercier-Granady J., Lotte F., Marchal M., French patent application 13/63180, INRIA, December 2013 – Simultaneous segmentation and grading of structures for state determination. Collins L., Coupé P.; Publication No. WO/2013/037070. International Application No. PCT/CA2012/050644. McGill University. – A Process for Assigning Audio Data in Missing Audio Parts of a Music Piece and Device for Performing the Same. Allali J., Desainte-Catherine M., Ferraro P., Hanna P., Martin B., Matthias ROBINE, Ta V.-T. Université Bordeaux 1, institut polytechnique de Bordeaux 2013, WO/2013057680 – Procédé de modélisation d’une pièce formée de tissus osseux. Coqueugniot H., Desbarats P., Dutailly B., Dutour O. Université de Bordeaux, Université Aix-Marseille. BR39066/EP/vh (France). Registered software – Navidget, https://team.inria.fr/potioc/fr/scientific-subjects/navidget-for-easy-3d-camera-positioning-from2d-inputs/ – OpenViBE, http://http://openvibe.inria.fr/ – Eigen, http://eigen.tuxfamily.org/ – PFScalibration, http://pfstools.sourceforge.net/index.html – SmithDR, http://smithdr.labri.fr/ – Corpus ICOS, http://www.openvideo.org, – Corpus Video Quality, Qualinet – BirdSong, 2012 – Musical Structure Analysis, 2012 – Neko3D, 2012 – CityBird, 2014 Other software – PatateLib, http://patate.gforge.inria.fr/html/ – ALTALib, http://alta.gforge.inria.fr/ – HDRSee, http://mhdrviewer.gforge.inria.fr/ – LIBa2ri, http://liba2ri.free.fr/ – MMASS – MAgIS – AMORSS – BEaST – volBain – MRIdenoisingPackage – DWIdenoisingPackage – LPCA – SNIPE – CANDLE – CLASR Completed PhDs – Aurélie Cohé, 2009-2012 – Florent Berthaut, 2007-2010 – Fabrice Dècle, 2006-2009 – Sebastian Knoedel, 2006-2009 F.2. IMAGE AND SOUND – – – – – – – – – – – Jérôme Baril, 2005-2010 Julien Hadim, 2005-2009 Romain Pacanowski, 2005-2009 Rémi Synave, 2006-2009 Romain Vergne, 2007-2010 Yann Savoye, 2008-2012 Simon Boyé, 2009-2012 Nicolas Mellado, 2009-2012 Jéremy Lavoile, 2010-2013 Richard Moussa, 2009-2012 Vincent Rabbeux, 2009-2012 including cotutelle PhDs (international) – Camille Jeunet, Université de Bristol, 2013-2016 – Jiazhou Chen, 2009-2012 including cotutelle PhDs (national) – Cuong Kieu Van, Université de La Rochelle, 2011-2014 Completed habilitations – Xavier Granier, 2009 – Pascal Desbarats, 2010 – Martin Hachet, 2010 – Ivo Ihrke, 2012 – Marie Beurton-Aimar, 2014 F.2.2 Visibility and attractivity Editorial and organizational activities Steering committee (international) – ASSMBM, 2007– CBMI, 2012 – IPTA, 2012 – GCH, 2014 – IEEE 3DUI, 2014 Steering committee (national) – TSI, 2012Program committee (international) – Eurographics, 2008, 2009, 2011, 2014 – Graphics Interface, 2009 – IEEE 3DUI, 2009, 2010 – CBMI 2009 - 2014 – IEEE SMI, 2009, 2010 – ISVC, 2009, 2010, 2011 – Web3D, 2009, 2010, 2011, 2012, 2013 – ACM NPAR, 2010, 2011 – ACM Siggraph, Asia, 2010 – Graphics Interface, 2010 269 270 – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS CBTV, 2010 Eurographics - CulturalHeritage, 2011 Eurographics - STAR, 2011 Eurographics, 2011 ICMI, 2011 MASmms - ECAL - 2011 PRN, 2011-2014 IEEE SCI, 2011 IEEE VR, 2011, 2013 3DCHI, 2012 Grand challenge on BCI at ICMI, 2012 ECAI, 2012 ICISP, 2012, 2014 ICMI, 2012 IPTA, 2012 MMM 2012, 2014 Siggraph Asia Tech. Brief & Posters 2012 and 2013 ACII, 2013 CVPR, 2013, 2014 IEEE ICCV, 2013 ICCP, 2013,2014 ICMR’2013 CCD, 2013 BMVC, 2013 3DPVT, 2013 EGSR, 2013 IEEE SCI, 2013 Pacific Graphics, 2013 HPG, 2013 WSCG, 2013 BCI, 2014 ELS, 2014 Expressive, 2014 ECCV, 2014 GCH 2014 CCD, 2014 IEEE ICIP, 2014 SUI, 2014 SPIE Photonics Asia, 2014 Siggraph Asia E-Tech, 2014 Program committee (national) – Journées de l’Association Française d’Informatique Graphique, 2009, 2010 – Reconnaissance de Formes et Intelligence Artificielle, 2012, 2014 – GRETSI 2013, 2014 Presidence of program committee (international) – IEEE CAD Graphics, Yellow Mountain, 2009 F.2. IMAGE AND SOUND – IEEE 3DUI, Symposium on 3D User Interfaces, 2010 and 2011 – ECCV, Workshop Information Fusion for Computer Vision, 2012 – TIS, Tangible Interaction Studio, 2013 Presidence of program committee (national) – UBIMOB, 2012 – ERGOIA, 2014 Organizing committee (conferences, seminaries, schools...) (international) – Joint Virtual Reality Conference, Poster co-chair, 2009 – Joint Virtual Reality Conference, Demonstration co-chair, 2010 – ACM MM, Video Track co-chair, 2010 – PRISM ITN workshop, 2013 – Cross-Cultural research on Speech Communication and Second Language learning processing, 2013 – Imaging New Modalities workshop, 2013 – Context-based Spoken Japanese Language, 2014 Organizing committee (conferences, seminaries, schools...) (national) – Workshop on MAS in biology, 2008-2010 – Sino-French Workshop, Huangshan (China), 2009 – JST-CNRS Workshop, Bordeaux, 2009 – IHM, Nice, 2011-2014 – Neurocomp 2011 autumn school on Brain-Computer Interfaces – ErgoIHM, Biarritz, 2012 – CIFED, 2012 – Document workshop, 2012 – Signal-Image seminaries, 2012-2014 – JBAMI, 2014 Presidence of organizing committee (international) – Workshop Information Fusion in Computer Vision (ECCV), 2012 – MIRH (ACM MM), 2013 Presidence of organizing committee (national) – IHM, 2013 Journal editorial board (international) – Journal on Multimodal User Interfaces, Springer – Engineering of Mixed Reality Systems, Human-Computer Interaction Series, Springer – Signal Processing: Image Communication, Elsevier – Multimedia Tools and Applications, Springer Journal editorial board (national) – Technique et Science Informatiques (TSI), Lavoisier – Technique et Science Informatiques (TSI), Special Issue on Ambiant Informatics, Lavoisier, 2012. Research animation (international) Research animation (national) – Member of board of French Association on Virtual Reality (AFVR),2012– Member of board of Institute of Optics Graduate School (IOGS),2013– Member of board of French Association on Human-Computer Interface (AFIHM), 2013– Member of workgroup 4.6 CSAME, GDR I3, CNRS, 2005-2010 – Creation and animation of the TANGINT/FR workgroup, AFIHM, 2011– Member of Living Lab workgroup, AFIHM, 2011-2013 – GDR - STIC Santé, Resp. Theme A – GDR - ISIS, Resp. Theme B 271 272 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Service as expert or evaluator Presidence of expert committee (international) Presidence of expert committee (national) – Member of Steering Committee of ANR ContInt program, 2010-2013 – Member of MNEN experts group for the Computer and Digital Sciences program, 2010-2011 Membership in expert committee (international) – expertise de dossiers pour la promotion au grade de professeur aux universités de ’Auckland ( NZ) et Beer Sheva (Israel). Membership in expert committee (national) – Member of Legal and Ethical Risks Expert Committee of INRIA, 2012– Member of ANR CONTINT evaluation committee, 2011, 2013, 2014 – Member of AERES evaluation committee, 2010, 2014 Individual expert (reviewer) (international) – Expert for EACE (European Commission), 2011-2013 – Expert for European Commission, 2012– Expert for CHIST-ERA, ICT, european program, 2013 – Expert for National Science and Engineering Council of Canada, 2013 – Expert for United States-Isreal Binational Science Foundation, 2013 – Expert for Hasler Foundation (Bern, Suisse), 2013 – Expert for the Quebec Research Found - Nature and Technology (FRQNT), 2013 – Expert for Israel Science Foundation, 2014 – Expert for A*STAR joint council Organization, Singapore 2014 Individual expert (reviewer) (national) – Expert for ANR, EMCO, 2009, 2011 – Expert for ANR, Generic and JCJC, 2009-2013 – Expert for ANR, CONTINT, 2010 – Expert for Finances ministry, 2011-2014 – Expert for ARSLA, 2012 – Expert for DIGITEO, 2014 – Expert for PEPS CNRS-Inria-Inserm, 2012,2013 – Expert for Inria associate team program – Scientific expert for CIFRE No 2012/0827 – Scientific expert for CIFRE No 2013/0813 Presidence of selection board – Presidence of selection board for IR0 Inria, 2013 Membership in selection board – Member of selection board for IE Inria, 2009 – Member of selection board for CR2 Inria, 2010, 2012-2013 – Member of selection board for CR1 Inria, 2010-2012 – Member of selection board for DR Inria, 2014 – Member of selection board for CR CNRS, 2012, 2013, 2014 – Member of selection board for assistant professor, Univ. Rennes, 2011 – Member of selection board for assistant professor, Univ. Bordeaux, 2013, 2014 – Member of selection board for IR CNRS/Univ. Toulouse, 2009 – Member of selection board for IR INRA F.2. IMAGE AND SOUND Membership in prize jury – Member of jury for ANR Prize, 2013 – Member of jury for Inria/Académie des Sciences Prize, 2012– Member of jury for Best poster award, International BCI conference, Graz, Austria, 2011 – Member of jury for Best poster award, BBCI workshop on Neurotechnologies, Berlin, Germany, 2012 – Member of jury for Best demonstration and best paper awards, IHM, 2013 – Member of jury for PhD AFIA Prize, 2014 Reviewing of PhD or habilitation (international) – S. Carrino, University of Fribourg, Switzerland, 2014 – D. Devlaminck, Ghent University, Belgium, 2011 – F. J. Velasco Alvarez, Malaga University, Spain, 2012 – J. M. Antelis, University of Zaragoza, Spain, 2013 – M. K. Goel, EPFL, Switzerland, 2013 – M. Duvinage, University of Mons, Belgium, 2014 – I. Gonzalez-Diaz, Univ. de Madrid, 2011 Reviewing of PhD or habilitation (national) – X. Granier, University of Bordeaux, 2009 – L. Barthe, University of Toulouse, 2011 – R. Chaines, University of Lyon, 2011 – I. Ihrke, University of Bordeaux, 2012 – F. Precioso, ENSEA, 2010 – P. Bertolino, Grenoble, 2012 – J.-F. Omhover, Lab CPI - Paris, 2014 – C. de Rousier, University of Grenoble, 2011 – U. Zaldivar, Versailles, LR , 2009 – B. Micoud , Lyon, LIRIS, 2009 – R. Lerbour , Rennes, IRISA, 2009 – T. Stein, Grenoble, LIG, 2010 – A. Rahajaniaina, Toulouse, IRIT, 2010 – M. Veit, Strasbourg, LSIIT, 2010 – N. Esnault, Rennes, IRISA, 2011 – P.E. Landes, Grenoble, LIG, 2011 – R. Morin, Toulouse, IRIT, 2011 – S. Kubicki, Valenciennes, LAMIH, 2011 – P. Thebault, Paris, ENSAM, 2013 – L. Bennes , Belfort, 2013 – F. Delomier , Lyon, Ecole Centrale, 2013 – E. Sorita, Bordeaux 2, 2013 – E. Chapoulie, Nice , 2014 – J. Gilliot, University of Lille, 2014 – M. Haydard, University of Evry Val d’Essonne, 2011 – A. Letienne, Inst Galilée, 2010 – B. Luvison, Univ. Cl-Ferrand, 2010 – Y. Li, Eurecom, 2012 – C. Zhu, ECL, 2012 – Z. Kuala, University of Nantes, 2013 273 274 – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS M. Redi, Eurecom, 2013 S.T. Strat, LIstic, 2013 D.-Ph. Vo, Telecom Paris Tech, 2014 A. Aissaoui, 2014 Membership of PhD/habilitation committee (international) – Boris Reuderink, Twente University, the Netherlands, 2011 – Daniel Szolgay, UPPK University, Budapest, Hungary, 2011 Membership of PhD/habilitation committee (national) – X. Granier, Bordeaux, LaBRI, 2009 – F. Ababsa, Ivry, IBISC, 2010 – T. Boubekeur, Orsay, Mines Paristech, 2012 – T. Duval, Rennes, IRISA, 2012 – I. Ircke, Bordeaux, LaBRI, 2012 – J.M. Cieutat, Bidart, ESTIA, 2013 – B. Raffin, Grenoble, LIG, 2009 – G. Moreau, Nantes, ECN, 2009 – A. Lécuyer, Rennes, IRISA, 2010 – C. Essert, Strasbourg, LSIIT, 2011 – E. Klinger, Bordeaux 2, Sciences Co, 2013 – F. Dècle, Univ. Bordeaux, 2009 – S. Knoedel, Univ. Bordeaux, 2009 – G. Rivière, Bidart, ESTIA,2009 – R. Pacanowski, Univ. Bordeaux, LaBRI, 2009 – A. Clay, Bidart, ESTIA, 2009 – G. Wallet, Univ. Bordeaux, LSC, 2009 – J. Glisse, Univ. Jussieu Paris 6, 2009 – J. Baril, Univ. Bordeaux, LaBRI, 2010 – M. Charbonneau, Univ. Bordeaux, LSC, 2010 – Z. Drey, Univ. Bordeaux, LaBRI, 2010 – I. Zendjebil, Univ. Ivry, IBISC, 2010 – F. Berthaut, Univ. Bordeaux, LaBRI, 2010 – L. Aguerreche, INSA Rennes, 2010 – R. Skowronski, Bidart, ESTIA, 2011 – O. Hugues, Bidart, ESTIA, 2011 – S. Videau, INSA Toulouse, 2011 – S. Tripodi, Univ. Brest, 2011 – F. Larrue, Univ. Bordeaux 2, 2011 – A. Martinet, Univ. Lille 1, 2011 – S. Hilaire, INSA Rennes, 2011 – L. Georges, INSA Rennes, 2012 – A. Cohé, Univ. Bordeaux, 2012 – C. Fleury, Univ. Rennes, IRISA, 2012 – S. He, Nantes, Ecole Centrale, 2012 – M. Dejos, Univ. Bordeaux 2, Sciences Co, 2012 – N. Mellado, Univ. Bordeaux 1, LaBRI, 2012 – A. Cohé, Univ. Bordeaux 1, LaBRI, 2012 F.2. IMAGE AND SOUND – – – – – – – – – 275 A. Bursiuc, Mines ParisTech, 2012 A. Bernhardt, Grenoble, 2013 V. Todoroff, ONERA Toulouse, 2013 A.-A. Oumarou, Univ. Rennes, 2013 J. Laviole, Univ. Bordeaux 1, LaBRI, 2013 P. Arvin-Pala, Univ. Bordeaux 2, 2013 R. Trachel, Univ. Nice-Sophia Antipolis, 2014 A. Newson, Telecom Paritech & Technicolor Research Rennes, 2014 E. Chapoulie, Univ. Nice-Sophia Antipolis, 2014 Scientific collaborations Projects (international) – X-media, Demcare, DOTNAC FP7 European projects – V-MusT.net, FP7 NoE, “Virtual Museum Transnational Network” – PhDs co-supervision, Univ. PKKU, Budapest, Hongrie – PhDs co-supervisions, Univ. de Sfax, Tunisie – PhDs co-supervision, Univ. de Bristol, UK – Ph.D co-supervision, McGill University, Canada – Collaboration with Univ. of Shieffeld – Collaboration with Univ. of Ljubliana – Collaboration with ITI-CERTH (Greece) – Collaboration with DCU (Ireland) – Collaboration with LTU (Sweden) – Collaboration with Lomonosov University (Moscow) – JST - CNRS Project, CNRS, “Improving the VR experience”, LSSIIT & Bunraku - IRISA & Tokyo University & Keio University & Osaka University, 2008-2011 – Associated Team: Bird, INRIA-DREI, “Interactions between Real and Virtual Worlds”, Bunraku - IRISA & State Key Labo of CAD&CG, 2008-2011, Projects (national) – ALTA, ANR, “Analysis of Light Transport and Applications”, 2011-2015 – PEPII - Institut Jacques Monod, 2010-2012 – ANR -Tomatoflux - INRA, 2007-2010 – ANR, GREYC,Caen – ANR, LORIA, Nancy – ANR, Artémis, Paris – ANR Digicoc, BNF, Paris – ANR Digicoc, Gest-form, Bordeaux – ANR Digicoc, L3I Univ. La Rochelle – ANR Digicoc, LITIS Univ. Rouen – ANR Digicoc LI Univ.Tours – ANR Digidoc, Arkhênum – ANONYMA et ACORSEN projects, TELEM (Université Bordeaux Montaigne), Bordeaux, 2013– IPB Project, IMS, 2012 – IPB Project, IMB, 2012 – ANR, SeARCH, 2009-2013 – ANR DIADEMS, 2012-2015 276 – – – – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS ANR DREAM FUI SIMC 2000, 2011-2014 ANR Instinct, 2009-2012 PIA Villes transparentes, 2012-2014 ANR Partge, 2007-2010 ANR DALIA, 2007-2010 ANR Icos-HD,2006-2010 ANR IMMED, 2010-2014 ANR TACIT, 2011-2015 Aquitaine Council ACORSENS, 2013-2016 PEPS IDEX/CNRS ANONYMA, 2013-2014 Idex Project SEDUCTION, 2014-2015 Idex Project TRAIL HR-DTI ANR-10-LABX-57, 2013-2016 Joint publications (international) – University of Bristol – Université of Lisboa – University of Weimar – Brooks University, Oxford – M. Nakano, UNAM, Mexico – O. Hadar, Ben Gurion Nagev University – B. Lovell, Queensland University, – C. Ben Amar, Sfax University – V. Caselles, Pompeu Fabra University, Barcelona, Spain – G. Facciolo, Pompeu Fabra University, Barcelona, Spain – P. Gargallo, Barcelona Media, Barcelona, Spain – A. Hervieu, Barcelona Media, Barcelona, Spain – J. V. Manjon, Universitat Politècnica de València, Valencia, Spain – L. Martí-Bonmatí, Hospital Quirón Valencia, Valencia, Spain – M. Robles, Universitat Politècnica de València, Valencia, Spain – R. Sadek, Pompeu Fabra University, Barcelona, Spain – L. Concha, Institute of Neurobiology, National Autonomous University of Mexico, Querétaro, México – K. Leung, University College of London, London, UK – D. Rueckert, Imperial College London, London, UK – J. V. Halnal, King’s College London, London, UK – R. Ostergaard, University of Aalborg, Aalborg, Denmark – J.-S. F. Eskildsen, Aarhus University, Aarhus, Denmark – D. L. Collins, McGill University, Montreal, Canada – D. Arnold, McGill University, Montreal, Canada – V. Fonov, McGill University, Montreal, Canada – E. Ruthazer, McGill University, Montreal, Canada – B. Aubert-Broche, McGill University, Montreal, Canada – S. Stifani, McGill University, Montreal, Canada – N. Stifani, McGill University, Montreal, Canada – J. C. Pruessner, Douglas Mental Health University, Montreal, Canada – R. Del Maestro, Brain Tumour Research Centre, Montreal, Canada – M. Descoteaux, SCIL, Sherbrook, Canada – I. Reinertsen, The Foundation for Scientific and Industrial Research, Norway F.2. IMAGE AND SOUND – M. Styner, UNC Chapel Hill, US – A. Buades, Université Paris Descartes, Paris, France Joint publications (national) – BNF, Paris, France – UMR619 Biologie du Fruit INRA bordeaux – P. Hellier, INSERM: U746 – CNRS : UMR6074 – INRIA – Univ. Rennes 1, Rennes, France – X. Morandi, INSERM: U746 – CNRS : UMR6074 – INRIA – Univ. Rennes 1, Rennes, France – C. Barillot, INSERM: U746 – CNRS : UMR6074 – INRIA – Univ. Rennes 1, Rennes, France – C. Haegelen, INSERM: U746 – CNRS : UMR6074 – INRIA – Univ. Rennes 1, Rennes, France – P. Jannin, INSERM: U746 – CNRS : UMR6074 – INRIA – Univ. Rennes 1, Rennes, France – D. Garcia-Lorenzo, L’Institut du Cerveau et de la Moelle Épinière, Paris, France – M. Allard, INCIA, Bordeaux, France – G. Catheline, INCIA, Bordeaux, France – B. Hiba, RMSB, Bordeaux, France – O. Periot, INCIA, Bordeaux, France – J-F. Aujol, IMB, Bordeaux, France – N. Papadakis, IMB, Bordeaux, France – O. Lézoray, Univ. Caen, France – A. Elmoataz, Univ. Caen, France – X. Desquesne, Univ. Caen, France – M. Hidane, Univ. Caen, France – V. Roullier, Univ. Caen, France – S. Bougleux, Univ. Caen, France – R. Mégret, IMS, Bordeaux, France – H. Coqueugniot, PACEA, Bordeaux, France – O. Dutour, PACEA, Bordeaux, France – P. Mounaix, LOMA, Bordeaux, France Other collaborations (international) Other collaborations (national) – IMB, Bordeaux – Lysic, Univ. Bretagne Occidentale, Brest – IBISC, Univ. Evry. – BiO3P INRA, Rennes – V. Lespinet-Najib, IMS, Bordeaux, France – C.-A. Deledalle, IMB, Bordeaux, France – C. Dossal, IMB, Bordeaux, France – P. Arias, Pompeu Fabra University, Barcelona, Spain Research visitors (international) – Dr. Zhang Hongxin, State Key Lab of CAD & CG - Zhejiang University, China – Vincent Oria, NJIT, USA – O. Hadar, Ben Gurian Nagev University, Israel – P. Arias, Pompeu Fabra University, Barcelona, Spain – J. V. Manjon, Universitat Politècnica de València, Valencia, Spain – D. L. Collins, McGill University, Montreal, Canada Research visitors (national) 277 278 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – A. Newson, Telecom Paritech & Technicolor Research, Rennes, France Research visits (international) – Veszprem University, Hungary – NJIT, USA – Carnegie Melon, USA – Klagenfurt University Austria , – Sussex University, UK – Sfax University, Tunisia – Imperial College London, UK – University of Valencia, Spain – Children’s National Medical Center, Washington, USA – MacGill University, Canada Research visits (national) – Technicolor Research, Rennes, France F.2.3 Involvement with social, economic and cultural actors Collaborations with the industry Industrial contracts – Telespazio (Contract – Audemath (CIFRE) – Adasis (CIFREx2) – Mirane (CIFRE) – Widmee (ADERA) – gestform (CIFRE) Contributions to professional journals and overview publications – Les réseaux biochimiques", Systemics Biology Standards,Chapter 7 – Visual information Indexing and Retrieval, Springer, 2013 – Information Fusion in Computer vision, Springer, 2014 Reports for decision makers – Report for the Bretagne Regional Council – Report for Montpellier Regional Council Contributions to standards Collaborations outside of universities – Audemath – Mirane – Adasis – Widmee – VisionScope – INA – Technicolor Research – GE France Start-ups – SIMBALS F.2. IMAGE AND SOUND 279 General audience actions Learned society, federation (international) Learned society, federation (national) Scientific popularization, dissemination of scientific culture – Bordeaux, Fête de la science, "Immersive Music", 2009 – Bordeaux, LaBRI - Multimedia Thursdays, "Immersive Live-looping", 2010 – Basque County, TEDx, "L’interaction tangible", 2010 – Paris, Palais de la Découverte, "Un chercheur, une manip", 2011 – Paris, Cité des Sciences - "Utiliser son activité cérébrale pour contrôler un ordinateur : le point sur les interfaces cerveau-ordinateur", "Les Machines peuvent-elles imiter le cerveau humain ?" conference, 2011 – Bordeaux, Fête de la science, "Navidget", 2011 – Bordeaux, Cap-Sciences, "Numériquement votre", 2011 – Talence, Inria Uni-thé ou café, "Quand le cerveau prend la main", 2011 – Toulouse, Déjeuner sur Web, "Les Interfaces cerveau-ordinateur", 2011 – Bruxelles, Musée Royal, "Du Nil à Alexandrie. Histoires d’eaux" exposition, 2012 – Bordeaux, "Ad Arenas" exposition, display of the 3D print of Palais Gallien, 2012 – Bordeaux, Fête de la Science, “Devenez les Indiana Jones de la 3D”, 2012 – Gotheborg (Sweden), Science Festival, "Mind-Shooter », 2012 – Amsterdam, Allard Pierson Museum, "Eternal Egypt" exposition, 2013 – Basque Country,TedX, "l’archéologue du futur", 2013 – Paris, Cité des Sciences, "Utiliser son cerveau pour contrôler une machine", 2013 – Talence, Nuit des chercheurs, "Demonstration d’interfaces cerveau-ordinateur", 2013 – Bordeaux, Cap-Sciences, Cervorama exposition, "Le cerveau au commandes", 2013 – Bordeaux, "Interfaces cerveau-ordinateur et homme augmenté" exposition, "Neurotechnologies: vers un homme augmenté?" conference, 2013 – Télématin, France 3, IMMED and Demcare projects, November 2 2013 – The Devil Is In The Details: Predicting Alzheimer’s, ZoomerMag, Sept 2013 Publications for large audience – P. Guitton, "Ces surfaces qui nous entourent", Interstices, 2009 – P. Guitton, "Une bonne interface, c’est une interface conviviale", Interstices, 2010 – N. Couture. "La Réalité augmenté" ,"La gazette" d’Audiens, page 15, 2010 – P. Reuter, N. Mellado, X. Granier, I. Hairy, R. Vergnieux, N. Couture, "Semi-automatic 3D Acquisition and Reassembly of Cultural Heritage: The SeARCH Project". ERCIM News 86 : 12-13, 2011 – F. Dufour, M. Hachet, G. Giraudon, P. Guitton, T. Vieville, "Comment utiliser le 3.0 pour que notre MINF soit ubiquitaire, participatif et attractif ?", Vers un musée de l’informatique et de la société numérique, Paris, I. Astic editor, 2012 – M. Hachet, B. Martin, "Interaction Hommes-Machines : une histoire de 30 ans" Inriality, 2013 – M. Hachet, C. Castro, "Arrêtez de regarder la 3D, prenez-en le contrôle !" Inriality, 2013 – M. Hachet, "Quand la réalité virtuelle rencontre les surfaces tactiles", Interstices, 2013 – F. Lotte, "Idée reçue : Grâce au numérique, on peut lire dans les pensées", Interstices, 2013 – Interview, France Inter, ANR SeARCH, 2012 – 2 Interviews for 3dvf.fr website, 2012 – Le Monde and Science Magazine, Articles on ANR SeARCH project, 2012 – New Scientist, FotoIntern, Gizmodo, articles on KaleidoCam project, 2013 – Computational Plenoptic Imaging, DAGM tutorial, organizer, 2013 – Computational Fabrication and Display of Material Appearance, EG STAR, 2013 – Optimization Techniques in Computer Graphics, EG Tutorial, organizer, 2014 280 F.2.4 – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Master, predoc and postdoc researchers Joao-Pedro Berti-Ligabo, master internship, 2014 Dennis Wobrock, master internship, 2014 Morgane Sueur, master internship, 2014 Julia Schumacher, master internship, 2014 Jean Bui-Quang, master internship, 2014 Damien Clergeuad, master internship, 2014 Aurélien Appriou, master internship, 2014 Camille Jeunet, master internship, 2013 Leonard Pommerau, master internship, 2013 Pierre-Marie Plans, master internship, 2013 Thomas Hume, master internship, 2012 Jonathan Aceituno, master internship, 2011 Arash Kian, master internship, 2009 Olivier Augerau, master internship, 2009 Samuel Hurel, master internship, 2009 Flavio Bertini, master internship, 2014 Asier Marzo, master internship, 2014 Nicelleta Caramia, master internship, 2013 Jacek Jankowski, master internship, 2012-2014 Florian Larrue, master internship, 2012-2013 Christian Mühl, master internship, 2013-2014 Nicolas Mellado, master internship, 2009 Simon Boyé, master internship, 2009 Evans Bohl, master internship, 2011 Boris Raymond, master internship, 2012 Loïs Mignard-Debise, master internship, 2013 Georges Nader master internship, ,2013 Brett Ridel, master internship, 2013 Michael Morgan, master internship, 2013 Thao. Nguyen, master internship, 2013 Hien Tran The, master internship, 2012 Navailles Jean Paul, master internship, 2011 Tung. Nguyen, master internship, 2009 Hai Minh N., master internship, 2009 S Lorian, master internship, 2001 S. Chassagnes, master internship J. Hitier, master internship F. Ben Messaoud, master internship S. Lorient, master internship M. Flocard, master internship X. Pan, master internship S. Saint-Jean, master internship R. Giraud, master internship G. Motyl, master internship Lucas Ammann, postdoc, 2010-2011 F.2. IMAGE AND SOUND – – – – – – Hichem Barki, postdoc, 2011-2012 Ramon Hegedüs, postdoc, 2013-2014, L. Paulhac, postdoc, 2011-2012 M. Mizotin, postdoc I. Gonzales - Diaz, postdoc G. Sargent, postdoc 281 282 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS F.3. FORMAL METHODS F.3 F.3.1 283 Formal Methods Scientific production Publications Peer-reviewed journals (international) [RI1] W. Abdou, A. Henriet, C. Bloch, D. Dhoutaut, D. Charlet, and F. Spies, Using an evolutionary algorithm to optimize the broadcasting methods in mobile ad hoc networks, Journal of Network and Computer Applications, 34 (2011), pp. 1794–1804. [RI2] A. Akhavi, I. Klimann, S. Lombardy, J. Mairesse, and M. Picantin, On the finiteness problem for automaton (semi)groups, International Journal of Algebra and Computation, 22 (2012), pp. 1250052.1–1250052.26. [RI3] L. Alberucci and A. Facchini, The modal mu-calculus hierarchy on restricted classes of transition systems., Journal of Symbolic Logic, 74 (2009), pp. 1367–1400. [RI4] L. Alberucci and A. Facchini, On modal mu-calculus and Gödel-Löb logic, Studia Logica, 91 (2009), pp. 145–169. [RI5] J. Almeida, J.-C. Costa, and M. Zeitoun, Closures of regular languages for profinite topologies, Semigroup Forum, (2014), pp. 1–21. [RI6] J. Almeida, J.-C. Costa, and M. Zeitoun, Iterated periodicity over finite aperiodic semigroups, European Journal of Combinatorics, 37 (2014), pp. 115–149. [RI7] M. Amblard, A. Lecomte, and C. Retoré, Categorial minimalist grammars: From generative syntax to logical form, Linguistic Analysis, 36 (2010), pp. 273–306. [RI8] M. Amblard and C. Retoré, Partially commutative linear logic and Lambek calculus with product: natural deduction, normalisation, subformula property, Logics and their applications (IfCOLog), 1 (2014), pp. 53–94. [RI9] P.-Y. Angrand, S. Lombardy, and J. Sakarovitch, On the number of broken derived terms of a rational expression, Journal of Automata, Languages and Combinatorics, 15 (2012), pp. 27–51. [RI10] C. Bassac, B. Mery, and C. Retoré, Towards a type-theoretical account of lexical semantics, Journal of Logic Language and Information, (2010), pp. 229–245. [RI11] F. Bassino, A. Martino, C. Nicaud, E. Ventura, and P. Weil, Statistical properties of subgroups of free groups, Random Structures and Algorithms, 42 (2013), pp. 349–373. [RI12] W. Ben Jaballah, M. Conti, M. Mosbah, and C. E. Palazzi, Fast and secure multihop broadcast solutions for intervehicular communication, IEEE Transactions on Intelligent Transportation Systems, PP (2013), pp. 1 – 18. [RI13] M. Benedikt, G. Puppis, and C. Riveros, Bounded repairability of word languages, Journal of Computer and System Sciences, 79 (2013), pp. 1302–1321. [RI14] J. Bernet and D. Janin, Une étude des jeux distribués, Technique et Science Informatiques (TSI), 32 (2013), pp. 1007–1041. [RI15] F. Berthaut, D. Janin, and B. Martin, Advanced synchronization of audio or symbolic musical patterns: An algebraic approach, International Journal of Semantic Computing, 6 (2012), pp. 409–427. [RI16] A. Blumensath and B. Courcelle, On the monadic second-order transduction hierarchy, Logical Methods in Computer Science, 6 (2010), pp. 1–28. 284 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI17] A. Blumensath and B. Courcelle, Monadic second-order definable graph orderings, Logical Methods in Computer Science, 10 (2014), pp. 1–36. [RI18] M. Bojanczyk, C. David, A. Muscholl, T. Schwentick, and L. Segoufin, Two-variable logic on data words, ACM Transactions on Computational Logic, 12 (2011), p. 27. [RI19] M. Bojanczyk, A. Muscholl, T. Schwentick, and L. Segoufin, Two-variable logic on data trees and XML reasoning, Journal of the ACM, 56 (2009), pp. 1–48. [RI20] M. Bojanczyk, H. Straubing, and I. Walukiewicz, Wreath products of forest algebras, with applications to tree logics, Logical Methods in Computer Science, 8 (2012), pp. 1–39. [RI21] B. Bollig, P. Gastin, B. Monmege, and M. Zeitoun, Pebble weighted automata and weighted logics, ACM Transactions on Computational Logic, 15 (2014), p. 15. [RI22] R. Bonnet, A. Finkel, J. Leroux, and M. Zeitoun, Model checking vector addition systems with one zero-test, Logical Methods in Computer Science, 8 (2012), p. 11. [RI23] D. Bresolin, A. Montanari, and G. Puppis, A theory of ultimately periodic languages and automata with an application to time granularity, Acta Informatica, 46 (2009), pp. 331–360. [RI24] T. Brihaye, V. Bruyère, J. De Pril, and H. Gimbert, On subgame perfection in quantitative reachability games, Logical Methods in Computer Science, (2013). [RI25] V. Bruyère, O. Carton, and G. Sénizergues, Tree automata and automata on linear orderings, RAIRO-Theor. Inf. Appl., 43 (2009), pp. 321–338. [RI26] M.-P. Béal, S. Lombardy, and D. Perrin, Embeddings of local automata, Illinois Journal of Mathematics, 54 (2010), pp. 155–174. [RI27] F. Carrere, Inductive computations on graphs defined by clique-width expressions, RAIRO - Theoretical Informatics and Applications, 43 (2009), pp. 625–651. [RI28] P. Castéran and V. Filou, Tasks, types and tactics for local computation systems, Studia Informatica Universalis, 9 (2011), pp. 39–86. [RI29] D. Cao, R. Castanet, P. Felix, and K. Chiew, An approach to automated runtime verification for timed systems: Applications to web services, J. of Software, 7 (2014), pp. 1338–1350. [RI30] A. Carayol, C. Loeding, D. Niwinski, and I. Walukiewicz, Choice functions and wellorderings over the infinite binary tree, Central European Journal of Mathematics, 8 (2010), pp. 662–682. [RI31] B. Courcelle, Linear delay enumeration and monadic second-order logic, Discrete Applied Mathematics, 157 (2009), pp. 2675–2700. [RI32] B. Courcelle, On the model-checking of monadic second-order formulas with edge set quantifications., Discrete Applied Mathematics, 160 (2012), pp. 866–887. [RI33] B. Courcelle, Clique-width and edge contraction, Information Processing Letters, 114 (2014), pp. 42–44. [RI34] B. Courcelle and I. Durand, Automata for the verification of monadic second-order graph properties, Journal of Applied Logic, 10 (2012), pp. 368–409. [RI35] B. Courcelle, C. Gavoille, and M. M. Kanté, Compact labelings for efficient first-order modelchecking, Journal of Combinatorial Optimization, 21 (2011), pp. 19–46. [RI36] B. Courcelle and M. M. Kanté, Graph operations characterizing rank-width, Discrete Applied Mathematics, 157 (2009), pp. 627–640. [RI37] B. Courcelle and A. Twigg, Constrained-path labellings on graphs of bounded clique-width, Theory of Computing Systems, 47 (2010), pp. 531–567. F.3. FORMAL METHODS 285 [RI38] J.-M. Couvreur, D. Poitrenaud, and P. Weil, Branching processes of general petri nets, Fundamenta Informaticae, 122 (2013), pp. 31–58. [RI39] H. Collavizza, N. Le Vinh, O. Ponsini, M. Rueher, and A. Rollet, Constraint-based BMC: A backjumping strategy, International Journal on Software Tools for Technology Transfer (STTT), (2012), pp. 1–19. [RI40] J. Daligault, D. Gonçalves, and M. Rao, Diamond-free circle graphs are Helly circle, Discrete Mathematics, 310 (2010), pp. 845–849. [RI41] B. Derbel, M. Mosbah, and A. Zemmari, Sublinear fully distributed partition with applications, Theory of Computing Systems, 47 (2010), pp. 368–404. [RI42] V. Diekert, M. Kufleitner, and P. Weil, Star-free languages are Church-Rosser congruential, Theoretical Computer Science, 454 (2012), pp. 129–135. [RI43] I. Durand and G. Sénizergues, Bottom-up rewriting for words and terms, Journal of Symbolic Computation, (2014), pp. 1–40. [RI44] I. Durand and G. Sénizergues, Bottom-up rewriting for words and terms, Journal of Symbolic Computer Science, to appear (2014), pp. 1–41. [RI45] Z. Esik and P. Weil, Algebraic characterization of logically defined tree languages, International Journal of Algebra and Computation, 20 (2010), pp. 195–239. [RI46] J. Ferté, N. Marin, and G. Sénizergues, Word-mappings of level 2, Theory of Computing Systems, 54 (2013), pp. 111–148. [RI47] A. Fontaine, Y. Métivier, J. M. Robson, and A. Zemmari, Optimal bit complexity randomised distributed mis and maximal matching algorithms for anonymous rings, Information and Computation, 233 (2013), pp. 32–40. [RI48] E. Garnaud, S. Maabout, and M. Mosbah, Les dépendances fonctionnelles pour la sélection de vues dans les cubes de données, Journal of Decision Systems, 21 (2012), pp. 71–91. [RI49] E. Garnaud, S. Maabout, and M. Mosbah, Functional dependencies are helpful for partial materialization of data cubes, Annals of Mathematics and Artificial Intelligence, (2013), pp. 1–30. [RI50] E. Garnaud, S. Maabout, and M. Mosbah, Functional dependencies are helpful for partial materialization of data cubes, Annals of Mathematics and Artificial Intelligence, (2013), pp. 1–20. [RI51] O. Gauwin, J. Niehren, and S. Tison, Queries on XML streams with bounded delay and concurrency, Information and Computation, 209 (2011), pp. 409–442. [RI52] P. Gastin, N. Sznajder, and M. Zeitoun, Distributed synthesis for well-connected architectures, Formal Methods in System Design, 34 (2009), pp. 215–237. [RI53] K. Gerdes, L. Clémént, and R. Marlet, A grammar correction algorithm, in Formal grammar, vol. 5591 of LNCS, 2011, pp. 47–63. [RI54] H. Gimbert and W. Zielonka, Blackwell optimal strategies in priority mean-payoff games, International Journal of Foundations of Computer Science, 23 (2012), pp. 687–711. [RI55] J. Gillibert and C. Retoré, Category theory, logic and formal linguistics: some connections, old and new, Journal of Applied Logic, 12 (2014), pp. 1–13. [RI56] D. Gonçalves, A. Pinlou, M. Rao, and S. Thomassé, The domination number of grids, Siam Journal on Discrete Mathematics, 25 (2011), pp. 1443–1453. [RI57] F. Herbreteau and B. Srivathsan, Coarse abstractions make Zeno behaviours difficult to detect, Logical Methods in Computer Science, 9 (2013). 286 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI58] F. Herbreteau, B. Srivathsan, and I. Walukiewicz, Efficient emptiness check for timed Büchi automata (extended version), Formal Methods in System Design, 40 (2012), pp. 122–146. [RI59] A. Heussner, J. Leroux, A. Muscholl, and G. Sutre, Reachability analysis of communicating pushdown systems, Logical Methods in Computer Science, 8 (2012), pp. 1–20. [RI60] D. Janin, Vers une modélisation combinatoire des structures rythmiques simples de la musique, Revue Francophone d’Informatique Musicale, 2 (2012). [RI61] D. Janin, On labeled birooted tree languages: algebras, automata and logic, Journal of Information and Computation, (2014). [RI62] M. Jarvisalo, D. Le Berre, O. Roussel, and L. Simon, The international SAT solver competition, Artificial Intelligence Magazine, (2012). [RI63] M. Jarvisalo, D. Le Berre, O. Roussel, and L. Simon, The international SAT solver competitions, Artificial Intelligence Magazine (AI Magazine), 1 (2012), pp. 89–94. [RI64] S. Krishna and A. Muscholl, A quadratic construction for Zielonka automata with acyclic communication structure, Theoretical Computer Science, 503 (2013), pp. 109–114. [RI65] M. Kufleitner and P. Weil, On the lattice of sub-pseudovarieties of DA, Semigroup Forum, 81 (2010), pp. 243–254. [RI66] M. Kufleitner and P. Weil, On logical hierarchies within FO2-definable languages, Logical Methods in Computer Science, 8 (2012), pp. 1–30. [RI67] A. Lefeuvre and N. Vinogradova, Hétérogénéité et extraction d’information factuelle dans un corpus de récits de voyage, Langages, 3 (2012). [RI68] J. Leroux, Vector addition system reachability problem: A short self-contained proof, Logical Methods in Computer Science (LMCS), 6 (2010), pp. 1–25. [RI69] J. Leroux, Vector addition system reversible reachability problem, Logical Methods in Computer Science, 9 (2013). [RI70] S. Lombardy and J. Sakarovitch, Corrigendum to our paper: How expressions can code for automata, RAIRO-Theoretical Informatics and Applications, 44 (2010), pp. 339–361. [RI71] S. Lombardy and J. Sakarovitch, The validity of weighted automata, International Journal of Algebra and Computation, 23 (2013), pp. 863–913. [RI72] O. Ly and Z. Wu, On effective construction of the greatest solution of language inequality XA ⊆ BX, Theoretical Computer Science, 528 (2014), pp. 12–31. [RI73] R. Moot, Categorial grammars and minimalist grammars, Springer LNAI, 6700 (2011). [RI74] R. Moot, Wide-coverage semantics for spatio-temporal reasoning, Traitement Automatique des Langues, (2012), pp. 1–28. [RI75] N. Ouled Abdallah, H. Hadj Kacem, M. Mosbah, and A. Zemmari, Randomized broadcasting in wireless mobile sensor networks, Concurrency and Computation: Practice and Experience, 25 (2013), pp. 203–217. [RI76] P. Parys and I. Walukiewicz, Weak alternating timed automata, Logical Methods in Computer Science, 8 (2012), pp. 1–27. [RI77] L.-M. Real-Coelho and C. Retoré, Deverbal semantics and the montagovian generative lexicon, Journal of Logic, Language and Information, (2014), p. 21. [RI78] D. Renault, The vertex-transitive TLF-planar graphs, Discrete Mathematics, 309 (2009). BIBLIOGRAPHY 287 [RI79] D. Renault and J.-F. Marckert, Compact convex sets of the plane and probability theory, ESAIM: Probability and Statistics, (2014), p. 34. [RI80] C. Retoré, Note de lecture sur two-step approaches to natural language formalisms de Frank Morawietz, Traitement Automatique des Langues, 48 (2009), pp. 227–229. [RI81] C. Retoré, Variable types for meaning assembly: a logical syntax for generic noun phrases introduced by "most", Recherches linguistiques de Vincennes, 41 (2012), pp. 83–102. [RI82] C. Retoré and R. Moot, Note de lecture sur "discourse processing" de Manfred Stede, Traitement Automatique des Langues, 53 (2013), pp. 214–217. [RI83] C. Retoré and S. Salvati, A faithful representation of non-associative Lambek grammars in abstract categorial grammars, Journal of Logic Language and Information, 19 (2010), pp. 185–200. [RI84] S. Salvati, On the membership problem for non-linear abstract categorial grammars, Journal of Logic, Language and Information, 19 (2010), pp. 163–183. [RI85] S. Salvati, Mix is a 2-MCFL and the word problem in Z2 is solved by a third-order collapsible pushdown automaton, Journal of Computer and System Sciences, to appear (2014). [RI86] S. Salva and A. Rollet, A pragmatic approach for testing stateless and stateful web service robustness, Studia Informatica Universalis, 10 (2012), pp. 139–179. [RI87] T. Sebastian, D. Debarbieux, O. Gauwin, J. Niehren, and M. Zergaoui, Early nested word automata for XPath query answering on XML streams, Theoretical Computer Science, (2014). [RI88] P. Silva and P. Weil, Automorphic orbits in free groups: words versus subgroups, International Journal of Algebra and Computation, 20 (2010), pp. 561–590. [RI89] P. Silva and P. Weil, On finite-index extensions of subgroups of free groups, Journal of Group Theory, 13 (2010), pp. 365–381. [RI90] M. Tounsi, M. Mosbah, and D. Méry, Proving distributed algorithms by combining refinement and local computations, Electronic Communications of the EASST, 35 (2011). [RI91] Z. Zhu, C. M. Li, F. Manyi, and L. Simon, Optimizing with minimum satisfiability, Artificial Intelligence, 190 (2012), pp. 32–44. Peer-reviewed journals (national) [RN1] L. Clément, Zeugme sémantique, Revue de Sémantique et de Pragmatique, (2010), pp. 231–247. [RN2] C. Retoré and G. Zémor, Recension de "la déesse des petites victoires" yannick grannec (editions anne carrière, 2012), La gazette des mathématiciens, (2014), pp. 113–116. Contributed volumes (international) [OI1] B. Courcelle and J. Engelfriet, Graph structure and monadic second-order logic. A languagetheoretic approach., Cambridge University Press, 2012. [OI2] R. Moot and C. Retoré, The Logic of Categorial Grammars: A Deductive Account of Natural Language Syntax and Semantics, Springer, 2012. [OI3] G. Puppis, Automata for Branching and Layered Temporal Structures: an Investigation into Regularities of Infinite Transition Systems, Springer, 2010. Chapters in contributed volumes (international) 288 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CHI1] F. Barbier, P. Castéran, E. Cariou, and O. Le Goaer, Adaptive software based on correctby-construction metamodels, in Progressions and Innovations in Model-Driven Software Engineering, IGI Global, 2013, pp. 308–325. [CHI2] A. Ben Zakour, S. Maabout, M. Mosbah, and M. Sistiaga, Relaxing time granularity for mining frequent sequences, in Advances in Knowledge and Data Mining, Springer, 2013, pp. 53–76. [CHI3] A. Ben Zakour, S. Maabout, M. Mosbah, and M. Sistiaga, Relaxing time granularity for mining frequent sequences, in Advances in Knowledge Discovery and Management, Springer International Publishing, 2014, pp. 53–76. [CHI4] R. Bonato and C. Retoré, Learning Lambek grammars from proof frames, in Categories and types in logic, language and physics – Festschrift on the occasion of Jim Lambek’s 90th birthday, Springer, 2014, pp. 108–135. [CHI5] B. Courcelle, Program semantics and infinite regular terms, in From Semantics to Computer Science, Essays in Honour of Gilles Kahn, Cambridge University Press, 2009, pp. 160–163. [CHI6] V. Diekert and A. Muscholl, Trace theory, in Encyclopedia of Parallel Computing, Springer, 2011, pp. 2071–2079. [CHI7] R. Moot, Extraction of type-logical supertags from the spoken dutch corpus, in Supertagging: Using Complex Lexical Descriptions in Natural Language Processing, MIT Press, 2010. [CHI8] A. Muscholl, I. Walukiewicz, and M. Zeitoun, A look at the control of asynchronous automata, in Perspectives in Concurrency Theory, Universities Press India, 2009, pp. 356–371. [II9] S. Salvati, Recognizability in the simply typed lambda-calculus, in Logic, Language, Information and Computation - 16th International Workshop, WoLLIC 2009, 2009. [CHI10] H. Straubing and P. Weil, An introduction to finite automata and their connection to logic, in Modern applications of automata theory, World Scientific, 2012, pp. 3–43. Chapters in contributed volumes (national) [CHN1] B. Courcelle, Structuration des graphes et logique, in Leçons de Mathématiques d’Aujourd’hui, Volume 4, Cassini, 2010, pp. 167–194. [CHN2] C. Retoré, Logique mathématique et linguistique formelle, in Leçons de mathématiques d’aujourd’hui, G. Sénizergues, ed., Cassini, 2013, p. 24. Editors of contributed volumes (international) [DI1] S. Albers and P. Weil, Special issue: Theoretical Aspects of Computer Science, Theory of Computing Systems, vol 47(3), Springer, 2010. [DI2] G. Castagna and I. Walukiewicz, Selected Papers of the Conference "International Colloquium on Automata, Languages and Programming 2008" (ICALP). Special issue of Logical Methods in Computer Science., IfCoLog, 2009. [DI3] R. Echahed, H. Annegret, and M. Mosbah, Graph Computation Models 2012, EASST, 2013. [DI4] R. Echahed, A. Habel, and M. Mosbah, Graph Computation Models 2010, vol. 61 of Electronic Communication of the European Association of Software Science and Technology, EASST, 2011. [DI5] J. Leroux, A. Finkel, and I. Potapov, Reachability Problems - 6th International Workshop, RP 2012, Springer, 2012. [DI6] S. Pogodalla, M. Quatrini, and C. Retoré, Logic and Grammar. Essays Dedicated to Alain Lecomte on the Occasion of His 60th Birthday, vol. 6700, Springer, 2011. BIBLIOGRAPHY 289 [DI7] G. Puppis and T. Villa, Proceedings Fourth International Symposium on Games, Automata, Logics and Formal Verification, Electronic Proceedings in Theoretical Computer Science, 2013. [DI8] P. Weil and W. Thomas, Special issue: Theoretical Aspects of Computer Science, Theory of Computing Systems, vol 46(3), Springer, 2010. Editors of contributed volumes (national) [DN1] F. Lambert, C. Bassac, and L. Clément, Revue de Sémantique et de Pragmatique numéro 24, Presses Universitaires d’Orléans, 2010. Invited conference talks (international) [II1] M. Abrusci and C. Retoré, Quantification and interaction, in Rebuilding logic and rethinking language in interaction terms (CLMPS workshop), 2011. [II2] B. Courcelle, Monadic second-order logic for graphs : algorithmic and language theoretical applications, in LATA 2009, vol. 5457 of LNCS, Springer, 2009, pp. 19–22. [II3] B. Courcelle, On several proofs of the recognizability theorem, in Proceedings of CAI 2009 (Conference on Algebraic Informatics), vol. 5725 of LNCS, Springer, 2009, pp. 78–80. [II4] B. Courcelle, Special tree-width and the verification of monadic second-order graph properties, in IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science, FSTTCS 2010, vol. 8 of LIPIcs, Leibniz-Zentrum fuer Informatik, 2010. [II5] B. Courcelle, Automata for monadic second-order model checking, in Reachability problems, vol. 6945 of LNCS, Springer, 2011. [II6] V. Diekert and A. Muscholl, On distributed monitoring of asynchronous systems, in Logic, Language, Information and Computation - 19th International Workshop, WoLLIC 2012, 2012. [II7] T. Gawlitza, J. Leroux, J. Reineke, H. Seidl, G. Sutre, and R. Wilhelm, Polynomial precise interval analysis revisited, in Efficient Algorithms, vol. 5760 of LNCS, Springer, 2009, pp. 422–437. [II8] D. Janin, Towards a higher-dimensional string theory for the modeling of computerized systems, in 40th International Conference on Current Trends in Theory and Practice of Computer Science (SOFSEM), vol. 8327 of LNCS, Springer, 2014, pp. 7–20. [II9] J. Leroux, Acceleration for Petri nets, in Proceedings of the 11th International Symposium on Automated Technology for Verification and Analysis (ATVA’13), LNCS, Springer, 2013, pp. 1–4. [II10] J. Leroux, Acceleration for Presburger Petri nets, in VPT@CAV, vol. 16 of EPiC Series, A. Voronkov, 2013, pp. 10–12. [II11] M. Moortgat and R. Moot, Proofs nets and the categorial flow of information, in Logic and Interactive Rationality, Institute of Logic Language and Computation, 2012. [II12] A. Muscholl, Analysis of communicating automata, in Language and Automata Theory and Applications, 4th International Conference, LATA 2010, LNCS, Springer, 2010, pp. 50–57. [II13] A. Muscholl, Taming distributed asynchronous systems, in Concurrency Theory, 21th International Conference, CONCUR 2010, LNCS, Springer, 2010, pp. 40–47. [II14] C. Retoré, Talking and understanding: cognitive processes and computational models of the language faculty, in Cognitique / cognitics, vol. 10, 2010. [II15] C. Retoré, Typed hilbert epsilon operators and the semantics of determiner phrases (invited lecture), in Formal Grammar 2014, vol. 8612 of LNCS, Springer, 2014, pp. 15–33. 290 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [II16] I. Walukiewicz, Synthesis: Words and traces, in Proceedings of the International Symposium on Automated Technology for Verification and Analysis (ATVA), vol. 6252, 2010, pp. 18–21. [II17] P. Weil, Distributions of finitely generated subgroups of free groups, in International Conference on Geometric and Combinatorial Methods in Group Theory and Semigroup Theory, 2009. [II18] P. Weil, On two distributions of finitely generated subgroups of free groups, in Workshop on Geometric and Asymptotic Group Theory and Applications, 2009. [II19] P. Weil, From algebra to logic: there and back again – the story of a hierarchy, in Developments in Language Theory, DLT 2014, vol. 8633 of LNCS, Springer, 2014. Conferences with published proceedings (international) [CI1] S. Abbas, M. Mosbah, and A. Zemmari, A generic distributed algorithm for computing by random mobile agents, in Proceedings PRIMA, vol. 5044 of Lecture Notes in Artificial Intelligence, Springer, 2009, pp. 392–397. [CI2] W. Abdou, C. Bloch, D. Charlet, D. Dhoutaut, and F. Spies, Designing smart adaptive flooding in MANET using evolutionary algorithm, in MobilWare 2011, 4th Int. ICST Conf. on MOBILe Wireless MiddleWARE, Operating Systems, and Applications, vol. 93, 2011, pp. 71–84. [CI3] W. Abdou, C. Bloch, D. Charlet, D. Dhoutaut, and F. Spies, Designing smart adaptive flooding in MANET using evolutionary algorithm, in MobilWare 2011, 4th Int. ICST Conf. on MOBILe Wireless MiddleWARE, Operating Systems, and Applications, 2011, pp. 71 – 84. [CI4] W. Abdou, C. Bloch, D. Charlet, and F. Spies, Multi-pareto-ranking evolutionary algorithm, in EvoCOP 2012, 12th European Conf. on Evolutionary Computation in Combinatorial Optimization, 2012, pp. 194–205. [CI5] W. Abdou, C. Bloch, D. Charlet, and F. Spies, Multi-pareto-ranking evolutionary algorithm, in EvoCOP 2012, 12th European Conf. on Evolutionary Computation in Combinatorial Optimization, vol. 7245, 2012, pp. 194–205. [CI6] W. Abdou, C. Bloch, D. Charlet, and F. Spies, Nice-mrp: a near-optimal radio-interference aware multi-path routing protocol for manets, in ICNCS 2013, 10th IEEE Int. Conf. on Networking, Sensing and Control, 2013, pp. 753–758. [CI7] W. Abdou, B. Darties, and N. Mbarek, A novel multi-hop broadcasting method for VANETs based on autonomic computing paradigm, in International Conference on Communications and Networking, IEEE, 2014. [CI8] P. A. Abdulla, Y.-F. Chen, L. Clemente, L. Holík, C.-D. Hong, R. Mayr, and T. Vojnar, Simulation subsumption in ramsey-based büchi automata universality and inclusion testing, in Computer Aided Verification (CAV), 2010. [CI9] P. A. Abdulla, Y.-F. Chen, L. Clemente, L. Holík, C.-D. Hong, R. Mayr, and T. Vojnar, Advanced Ramsey-based Büchi automata inclusion testing, in CONCUR, 2011. [CI10] S. Abiteboul, P. Bourhis, A. Muscholl, and Z. Wu, Recursive queries on trees and data trees, in Proceedings of the 16th International Conference on Database Theory (ICDT), 2013. [CI11] M. Abrusci and C. Retoré, Quantification in ordinary language, in 14th Congress of logic, methodology and philosophy of science, 2011. [CI12] C. Aguerre, T. Morsellino, and M. Mosbah, Debugging the execution of distributed algorithms over anonymous networks, in Proceedings of the International Conference on Information Visualisation, 2012, pp. 464–470. F.3. FORMAL METHODS 291 [CI13] C. Aguerre, T. Morsellino, and M. Mosbah, Fully-distributed debugging and visualization of distributed systems in anonymous networks, in Proceedings of the International Conference on Information Visualization Theory and Applications, INSTICC, 2012, pp. 764–767. [CI14] P.-Y. Angrand, S. Lombardy, and J. Sakarovitch, On the number of broken derived terms of a rational expression, in 11th Workshop on Descriptional Complexity of Formal Systems (DCFS’09), University of Magdeburg, 2009, pp. 79–90. [CI15] J.-Y. Antoine, J. Villaneau, and A. Lefeuvre, Weighted Krippendorff’s alpha is a more reliable metrics for multi-coders ordinal annotations: experimental studies on emotion, opinion and coreference annotation., in Proceedings of the 14th Conference of the European Chapter of the Association for Computational Linguistics (EACL 2014), 2014. [CI16] G. Audemard, G. Katsirelos, and L. Simon, A restriction of extended resolution for clause learning SAT solvers, in 24th Conference on Artificial Intelligence (AAAI’10), 2010, pp. 10–15. [CI17] G. Audemard, J.-M. Lagniez, and L. Simon, Du Glucose en goutte à goutte pour les coeurs insatisfiables, in 9ièmes Journées Francophones de Programmation par Contraintes (JFPC’13), 2013, pp. 59–66. [CI18] G. Audemard, J.-M. Lagniez, and L. Simon, Improving Glucose for incremental SAT solving with assumptions: Application to MUS extraction, in International Conference on Theory and Applications of Satisfiability Testing, 2013. [CI19] G. Audemard, J.-M. Lagniez, and L. Simon, Just-in-time compilation of knowledge bases, in International Joint Conference on Artificial Intelligence (IJCAI), 2013. [CI20] G. Audemard, J.-M. Lagniez, and L. Simon, Just-in-time compilation of knowledge bases, in 23th International Joint Conference on Artificial Intelligence (IJCAI’13), Beijing, 2013, pp. 447–453. [CI21] G. Audemard, M. S. Modeliar, and L. Simon, Pourquoi les solveurs SAT modernes se piquentils contre des cactus ?, in Actes des Cinquièmes Journées Francophones de Programmation par Contraintes, Orléans, juin 2009, 2009, pp. 245–255. [CI22] G. Audemard and L. Simon, Lazy clause exchange policy for parallel sat solvers, in 17th International Conference on Theory and Applications of Satisfiability Testing, 2014. [CI23] M. Bauderon, C. Bobineau, S. Grumbach, A. Henry, X. Qi, W. Qu, K. Suo, F. Wang, and Z. Wu, Netquest: An abstract model for pervasive applications, in Seventh IEEE International Conference on Pervasive Computing (Pervasive 2009), LNCS, 2009, pp. 467–481. [CI24] G. Bagan, A. Durand, E. Filiot, and O. Gauwin, Efficient enumeration for conjunctive queries over X-underbar structures, in Proceedings of the 19th EACSL Annual Conference on Computer Science Logic, vol. 6247 of LNCS, Springer, 2010, pp. 80–94. [CI25] S. Bardin, P. Herrman, J. Leroux, O. Ly, R. Tabary, and A. Vincent, The BINCOA framework for binary code analysis, in Computer-aided verification 2011, vol. 6806 of LNCS, Springer, 2011, pp. 165–170. [CI26] F. Bassino, A. Martino, C. Nicaud, E. Ventura, and P. Weil, On two distributions of subgroups of free groups, in Proceedings of the Workshop on Analytic Algorithmics and Combinatorics (ANALCO) 2010, SIAM, 2010, pp. 82–89. [CI27] F. Bassino, C. Nicaud, and P. Weil, Generic properties of random subgroups of a free group for general distributions, in Proceedings of Analysis of Algorithms (AofA 2012), vol. AQ of Discrete Mathematics and Theoretical Computer Science, 2012, pp. 155–166. [CI28] W. Ben Jaballah, M. Conti, M. Mosbah, and C. Palazzi, Secure verification of location claims on a vehicular safety application, in Computer Communications and Networks (ICCCN) 2013, IEEE, 2013, pp. 1–7. 292 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI29] W. Ben Jaballah, M. Mosbah, H. Youssef, and A. Zemmari, Lightweight source authentication mechanisms for group communications in wireless sensor networks, in IEEE 27th International Conference on Advanced Information Networking and Applications (AINA), IEEE, 2013, pp. 598–605. [CI30] A. Benzakour, S. Maabout, M. Mosbah, and M. Sistiaga, Time constraints extension on frequent sequential patterns, in Proceedings of KDIR, SciTePress, 2010, pp. 281–287. [CI31] A. Benzakour, S. Maabout, M. Mosbah, and M. Sistiaga, Uncertainty interval temporal sequences extraction, in Proceedings of the 6th Int. Conf. on Information Systems, Technology and Management (ICISTM), no. 285 in Com. Comp. Info. Science (CCIS), Springer, 2012, pp. 259–270. [CI32] M. Ben Mbarka, F. Krief, and O. Ly, Entrusting remote software executed in an untrusted computation helper, in International Conference on Network and Service Security, 2009, 2009, pp. 1–5. [CI33] M. Ben Mbarka, F. Krief, and O. Ly, Modeling long-term signature validation for resolution of dispute, in Theory of Security and Applications Lecture Notes in Computer Science Volume 6993, 2012, vol. 6993, 2012, pp. 78–97. [CI34] M. Benedikt, C. Ley, and G. Puppis, Automata vs. logics on data words, in Proceedings of CSL 2010, vol. 6247 of LNCS, Springer, 2010, pp. 110–124. [CI35] M. Benedikt, C. Ley, and G. Puppis, What you must remember when processing data words, in Proceedings of AMW 2010, vol. 619 of CEUR Workshop Proceedings, CEUR-WS.org, 2010. [CI36] M. Benedikt, G. Puppis, and C. Riveros, Regular repair of specifications, in Proceedings of LICS 2011, IEEE Computer Society, 2011, pp. 335–344. [CI37] M. Benedikt, G. Puppis, and H. Vu, Positive higher-order queries, in Proceedings of PODS 2010, ACM, 2010, pp. 27–38. [CI38] F. Berthaut, D. Janin, and M. Desainte-Catherine, libTuile : un moteur d’execution multiechelle de processus musicaux hierarchises, in Actes des Journées d’Informatique Musicale (JIM), 2013, pp. 45–50. [CI39] F. Berthaut, D. Janin, and B. Martin, Advanced synchronization of audio or symbolic musical patterns: An algebraic approach, in Sixth IEEE International Conference on Semantic Computing (ICSC), 2012, pp. 202–209. [CI40] N. Bertrand, B. Genest, and H. 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Oudeyer, Bio-inspired vertebral column, compliance and semipassive dynamics in a lightweight robot, in IEEE IROS, 2011. [CI177] O. Ly, M. Lapeyre, and P.-Y. Oudeyer, Bio-inspired vertebral column, compliance and semipassive dynamics in a lightweight robot, in International Conference on Robots and Systems, 2011. F.3. FORMAL METHODS 301 [CI178] O. Ly and P.-Y. Oudeyer, Acroban the humanoid: Playful and compliant physical child-robot interaction, in ACM SIGGRAPH’2010 Emerging Technologies, 2010. [CI179] A. Manuel, A. Muscholl, and G. Puppis, Walking on data words, in 8th International Computer Science Symposium in Russia (CSR), 2013, pp. 64–75. [CI180] B. Mery, R. Moot, and C. Retoré, Plurals: individuals and sets in a richly typed semantics, in LENSL’10 - 10th Workshop on Logic and Engineering of Natural Semantics of Language, Japanese Symposium for Artifitial Intelligence, International Society for AI - 2013, Keio University, 2013, pp. 143–156. [CI181] B. Mery and C. Retoré, Advances in the logical representation of lexical semantics, in NLCS’13 - Natural Language and Computer Science - 2013, 2013. [CI182] B. Mery and C. Retoré, Semantic types, lexical sorts and classifiers, in NLPCS ’10- 10th International Workshop on Natural Language Processing and Computer Science - 2013, 2013. [CI183] R. Moot, Semi-automated extraction of a wide-coverage type-logical grammar for french, in TALN 2010, 2010. [CI184] R. Moot, Wide-coverage french syntax and semantics using Grail, in TALN 2010, 2010. [CI185] R. Moot, Extended Lambek calculi and first-order linear logic, in Lecture Notes in Artificial Intelligence, vol. 8222 of LNCS, Springer, 2014, pp. 297–330. [CI186] R. Moot, L. Prévot, and C. Retoré, A discursive analysis of itineraries in an historical and regional corpus of travels, in Constraints in discourse, 2011. [CI187] R. Moot, L. Prévot, and C. 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Puppis, P. Sala, and G. Sciavicco, Decidability of the interval temporal logic ABB over the natural numbers, in Proceedings of STACS 2010, Schloss Dagstuhl - LeibnizZentrum fuer Informatik, 2010, pp. 597–608. [CI193] A. Montanari, G. Puppis, P. Sala, and G. Sciavicco, Decidability of the interval temporal logic ABB over the natural numbers, in 27th International Symposium on Theoretical Aspects of Computer Science - STACS 2010, 2010, pp. 597–608. [CI194] A. Muscholl and S. Schewe, Unlimited decidability of distributed synthesis with limited missing knowledge, in Proceedings of MFCS’13 (Mathematical Foundations of Computer Science), LNCS, Springer, 2013, pp. 691–703. [CI195] K. Musumbu, A new operational semantics for prolog, in Proceedings of the International Conference on Artificial Intelligence and Pattern Recognition, 2009, pp. 251–261. 302 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI196] K. 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Retoré, Sémantique des déterminants dans un cadre richement typé, in Actes de la conférence TALN/RECITAL 2013, 2013. [CI226] C. Retoré, Type-theoretical natural language semantics: on the system F for meaning assembly, in TYPES 2013, 2013, pp. 64–65. [CI227] C. Retoré, The Montagovian generative lexicon λtyn: a type theoretical framework for natural language semantics, in 19th International Conference on Types for Proofs and Programs (TYPES 2013), vol. 27 of Leibniz International Proceedings in Informatics (LIPIcs), Schloss Dagstuhl - LeibnizZentrum für Informatik, Dagstuhl Publishing, Germany, 2014, pp. 301–330. [CI228] A. Rollet and S. Salva, Testing robustness of communicating systems using ioco-based approach, in Proceedings of 1st IEEE Workshop on Performance evaluation of communications in distributed systems and Web based service architectures, in conjunction with IEEE ISCC 2009, 2009, pp. 67–72. [CI229] S. Salvati, G. Manzonetto, M. Gehrke, and H. 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Rollet, Test purpose generation for timed protocol testing, in proceedings of 2nd International Conference on Communication Theory, Reliability, and Quality of Service (CTRQ 2009), 2009, p. 7p. [CI235] L. Simon and G. Audemard, Predicting learnt clauses quality in modern SAT solver, in Twentyfirst International Joint Conference on Artificial Intelligence (IJCAI’09), 2009. [CI236] L. Simon, G. Audemard, and K. George, A restriction of extended resolution for clause learning SAT solvers, in AAAI, 2010. [CI237] L. Simon, C. M. Li, F. Manya, and Z. Zhu, Minimum satisfiability and its applications, in International Joint Conference on Artificial Intelligence, 2011. [CI238] H. Soueidan, G. Sutre, and M. Nikolski, Qualitative transition systems for the abstraction and comparison of transient behavior in parametrized dynamic models, in Proc. 7th Int. Conf. on Computational Methods in Systems Biology (CMSB’09), 2009, vol. 5688 of Lecture notes in BioInformatics, Springer, 2009, pp. 313–327. 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Spies, Conception d’un protocole de diffusion auto-adaptatif pour les MANETs par approche évolutionniste, in ROADEF’11, 12ème Congrès de la Société Française de Recherche Opérationnelle et d’Aide à la Décision, vol. II, 2011, pp. 483–484. [CN2] W. Abdou, N. Mbarek, and B. Darties, Gestion autonome des communications dans les réseaux adhoc de véhicules : cas de la diffusion, in Journées Nationales des Communications dans les Transports, 2013. [CN3] G. Audemard, G. Katsirelos, and L. Simon, Une restriction de la résolution étendue pour les démonstrateurs SAT modernes, in JFPC 2010 - Sixièmes Journées Francophones de Programmation par Contraintes, 2010, pp. 43–50. [CN4] A. Benzakour, S. Maabout, M. Mosbah, and M. Sistiaga, Extraction de séquences fréquentes avec intervalles d’incertitude, in Actes de la 12e Conférence Internationale Francophone sur l’Extraction et la Gestion de Connaissance (EGC), RNTI (Revue des nouvelles technologies de l’information), Hermann, 2012, p. 12 pages. 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Gauwin, Flux XML, Requêtes XPath et Automates, PhD thesis, Université Lille 1, LIFL, INRIA, 2009. F.3. FORMAL METHODS 307 [AI25] B. Genest, H. Gimbert, A. Muscholl, and I. Walukiewicz, Asynchronous games over tree architectures. 2012. [AI26] H. Gimbert, Randomized strategies are useless in Markov decision processes. 2009. [AI27] H. Gimbert and F. Horn, Solving simple stochastic games with few random vertices. 2009. [AI28] H. Gimbert and E. Kelmendi, Two-player perfect-information shift-invariant submixing stochastic games are half-positional. 2014. [AI29] H. Gimbert and Y. Oualhadj, Deciding the value 1 problem for #-acyclic partially observable Markov decision processes, tech. rep., 2012. [AI30] H. Gimbert, Y. Oualhadj, and S. Paul, Computing optimal strategies for Markov decision processes with parity and positive-average conditions. 2011. [AI31] H. Gimbert, J. Renault, S. Sorin, X. Venel, and W. Zielonka, On the values of repeated games with signals. 2014. [AI32] H. Gimbert and W. Zielonka, Pure and stationary optimal strategies in perfect-information stochastic games. 2009. [AI33] A. Griffault, G. Point, F. Kuntz, and A. Vincent, Symbolic computation of minimal cuts for altarica models, tech. rep., 2011. [AI34] A. Heussner, Model extraction for sockets-based distributed programs. 2009. [AI35] A. Heussner, J. Leroux, A. Muscholl, and G. Sutre, Reachability analysis of communicating pushdown systems. 2010. [AI36] A. Heussner, G. Sutre, and T. Le Gall, Extrapolation-based path invariants for abstraction refinement of fifo systems. Rapport de Recherche RR-1459-09 LaBRI, 2009. [AI37] D. Janin, On quasi-inverse monoids (and premorphisms), tech. rep., 2012. [AI38] D. Janin, Walking automata in the free inverse monoid, tech. rep., 2012. [AI39] R. Moot, Hybrid type-logical grammars, first-order linear logic and the descriptive inadequacy of lambda grammars, tech. rep., 2014. [AI40] M. Moortgat and R. Moot, Proof nets for the Lambek-Grishin calculus. 2011. [AI41] A. Muscholl and I. Walukiewicz, Distributed synthesis for acyclic architectures. 2014. [AI42] O. L. Nguena Timo, A decidable timed mu-calculus for event-recording automata. 2009. [AI43] O. L. Nguena Timo, The logic WTmu. 2009. [AI44] O. L. Nguena Timo, Synthèse pour une Logique Temps-Réel Faible, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2009. [AI45] O. L. Nguena Timo, H. Marchand, and A. Rollet, Automatic test generation for data-flow reactive systems modeled by variable driven timed automata. 2010. [AI46] O. L. Nguena Timo and P.-A. Reynier, On characteristic formulae for event-recording automata. 2009. [AI47] Y. Oualhadj, P.-A. Reynier, and O. Sankur, Probabilistic robust timed games, tech. rep., 2014. [AI48] T. Place, Decidable characterizations for tree logics, PhD thesis, ENS Cachan, 2010. [AI49] C. Retoré, On the system F as a glue language for natural-language compositional-semantics. 2011. 308 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [AI50] C. Retoré, A type theoretical framework for natural language semantics: the Montagovian generative lexicon, tech. rep., 2013. [AI51] S. Salvati, Minimalist grammars in the light of logic, tech. rep., 2011. [AI52] S. Salvati and I. Walukiewicz, Krivine machines and higher-order schemes, tech. rep., 2011. [AI53] S. Salvati and I. Walukiewicz, Recursive schemes, Krivine machines, and collapsible pushdown automata, tech. rep., 2012. [AI54] B. Srivathsan and I. Walukiewicz, An alternate proof of statman’s finite completeness theorem. 2010. [AI55] L. van Rooijen and M. Zeitoun, The separation problem for regular languages by piecewise testable languages. 2013. Other publications (national) [AN1] R. Bernard, Analyses de sûreté de fonctionnement multi-systèmes, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2009. [AN2] P. Bourreau, Jeux de typage et analyse de lambda-grammaires non-contextuelles, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2012. [AN3] L. Braud, The structure of orders in the pushdown hierarchy, PhD thesis, Université Paris-Est, 2010. [AN4] E. Garnaud, Dépendances fonctionnelles : extraction et exploitation, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AN5] H. Gimbert and Y. Oualhadj, Automates probabilistes: problèmes décidables et indécidables. Rapport de Recherche RR-1464-09 LaBRI, 2009. [AN6] F. Kuntz, Une approche basée modèle pour l’optimisation du monitoring de systèmes avioniques relativement à leurs performances de diagnostic, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AN7] O. Ly and L. Goubin, Sûreté de fonctionnement et sécurité des algorithmes cryptographiques, Multisystem & Internet Security Cookbook (MISC), 42 (2009), p. 6. [AN8] B. Mery, Modélisation de la Sémantique Lexicale dans le cadre de la théorie des types, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2011. [AN9] Y. Oualhadj, Le problème de la valeur dans les jeux stochastiques, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2012. Other software – AltaRica, http://altarica.labri.fr/wp/ – Autograph, http://dept-info.labri.u-bordeaux.fr/ idurand/autograph/ – Autowrite, http://dept-info.labri.fr/ idurand/autowrite/ – Glucose, http://www.labri.fr/perso/lsimon/glucose/ – GRAIL, http://www.labri.fr/perso/moot/grail.html – Insight, http://insight.labri.fr/trac – Rhoban, http://rhoban.labri.fr/pub/ – Vaucanson, http://www.vaucanson-project.org/ – TaPAS/Faster, http://tapas.labri.fr/trac/wiki/FASTer – TChecker, http://www.labri.fr/perso/herbrete/tchecker/ – Visidia, http://visidia.labri.fr//html/home.html F.3. FORMAL METHODS 309 – XLFG, http://www.xlfg.org/ Completed PhDs – Philippe Andouard: Outils d’aide à la recherche de vulnérabilité dans l’implantation d’applications embarquées sur carte à puce (2006 - 2009, CIFRE SERMA, O. Ly, M. Mosbah). – Asma Ben Zakour: Extraction des utilisations typiques à partir de données hétérogènes historisées en vue d’optimiser la maintenance d’une flotte de véhicules (2009 - 2012. CIFRE 2Moro, S. Maabout, M. Mosbah, M. Sistiaga). – Romain Bernard: Analyses de sûreté de fonctionnement multi-systèmes (2006–2009, CIFRE AIRBUS, P. Bieber, A. Griffault, M. Zeitoun). – Pierre Bourreau: Jeux de typage et analyse de lambda-grammaires non-contextuelles (2007-2012, CordiS, Ch. Retoré S. Salvati) – Fares Chucri : Exploiting Model Structure in CEGAR Verification Method (2007 - 2012, A. Griffault, G. Sutre, I. Walukiewicz). – Vincent Filou: Une étude formelle de la théorie des calculs locaux à l’aide de l’assistant de preuve Coq (2009-2012, M. Mosbah et P. Castéran). – Eve Garnaud: Dépendances fonctionnelles : extraction et exploitation (2010 - 2013, S. Maabout, M. Mosbah). – Hédi Hamdi: Vérification de politiques de sécurité dans un système distribué (2004 - 2009, Cotutelle Tunis, A. Bouhoula, M. Mosbah). – Alexander Heussner : Vers la Vérification de Propriétés de Sureté pour des Systèmes Infinis Communicants : Décidabilité & Raffinement des Abstractions (2008-2011, A. Muscholl, G. Sutre et J. Leroux). – Fabien Kuntz : Une approche basée modèle pour l’optimisation du monitoring de systèmes avioniques relativement à leurs performances de diagnostic (2009-2013, CIFRE, A. Griffault, S. Gaudan, C. Sannino, A. Muscholl). – Anais Lefeuvre: Sémantique des temps du français: une formalisation compositionnelle (2009-2014, C. Rétoré, M. Gaio) – Bruno Mery : Une modélisation de la sémantique lexicale dans le cadre de la théorie des types (2006-2011 Ch. Bassac, Ch. Retoré) – Omer Landry Nguena Timo: Controller synthesis of weak real-time systems (2003-2009, A. Arnold, I. Walukiewicz) – Youssouf Oualhadj : Algorithmique des jeux à information imparfaite (2009-2012, H.Gimbert, A. Muscholl). – Noemie-Fleur Sandillon-Rezer: Apprentissage de grammaires catégorielles : Transducteurs d’arbres et clustering pour induction de grammaires catégorielles (2010-2013, C. Rétoré, R. Moot) – B. Srivathsan: Abstractions for Timed Automata (2009-2012, F. Herbreteau, I. Walukiewicz). – Céline Thuillet: Evaluation de composants cryptographiques dans la PMR (2008 - 2011, CIFRE EADS, O. Ly, M. Mosbah). – Mohamed Tounsi: Preuves des algorithmes distribués par raffinement (2009-2012, M. Mosbah). – The Quang Tran: Unfolding Concurrent Well-Structured Transition Systems (2004-2009, F. Herbreteau, G. Sutre, I. Walukiewicz). including cotutelle PhDs (international) – Wafa Ben Jaballah: Etude d’algorithmes distribués dans des réseaux mobiles (2011-2014, cotutelle, M. Mosbah. H. Youssef). – Alessandro Facchini: A study on the expressive power of some fragments of the modal mu-calculus (20072010, cotutelle Université de Lausanne, J. Duparc, I. Walukiewicz). – Monia Loulou: Approche Formelle pour la Spécification la Vérification et le Déploiement des Politiques de Sécurité Dynamiques dans les Systèmes à base d’Agents Mobiles (2006-2010, cotutelle U. Sfax, M. Jmaiel, M. Mosbah). Completed habilitations – Jérôme Leroux, Presburger Counter Machines, 2012 – Olivier Ly, Un parcours de recherche des méthodes formelles aux robots humanoïdes, 2012 310 F.3.2 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Visibility and attractivity Editorial and organizational activities Steering committee (international) – FICS (Fixpoints in Computer Science): I. Walukiewicz (2009- ) – FOSSACS (Foundations of Software Science and Computation Structures): I. Walukiewicz (2011- ) – GAGTA (Geometrical and Asymptotic Group Theory and Applications), P. Weil (2011-2015) – GAMES (ESF Research Networking Programme): I. Walukiewicz (2008-2013) – Highlights of Logic, Games and Automata: H. Gimbert (2013 - ) – ICGT (International Conference on Graph Transformations): M. Mosbah (2009 - 2014) – Logical Aspects of Computational Linguistics: Ch. Retoré (2011- ) – STACS (Symposium on Theor. Aspects of Computer Science): A. Muscholl (2008-2014), co-president 2012-2014 – STACS (Symposium on Theor. Aspects of Computer Science): P. Weil (2005-2011), co-president 2008-2011 Steering committee (national) – EPIT (Ecole de Printemps d’Informatique Théorique): A. Muscholl (2009-2015) – JFLA (Journées Francophones des Langages Applicatifs): P. Castéran (2008-2014) Program committee (international) – ACL’10 (Association for Computational Linguistics): C. Retoré – AFL’11 (Automata and Formal Languages): P. Weil – AISS’14 (Algorithmics of Infinite State Systems), satellite workshop of CSL/LICS 2014: S. Salvati – AMIL’10 Advances in Modal Logic: I. Walukiewicz – ATVA’11 (12th International Symposium on Automated verification) : J.Leroux – CAI 2013 (Algebraic Informatics) : B. Courcelle – CIAA’13 (18th International Conference on Implementation and Application of Automata): S. Lombardy – CIAA’09 (14th International Conference on Implementation and Application of Automata): A. Muscholl – CSLP’12 (International Workshop Constraint Solving and Language Processing): C. Retoré – CSLP’12 (International Workshop on Contraint Solving and Language Processing): S. Salvati – CSLP’14 (8th Constraint Solving and Language Processing): C. Retoré – CSLP’14 (8th International Workshop on Contraint Solving and Language Processing): S. Salvati – CSL/LICS’14 (Computer Science Logic/Symposium on Logic in Computer Science: I. Walukiewicz – CSR’12 (International Computer Science Symposium in Russia): A. Muscholl – CSR’11 (International Computer Science Symposium in Russia): I. Walukiewicz – DLT’11 (Developments on Language Theory): A. Muscholl – DLT’09 (Developments on Language Theory): G. Sénizergues – FARM’14 (Workshop on Functional Art, Music, Modeling and Design): D. Janin – FCT’09 (International Symposium on Fundamentals of Computation Theory): I. Walukiewicz – FG’11 (Formal Grammar): C. Retoré – FG’12 (Formal Grammar): C. Retoré – FG’13 (Formal Grammar): C. Retoré – FG’14 (Formal Grammar): C. Retoré – FoSSaCS’11 (International Conference on Foundations of Software Science and Computation Structures): I. Walukiewicz – FSTTCS’12 (IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science): A. Muscholl F.3. FORMAL METHODS 311 – FSTTCS’09 (IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science): A. Muscholl – GandALF’12 (3rd International Symposium on Games, Automata, Logics and Formal Verification): G. Puppis – GandALF’12 (3rd International Symposium on Games, Automata, Logics and Formal Verification): A. Muscholl – International Conference on Geometric, Combinatorial and Dynamic Aspects of Semigroup and Group Theory: P. Weil – Highlights’14 (Highlights on Logic, Games and Automata): A. Muscholl – Highlights’13 (Highlights on Logic, Games and Automata): A. Muscholl – ICALP’12 (Int. Colloquium on Languages, Automata and Programming): I. Walukiewicz – ICALP’11 (Int. Colloquium on Languages, Automata and Programming): A. Muscholl – ICALP’09 (Int. Colloquium on Languages, Automata and Programming): A. Muscholl – ICDT’12 (International Conference on Database Theory): A. Muscholl – ICTSS’11 (23rd IFIP Int. Conference on Testing Software and Systems): A. Rollet – LACL’14 (8th International Conference on Logical Aspects of Computational Linguistics): C. Retoré – LACL’14 (8th International Conference on Logical Aspects of Computational Linguistics): S. Salvati – LACL’12 (7th International Conference on Logical Aspects of Computational Linguistics): S. Salvati – LACL’12 (7th International Conference Logical Aspects of Computational Linguistics): C. Retoré – LACL’11 (6th International Conference Logical Aspects of Computational Linguistics): C. Retoré – LATA’11 (6th International Conference on Language and Automata Theory and Applications) : P. Weil – LATA’13 (7th International Conference on Language and Automata Theory and Applications) : S. Lombardy – LICS’13 (IEEE Symposium on Logic in Computer Science): A. Muscholl – LICS’11 (IEEE Symposium on Logic in Computer Science): I. Walukiewicz – LICS’10 (IEEE Symposium on Logic in Computer Science): A. Muscholl – MFCS’09 (Mathematical Foundations of Computer Science): A. Muscholl – MOL’13 (Mathematics of Language): S. Salvati – MOL’12 (Mathematics of Language): S. Salvati – PODS’14 (ACM SIGMOD-SIGACT-SIGART Symposium on Principles of Database Systems): G. Puppis – RP’11: (5th international workshop on reachability problems): J.Leroux – RP’12: (6th international workshop on reachability problems) : J.Leroux – RP’13: (7th international workshop on reachability problems) : J.Leroux – RTA-TLCA’14 (Joint 25th International Conference on Rewriting Techniques and Applications and 12th International Conference on Typed Lambda Calculi and Applications): S. Salvati – SOFSEM’13 (International Conference on Current Trends in Theory and Practice of Computer Science): I. Walukiewicz – SOFSEM’09 ((International Conference on Current Trends in Theory and Practice of Computer Science): I. Walukiewicz – STACS’13 (Symposium on Theor. Aspects of Computer Science): M. Zeitoun – STACS’12 (Symposium on Theor. Aspects of Computer Science): I. Walukiewicz – TACAS’10 (International Conference on Tools and Algorithms for the Construction and Analysis of Systems): A. Muscholl – TAG’12 (11th International Workshop on Tree Adjoing Grammars and Related Formalisms): S. Salvati – TCS’14, IFIP Theoretical Computer Science: G. Sénizergues – TCS’12, IFIP Theoretical Computer Science: I. Walukiewicz – TIME’14 (21st International Symposium on Temporal Representation and Reasoning): G. Puppis – TTNLS’14 (Type theory and natural language semantics): C. Retoré 312 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – WoLLIC’13 (20th Workshop on Logic, Language, Information and Computation): G. Puppis – WoLLIC’12 (19th Workshop on Logic, Language, Information and Computation): S. Salvati Program committee – TALN’09 Traitement – TALN’11 Traitement – TALN’12 Traitement – TALN’13 Traitement – TALN’14 Traitement (national) Automatique Automatique Automatique Automatique Automatique du du du du du Langage Langage Langage Langage Langage Naturel: Naturel: Naturel: Naturel: Naturel: C. C. C. C. C. Retoré Retoré Retoré Retoré Retoré Presidence of program committee (international) – ESSLII’09, 21st European Summer School in Logic, Language and Information: C. Rétoré – GCM’14, Fifth International Workshop on Graph Computation Models: M. Mosbah – FoSSaCS’14, 17th International Conference on Foundations of Software Science and Computation Structures: A. Muscholl – GandALF’13, 4th International Symposium on Games, Automata, Logics and Formal Verification: G. Puppis, T. Villa – SOFSEM’10, 36th International Conference on Current Trends in Theory and Practice of Computer Science: A. Muscholl, D. Peleg Organizing committee (conferences, seminaries, schools...) (international) – EPIT’11, GAMES-Spring school, Carcans-Maubuisson, May 23-27, 2011 (H. Gimbert) – MBSAW’12, Model-Based Safety Assessment Workshop, Bordeaux (G. Point) – Workshop Automata, Concurrency and Timed Systems (ACTS), Chennai, 2009 (P. Weil) – Workshop en l’honneur de Bruno Courcelle, June 18-20, 2012, Bordeaux (P. Castéran, M. Mosbah, G. Sénizergues) Presidence of organizing committee (international) – ACG@10 ten years of Abstract Categorial Grammars, Bordeaux, 2011 (S. Salvati) – Workshop on Automata, Logic, Formal Languages and Algebra (ALFA), satellite workshop of ICALP’13, Riga (P. Weil) – Workshop en l’honneur de Bruno Courcelle, June 18-20, 2012, Bordeaux (A. Muscholl) – EPIT’11, GAMES-Spring school, Carcans-Maubuisson, May 23-27, 2011 (I. Walukiewicz) – Final open conference of ANR project FREC, CIRM Marseille, 2014 (G. Sénizergues) – Fifth International Workshop on Graph Computation Models (GCM) 2014 (M. Mosbah) – LCS’10, workshop "Logic, categories, semantics", Bordeaux (C. Retoré) – MBSAW’12, Model-Based Safety Assessment Workshop, Bordeaux (A. Griffault) – OPODIS (International Conference on Principles of Distributed Systems) 2010, Tunisia (M. Mosbah) – RP’12, 6th International workshop on Reachability Problems, September 17-19, 2012, Bordeaux (J. Leroux) – Shonan Summer School on the Coq Proof Assistant, Japan, 2014 (P. Castéran) Journal editorial board (international) – Discrete Mathematics and Theoretical Computer Science, A. Muscholl (2001 - ) – Discrete Mathematics and Theoretical Computer Science, P. Weil (1996-) – Fundamenta Informaticae, I. Walukiewicz (2008- ) – Groups, Complexity and Cryptography, P. Weil (2007-) – Information and Computation, B. Courcelle (until 2013) – Information and Computation, G. Sénizergues (2013–) – Information and Processing Letters, A. Muscholl (2008- ) – Journal of Logics and their applications, C. Retoré (2014-) – Leibniz International Proceedings in Informatics, P. Weil, president (2009-2015) F.3. FORMAL METHODS 313 – Logical Methods in Computer Science, B. Courcelle (2005- ) – RAIRO- Theoretical Informatics and Applications, P. Weil (2008-) Journal editorial board (national) – La Gazette des mathématiciens, C. Rétoré, (2008-)’ – Technique et Science Informatiques, A. Griffault (2008-2012) – Traitement automatique des langues, C. Rétoré, editor-in-chief (2004-2009) Research animation (international) – IFIP WG2.2 Formal description of programming concepts: I. Walukiewicz (president) Research animation (national) – GDR GPL “Génie de la Programmation et du Logiciel” : P. Castéran, co-head of GT “Langages TYpes et Preuves” – GDR IM “Informatique-Mathématique” : A. Muscholl, co-head of GT “Automata, Logic, Games and Algebra” Service as expert or evaluator Presidence of expert committee (national) – AERES evaluation LIX 2013 (Weil, president) Membership in expert committee (national) – AERES evaluation IBISC (H. Gimbert) – AERES evaluation Ecole doctorale Marseille 2011 (M. Mosbah) – AERES evaluation SAMOVAR 2013 (M. Mosbah) – AERES evaluation LIP6 (C. Retoré) – AERES evaluation LORIA, 2012 (M. Zeitoun) – Member of CNU section 27, 2011-2015 (M. Mosbah) – Hiring committee for an assistant professor, U. Paris Diderot, 2010 (H. Gimbert) – Hiring committee for an assistant professor (chaire), U. Paul Sabatier Toulouse, 2011 (A. Griffault) – Hiring committee for an assistant professor, IPB Bordeaux, 2011 (A. Griffault) – Hiring committee for an assistant professor, IRIT ENSEEIHT, 2012 (A. Griffault) – Hiring committee for an assistant professor, U. Bordeaux 1, 2012 (A. Griffault) – 2 hiring committees for assistant professors, IPB Bordeaux, 2010 (F. Herbréteau) – Hiring committee for an assistant professor, U. Aix-en-Provence, 2012, (J. Leroux) – Hiring committee for an assistant professor, U. Bordeaux 1, 2011 (J. Leroux) – Hiring committee for an assistant professor, U. Paris Diderot, 2010 (J. Leroux) – Hiring committee for a full professor, U. de Lorraine, 2009 (M. Mosbah) – Hiring committee for a full professor, IPB Bordeaux, 2012, 2013 (M. Mosbah) – Hiring committee for an assistant professor, IPB Bordeaux, 2010 (M. Mosbah) – Hiring committee for a full professor, INP Toulouse, 2012 (M. Mosbah) – Hiring committee for an assistant professor, U. Paris Diderot, 2010 (A. Muscholl) – Hiring committee for an assistant professor (chaire), U. Bordeaux, 2009 (A. Muscholl) – Hiring committee for a research assistant INRIA, INRIA Bordeaux, 2009 (A. Muscholl) – Hiring committee for an assistant professor, IUT U. Bordeaux 1, 2011 (A. Muscholl) – Hiring committee for a full professor, U. Paris 13 (C. Retoré) – Hiring committee for an assistant professor, U. Paris Sud, 2013, 2014 (A. Rollet) – Hiring committee for an assistant professor, U. Toulouse 3, 2010 (A. Rollet) – Hiring committee for an assistant professor, U. Versailles Saint Quentin, 2009 (A. Rollet) 314 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – Hiring committee for an assistant professor, IUT U. Bordeaux 1, 2013 (M. Zeitoun) – Hiring committee for an assistant professor, U. Bordeaux 1, 2012 (M. Zeitoun) – Hiring committee for a full professor, U. Rennes 1, 2010 (M. Zeitoun) Individual expert (reviewer) – Evaluation ANR 2011 (A. Griffault) – Evaluation ANR Blanc (C. Retoré) – Evaluation ANR Contint (C. Retoré) – Evaluation ANR Masses de Données (C. Retoré) – Evaluation ANR Blanc 2012 (P. Weil) – Evaluation ANR Blanc 2011 (P. Weil) – Evaluation ANR Blanc 2010 (P. Weil) Individual expert (reviewer), international – Evaluation OTKA (Hungarian Scientific Research Fund), 2013 (S. Lombardy) – Evaluation FWF (Autriche), 2012 (M. Mosbah) – Evaluation Israel Science Foundation, 2010 (A. Muscholl) – Evaluation Netherlands Organisation for Scientific Research (NWO), 2009 (A. Muscholl) – Evaluation DFG, Allemagne, 2013 (A. Muscholl) – Evaluation CONICYT (Chili), 2013 (P. Weil) – Evaluation FSF (Suisse), 2009 (P. Weil) – Evaluation OTKA (Hungarian Scientific Research Fund), 2009 (P. Weil) – Evaluation NSA (USA), 2009 (P. Weil) – Evaluation NSERC (Canada), 2012 (P. Weil) Membership in selection board – Jury d’admission CR INS2I, 2012 (P. Weil) – Jury d’admission CR INS2I, 2011 (P. Weil) – Jury d’admission DR CNRS, 2011 (P. Weil) Membership in prize jury – Evaluation IBM prize (Belgique), 2010 (J. Leroux) – EATCS Fellows Committee, 2014-2017 (A. Muscholl, president 2014) – Prize Board of Witold Lipski Prize (I. Walukiewicz) – Evaluation PhD prize GDR GPL 2012 (M. Mosbah) – Evaluation PhD prize GDR GPL 2013 (M. Mosbah) Reviewing of PhD or habilitation (international) – Thomas Brazdil, HDR Masaryk University, Brno, 2012 (Walukiewicz) – Tomasz Jurdzinski, HDR Wroclaw University, 2009 (Walukiewicz) – Manfred Kufleitner, HDR Universität Stuttgart, 2013 (Weil) – Christof Löding, HDR RTWH Aachen, 2009 (Walukiewicz) – – – – – Nizar Ben Neji, Tunis 2012 (Mosbah) Prakash Chandrasekaran, CMI Chennai, 2009 (Muscholl) Gaëlle Fontaine, Amsterdam University, 2010 (Walukiewicz) Sonia Gaied, Tunis, 2013 (Mosbah) Amaldaev Manuel, CMI Chennai, 2011 (Muscholl) Reviewing of PhD or habilitation (national) – Anne Bouillard, HDR ENS Paris 2014 (Lombardy) – Thomas Colcombet, HDR LIAFA, 2014 (Walukiewicz) F.3. FORMAL METHODS – – – – – Laurent Doyen, HDR ENS Cachan, 2012 (Walukiewicz) Thierry Géraud, HDR U. Paris Est, 2012 (Lombardy) Mathieu Lafourcade, HDR Université Montpellier 2, 2012 (Retoré) Malika More, HDR LAIC-LIMOS, 2009 (Muscholl) Myriam Quatrini, HDR I2M Aix-Marseille Université, 2014 (Retoré) – – – – – – – – – – – – – – – – – – – Nabil Ajam, Rennes, 2010 (Mosbah) Bertrand Boisvert, Université Toulouse 3, 2013 (Retoré) Florent Bouchy, ENS Cachan, 2009 (Zeitoun) Romain Brenguier, ENS Cachan, 2012 (Gimbert) Romain Brenguier, ENS Cachan, 2012 (Muscholl) Simon Clavière, U. Versailles, 2012 (Mosbah) Aiswarya Cyriac, ENS Cachan, 2014 (Muscholl) Axel Haddad, LIAFA, 2013 (Walukiewicz) Loic Jezéquel, U. Rennes 1, 2012 (Zeitoun) Loic Kervajan, Université de Provence, 2011 (Retoré) Fatma Krichen, U. Toulouse, 2013 (Mosbah) Denis Kupenberg, LIAFA, 2012 (Walukiewicz) Benjamin Monmège, ENS Cachan 2013 (Lombardy) Christophe Onambele, Université Paris 8, 2012 (Retoré) Florent Pompigne, Université de Lorraine, 2013 (Retoré) Johan Segura Université Montpellier 2, 2012 (Retoré) Lilia Sfaxi, Grenoble, 2012 (Mosbah) Nathalie Sznajder, ENS Cachan, 2009 (Walukiewicz) Camille Vacher, ENS Cachan, 2010 (Walukiewicz) Membership of PhD/habilitation committee (international) – Alexandre Decan, Université de Mons, Belgique, 2013 (Gauwin) – Marc Ducobu, Université de Mons, Belgique, 2013 (Gauwin) – Alessandro Facchini, U. Lausanne, 2010 (Zeitoun) – Julien Brusten, Université de Liège, 2011 (Leroux) – Jean-François Degbomont, Université de Liège, 2013 (Leroux) Membership of PhD/habilitation committee (national) – Dominique Archambault, HDR Université Paris 6, 2010 (Retoré) – Nicolas Bedon, HDR Université Paris-Est Marne-la-Vallée, 2010 (Weil) – Anas Abou Elkalam, HDR ENSEEIHT Toulouse, 2009 (Mosbah) – Pascal Desbarats, HDR Bordeaux I, 2010 (Mosbah) – Annie Foret, HDR Université Rennes 1, 2012 (Retoré) – Peter Habermehl, HDR LIAFA, 2009 (Muscholl) – Jérôme Leroux, HDR Bordeaux, 2012 (Muscholl) – Nicolas Markey, HDR ENS Cachan, 2011 (Muscholl) – Cyril Nicaud, HDR Université Paris-Est Marne-la-Vallée, 2010 (Weil) – Macha Nikolski, HDR Université Bordeaux-1, 2009 (Weil) – Lutz Strassburger, HDR Université Paris 7, 2011 (Retoré) – Tayssir Touili, HDR LIAFA, 2009 (Muscholl) – Assalé Adjé, LIX, 2011 (Leroux) – Pierre-Yves Angrand, Telecom ParisTech 2012 (Lombardy) – Rodrigo Assar Cuevas, Université Bordeaux-1, 2011 (A. Griffault) 315 316 – – – – – – – – – – – – – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Florent Avellaneda, Université de Marseille, 2013 (Leroux) Paul Bédaride, Université Nancy 1, 2010 (Retoré) Johann Brault-Baron, Caen, 2013 (Courcelle) Florent Bouchy, ENS Cachan, 2009 (Leroux) Pierre Bourhis, INRIA Saclay, 2011 (Muscholl) Antoine Durand-Gasselin, LIAFA, 2013 (Walukiewicz) Quentin Enard, Bordeaux I, 2013 (Mosbah) Mathieu Jamai, Lille, 2013 (Mosbah) Fabien Kuntz, Bordeaux I, 2013 (Mosbah) Samir Medjiah, Bordeaux I, 2012 (Mosbah) O. L. Nguena Timo, U. Bordeaux 1, 2009 (Zeitoun) Youssouf Oualhadj, U. Bordeaux 1, 2012 (Zeitoun) Thomas Place, ENS Cachan, 2010 (Zeitoun) Thomas Place, ENS Cachan, 2010 (Walukiewicz) Vincent Rabeu, Bordeaux I, 2013 (Mosbah) Guillaume Rivière, Université Bordeaux-1, 2009 (Weil) Arnaud Sallabery, Université Bordeaux 1, 2011 (Retoré) Peter Schrammel, Université de Grenoble, 2012 (Leroux) Jan Stoecker, INP Grenoble, 2009 (A. Griffault) A. Sundararaman, ENS Cachan, 2010 (Zeitoun) Nathalie Sznajder, ENS Cachan, 2009 (Zeitoun) Wiem Tounsi, Télécom Bretagne, Rennes, 2014, (Mosbah) Scientific collaborations Projects (international) – AVeRTS Franco-Indian ICST project, with IIT Bombay, Chennai Mathematical Institute, INRIA Rennes, 2014-2018. (F. Herbréteau, I. Walukiewicz) – GAMES (Games for Design and Verification), ESF Research Networking Programme, 2008-2013. Partners: Vienna University of Technology, Austria; Université Libre de Bruxelles, Belgium; Helsinki University of Technology, Finland; RWTH Aachen University, Germany; University of Udine, Italy; University of Luxembourg, Luxembourg; CWI and University of Amsterdam, The Netherlands; Warsaw University, Poland; Uppsala University, Sweden; EPFL Lausanne, Switzerland; Oxford University, United Kingdom – LIA Informel (INdo-French FORmal MEthods Lab), CNRS, ENS Cachan, U. Bordeaux, Chennai Mathematical Institute (CMI), Institute of Mathematical Sciences (IMSc, Chennai) and Indian Institute of Sciences (IISc, Bangalore). – PHC France-Italy (GALILEE) with University of Padova - Italy “Sécurité de protocoles distribués”, 2014. (M. Mosbah) – SAFE, Safe Automotive soFtware architEcture, UE project, 2011–2014. (A. Griffault) – Royal Society grant with University of Liverpool “Specification and Verification of Infinite-State Systems: Focus on Data”. 2011-2013. (J. Leroux) – VAUCANSON2 (Développement de la plateforme Vaucanson), ANR blanc international with Taiwan, 2011-2014. (S. Lombardy) Projects (national) – ANR BINCOA, Symbolic Methods for BINary Code Analysis, ANR ARPEGE, 2009-2012. (A. Vincent) – ANR ExStream, Extensions of stream processing, ANR JCJC, 2014-2018. (O. Gauwin) – ANR FREC, Frontiers of recognizability, ANR BLANC, 2010-2014. (P. Weil) F.3. FORMAL METHODS 317 – ANR Impex, Intégration des sémantiques implicite et explicite dans les développements de systèmes discrets fondés sur la preuve, ANR INSE, 2013-2015. (P. Castéran) – ANR INEDIT, Interactivité dans l’écriture du temps, ANR CONTINT, 2012-2015. (D. Janin) – ANR LOCI, Locativity and interactivity in logic, linguistics and theoretical computer science), ANR Blanc, 2010-2014. (Ch. Rétoré) – ANR POLYMNIE, Parsing and synthesis with abstract categorial grammars: from lexicon to discourse, ANR CONTINT, 2012-2015. (Ch. Rétoré) – ANR REACHARD, Taming Hard Reachability Problems for Counter Systems, ANR Blanc (SIMI 2), 2011-2014. (J. Leroux) – ANR Stoch-MC, Modèles stochastiques: passage à l’échelle pour le Model Checking, ANR Blanc, 20142018. (H. Gimbert) – ANR VACSIM, Validation de la commande des systèmes critiques par couplage simulation et méthodes d’analyse formelle, ANR INS 2011-2015. (A. Rollet) – CoLan PEPS Humanités, Mathématiques, Informatique Complexité et Langage : une étude formelle et expérimentale des mécanismes de compréhension, 2013-2014. (Ch. Rétoré) – MARSHAL, FUI project (Fonds Unique Interministériel), 2012-2014. (E. Fleury) – Synthesis of Stream Processors, PEPS CNRS, 2013-2015. (O. Gauwin) – Stochastic Games for Verification, PEPS 2011-2013. (H. Gimbert) Joint publications (international) – Michele Abrusci, Roma Italy (Retore) – Jorge Almeida, Porto (Zeitoun) – Michael Benedikt, Oxford (Puppis) – Achim Blumensath, Darmstadt (Courcelle) – Bernard Boigelot, Liège (Leroux, Herbreteau) – Mikolaj Bojanczyk, Warsaw U. (Muscholl, Walukiewicz, Place) – Thomas Brihaye, Mons (Gimbert) – Véronique Bruyère, Mons (Gimbert, Gauwin) – Krishnendu Chatterjee, IST Austria (Gimbert) – Lorenzo Clemente, Bruxelles (Herbreteau, Sutre) – Mauro Conti, Padova (Mosbah) – José Carlos Costa, U. Minho (Zeitoun) – Alfredo Costa, U.Coimbra Portugal (Zeitoun) – Volker Diekert, Stuttgart (Muscholl, Weil) – Joost Engelfriet, Leiden U. (Courcelle) – Zoltan Esik, Szeged Hungary (Weil) – Emmanuel Filliot, Bruxelles (Gauwin) – Makoto Kanazawa, NII Tokyo (Salvati) – Daniel Kirsten, Berlin (Lombardy) – Gregory M. Kobele, U. Chicago (Salvati) – Daniel Kroening, Oxford (Leroux) – Manfred Kufleitner, Stuttgart (Weil) – Kim G. Larsen, Aalborg, Denmark (Rollet) – Christof Loeding, Aachen Germany (Walukiewicz) – Angelo Montanari, Udine Italy (Puppis) – Michael Moortgat, Utrecht, Netherlands (Moot) – Damian Niwinski, Warsaw U. (Walukiewicz) – Pawel Parys, Warsaw U. (Walukiewicz) 318 – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS M. Praveen, CMI Chennai (Sutre, Leroux) Sven Schewe, U. Liverpool (Muscholl) Thomas Schwentick, Dortmund (Muscholl) Helmut Seidl, Munich (Leroux, Muscholl) Frederic Servais, Bruxelles (Gauwin) Pedro Silva, Porto (Weil) B. Srivathsan, CMI Chennai India (Walukiewicz, Herbreteau) Howard Straubing, Boston (Walukiewicz) Zhilin Wu, Academy of Sciences, China (Muscholl, Ly) Habib Youssef, Sousse Tunisia (Mosbah) Joint publications (national) – S. Abiteboul, LSV Cachan (Muscholl) – A. Akhavi, Greyc Caen (Lombardy) – M. Amblard, LORIA Nancy (Retore) – G. Audemard, CRIL Lens (Simon) – S. Bardin, CEA Paris (Leroux, Vincent, Ly) – F. Bassino, LIPN Paris-Nord (Weil) – M.P. Béal, LIGM, Paris-Est (Lombardy) – N. Bertrand, IRISA Rennes (Gimbert) – B. Bollig, LSV Cachan (Zeitoun) – P. Bourhis, LIFL Lille (Muscholl, Puppis) – A. Carayol, LIGM Paris-Est (Walukiewicz) – O. Carton, LIAFA, Paris (Lombardy, Puppis) – J.M. Champarnaud, LITIS Rouen (Lombardy) – Th. Colcombet, LIAFA, Paris (Lombardy, Puppis) – J.M. Couvreur, LIFO Orléans (Weil) – Y. Falcone, LIG Grenoble (Rollet) – A. Finkel, LSV Cachan (Leroux, Zeitoun) – P. Gastin, LSV Cachan (Zeitoun) – B. Genest, IRISA Rennes (Gimbert, Muscholl, Walukiewicz) – L. Goubin, PRISM Versailles (Ly) – F. Horn, LIAFA Paris (Gimbert) – T. Jerron, IRISA Rennes (Rollet) – M. Kanté, LIMOS Clermont-Ferrand (Courcelle) – I. Klimann, LIAFA Paris (Lombardy) – J. Mairesse, LIAFA Paris (Lombardy) – D. Mery, LORIA Nancy (Mosbah) – C. Nicaud, LIGM Paris-Est (Weil) – J. Niehren LIFL, Lille (Gauwin) – D. Perrin, LIGM, Paris-Est (Lombardy) – M. Picantin, LIAFA Paris (Lombardy) – S. Pogodalla, INRIA Nancy (Retore) – D. Poitrenaud, LIP6, Paris (Weil) – O. Ponsini, I3S, Nice (Rollet) – P.A. Reynier LIF Marseille (Gauwin) – J. Sakarovitch, ENST Paris (Lombardy) – S. Salva, LIMOS Clermont-Ferrand (Rollet) F.3. FORMAL METHODS – – – – L. Segoufin, LSV Cachan (Place, Muscholl) J.M. Talbot, LIF Marseille (Gauwin) S. Tison LIFL, Lille (Gauwin) W. Zielonka, LIAFA Paris (Gimbert) Research visitors (international) – Bharat Adsul, IIT Bombay (6 weeks, jun-jul 2013) – Jorge Almeida, Porto (6 months, feb-aug 2012) – Namit Chaturvedi, RWTH Aachen (1 week, mar 2014) – José Carlos Costa, U. Minho (1 week, apr 2012) – Alfredo Costa, U. Coimbra (1 week, jun 2012) – Volker Diekert, Stuttgart (1 month, mar 2011) – Makoto Kanazawa, NII Tokyo (1 month, apr/sep 2011) – Gregory M. Kobele, U. Chicago (1 month, apr-may 2012) – Manfred Kufleitner, U. Stuttgart (1 week, sep 2013) – Salvatore La Torre, U. Salerno (1 month, may-jun 2014) – Zhaohui Luo, University of London (1 month, nov/dec 2011) – Amaldev Manuel, postdoc LIAFA (3 months, oct-dec 2012) – Alexei Miasnikov, Stevens Institute of Technology, Hoboken, jan 2011 – Sven Schewe, U. Liverpool (1 month, sep 2012, jan 2013) – Srivathsan, CMI Chennai (2 weeks, jun 2014) – Zhilin Wu, Academy of Sciences, China (may-jul 2012) Research visits (international) – Castéran : Tsinghua U., Suzhou, ECNU Shanghai, China - (2009,2010,2011,2012) – Gimbert : Mons U., Belgium 2011 – Gimbert : IPAL, Singapour 2013 – Herbreteau : IIT Bombay, India 2011 – Herbreteau : Liège, Belgium 2011 – Janin : York U., UK 2012 – Janin : Herriot Watt University, UK 2013 – Janin : Yale University, USA 2013 – Janin : Bristol University, UK 2013 – Janin : Darmstadt University, Germany 2012, 2013 – Leroux : Liverpool U., UK, 2013 – Muscholl : Warsaw University, Poland 2012 – Puppis : Oxford U, UK, 2012 – Retore : Verona, Italy 2010 – Salvati : Tokyo, Japan 2009, 2010, 2011, 2012 – Walukiewicz : Warsaw University, Poland 2012 – Weil : IIT Delhi, India 2007-2009 – Weil : Stevens Inst. of Technology, Hoboken, USA 2009, 2010 – Weil : U. Fribourg, Switzerland 2009 – Weil : U. Stuttgart, Germany 2011 – Weil : CMI Chennai, India 2012, 2013, 2014 – Zeitoun : Porto, Portugal 2013 319 320 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Invited talks – ASL’14, 2014 (S. Salvati) – ATVA’13, Hanoi, Vietnam: J. Leroux (talk and tutorial) – ATVA’10, Singapore (I. Walukiewicz) – AutoMathA 2009, Conference of the AutoMathA programme, Liege, Belgium (I. Walukiewicz) – Barcelona Week-end in Group Theory, Barcelona, 2014 (P. Weil) – On the Posterity of Büchi (Logic and Automata) Swiss Society for Logic and Philosophy, Annual Meeting, Lausanne 2011 (I. Walukiewicz) – CAI’09, Thessaloniki, Greece (B. Courcelle) – CONCUR’10, Paris (A. Muscholl) – Conference on Geometric and Asymptotic Group Theory and Applications, Hoboken, 2009 (P. Weil) – Conference on Geometric and Combinatorial Methods in Group Theory and Semigroup Theory, Lincoln, 2009 (P. Weil) – Conference on Geometric and Asymptotic Group Theory and Applications, Montréal, 2010 (P. Weil) – Conference on Automorphisms of free groups, Barcelona, 2012 (P. Weil) – Conference on Geometric and Asymptotic Group Theory and Applications, New York, 2013 (P. Weil) – Conference on Semigroups, Algebras and Operator Theory, Kochi, 2014 (P. Weil) – CSR’14, Moscow, Russia (I. Walukiewicz) – DIMAP workshop on Algorithmic Graph Theory, Warwick, 2009 (B. Courcelle) – Durham workshop on graphs and application, 2013 (B. Courcelle) – ESSLLI’09, Bordeaux (B. Courcelle) – EuroComb’09, Bordeaux (B. Courcelle) – EWM summerschool, Leiden, the Netherlands, 2011 (A. Muscholl) – Formal grammar 19th, Tübingen, 2014 (C. Retoré) – FSTTCS’10, Chennai, India (B. Courcelle) – GAMES’12 Napoli, Italy (H. Gimbert) – GAMES’12, Napoli, Italy (A. Muscholl) – Winter GAMES School 2013, Champéry, Switzerland (I. Walukiewicz, tutorial) – Winter GAMES School 2013, Champéry, Switzerland (A. Muscholl, tutorial) – GASSICS’11 (H. Gimbert) – GPMFV’10 (H. Gimbert) – GROW’11, Daejon, Korea (B. Courcelle) – GROW’13, Santorini, Greece (B. Courcelle) – Groups in Galway, Galway, 2013 (P. Weil) – Highlights’13, Paris (J. Leroux, tutorial) – Highlights of AutoMathA 2010 conference of the programme ESF AutoMathA, Vienna, Austria (I. Walukiewicz) – Higher Order Schemes, Paris, 2010 (G. Sénizergues) – IHP trimester on Semantics of proofs and certified mathematics 2014 (S. Salvati) – 7th workshop on Lambda Calculus and Formal Grammars, Bordeaux, 2009 (G. Sénizergues) – LATA’09, Tarragona, Spain (B. Courcelle) – LATA’10, Trier, Germany (A. Muscholl) – LATA’11, Tarragona, Spain (J. Leroux) – MCFG+ 2010 (S. Salvati) – MCFG+2 2011 (S. Salvati) – MFCS’12, Bratislava, Slovakia (I. Walukiewicz) – Thirteenth NBSAN meeting, November 2012, York, UK (D. Janin) F.3. FORMAL METHODS – – – – – – – – – – – – 321 PAVAS’11, Cachan, France (J. Leroux, tutorial) Reachability Problems 2011, Genova, Italy (B. Courcelle) Reachability Problems 2012, Bordeaux (I. Walukiewicz) Joint SAMS-AMS Conference, Special Session on Combinatorial and Computational Group Theory and Applications, Port Elizabeth, 2011 (P. Weil) SOFSEM’14, Nový Smokovec, High Tatras, Slovakia (D. Janin) Sri K. Lakshaman Memorial Distinguished Lecture, Chennai Mathematical Institute, 2014 (P. Weil) Journée «Théorie des Jeux et Informatique», Paris, 2009 (I. Walukiewicz) TU Dresden PhD Programme QuantLA, spring school, 2013 (A. Muscholl, tutorial) VPT@CAV’13, Saint Petersburg, Russia (J. Leroux) WoLLIC’12, Buenos Aires, Argentina (A. Muscholl) WoLLIC’09, Tokyo, Japan (S. Salvati) Workshop on Automata, Logic, Formal languages, and Algebra 2013, Riga (M. Zeitoun) F.3.3 Involvement with social, economic and cultural actors Collaborations with the industry Industrial contracts – Contract with Thales Avionics Toulouse “Modèles AltaRica et algorithmes pour le diagnostic”, may 2010 – apr 2011. – Collaboration with VITIROVER SAS, France within the EU project VVINNER (Vineyard Vigilant & INNovative Ecological Rover), 2012-2015 Collaborations outside of universities – Collaboration with ClearSy Safety Critical Systems Engineering within the ANR project RIMEL (ANR “Sécurité et Informatique”, 2007 - 2010) – Collaboration with EDF R&D, Dassault Systèmes within the ANR project Vacsim (ANR INS 2011-2015) Start-ups – Rhoban System S.A.S: since jan 2012. Ingénierie conseil en Robotique General audience actions Learned society, federation (national) – Member of scientific council of SIF (Muscholl) Scientific popularization, dissemination of scientific culture – “Fête de la science” oct 2010, several scientific presentations for highschools (LLI team) – Forum des métiers, collège Alain Fournier, Bordeaux (Weil, 2013) – International exhibition EXPO 2012, Yeosu Korea 2012, French pavillon (Gimbert, Ly) – Introduction to Computer Science for highschools “Initiation à l’informatique”, with Institut Régional de Recherche sur l’Enseignement des Mathématiques, 2010-2014 (Rétoré) – Organization of a short visit of LaBRI by a group of students of ENS Cachan, and coordination of scientific presentations of members of LaBRI 2013 (Place, Zeitoun) – Participation at “Des enseignants dans les laboratoires”, CNRS and Rectorat de Bordeaux, 2014 (Weil, Zeitoun) – Participation at the exhibition “Mathissimes” (Gimbert, jan 2012) – Presentation of research employments (métiers de la recherche), ENSEIRB-Matmeca (Weil, 2013 and 2014) – Presentations for colleges (classes de 6ème, 4ème), 2013 “Maths à modeler” (Zeitoun) – Presentations for highschools (classes de 1ère S) and introduction to Computer Science (Zeitoun) 322 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – Presentations at the forum “Maths en jeans”, apr 2014 (Zeitoun) – Presentation for primary schools (CP/CE1), Ecole Martinon Gradignan, 2014 (Muscholl) – RIEL: Teaching research in Computer Science for undergraduates (Dicky, Zeitoun, 2012 et 2013) – Robot presentation “Ergo-robots” at the mathematics exhibition “Mathématiques, un dépaysement soudain”, Fondation Cartier, 2011 (Gimbert, Ly) – Robocup 2014, Bresil (Gimbert, Ly) – Scientific animation for general audience at Cap Science Bordeaux about game theory (Gimbert, Oualhadj dec 2009) – Seminar “Unithé ou café”, INRIA Bordeaux Sud-Ouest “Un peu de nuance dans une logique de brutes: la question du sens en linguistique informatique”, 2010 (Rétoré) – Seminar “Parler et comprendre : processus cognitifs et modèles informatiques de la faculté langage” proposée par l’Asco et club cognitique, Bordeaux, Université Bordeaux 2 Victor Ségalen, 2010 (Rétoré) Publications for large audience – Alain Finkel, Jérôme Leroux: Neue, einfache Algorithmen für Petrinetze. Informatik Spektrum 37(3): 229-236 (2014) – Edition of write-ups of “Leçons de Mathématiques d’Aujourd’hui” published by Cassini (Sénizergues) F.3.4 – – – – – – – – – – – – – – – – – – – – – – – – – – – – Master, predoc and postdoc researchers S. Agrawal : undergraduate internship , 2009 (Zeitoun, Leroux, Vincent) R. Bonnin, master internship 2012 (Gimbert) P. Brunet, master internship ENS Cachan, 2009 (Clément, Retoré) R. Cheval, master internship ENS Cachan 2012 (Gimbert) Aakash Deshpande, internship IIT Bombay, 2014 (Herbreteau, Walukiewicz) Etienne Dubourg, master internship 2012 (Sénizergues) R. Duvignau, master internship 2012 (Muscholl, Gauwin) R. Duvignau, master internship M1, 2011 (Gimbert, Muscholl) Michael Färber, master internship & master thesis Innsbruck, 2013 (Sénizergues, Cezary Kaliszyk) Julien Ferté, master internship, MPRI Paris 7, 2009 (Sénizergues) T. Godin, master internship 2014 (Gimbert, Muscholl) Vipul Harsh, internship IIT Bombay, 2013 (Leroux, Sutre) E. Kelmendi, master internship 2013 (Gimbert) E. Kien, master internship ENS Cachan, 2010 (Retoré, Salvati) J. Kirman, master internship 2010 (Clément, Salvati) O. Lacroix, master internship 2011 (Retoré) Kevin Laverny, master internship 2013 (Herbreteau, Walukiewicz) J. Ledent, internship undergraduate ENS Lyon, 2013 (Muscholl, Salvati) Umang Mathur, internship IIT Bombay, 2013 (Herbreteau, Walukiewicz) Y. Oualhadj, master internship 2010 (Gimbert) J. Pautrizel, master internship 2013 (Muscholl, Gauwin) C. Pennarun, master internship M1, 2013 (Muscholl, Salvati) V. Pennelle, master internship 2011 (Leroux, Sutre) Prajwal A N, internship IIT Bombay, 2012 (Herbreteau, Walukiewicz) Cédric Ramassamy, master internship 2009 (Rollet) T. Rocher, master internship 2014 (Muscholl, Salvati) Noemie Sandillon-Rezer, master internship 2011 (Sénizergues, Moot) Siddharth K., internship CMI Chennai, 2012 (Muscholl, Gimbert) F.3. FORMAL METHODS – – – – – – – – – – Aditya Tiwari, internship IIT Bombay, 2011 (Herbreteau, Walukiewicz) Sukriti Bhattacharya, postdoc (2013, Fleury), 12 months Laurent Braud, postdoc (2011-2012, Salvati, Sénizergues), 12 months Lorenzo Clemente, postdoc (2011-2013, Herbreteau, Sutre, Walukiewicz), 24 months Julien Ferté, ATER 2012, 6 months Omer Nguena-Timo, postdoc (2009-2011, 2012-2013, Rollet), 24 months Fabio Pasquali, postdoc (2014, Retoré), 12 months Manjunatha Praveen, postdoc (2013, Leroux, Sutre), 12 months Patrick Totzke, postdoc (2014, Leroux, Sutre), 8 months Zhilin Wu, postdoc (2009, Muscholl), 12 months 323 324 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS F.4. MABIOVIS F.4 F.4.1 325 Models and Algorithms for Bio-informatics and Information Visualisation Scientific production Publications Peer-reviewed journals (international) [RI1] J. Allali, C. Chauve, P. Ferraro, and A.-L. Gaillard, Efficient chaining of seeds in ordered trees, Journal of Discrete Algorithms, (2012). [RI2] J. Allali, P. Ferraro, P. Hanna, C. Iliopoulos, and M. Robine, Toward a general framework for polyphonic comparison, Fundamenta Informaticae, 97 (2009), pp. 331–346. [RI3] J. Allali, C. Saule, C. Chauve, Y. D’Aubenton-Carafa, A. Denise, C. Drevet, P. Ferraro, D. Gautheret, C. Herrbach, F. Leclerc, A. De Monte, A. Ouangraoua, M.-F. Sagot, M. Termier, C. Thermes, and H. Touzet, Brasero: A resource for benchmarking rna secondary structure comparison algorithms, Advances in Bioinformatics, 2012 (2012), p. 5 pages. [RI4] P. Almeida, C. Gonçalves, S. Teixeira, D. Libkind, M. Bontrager, I. Masneuf-Pomarède, W. Albertin, P. Durrens, D. J. Sherman, P. Marullo, C. Todd Hittinger, P. Gonçalves, and J. P. Sampaio, A gondwanan imprint on global diversity and domestication of wine and cider yeast saccharomyces uvarum., Nature Communications, 5 (2014), p. 4044. [RI5] D. Archambault, T. Munzner, and D. Auber, Tugging graphs faster: Efficiently modifying pathpreserving hierarchies for browsing paths, IEEE Transactions on Visualization and Computer Graphics, (2010). [RI6] D. Archambault, H. Purchase, and B. Pinaud, Animation, small multiples, and the effect of mental map preservation in dynamic graphs, IEEE Transactions on Visualization and Computer Graphics, 17 (2011), pp. 539–552. [RI7] R. Assar, A. V. Leisewitz, A. Garcia, N. C. Inestrosa, M. A. Montecino, and D. J. Sherman, Reusing and composing models of cell fate regulation of human bone precursor cells., BioSystems, 108 (2012), pp. 63–72. [RI8] R. Assar, M. A. Montecino, A. Maass, and D. J. Sherman, Modeling acclimatization by hybrid systems: Condition changes alter biological system behavior models., BioSystems, (2014). [RI9] R. Assar and D. J. Sherman, Implementing biological hybrid systems: Allowing composition and avoiding stiffness, Applied Mathematics and Computation, (2013). [RI10] D. Auber, C. Huet, A. Lambert, B. Renoust, A. Sallaberry, and A. Saulnier, Gospermap: Using a gosper curve for laying out hierarchical data, IEEE Transactions on Visualization and Computer Graphics, 19 (2013), pp. 1820 – 1832. [RI11] G. Blin, P. Bonizzoni, R. Dondi, R. Rizzi, and F. Sikora, Complexity insights of the minimum duplication problem, Journal of Theoretical Computer Science (TCS), ? (2014), p. 29 pp. [RI12] G. Blin, P. Bonizzoni, R. Dondi, and F. Sikora, On the parameterized complexity of the repetition free longest common subsequence problem, Information Processing Letters, 112 (2012), pp. 272–276. [RI13] G. Blin, M. Crochemore, S. Hamel, and S. Vialette, Median of an odd number of permutations, Pure Mathematics and Applications, 21 (2011), pp. 161 – 175. [RI14] G. Blin, A. Denise, S. Dulucq, C. Herrbach, and H. Touzet, Alignments of rna structures., IEEE/ACM Transactions on Computational Biology and Bioinformatics, 7 (2010), pp. 309–322. 326 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI15] G. Blin, D. C. Faye, and J. Stoye, Finding nested common intervals efficiently, Journal of Computational Biology, 17 (2010), pp. 1183–1194. [RI16] G. Blin, D. Nury, S. Stefanovic, T. Neri, O. Guillevic, B. Brinon, V. Bellamy, C. Rücker-Martin, P. Barbry, A. Bel, L. Bonnevie, P. Bruneval, C. Cowan, J. Pouly, S. Mitalipov, E. Gouadon, P. Binder, A. Hagège, M. Desnos, P. Menasché, J.-F. Renaud, and M. Pucéat, A purified population of multipotent cardiovascular progenitors derived from primate pluripotent stem cells engrafts in postmyocardial infarcted nonhuman primates., J Clin Invest, 120 (2010), pp. 1125–39. [RI17] G. Blin, R. Rizzi, F. Sikora, and S. Vialette, Minimum mosaic inference of a set of recombinants, International Journal of Foundations of Computer Science, 24 (2013), pp. 51–66. [RI18] G. Blin, R. Rizzi, and S. Vialette, A faster algorithm for finding minimum tucker submatrices, Theory of Computing Systems, 51 (2012), pp. 270–281. [RI19] G. Blin, F. Sikora, and S. Vialette, Querying graphs in protein-protein interactions networks using feedback vertex set, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 7 (2010), pp. 628–635. [RI20] E. Bon, A. Delaherche, E. Bilhere, A. De Daruvar, A. Lonvaud-Funel, and C. Le Marrec, Oenococcus oeni genome plasticity is associated with fitness, Applied and Environmental Microbiology, 75 (2009), pp. 2079–90. [RI21] F. Boudon, C. Preuksakarn, P. Ferraro, J. Diener, P. Nacry, E. Nikinmaa, and C. Godin, Quantitative assessment of automatic reconstructions of branching systems obtained from laser scanning., Annals of Botany, (2014). [RI22] J. Bourbeillon, S. Orchard, I. Benhar, C. Borrebaeck, A. De Daruvar, S. Dübel, R. Frank, F. Gibson, D. Gloriam, N. Haslam, T. Hiltker, I. Humphrey-Smith, M. Hust, D. Juncker, M. Koegl, Z. Konthur, B. Korn, S. Krobitsch, S. Muyldermans, P.-A. Nygren, S. Palcy, B. Polic, H. Rodriguez, A. Sawyer, M. Schlapshy, M. Snyder, O. Stoevesandt, M. J. Taussig, M. Templin, M. Uhlen, S. Van Der Maarel, C. Wingren, H. Hermjakob, and D. J. Sherman, Minimum information about a protein affinity reagent (miapar)., Nature Biotechnology, 28 (2010), pp. 650–3. [RI23] A. B. Canelas, N. Harrison, A. Fazio, J. Zhang, J.-P. Pitkänen, J. Van Den Brink, B. M. Bakker, L. Bogner, J. Bouwman, J. I. Castrillo, A. Cankorur, P. Chumnanpuen, P. Daran-Lapujade, D. Dikicioglu, K. Van Eunen, J. C. Ewald, J. J. Heijnen, B. Kirdar, I. Mattila, F. I. C. Mensonides, A. Niebel, M. Penttilä, J. T. Pronk, M. Reuss, L. Salusjärvi, U. Sauer, D. J. Sherman, M. Siemann-Herzberg, H. Westerhoff, J. De Winde, D. Petranovic, S. G. Oliver, C. T. Workman, N. Zamboni, and J. Nielsen, Integrated multilaboratory systems biology reveals differences in protein metabolism between two reference yeast strains., Nature Communications, 1 (2010), p. 145. [RI24] M. Courtot, N. Juty, C. Knüpfer, D. Waltemath, A. Zhukova, A. Dräger, M. Dumontier, A. Finney, M. Golebiewski, J. Hastings, S. Hoops, S. Keating, D. B. Kell, S. Kerrien, J. Lawson, A. Lister, J. Lu, R. Machne, P. Mendes, M. Pocock, N. Rodriguez, A. Villeger, D. J. Wilkinson, S. Wimalaratne, C. Laibe, M. Hucka, and N. Le Novère, Controlled vocabularies and semantics in systems biology., Molecular Systems Biology, 7 (2011), p. 543. [RI25] L. Despons, P. Baret, L. Frangeul, V. Louis, P. Durrens, and J.-L. Souciet, Genomewide computational prediction of tandem gene arrays: application in yeasts., BMC Genomics, 11 (2010), p. 56. [RI26] E. Dordet-Frisoni, E. Baranowski, A. Barré, A. Blanchard, M. Breton, C. Couture, V. Dupuy, P. Gaurivaud, D. Jacob, C. Lemaitre, L. Manso-Silván, M. Nikolski, L.-X. Nouvel, F. Poumarat, P. Sirand-Pugnet, P. Thébault, S. Theil, F. Thiaucourt, C. Citti, F.4. MABIOVIS 327 and F. Tardy, Draft genome sequences of mycoplasma auris and mycoplasma yeatsii, two species of the ear canal of caprinae, Genome Announcements, 1 (2013). [RI27] P. Durrens, T. Martin, and D. J. Sherman, The génolevures database, Comptes Rendus de l’Académie des Sciences, Série Biologies, 334 (2011), pp. 585–589. [RI28] C. Ducruet, C. Rozenblat, and F. Zaidi, Ports in multi-level maritime networks: Evidence from the atlantic (1996-2006), Journal of Transport Geography, 18 (2010), pp. 508–518. [RI29] C. Ducruet and F. Zaidi, Maritime constellations: A complex network approach to shipping and ports, Maritime Policy and Management, 39 (2012), pp. 151–168. [RI30] V. Dupuy, L. Manso-Silván, V. Barbe, P. Thebault, E. Dordet-Frisoni, C. Citti, F. Poumarat, A. Blanchard, M. Breton, P. Sirand-Pugnet, and F. Thiaucourt, Evolutionary history of contagious bovine pleuropneumonia using next generation sequencing of mycoplasma mycoides subsp. mycoides "small colony"., PLoS ONE, 7 (2012). [RI31] V. Dupuy, P. Sirand-Pugnet, E. Baranowski, A. Barré, M. Breton, C. Couture, E. Dordet-Frisoni, P. Gaurivaud, D. Jacob, C. Lemaitre, L. Manso-Silván, M. Nikolski, L.-X. Nouvel, F. Poumarat, F. Tardy, P. Thébault, S. Theil, C. Citti, A. Blanchard, and F. Thiaucourt, Complete genome sequence of mycoplasma putrefaciens strain 9231, one of the agents of contagious agalactia in goats, Genome Announcements, 1 (2013). [RI32] J. Durand, C. Bodénès, E. Chancerel, J.-M. Frigerio, G. Vendramin, F. Sebastiani, A. Buonamici, O. Gailing, H.-P. Koelewijn, F. Villani, C. Mattioni, M. Cherubini, P. G. Goicoechea, A. Herrán, Z. Ikaran, C. Cabané, S. Ueno, F. Alberto, P.-Y. Dumoulin, E. Guichoux, A. De Daruvar, A. Kremer, and C. Plomion, A fast and cost-effective approach to develop and map est-ssr markers: oak as a case study., BMC Genomics, 11 (2010), p. 570. [RI33] W. Dyrka, M. M. Bartuzel, and M. Kotulska, Optimization of 3d poisson-nernst-planck model for fast evaluation of diverse protein channels, Proteins: Structure, Function, and Bioinformatics, (2013). [RI34] W. Dyrka, J.-C. Nebel, and M. Kotulska, Probabilistic grammatical model for helix-helix contact site classification, Algorithms for Molecular Biology, 8 (2013), p. 31. [RI35] F. El Gharniti, M. Dols-Lafargue, E. Bon, O. Claisse, C. Miot-Sertier, A. LonvaudFunel, and C. Le Marrec, Is30 elements are mediators of genetic diversity in oenococcus oeni., International Journal of Food Microbiology, 158 (2012), pp. 14–22. [RI36] A. Enache-Angoulvant, J. Guitard, F. Grenouillet, T. Martin, P. Durrens, C. Fairhead, and C. Hennequin, Rapid discrimination between candida glabrata, candida nivariensis, and candida bracarensis by use of a singleplex pcr, Journal of Clinical Microbiology, 49 (2011), pp. 3375–3379. [RI37] D. C. Faye, O. Curé, and G. Blin, A survey of rdf storage approaches, Revue Africaine de la Recherche en Informatique et Mathématiques Appliquées, 15 (2012). [RI38] H. Ferry-Dumazet, L. Gil, C. Deborde, A. Moing, S. Bernillon, D. Rolin, M. Nikolski, A. De Daruvar, and D. Jacob, Mery-b: a web knowledgebase for the storage, visualization, analysis and annotation of plant nmr metabolomic profiles., BMC Plant Biology, 11 (2011), p. 104. [RI39] T. Gabaldón, T. Martin, M. Marcet-Houben, P. Durrens, M. Bolotin-Fukuhara, O. Lespinet, S. Arnaise, S. Boisnard, G. Aguileta, R. Atanasova, C. Bouchier, A. Couloux, S. Creno, J. Almeida Cruz, H. Devillers, A. Enache-Angoulvant, J. Guitard, L. Jaouen, L. Ma, C. Marck, C. Neuvéglise, E. Pelletier, A. Pinard, J. Poulain, J. Recoquillay, E. Westhof, P. Wincker, B. Dujon, C. Hennequin, and C. Fairhead, Comparative genomics of emerging pathogens in the candida glabrata clade., BMC Genomics, 14 (2013), p. 623. 328 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI40] E. Garnaud, S. Maabout, and M. Mosbah, Les dépendances fonctionnelles pour la sélection de vues dans les cubes de données, Journal of Decision Systems, 21 (2012), pp. 71–91. [RI41] E. Garnaud, S. Maabout, and M. Mosbah, Functional dependencies are helpful for partial materialization of data cubes, Annals of Mathematics and Artificial Intelligence, (2013), pp. 1–20. [RI42] V. Garcia, R. Stevens, L. Gil, L. Gilbert, N. Gest, J. Petit, M. Faurobert, M. Maucourt, C. Deborde, A. Moing, J.-L. Poessel, D. Jacob, J.-P. Bouchet, J.-L. Giraudel, B. Gouble, D. Page, M. Alhagdow, C. Massot, H. Gautier, M. Lemaire-Chamley, A. De Daruvar, D. Rolin, B. Usadel, M. Lahaye, M. Causse, P. Baldet, and C. Rothan, An integrative genomics approach for deciphering the complex interactions between ascorbate metabolism and fruit growth and composition in tomato., Comptes Rendus Biologies, 332 (2009), pp. 1007–21. [RI43] E. Garnaud, S. Maabout, and M. Mosbah, Functional dependencies are helpful for partial materialization of data cubes, Annals of Mathematics and Artificial Intelligence, (2013), pp. 1–30. [RI44] A. Ghozlane, F. Bringaud, H. Soueidan, I. Dutour, F. Jourdan, and P. Thebault, Flux analysis of the trypanosoma brucei glycolysis based on a multi-objective criteria bioinformatic approach, advances in bioinfromatics, 2012, in press. international conference with published acts, Advances in Bioinformatics, 2012 (2012), pp. 16 pages, Article ID 159423. [RI45] F. Gilbert, P. Simonetto, F. Zaidi, F. Jourdan, and R. Bourqui, Communities and hierarchical structures in dynamic social networks: analysis and visualization, Social Network Analysis and Mining, 1 (2011), pp. 85–95. [RI46] D. E. Gloriam, S. Orchard, D. Bertinetti, E. Björling, E. Bongcam-Rudloff, C. A. K. Borrebaeck, J. Bourbeillon, A. R. M. Bradbury, A. De Daruvar, S. Dübel, R. Frank, T. J. Gibson, L. Gold, N. Haslam, F. W. Herberg, T. Hiltke, J. D. Hoheisel, S. Kerrien, M. Koegl, Z. Konthur, B. Korn, U. Landegren, L. Montecchi-Palazzi, S. Palcy, H. Rodriguez, S. Schweinsberg, V. Sievert, O. Stoevesandt, M. J. Taussig, M. Ueffing, M. Uhlén, S. Van Der Maarel, C. Wingren, P. Woollard, D. J. Sherman, and H. Hermjakob, A community standard format for the representation of protein affinity reagents., Mol Cell Proteomics, 9 (2010), pp. 1–10. [RI47] C. Godin and P. Ferraro, Quantifying the degree of self-nestedness of trees. application to the structural analysis of plants, IEEE TCBB, 7 (2010), pp. 688–703. [RI48] C. Godin and P. Ferraro, Quantifying the degree of self-nestedness of trees: application to the structural analysis of plants, IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), 7 (2010), pp. 688–703. [RI49] C. Herrbach, A. Denise, and S. Dulucq, Average complexity of the jiang-wang-zhang pairwise tree alignment algorithm and of a rna secondary structure alignment algorithm, Theoretical Computer Science, 411 (2010), pp. 2423–2432. [RI50] G. Jean and M. Nikolski, Sydig: uncovering synteny in distant genomes, Int. J. of Bioinformatics Research and Applications, (2011), pp. 43–62. [RI51] G. Jean, D. J. Sherman, and M. Nikolski, Mining the semantics of genome super-blocks to infer ancestral architectures, Journal of Computational Biology, 16 (2009), pp. 1267–1284. [RI52] G. Kunze, C. Gaillardin, M. Czernicka, P. Durrens, T. Martin, E. Böer, T. Gabaldón, J. Cruz, E. Talla, C. Marck, A. Goffeau, V. Barbe, P. Baret, K. Baronian, S. Beier, C. Bleykasten, R. Bode, S. Casaregola, L. Despons, C. Fairhead, M. Giersberg, P. Gierski, U. Hähnel, A. Hartmann, D. Jankowska, C. Jubin, P. Jung, I. Lafontaine, V. LehLouis, M. Lemaire, M. Marcet-Houben, M. Mascher, G. Morel, G.-F. Richard, J. Riechen, C. Sacerdot, A. Sarkar, G. Savel, J. Schacherer, D. Sherman, N. Stein, M.-L. Straub, A. Thierry, A. Trautwein-Schult, B. Vacherie, E. Westhof, S. Worch, B. Dujon, J.L. Souciet, P. Wincker, U. Scholz, and C. Neuvéglise, The complete genome of blastobotrys F.4. MABIOVIS 329 (arxula) adeninivorans ls3 - a yeast of biotechnological interest., Biotechnology for Biofuels, 7 (2014), p. 66. [RI53] A. Lambert, R. Bourqui, and D. Auber, Winding roads: Routing edges into bundles, Computer Graphics Forum, 29 (2010), pp. 853–862. [RI54] A. Lambert, J. Dubois, and R. Bourqui, Pathway preserving representation of metabolic networks, Computer Graphics Forum, 30 (2011), pp. 1021 – 1030. [RI55] C. Lemaitre, A. Barré, C. Citti, F. Tardy, F. Thiaucourt, P. Sirand-Pugnet, and P. Thébault, A novel substitution matrix fitted to the compositional bias in mollicutes improves the prediction of homologous relationships, BMC Bioinformatics, 12 (2011), p. 457. [RI56] N. Loira, T. Dulermo, J.-M. Nicaud, and D. Sherman, A genome-scale metabolic model of the lipid-accumulating yeast yarrowia lipolytica, BMC Systems Biology, 6 (2012), p. 35. [RI57] V. L. Louis, L. Despons, A. Friedrich, T. Martin, P. Durrens, S. Casarégola, C. Neuvéglise, C. Fairhead, C. Marck, J. A. Cruz, M.-L. Straub, V. Kugler, C. Sacerdot, Z. Uzunov, A. Thierry, S. Weiss, C. Bleykasten, J. De Montigny, N. Jacques, P. Jung, M. Lemaire, S. Mallet, G. Morel, G.-F. Richard, A. Sarkar, G. Savel, J. Schacherer, M.L. Seret, E. Talla, G. Samson, C. Jubin, J. Poulain, B. Vacherie, V. Barbe, E. Pelletier, D. J. Sherman, E. Westhof, J. Weissenbach, P. V. Baret, P. Wincker, C. Gaillardin, B. Dujon, and J.-L. Souciet, Pichia sorbitophila, an interspecies yeast hybrid, reveals early steps of genome resolution after polyploidization., G3 (Bethesda), 2 (2012), pp. 299–311. [RI58] A. Mancheron, R. Uricaru, and E. Rivals, An alternative approach to multiple genome comparison, Nucleic Acids Research, 39 (2011). [RI59] L. Manso-Silván, F. Tardy, E. Baranowski, A. Barré, A. Blanchard, M. Breton, C. Couture, C. Citti, E. Dordet-Frisoni, V. Dupuy, P. Gaurivaud, D. Jacob, C. Lemaitre, M. Nikolski, L.-X. Nouvel, F. Poumarat, P. Thébault, S. Theil, F. Thiaucourt, and P. Sirand-Pugnet, Draft genome sequences of mycoplasma alkalescens, mycoplasma arginini, and mycoplasma bovigenitalium, three species with equivocal pathogenic status for cattle, Genome Announcements, 1 (2013). [RI60] G. Melançon and C. Reutenauer, On a class of lyndon words extending christoffel words and related to a multidimensional continued fraction algorithm, Journal of Integer Sequences, 16 (2014), p. 13.19.17. [RI61] M. Nikolski, D. Alonso-Alemany, A. Barré, S. Beretta, P. Bonizzoni, and G. Valiente, Further steps in tango: improved taxonomic assignment in metagenomics, Bioinformatics, (2013), p. 10.1093/bioinformatics/btt256. [RI62] C. Ordonez, S. Maabout, D. S. Matusevich, and W. Cabrera, Extending er models to capture database transformations to build data sets for data mining, Data and Knowledge Engineering, 89 (2013), pp. 38–54. [RI63] A. Ouangraoua and P. Ferraro, A constrained edit distance algorithm between semi-ordered trees, Theoretical Computer Science, 410 (2009), pp. 837–846. [RI64] A. Ouangraoua and P. Ferraro, A new constrained edit distance between quotiented ordered trees, Journal of Discrete Algorithms, 7 (2009), pp. 78–89. [RI65] C. Payen, G. Fischer, C. Marck, C. Proux, D. J. Sherman, J.-Y. Coppée, M. Johnston, B. Dujon, and C. Neuvéglise, Unusual composition of a yeast chromosome arm is associated with its delayed replication., Genome Researchearch, (2009). 330 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI66] S. Pereyre, P. Sirand-Pugnet, L. Beven, A. Charron, H. Renaudin, A. Barré, P. Avenaud, D. Jacob, A. Couloux, V. Barbe, A. De Daruvar, A. Blanchard, and C. Bébéar, Life on arginine for mycoplasma hominis: clues from its minimal genome and comparison with other human urogenital mycoplasmas., PLoS Genetics, 5 (2009). [RI67] B. Pinaud, G. Melançon, and J. Dubois, Porgy: A visual graph rewriting environment for complex systems, Computer Graphics Forum, 31 (2012), pp. 1265–1274. [RI68] F. Queyroi, Optimizing a hierarchical community structure of a complex network, Advances in Knowledge Discovery and Management, 4 (2014), pp. 3–14. [RI69] F. Queyroi, M. Delest, J.-M. Fédou, and G. Melançon, Assessing the quality of multilevel graph clustering, Data Mining and Knowledge Discovery, 28 (2014), pp. 1107–1128. [RI70] E. Rivals, A. Mancheron, and R. Uricaru, Reliable bacterial genome comparison tools, ERCIM News, 82 (2010), pp. 017–018. [RI71] A. Romano, H. Trip, H. Campbell-Sills, O. Bouchez, D. Sherman, J. S. Lolkema, and P. M. Lucas, Genome sequence of lactobacillus saerimneri 30a (formerly lactobacillus sp. strain 30a), a reference lactic acid bacterium strain producing biogenic amines., Genome Announcements, 1 (2013). [RI72] G. Sacomoto, J. Kielbassa, R. Chikhi, R. Uricaru, P. Antoniou, M.-F. Sagot, P. Peterlongo, and V. Lacroix, Kissplice: de-novo calling alternative splicing events from rna-seq data, BMC Bioinformatics, 13 (2012). [RI73] A. Sallaberry, F. Zaidi, and G. Melançon, Model for generating artificial social networks having community structures with small world and scale free properties, Social Network Analysis and Mining, 3 (2013). [RI74] S.-A. Sansone, P. Rocca-Serra, D. Field, E. Maguire, C. Taylor, O. Hofmann, H. Fang, S. Neumann, W. Tong, L. Amaral-Zettler, K. Begley, T. Booth, L. Bougueleret, G. Burns, B. Chapman, T. Clark, L.-A. Coleman, J. Copeland, S. Das, A. De Daruvar, P. De Matos, I. Dix, S. Edmunds, C. T. Evelo, M. J. Forster, P. Gaudet, J. Gilbert, C. Goble, J. L. Griffin, D. Jacob, J. Kleinjans, L. Harland, K. Haug, H. Hermjakob, S. J. Ho Sui, A. Laederach, S. Liang, S. Marshall, A. Mcgrath, E. Merrill, D. Reilly, M. Roux, C. E. Shamu, C. A. Shang, C. Steinbeck, A. Trefethen, B. Williams-Jones, K. Wolstencroft, I. Xenarios, and W. Hide, Toward interoperable bioscience data., Nature Genetics, 44 (2012), pp. 121–6. [RI75] A. Sarkar, M. Nikolski, and P. Durrens, The family based variability in protein family expansion., International Journal of Bioinformatics Research and Applications, 9 (2013), pp. 121–33. [RI76] A. Sarkar, H. Soueidan, and M. Nikolski, Identification of conserved gene clusters in multiple genomes based on synteny and homology, BMC Bioinformatics, 12 (2011). [RI77] D. J. Sherman, Minimum information requirements : neither bandits in the attic nor bats in the belfry, New Biotechnology, 25 (2009), pp. 173–4. [RI78] D. J. Sherman, T. Martin, M. Nikolski, C. Cayla, J.-L. Souciet, and P. Durrens, Genolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes., Nucleic Acids Research, (2009). [RI79] P. Simonetto, D. Archambault, D. Auber, and R. Bourqui, Impred: An improved forcedirected algorithm that prevents nodes from crossing edges, Computer Graphics Forum, 30 (2011). [RI80] P. Simonetto, D. Auber, and D. Archambault, Fully automatic visualisation of overlapping sets, Computer Graphics Forum, 28 (2009), pp. 967–974. BIBLIOGRAPHY 331 [RI81] J.-L. Souciet, B. Dujon, C. Gaillardin, M. Johnston, P. V. Baret, P. Cliften, D. J. Sherman, J. Weissenbach, E. Westhof, P. Wincker, C. Jubin, J. Poulain, V. Barbe, B. Ségurens, F. Artiguenave, V. Anthouard, B. Vacherie, M.-E. Val, R. S. Fulton, P. Minx, R. Wilson, P. Durrens, G. Jean, C. Marck, T. Martin, M. Nikolski, T. Rolland, M.-L. Seret, S. Casaregola, L. Despons, C. Fairhead, G. Fischer, I. Lafontaine, V. Leh, M. Lemaire, J. De Montigny, C. Neuveglise, A. Thierry, I. Blanc-Lenfle, C. Bleykasten, J. Diffels, E. Fritsch, L. Frangeul, A. Goeffon, N. Jauniaux, R. Kachouri-Lafond, C. Payen, S. Potier, L. Pribylova, C. Ozanne, G.-F. Richard, C. Sacerdot, M.-L. Straub, and E. Talla, Comparative genomics of protoploid saccharomycetaceae., Genome Research, 19 (2009), pp. 1696–1709. [RI82] H. Soueidan, F. Maurier, A. Groppi, P. Sirand-Pugnet, F. Tardy, C. Citti, V. Dupuy, and M. Nikolski, Finishing bacterial genome assemblies with mix, BMC Bioinformatics, (2013). [RI83] F. Tardy, E. Baranowski, X. Nouvel, V. Mick, L. Manso-Silvan, F. Thiaucourt, P. Thébault, M. Breton, P. Sirand-Pugnet, A. Blanchard, A. Garnier, P. Gibert, Y. Game, F. Poumarat, and C. Citti, Emergence of atypical mycoplasma agalactiae strains harboring a new prophage and associated with an alpine wild ungulate mortality episode, Applied and Environmental Microbiology, 78 (2012), pp. 4659–4668. [RI84] S. Ueno, G. Le Provost, V. Léger, C. Klopp, C. Noirot, J.-M. Frigerio, F. Salin, J. Salse, M. Abrouk, F. Murat, O. Brendel, J. Derory, P. Abadie, P. Léger, C. Cabane, A. Barré, A. De Daruvar, A. Couloux, P. Wincker, M.-P. Reviron, A. Kremer, and C. Plomion, Bioinformatic analysis of ests collected by sanger and pyrosequencing methods for a keystone forest tree species: oak., BMC Genomics, 11 (2010), p. 650. [RI85] R. Uricaru, A. Mancheron, and E. Rivals, Novel definition and algorithm for chaining fragments with proportional overlaps, Journal of Computational Biology, 18 (2011), pp. 1141–1154. [RI86] D. Waltemath, R. Adams, D. A. Beard, F. T. Bergmann, U. S. Bhalla, R. Britten, V. Chelliah, M. T. Cooling, J. Cooper, E. J. Crampin, A. Garny, S. Hoops, M. Hucka, P. Hunter, E. Klipp, C. Laibe, A. K. Miller, I. Moraru, D. Nickerson, P. Nielsen, M. Nikolski, S. Sahle, H. M. Sauro, H. Schmidt, J. L. Snoep, D. Tolle, O. Wolkenhauer, and N. Le Novère, Minimum information about a simulation experiment (miase), PLoS Computational Biology, 7 (2011). [RI87] F. Zaidi, P. Simonetto, R. Bourqui, F. Gilbert, and F. Jourdan, Communities and hierarchical structures in dynamic social networks: analysis and visualization, Social Network Analysis and Mining, 1 (2011), pp. 83–95. [RI88] A. Zhukova, R. Adams, C. Laibe, and N. Le Novère, Libkisao: a java library for querying kisao, BMC Research Notes, 5 (2012), p. 520. [RI89] A. Zhukova and D. J. Sherman, Knowledge-based generalization of metabolic models, Journal of Computational Biology, (2014). [RI90] A. Zhukova and D. J. Sherman, Knowledge-based generalization of metabolic networks: a practical study, Journal of Bioinformatics and Computational Biology, 12(2) (2014). [RI91] A. Zimmer, C. Durand, N. Loira, P. Durrens, D. J. Sherman, and P. Marullo, Qtl dissection of lag phase in wine fermentation reveals a new translocation responsible for saccharomyces cerevisiae adaptation to sulfite., PLoS ONE, 9 (2014). Peer-reviewed journals (national) [RN1] R. Bourqui, P. Simonetto, and F. Jourdan, Un algorithme stable de décomposition pour l’analyse des réseaux sociaux dynamiques, REVUE DES NOUVELLES TECHNOLOGIES DE L’INFORMATION, (2009), pp. 337–348. 332 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Chapters in contributed volumes (international) [CHI1] J. Allali, P. Ferraro, P. Hanna, and M. Robine, Polyphonic alignment algorithms for symbolic music retrieval, in Auditory Display, S. Ystad, M. Aramaki, R. Kronland-Martinet, and K. Jensen, eds., Springer Verlag Berlin, 2010, pp. 466–482. [CHI2] A. Ben Zakour, S. Maabout, M. Mosbah, and M. Sistiaga, Relaxing time granularity for mining frequent sequences, in Advances in Knowledge Discovery and Management, F. G. B. P. . G. V. . D. A. Zighed, ed., Springer International Publishing, 2014, pp. 53–76. [CHI3] G. Blin, M. Crochemore, and S. Vialette, Algorithmic aspects of arc-annotated sequences, in Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications, Z. A. Y. Elloumi Mourad, ed., Wiley, 2011, pp. 113–126. [CHI4] R. Bourqui, P. Simonetto, and F. Jourdan, A stable decomposition algorithm for dynamical social network analysis, in Advances in Knowledge Discovery and Management, D. A. Z. Fabrice Guillet, Gilbert Ritschard and H. Briand, eds., Springer, 2010, pp. 167–178. [CHI5] P. Ferraro, M. Robine, J. Allali, P. Hanna, and R. Thomas, Detection of near-duplicate musical documents from a multi-level comparison of tonal information, in Information Extraction from the Internet, iconcept press, 2011, pp. 129–143. [CHI6] A. Lambert, R. Bourqui, and D. Auber, Graph visualization for geography, in Methods for Multilevel Analysis and Visualisation of Geographical Networks, Springer, 2013, pp. 81–102. [CHI7] G. Melançon and C. Rozenblat, Structural analysis of networks, in Methods for Multilevel Analysis and Visualisation of Geographical Networks, Springer, 2013, pp. 69–80. [CHI8] C. Rozenblat and G. Melançon, A small world perspective on urban systems, in Handbook of Theoretical and Quantitative Geography, C. M. François Bavaud, ed., Université de Lausanne, Faculté des Géosciences et de l’Environnement, 2009, pp. 431–457. [CHI9] C. Rozenblat and G. Melançon, A small world perspective on urban systems, in Methods for Multilevel Analysis and Visualisation of Geographical Networks, Springer, 2013, pp. 19–32. [CHI10] C. Rozenblat, G. Melançon, R. Bourqui, and D. Auber, Comparing multilevel clustering methods on weighted graphs: The case of worldwide air passenger traffic 2000-2004, in Methods for Multilevel Analysis and Visualisation of Geographical Networks, Springer, 2013, pp. 141–154. Chapters in contributed volumes (national) [CHN1] P. Durrens, Phylogénie moléculaire des champignons, in Mycologie médicale, C. Ripert, ed., Lavoisier, 2013, pp. 49–54. [CHN2] G. Melançon and C. Douy, La visualisation d’information au service de la veille concurrentielle, de la fouille d’information et de la supervision de systèmes complexes, in La sécurité globale : Réalité, enjeux et perspectives, W. Akmouche, ed., SEE (Société des électriciens et des électroniciens), CNRS Editions, 2009, pp. 263–271. Editors of contributed volumes (international) [DI1] A. Cuzzocrea and S. Maabout, Proceedings of the third MEDI international conference, Springer, 2013. [DI2] F. Guillet, B. Pinaud, G. Venturini, and A. D. Zighed, Advances in Knowledge Discovery and Management Volume 4, vol. 527, Springer, 2014. [DI3] F. Guillet, B. Pinaud, G. Venturini, and D. A. Zighed, Advances in Knowledge Discovery and Management. Studies in Computational Intelligence - volume 3 - Vol. 471, Springer, 2013. BIBLIOGRAPHY 333 [DI4] G. Melançon, T. Munzner, and D. Weiskopf, Computer Graphics Forum (Proceedings Eurographics/IEEE Symposium on Visualization), Wiley, 2010. [DI5] C. Rozenblat and G. Melançon, Methods for Multilevel Analysis and Visualisation of Geographical Networks, Springer, 2013. Editors of contributed volumes (national) [DN1] Y. Lechevallier, G. Melançon, and B. Pinaud, Extraction et Gestion des Connaissances, EGC2012, vol. RNTI-E-23, Hermann, 2012. [DN2] S. Maabout, Numéro spécial de la revue RNTI (Revue des Nouvelles Technologies de l’Information), Hermann, 2012. Invited conference talks (international) [II1] G. Blin, Mistreat: Motion simulator in proton-therapy treatment, in The Workshop on Bioinformatics and Stringology 2014 (BioS 2014), 2014. [II2] P. Durrens, The génolevures database, in 10th anniversary of Génolevures, P. B. Dujon, ed., 2010. [II3] M. Fernandez, H. Kirchner, I. Mackie, and B. Pinaud, Visual modelling of complex systems: Towards an abstract machine for porgy, in Lecture Notes in Computer Science, vol. 8493, Springer, 2014. [II4] P. Lucas, E. Bon, V. Renouf, M. Dols-Lafargue, C. Le Marrec, and A. Lonvaud-Funel, Oenococcus oeni genomic adaptation to the wine environment, in SGM-Society for General Microbiology Autumn 2009 Meeting, 2009. [II5] D. J. Sherman, Methods for understanding function and history in small eukaryote genomes, in Colloquium LIX, M. Régnier, ed., inria, 2010. [II6] D. J. Sherman, Taming the complexity of ’n-ary’ relations in comparative genomics, in 9th International Conference on Genome Biology and Bioinformatics, M. Borodovsky, ed., 2013. [II7] D. J. Sherman and N. Golenetskaya, Addressing scaling-out challenges for comparative genomics, in Moscow Conference on Computational Molecular Biology, 2011. [II8] D. J. Sherman, N. Loira, and N. Golenetskaya, High-performance comparative annotation, in Bioinformatics after next-generation sequencing, V. Makeev and G. Kucherov, eds., inria, 2010. [II9] P. Thebault, A multi-objective heuristic integrating biological data for flux analysis in metabolic networks, in Open Source Software for Systems, Pathways, Interactions and Networks (SPIN-OSS) retreat being held at the Wellcome Trust Genome Campus, EBI, 2012. Invited conference talks (national) [IN1] R. Assar, H. Soueidan, and D. J. Sherman, Hierarchical study of guyton circulatory model, in Les Journées Ouvertes en Biologie, Informatique et Mathématiques JOBIM 2009, I. R. Eric Rivals, ed., Eric Rivals, Irena Rusu, 2009. [IN2] D. J. Sherman, Two examples of evolutionary algorithms in reconstructing genome evolution, in Workshop on Evolutionary Algorithms - Challenges in Theory and Practice, inria, 2010. Conferences with published proceedings (international) [CI1] J. Abello and F. Queyroi, Fixed points of graph peeling, in 2013 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2013. 334 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI2] A. Adamaszek, G. Blin, and A. Popa, Approximation and hardness results for the maximum edges in transitive closure problem, in 25th International Workshop on Combinatorial Algorithms, 2014, p. 10 pp. [CI3] J. Allali, P. Antoniou, P. Ferraro, C. Iliopoulos, and S. Michalakopoulos, Overlay problems for music and combinatorics, in Proceedings of the 15th International Conference on Auditory Display, M. Aramaki, R. Kronland-Martinet, S. Ystad, and K. Jensen, eds., 2009, pp. 138–143. [CI4] J. Allali, P. Antoniou, P. Ferraro, C. Iliopoulos, and S. Michalakopoulos, Combinatorial detection of arrhytmia, in BIOSIGNALS 2010, 2010, pp. 180–187. [CI5] J. Allali, C. Chauve, P. Ferraro, and A.-L. Gaillard, Efficient chaining of seeds in ordered trees, in Proceeedings of the 21st International Workshop on Combinatorial Algorithms, 2010. [CI6] O. Andrei, M. Fernandez, H. Kirchner, G. Melançon, O. Namet, and B. Pinaud, Porgy: Strategy-driven interactive transformation of graphs, in 6th International Workshop on Computing with Terms and Graphs (TERMGRAPH 2011), R. Echahed, ed., vol. 48, 2011, pp. 54–68. [CI7] P. Antoniou, J. Allali, C. Iliopoulos, and P. Ferraro, Validation and decomposition of partially occluded images with holes, in Proceedings of the Prague Strincology Conference, 2009, pp. 129– 136. [CI8] D. Archambault, T. Munzner, and D. Auber, Tuggraph: Path-preserving hierarchies for browsing proximity and paths in graphs, in IEEE Pacific Visualization Symposium, 2009, pp. 113–121. [CI9] D. Archambault, H. Purchase, and B. Pinaud, The readability of path-preserving clusterings of graphs, in Eurovis 2010, 12th annual Eurographics/IEEE Symposium on Visualization, G. Melançon, T. Munzner, and D. Weiskopf, eds., vol. 29(3) of Eurographics/ IEEE-VGTC Symposium on Visualization 2010, WILEY, 2010, pp. 1173–1182. [CI10] D. Archambault, H. Purchase, and B. Pinaud, Difference map readability for dynamic graphs, in 18th International Symposium on Graph Drawing, U. Brandes and S. Cornelsen, eds., vol. 6502 of LNCS, Springer, 2011, pp. 50–61. [CI11] R. Assar, M. A. Montecino, and D. J. Sherman, Stochastic modeling of complex systems and systems biology: From stochastic transition systems to hybrid systems, in XII Latin American Congress of Probability and Mathematical Statistics, 2012. [CI12] R. Assar, F. Vargas, and D. J. Sherman, Reconciling competing models: a case study of wine fermentation kinetics, in Algebraic and Numeric Biology 2010, K. Horimoto, M. Nakatsui, and N. Popov, eds., vol. 6479 of Lecture Notes in Computer Science, Springer, 2012, pp. 68–83. [CI13] A. Benzakour, S. Maabout, M. Mosbah, and M. Sistiaga, Time constraints extension on frequent sequential patterns, in Proceedings of KDIR conference, SciTePress, ed., 2010, pp. 281–287. [CI14] A. Benzakour, S. Maabout, M. Mosbah, and M. Sistiaga, Uncertainty interval temporal sequences extraction, in Proceedings of the 6th Int. Conf. on Information Systems, Technology and Management (ICISTM), no. 285 in Com. Comp. Info. Science (CCIS), Springer, 2012, pp. 259–270. [CI15] G. Blin, P. Bonizzoni, R. Dondi, R. Rizzi, and F. Sikora, Complexity insights of the minimum duplication problem, in 38th International Conference on Current Trends in Theory and Practice of Computer Science (SOFSEM 2012), Springer, ed., vol. 7147 of Lecture Notes in Computer Science, 2012, pp. 153–164. [CI16] G. Blin, L. Bulteau, M. Jiang, P. J. Tejada, and S. Vialette, Hardness of longest common subsequence for sequences with bounded run-lengths, in 23rd Annual Symposium on Combinatorial Pattern Matching (CPM’12), J. Kärkkäinen and J. Stoye, eds., vol. 7354 of Lecture Notes in Computer Science, Springer-Verlag, 2012, pp. 138–148. F.4. MABIOVIS 335 [CI17] G. Blin, G. Fertin, H. Mohamed-Babou, I. Rusu, F. Sikora, and S. Vialette, Algorithmic aspects of heterogeneous biological networks comparison, in Proceedings of the 5th International Conference on Combinatorial Optimization and Applications, vol. 6831 of Lecture Notes in Computer Science, Springer, 2011, pp. 272–286. [CI18] G. Blin, G. Fertin, F. Sikora, and S. Vialette, The exemplar breakpoint distance for non-trivial genomes cannot be approximated, in Proceedings of the 3rd Workshop on Algorithms and Computation, D. S. and U. R, eds., vol. 5431 of Lecture Notes in Computer Science, Springer-Verlag, 2009, pp. 357–368. [CI19] G. Blin, S. Hamel, and S. Vialette, Comparing rna structures with biologically relevant operations cannot be done without strong combinatorial restrictions, in 4th Workshop on Algorithms and Computation (WALCOM’10), R. M. S. and F. S., eds., vol. 5942 of Lecture Notes in Computer Science, Springer-Verlag, 2010, pp. 149–160. [CI20] G. Blin, M. Jiang, and S. Vialette, The longest common subsequence problem with crossingfree arc-annotated sequences, in 19th edition of the International Symposium on String Processing and Information Retrieval (SPIRE 2012), L. C.-B. et al., ed., vol. 7608 of LNCS, Springer, Heidelberg, 2012. [CI21] G. Blin, P. Morel, R. Rizzi, and S. Vialette, Towards unlocking the full potential of multileaf collimators, in 40th International Conference on Current Trends in Theory and Practice of Computer Science (SOFSEM), Lecture Notes in Computer Science, 2014, p. 13 pp. [CI22] G. Blin, R. Rizzi, F. Sikora, and S. Vialette, Minimum mosaic inference of a set of recombinants, in 17th Computing: the Australasian Theory Symposium (CATS’11), P. Alex and V. Taso, eds., vol. 119 of CRPIT, ACS, 2011, pp. 23–30. [CI23] G. Blin, R. Rizzi, and S. Vialette, A faster algorithm for finding minimum tucker submatrices, in 6th Computability in Europe (CiE’10), vol. 6158 of Lecture Notes in Computer Science, Springer, 2010, pp. 69–77. [CI24] G. Blin, R. Rizzi, and S. Vialette, A polynomial-time algorithm for finding minimal conflicting sets, in 6th International Computer Science Symposium in Russia (CSR’11), vol. 6651 of Lecture Notes in Computer Science, 2011, pp. 373–384. [CI25] G. Blin, F. Sikora, and S. Vialette, Querying protein-protein interaction networks, in 5th International Symposium on Bioinformatics Research and Applications (ISBRA’09), M. Ion, N. Giri, and Z. Yanqing, eds., vol. 5542 of LNBI, Springer-Verlag, 2009, pp. 52–62. [CI26] G. Blin, F. Sikora, and S. Vialette, Gramofone: a cytoscape plugin for querying motifs without topology in protein-protein interactions networks, in 2nd International Conference on Bioinformatics and Computational Biology (BICoB’10), H. Al-Mubaid, ed., International Society for Computers and their Applications (ISCA), 2010, p. 38–43. [CI27] G. Blin and J. Stoye, Finding nested common intervals efficiently, in 7th RECOMB Satellite Workshop on Comparative Genomics (RECOMB-CG’09), C. F. D. and M. István, eds., vol. 5817 of Lecture Notes in Bioinformatics, Springer-Verlag, 2009, pp. 59–69. [CI28] L. Bourgeade, C. Chauve, and J. Allali, Chaining sequence/structure seeds for computing rna similarity, in Lecture Notes in Bioinformatics (LNBI), 2014. [CI29] L. Bourgeade, T. Martin, and E. Bon, Pseudoe: A computational method to detect psi-genes and explore pseudome dynamics in wine bacteria from the oenococcus genus., in Proccedings of JOBIM 2012- 13ème Journées Ouvertes en Biologie, Informatique et Mathématiques, D. T. François Cost, ed., SFBI, INRIA, 2012, pp. 435–436. [CI30] R. Bourqui and D. Auber, Large quasi-tree drawing: A neighborhood based approach, in Proc. of the 13th International Conference on Information Visualisation, 2009, pp. 653–660. 336 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI31] R. Bourqui, F. Gilbert, P. Simonetto, F. Zaidi, U. Sharan, and F. Jourdan, Detecting structural changes and command hierarchies in dynamic social networks, in Proc. of the 2009 Int. Conf. on Advances in Social Network Analysis and Data Mining, 2009, pp. 83–88. [CI32] R. Bourqui, H. Purchase, and F. Jourdan, Domain specific vs generic network visualization: an evaluation with metabolic networks, in Proceedings of the twelfth Australasian Conference on User Interface, 2011, pp. 9–18. [CI33] R. Bourqui and M. Westenberg, Visualizing temporal dynamics at the genomic and metabolic level, in Proc. of the 13th International Conference on Information Visualisation, 2009, pp. 317–322. [CI34] F. Boudon, C. Preuksakarn, P. Ferraro, J. Diener, E. Nikinmaa, and C. Godin, Quantitative assessment of automatic reconstructions of branching systems, in 7th International Conference on Functional-Structural Plant Models, R. Sievänen, E. Nikinmaa, C. Godin, A. Lintunen, and P. Nygren, eds., 2013, pp. 64–66. [CI35] I. Chahid, S. Maabout, L. Martin, and M. Mosbah, Simplification de données de vol pour un stockage optimal et une visualisation accélérée, in Actes de la 10ème Conférence Internationale Francophone sur l’Extraction et la Gestion de Connaissance, RNTI (Revue des Nouvelles Technologies de l’Information), Cepadeues, 2010, pp. 393–398. [CI36] O. Curé, G. Blin, D. Revuz, and D. C. Faye, Waterfowl: a compact, self-indexed and inferenceenabled rdf store, in 11th European Semantic Web Conference (ESWC’14), LNCS, ed., 2014, p. 15 pp. [CI37] O. Curé, D. C. Faye, and G. Blin, Towards a better insight of rdf triples ontology-guided storage system abilities, in 6th International Workshop on Scalable Semantic Web Knowledge Base Systems (SSWS’10), 2010, p. 10pp. [CI38] J. Dubois, L. Cottret, A. Ghozlane, D. Auber, F. Bringaud, P. Thebault, F. Jourdan, and R. Bourqui, Systrip: a visual environment for the investigation of time-series data in the context of metabolic networks, in Proceedings of the 16th International Conference on Information Visualization (IV’12), 2012, p. 4771a204. [CI39] J. Dubois, A. Ghozlane, P. Thebault, I. Dutour, and R. Bourqui, Genome-wide detection of srna targets with rnav, in Proceedings of the 3rd Symposium on Biological Data Visualization, 2013, pp. 81 – 88. [CI40] F. El Gharniti, C. Miot-Sertier, M. Dols-Lafargue, E. Bon, A. Lonvaud-Funel, and C. Le Marrec-Le Henaff, Les is30 contribuent à la diversité génétique chez les oenococcus oeni., in 17ème Colloque International du Club des Bactéries Lactiques, 2010. [CI41] C. Fairhead, T. Gabaldón, T. Martin, P. Durrens, O. Lespinet, C. Hennequin, M. Bolotin-Fukuhara, and P. Wincker, Comparative genomics of the nakaseomyces clade: Candida glabrata and enew merging pathogens, in Comparative Genomics of Eukaryotic Microorganisms„ 2011. [CI42] D. Faye, O. Curé, G. Blin, and C. Thiam, Rdf triples management in rostore, in Actes de IC2011, 2012, pp. 755–770. [CI43] P. Ferraro, J. Allali, P. Hanna, and M. Robine, Extending alignment algorithm for polyphonic comparison, in Proceedings of the International Computer Music Modeling and Retrieval Conference, 2009, pp. 206–209. [CI44] P. Ferraro, P. Hanna, L. Imbert, and T. Izard, Accelerating query-by-humming on gpu, in Proceedings of the 10th International Society for Music Information Retrieval Conference, 2009. [CI45] P. Ferraro, P. Hanna, L. Imbert, and T. Izard, Accelerating query-by-humming on gpu, in 10th International Society for Music Information Retrieval Conference, 2009, pp. 279–284. F.4. MABIOVIS 337 [CI46] M. Fernandez, H. Kirchner, and B. Pinaud, Strategic port graph rewriting: An interactive modelling and analysis framework, in Electronic Proceedings in Theoretical Computer Science (EPTCS), A. L. L. Dragan Bošnački, Stefan Edelkamp and A. Wijs, eds., vol. 159, 2014, pp. 15–29. [CI47] E. Garnaud, N. Hanusse, S. Maabout, and N. Novelli, Parallel mining of dependencies, in Proceedings of The 2014 International Conference on High Performance Computing & Simulation (HPCS 2014), IEEE, 2014, pp. 1–8. [CI48] E. Garnaud, S. Maabout, and M. Mosbah, Using functional dependencies for reducing the size of a data cube, in Proccedings of the 7th International Symposium on Foundations of Information and Knowledge Systems (FOIKS), Springer, ed., LNCS 7153, 2012, pp. 145–164. [CI49] A.-L. Gaillard, P. Ferraro, F. Boudon, and C. Godin, Lossy compression of plant architectures, in Proceedings of the 6th International Workshop on Functional-Structural Plant Models, 2010, pp. 10–13. [CI50] A.-L. Gaillard, P. Ferraro, F. Boudon, and C. Godin, Lossy compression of tree architectures, in 6th International Workshop on Functional-Structural Plant Models, T. DeJong and D. Da Silva, eds., 2010, pp. 12–15. [CI51] R. Giot and R. Cherrier, Predicting bikeshare system usage up to one day ahead, in IEEE Symposium Series in Computational Intelligence 2014 (SSCI 2014). Workshop on Computational Intelligence in Vehicles and Transportation Systems (CIVTS 2014), 2014, pp. 1–8. [CI52] F. Gilbert and D. Auber, From databases to graph visualization, in Information Visualization, 2010, p. 128. [CI53] F. Gilbert and D. Auber, Import automatique et interactif de données dans les systèmes de visualisations, in 11ème Conférence Internationale Francophone sur l’Extraction et la Gestion des Connaissances EGC 2011, 2011. [CI54] A. Gouliemakis, J. Bridier, A. Barré, O. Claisse, D. Sherman, P. Durrens, A. LonvaudFunel, and E. Bon, How does oenococcus oeni adapt to its environment? a pangenomic oligonucleotide microarray for analysis o. oeni gene expression under wine shock., in oeno2011, Actes de Colloques du 9ème symposium international d’oenologie de Bordeaux, P. L. A. L. G. d. R. P. T. Univ. Bordeaux Segalen (P. Darriet, L. Geny, ed., Dunod, Paris, 2012, pp. 358–363. [CI55] N. Hanusse and S. Maabout, Un algorithme parallèle pour l’extraction des bordures, in BDA’10, 2010, p. 11 pages. [CI56] N. Hanusse and S. Maabout, A parallel algorithm for computing borders, in Proceedings of the 20th Int. Conf. On Information and Knowledge Management, ACM, 2011, pp. 1639–1648. [CI57] N. Hanusse, S. Maabout, and R. Tofan, Algorithme distribué pour l’extraction des fréquents maximaux, in Algotel, A. Chaintreau and C. Magnien, eds., 2009. [CI58] N. Hanusse, S. Maabout, and R. Tofan, Matérialisation partielle des cubes de données, in Actes des 25èmes journées "Bases de Données Avancées" BDA’09, 2009, pp. 1–20. [CI59] N. Hanusse, S. Maabout, and R. Tofan, A view selection algorithm with performance guarantee, in International Conference on Extending Database Technology, 2009. [CI60] N. Hanusse, S. Maabout, and R. Tofan, Revisiting the partial data cube materialization, in Proceedings of the 15th conference on Advances in Data Bases and Information Systems, no. 6909 in LNCS, Springer, 2011, pp. 70–83. [CI61] T. Hume, H. Soueidan, M. Nikolski, and G. Blin, Algorithmic progress on the cross-species conserved active modules detection problem, in 41st International Conference on Current Trends in Theory and Practice of Computer Science, 2015, p. 12pp. 338 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI62] P.-Y. Koenig, F. Zaidi, and D. Archambault, Interactive searching and visualization of patterns in attributed graphs., in Proceedings of Graphics Interface, 2010, pp. 113–120. [CI63] A. Lambert, D. Auber, and G. Mélançon, Living flows: enhanced exploration of edge-bundled graphs based on gpu-intensive edge rendering, in Proceedings of the 14th International Conference on Information Visualization (IV’10), 2010, pp. 523–530. [CI64] A. Lambert, R. Bourqui, and D. Auber, 3d edge bundling for geographical data visualization, in Proceedings of the 14th International Conference on Information Visualization (IV’10), 2010, pp. 329– 335. [CI65] A. Lambert, F. Queyroi, and R. Bourqui, Visualizing patterns in node-link diagrams, in Proceedings of the 16th International Conference on Information Visualisation (IV’12), 2012, pp. 48–53. [CI66] B. Martin, D. Brown, P. Hanna, and P. Ferraro, Blast for audio sequences alignment: a fast scalable cover identification, in Proceedings of the 13th International Society for Music Information Retrieval Conference, 2012. [CI67] B. Martin, P. Hanna, M. Robine, and P. Ferraro, Indexing musical pieces using their major repetition, in ACM/IEEE Joint Conference on Digital Libraries, 2011, pp. 153–156. [CI68] B. Martin, P. Hanna, M. Robine, and P. Ferraro, Towards an indexing method to speed-up music retrieval, in ACM SIGIR 2011 conference, 2011, pp. 1167–1168. [CI69] B. Martin, P. Hanna, V.-T. Ta, M. Desainte-Catherine, and P. Ferraro, Exemplar-based imputation of large missing audio parts using string matching on tonal features, in 12th International Society for Music Information Retrieval Conference, 2011, pp. 507–512. [CI70] T. Martin and P. Durrens, Génolevures : Policy for automated annotation of genome sequences, in Levures, Modèles et Outils IX, 2010. [CI71] T. Martin and P. Durrens, Génolevures: Policy for automated annotation of genome sequences, in JOBIM 2011, 2011. [CI72] T. Martin and P. Durrens, Feedback in the management of genomic data in the gdr génolevures, in ICY2012 13th International Congress on Yeasts, 2012. [CI73] T. Martin, M. Nikolski, D. J. Sherman, J.-L. Souciet, and P. Durrens, The génolevures online database, in Second German/ French/European/ Meeting Yeast and Filamentous Fungi, 2009. [CI74] T. Martin, D. J. Sherman, M. Nikolski, J.-L. Souciet, and P. Durrens, The génolevures website comparative genomic studies on hemiascomycetous yeasts, in Comparative Genomics of Eukaryotic Microorganisms 2009, 2009. [CI75] K. Musumbu, M. Diouf, and S. Maabout, Business rules generation methods by merging model driven architecture and web semantics, in Proceedings of 2010 IEEE International Conference On Software Engineering and Service Sciences, L. Wenzheng, ed., vol. IEEE of IEEE, IEEE, 2010, pp. 33–36. [CI76] M. Nadal and G. Melançon, One graph, multiple drawings, in 2013 17th International Conference Information Visualisation (IV), 2013, pp. 416 – 421. [CI77] B. Pinaud and P. Kuntz, Gvsr: an on-line guide for choosing a graph visualization software, in 18th International Symposium on Graph Drawing, U. Brandes and S. Cornelsen, eds., vol. 6502 of LNCS, Springer, 2011, pp. 400–401. [CI78] C. Preuksakarn, F. Boudon, P. Ferraro, J.-B. Durand, E. Nikinmaa, and C. Godin, Reconstructing plant architecture from 3d laser scanner data, in Proceedings of the 6th International Workshop on Functional-Structural Plant Models, 2010, pp. 12–17. F.4. MABIOVIS 339 [CI79] B. Renoust, G. Melançon, and M.-L. Viaud, Assessing group cohesion in homophily networks, in Proceedings of the 2013 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2013, pp. 149–155. [CI80] B. Renoust, G. Melançon, and M.-L. Viaud, Measuring group cohesion in document collections, in Web Intelligence (WI) and Intelligent Agent Technologies (IAT), 2013 IEEE/WIC/ACM International Joint Conferences on (Volume:1 ), 2013, pp. 373 – 380. [CI81] M. Robine, P. Hanna, T. Rocher, and P. Ferraro, Structured representation of harmony for music retrieval, in Proceedings of the International Computer Music Conference, 2009. [CI82] A. Sallaberry, F. Zaidi, C. Pich, and G. Melançon, Interactive visualization and navigation of web search results revealing community structures and bridges, in Proceedings of Graphics Interface, 2010, pp. 105–112. [CI83] A. Sarkar, M. Nikolski, and U. Maulik, Spectral clustering on neighborhood kernels with modified symmetry for remote homology detection, in EAIT ’11 Proceedings of the 2011 Second International Conference on Emerging Applications of Information Technology, 2011, pp. 269–272. [CI84] P. Simonetto and D. Auber, An heuristic for the construction of intersection graphs, in Information Visualization, 2009, pp. 673–678. [CI85] P. Simonetto, P.-Y. Koenig, F. Zaidi, D. Archambault, F. Gilbert, T. T. Phan Quang, M. Mathiaut, A. Lambert, J. Dubois, R. Sicre, M. Brulin, R. Vieux, and G. Melançon, Solving the traffic and flitter challenges with tulip, in Proceedings of IEEE Symposium on Vast 2009, 2009, pp. 247–248. [CI86] H. Soueidan, G. Sutre, and M. Nikolski, Qualitative transition systems for the abstraction and comparison of transient behavior in parametrized dynamic models, in Proc. 7th Int. Conf. on Computational Methods in Systems Biology (CMSB’09), Bologna, Italy, Aug.-Sep. 2009, 21, ed., vol. 5688 of Lecture notes in BioInformatics, Springer Verlag, 2009, pp. 313–327. [CI87] S. Ueno, G. Le Provost, V. Léger, C. Klopp, C. Noirot, J.-M. Frigerio, F. Salin, J. Salse, M. Abrouk, F. Murat, O. Brendel, P. Abadie, P. Léger, C. Cabane, A. Barré, A. De Daruvar, A. Couloux, P. Wincker, M.-P. Reviron, A. Kremer, and C. Plomion, Bioinformatic analysis of sanger and 454 ests in oak, in Forest ecosystem genomics and adaptation. Book of abstracts, Biodiversity International, 2010, p. 73. [CI88] R. Uricaru, A. Mancheron, and E. Rivals, Novel definition and algorithm for chaining fragments with proportional overlaps, in RECOMB’10: Comparative Genomics, E. Tannier, ed., vol. 6398 of LNCS, Springer-Verlag, 2010, pp. 161–172. [CI89] N. Vyahhi, A. Goëffon, D. J. Sherman, and M. Nikolski, Swarming along the evolutionary branches sheds light on genome rearrangement scenarios, in ACM SIGEVO Conference on Genetic and evolutionary computation, F. Rothlauf, ed., ACM, 2009. [CI90] X. Yang, F. Sikora, G. Blin, S. Hamel, R. Rizzi, and S. Aluru, An algorithmic view on multirelated-segments: a new unifying model for approximate common interval, in Theory and Applications of Models of Computation, S. B. C. Manindra Agrawal and A. Li, eds., vol. 7287 of LNCS, Springer-Verlag, 2012, pp. 319–329. [CI91] F. Zaidi and G. Melançon, Evaluating the quality of clustering algorithms using cluster path lengths, in 10th Industrial Conference, ICDM, vol. 6171/2010, Springer, 2010, pp. 42–56. [CI92] F. Zaidi and G. Melançon, Identifying the presence of communities in complex networks through topological decomposition and component densities, in EGC 2010, Extraction et Gestion de Connaissance, vol. E-19, RNTI, 2010, pp. 163–174. 340 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI93] F. Zaidi and G. Melançon, Organization of information for the web using hierarchical fuzzy clustering algorithm based on co-occurrence networks, in WI-IAT ’10, vol. 1, 2010, pp. 421–424. [CI94] F. Zaidi and G. Melançon, Topological decomposition and heuristics for high speed clustering of complex networks, in Extraction et Gestion de Connaissance, 2012, Hermann, ed., vol. RNTI-E-23, 2012, pp. 447–458. [CI95] F. Zaidi, A. Sallaberry, and G. Melançon, Revealing hidden community structures and identifying bridges in complex networks: An application to analyzing contents of web pages for browsing, in Proceedings of the 2009 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology, vol. 1, 2009, pp. 198–205. [CI96] A. Zhukova and D. J. Sherman, Knowledge-based zooming for metabolic models, in JOBIM, 2013. Conferences with published proceedings (national) [CN1] R. Assar, A. Garcia, and D. J. Sherman, Modeling stochastic switched systems with biorica, in Journées Ouvertes en Biologie, Informatique et Mathématiques JOBIM 2011, 2011, pp. 297–304. [CN2] D. Auber, P. Mary, M. Mathiaut, J. Dubois, A. Lambert, D. Archambault, R. Bourqui, B. Pinaud, M. Delest, and G. Melançon, Tulip: a scalable graph visualization framework, in Extraction et Gestion des Connaissances (EGC) 2010, S. B. Yahia and J.-M. Petit, eds., vol. RNTI E-19, RNTI, 2010, pp. 623–624. [CN3] A. Ben Zakour, S. Maabout, M. Mosbah, and M. Sistiaga, Relaxing Time Granularity for Mining Frequent Sequences, in Advances in Knowledge Discovery and Management, F. G. B. P. . G. V. . D. A. Zighed, ed., Studies in Computational Intelligence, Springer International Publishing, 2014, pp. 53–76. [CN4] A. Benzakour, S. Maabout, M. Mosbah, and M. Sistiaga, Extraction de séquences fréquentes avec intervalles d’incertitude, in Actes de la 12e Conférence Internationale Francophone sur l’Extraction et la Gestion de Connaissance (EGC), RNTI (Revue des nouvelles technologies de l’information), Hermann, 2012, p. 12 pages. [CN5] C. Blanc, M. Delest, J.-M. Fédou, G. Melançon, and F. Queyroi, Évaluer la qualité d’une fragmentation de graphe multi-niveaux, in Information-Interaction-Intelligence (I3), C. i3, ed., vol. 11, Cépaduès, 2011, p. 1. [CN6] E. Bon, A. Delaherche, E. Bilhere, C. Miot-Sertier, P. Durrens, A. De Daruvar, A. Lonvaud-Funel, and C. Le Marrec, Oenococcus oeni genome plasticity associated with adaptation to wine, an extreme ecological niche, in JOBIM-10èmes Journées Ouvertes en Biologie, Informatique et Mathématiques, E. Rivals and I. Rusu, eds., 2009, pp. 121–122. [CN7] E. Bon, C. Miot-Sertier, M. Dols-Lafargue, G. Morel, A. Lonvaud-Funel, and C. Le Marrec, A 24 kb-genomic island contributing to oenococcus oeni adaptation to wine can excise from the chromosome, in 16th CBL-Club des Bactéries Lactiques Meeting, 2009. [CN8] L. Bourgeade, T. Martin, A. Goulielmakis, A. Lonvaud-Funel, P. Lucas, and E. Bon, Cracking the pseudome code: Inside the "silent" psi-genes language to reconstruct oenococcus oeni evolutionary adaptation to wine, in Proceedings of the 18th CBL-Club des Bactéries Lactiques Meeting, U. C. VetAgroSup, ed., 2012. [CN9] J. Dubois, L. Cottret, A. Ghozlane, D. Auber, F. Bringaud, P. Thébault, F. Jourdan, and R. Bourqui, Visualization of time-series data in the context of metabolic networks with systrip software, in Proceedings of Journées Ouvertes Biologie Informatique Mathématiques, 2013. [CN10] J. Dubois, A. Ghozlane, P. Thébault, I. Dutour, and R. Bourqui, A visualization approach to analyse bacterial srna-mediated regulatory networks, in Proceedings of Journées Ouvertes Biologie Informatique Mathématiques, 2013. BIBLIOGRAPHY 341 [CN11] F. El Garniti, C. Miot-Sertier, M. Dols-Lafargue, E. Bon, A. Lonvaud-Funel, and C. Le Marrec, Is30 elements as mediators of strain diversity in oenococcus oeni, in 16th CBL- Club des Bactéries Lactiques Meeting, 2009. [CN12] E. Garnaud, N. Hanusse, S. Maabout, and N. Novelli, Calcul parallèle de dépendances, in Actes de la conférence BDA (Bases de Données Avancées), 2013, pp. 1–20. [CN13] E. Garnaud, S. Maabout, and M. Mosbah, Dépendances fonctionnelles et matérialisation partielle des cubes de données, in Actes des 7èmes journées francophones sur les Entrepôts de Données et Analyse en ligne, RNTI (Revue des Nouvelles Technologies de l’Information), Hermann, 2011. [CN14] R. Giot, M. Descoteaux, and C. Charrier, Classification de phénomènes de diffusion de l’eau de données d’irm de diffusion, in GRETSI 2013, 2013. [CN15] N. Hanusse, S. Maabout, and R. Tofan, Algorithmes pour la sélection de vues à matérialiser avec garantie de performance, in Actes de la conférence EDA 2009, 2009, pp. 1–15. [CN16] T. Martin and P. Durrens, Génolevures : Politique d’annotation automatique des génomes de levures (yaga), in 10e rencontre Levures Modèles & Outils, 2012. [CN17] T. Martin, D. J. Sherman, and P. Durrens, Génolevures, knowledge base and annotation of hemiascomycete yeast genomes, in Journée Ouvertes Biologie Informatique Mathématiques, JOBIM 2010, 2010. [CN18] T. Martin, D. J. Sherman, M. Nikolski, J.-L. Souciet, and P. Durrens, Base de données génolevures : génomique comparative des hemiascomycetes, in Journée Ouvertes Biologie Informatique Mathématiques, JOBIM 2009, E. Rivals and I. Rusu, eds., 2009, pp. 181–182. [CN19] M. Nadal and G. Melançon, Dessin de graphe assisté par un algorithme génétique, in 9ème édition de la conférence MAnifestation des JEunes Chercheurs en Sciences et Technologies de l’Information et de la Communication - MajecSTIC 2012 (2012), A. Etien, ed., 2012. [CN20] F. Queyroi, Validation et optimisation d’une décomposition hiérarchique de graphes, in 12e Conférence Internationale Francophone sur l’Extraction et la Gestion des Connaissances, 2012. [CN21] B. Renoust, G. Melançon, and M.-L. Viaud, Mesurer l’intrication sémantique dans une collection de documents, in EGC Atelier Fouille de Grands Graphes, 2013, pp. 18–29. [CN22] B. Renoust, M.-L. Viaud, and G. Melançon, Mesure de cohérence dans la découverte et la visualisation d’évènements médiatiques, in Seconde conférence sur les Modèles et l’Analyse des Réseaux: Approches Mathématiques et Informatique (Marami), 2011, p. 4. [CN23] R. RIEKE, M. Zhdanova, J. Repp, R. Giot, and C. Gaber, Verhaltensanalyse zur erkennung von missbrauch mobiler geldtransferdienste, in GI Sicherheit 2014, S. Katzenbeisser, V. Lotz, and E. Weippl, eds., vol. P-228, GI, 2014, pp. 271–282. [CN24] R. Uricaru, C. Michotey, L. Noé, H. Chiapello, and E. Rivals, Improved sensitivity and reliability of anchor based genome alignment, in JOBIM’09 : Journées Ouvertes en Biologie, Informatique et Mathématiques, E. Rivals and I. Rusu, eds., 2009, pp. 31–36. Conferences without published proceedings (international) [SI1] A. Barré, C. Lemaitre, P. Thebault, A. De Daruvar, A. Blanchard, and P. SirandPugnet, Molligen 3.0, evolution of a database dedicated to the comparative genomics of mollicutes, in Congress of the International Organization for Mycoplasmology ; 2010/07/11-16 ; Chianciano Terme (ITA). IOM congress 2010., 2010. [SI2] L. Beven, C. Citti, P. Sirand-Pugnet, D. Marie-Pierre, P. Thebault, E. Sagné, C. Saillard, A. Barré, S. Claverol, A. De Daruvar, J. Renaudin, and A. Blanchard, Shaping the surface proteome of minimal bacteria, in Congress of the International Organization for Mycoplasmology ; 2010/07/11-16 ; Chianciano Terme (ITA). IOM congress 2010, 2010. 342 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [SI3] G. Blin, P. Bonizzoni, R. Dondi, and F. Sikora, On the parameterized complexity of the repetition free longest common subsequence problem, in International Workshop on Approximation, Parameterized and EXact algorithms (APEX’13), A. et al., ed., 2013, p. 3 pp. [SI4] G. Blin, M. Crochemore, S. Hamel, and S. Vialette, Finding the median of three permutations under the kendall-tau distance, in 7th annual international conference on Permutation Patterns, U. degli Studi di Firenze, ed., 2009, p. 6. [SI5] A. Ghozlane, F. Bringaud, F. Jourdan, and P. Thebault, Metaboflux : a method to analyze flux distribution in metabolic networks, in Workshop Metabolomics2010, AmsterdamRAI, the Netherlands, 2010. [SI6] N. Golenetskaya and D. J. Sherman, Assessing ”last mile” tools for affinity binder databases, in 5th ESF Workshop on Affinity Proteomics: Ligand Binders against the Human Proteome, 2011. [SI7] N. Golenetskaya and D. J. Sherman, Rethinking global analyses and algorithms for comparative genomics in a functional mapreduce style, in SeqBio 2011, 2011. [SI8] T. Hume, H. Soueidan, V. F. Wong Jun Tai, A. Vekris, K. Petry, and M. Nikolski, Efficient mapping of short peptides on whole proteome database for biomarker discovery, in JOBIM 2013, 2013. [SI9] A. Lambert and D. Auber, Graph analysis and visualization with tulip-python, in EuroSciPy 2012 - 5th European meeting on Python in Science, 2012. [SI10] N. Loira and D. J. Sherman, Genome-scale metabolic reconstruction of the eukaryote cell factory yarrowia lipolytica, in 11th International Conference on Systems Biology, 2010. [SI11] A. Mancheron, R. Uricaru, and E. Rivals, Ehrlichia ruminantium genome segmentations reveal novel homologous genes, in ISCB Africa ASBCB Joint Conference on Bioinformatics of Infectious Diseases, 2009. [SI12] B. Pinaud, J. Dubois, and G. Melançon, Porgy: Interactive and visual reasoning with graph rewriting systems, in Conf. on Visual Analytics Science and Technology (VAST), 2011 IEEE (Poster Abstract), 2011, pp. 293–294. [SI13] B. Pinaud and G. Melançon, Porgy : réécriture et visualisation de graphes dynamiques, in Extraction et Gestion des Connaissances (EGC 2010), 8e Atelier Visualisation et Extraction de Connaissances, 2010. [SI14] D. J. Sherman, N. Golenetskaya, T. Martin, and P. Durrens, Comparative annotation and scaling-out challenges for paraphyletic strategies, in EMBO Symposium on Comparative Genomics of Eukaryotic Microorganisms: Understanding the Complexity of Diversity, 2011. [SI15] A. Zhukova and D. J. Sherman, Knowledge-based generalization of metabolic networks: An applicational study, in Moscow Conference on Computational Molecular Biology, 2013. [SI16] A. Zhukova and D. J. Sherman, What is the optimal representation of a generalized metabolic model using sbml and sbgn?, in COMBINE 2013, 2013. Conferences without published proceedings (national) [SN1] A. Ghozlane, J. Dubois, I. Dutour, R. Bourqui, M. Breton, and P. Thebault, irna: Integrative pipeline for genome-wide detection of srna targets, in "Autour des ARNs non codant" - Rencontre bioinformatique 2012, 2012. [SN2] T. Martin and P. Durrens, Un polymorphisme suspect, in Unithé ou Café, 2011. [SN3] G. Melançon, M. Noirhomme-Fraiture, and B. Pinaud, Évaluation des interfaces visuelles, in Atelier Visualisation d’informations, interaction et fouille de données - Conférence Extraction et Gestion des Connaissances 2013 (EGC’2013), 2013. BIBLIOGRAPHY 343 [SN4] B. Pinaud, Porgy : un environnement interactif et visuel pour la simulation de systèmes complexes basé sur tulip et sur la réécriture de graphes, in Journée Réseaux Dynamiques, 2012. [SN5] B. Pinaud, Analyse de graphes dynamiques issus d’un processus de réécriture de graphes, in IHM 2013, Groupe de travail "Visualisation d’information, Interaction, et Fouille de données", 2013. Other publications (international) [AI1] D. Auber, D. Archambault, R. Bourqui, A. Lambert, M. Mathiaut, P. Mary, M. Delest, J. Dubois, and G. Melançon, The tulip 3 framework: A scalable software library for information visualization applications based on relational data, tech. rep., 2012. [AI2] G. Blin, Combinatorial Objects in Bio-Algorithmics: Related problems and complexities, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2012. [AI3] A. Garcia and D. J. Sherman, Mixed-formalism hierarchical modeling and simulation with biorica. 2010. [AI4] C. Godin and P. Ferraro, Quantifying the degree of self-nestedness of trees. application to the structural analysis of plants, tech. rep., 2009. [AI5] A. Mancheron, R. Uricaru, and E. Rivals, A novel approach for comparative genomics & annotation transfer. 2010. [AI6] G. Melançon, B. Renoust, and M.-L. Viaud, Mesurer la cohésion sémantique dans les corpus de documents, tech. rep., 2012. [AI7] M. Nadal and G. Melançon, Reusable genomes : Welcome to the green genetic algorithm world, tech. rep., 2013. [AI8] B. Olivier, E. Lutton, P.-H. Wuillemin, C. Baudrit, M. Sicard, B. Pinaud, and N. Perrot, Modeling an agrifood industrial process using cooperative coevolution algorithms, tech. rep., 2009. [AI9] F. Queyroi and Y. Chiricota, Visualization-based communities discovering in commuting networks : a case study, tech. rep., 2011. [AI10] G. A. T. Sacomoto, J. Kielbassa, P. Antoniou, R. Chikhi, R. Uricaru, M.-F. Sagot, P. Peterlongo, and V. Lacroix, kissplice, détection d’évènements d’épissages alternatifs dans les données rna-seq, tech. rep., 2011. [AI11] D. J. Sherman and N. Golenetskaya, Databases and ontologies for affinity binders. Overview of advances in defining ontologies and building knowledge bases for affinity binders, over the four years of the ProteomeBinders project. Presented at the Affinomics/ProteomeBinders workshop at the Møller Center, Churchill College, Cambridge University., 2010. [AI12] D. J. Sherman and N. Loira, Reconstruction and validation of the genome-scale metabolic model of yarrowia lipolytica inl750. JOBIM 2010 Poster, 2010. [AI13] P. Simonetto, Diagrammes d’Euler pour la visualisation de communautés et d’ensembles chevauchants, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2011. [AI14] F. Zaidi, Analyse, Structure et Organisation des Réseaux Complexes, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2010. [AI15] F. Zaidi, A. Sallaberry, and G. Melançon, Generating artificial social networks with small world and scale free properties, tech. rep., 2012. [AI16] A. Zhukova, Metabolic model generalization. 2013. 344 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [AI17] A. Zhukova and D. J. Sherman, Biological knowledge, problem detecting, model refinement and diagnostics. Poster at Joint EMBL-EBI-Wellcome Trust Course: In silico Systems Biology 23-27 April 2012, 2012. Other publications (national) [AN1] W. Dyrka, F. Thirion, J.-C. Nebel, and M. Kotulska, Probabilistic context-free grammars for classification of helix-helix contact sites and recognition of amyloidogenic peptides. 2013. [AN2] P.-Y. Koenig, Visualisation d’information : paradigmes de navigation multi-echelle et approches "focus+contexte", PhD thesis, Université Sciences et Technologies - Bordeaux I, 2009. [AN3] A. Lambert, Visualisation interactive de graphes : élaboration et optimisation d’algorithmes à coûts computationnels élevés, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2012. [AN4] M. Nadal, Assistance à l’utilisateur novice dans le cadre du dessin de graphe à l’aide de méthodes d’apprentissage, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AN5] B. Pinaud, J. Dubois, and G. Melançon, Porgy : une plate-forme visuelle et interactive pour la réécriture de graphes : présentation lors de la journée visu 2012. 2012. [AN6] F. Queyroi, Partitionnement de grands graphes : mesures, algorithmes et visualisation, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AN7] B. Renoust, M.-L. Viaud, and G. Melançon, Cohérence d’évènements médiatiques, tech. rep., 2011. Patents (international) [BI1] B. Martin, P. Hanna, V. T. Ta, M. Desainte-Catherine, J. Allali, M. Robine, and P. Ferraro, Exemplar based assignment of large missing audio parts using string matching on tonal features. patent n◦ US61/547,854., 2011. Patents – J. Allali, Dépôt de brevet: PCT/IB/2012/055673, Titre : A PROCESS FOR ASSIGNING AUDIO DATA IN MISSING AUDIO PARTS OF A MUSIC PIECE AND DEVICE FOR PERFORMING THE SAME Registered software – Visualization Platform, Tulip 3.3.0, Deposit APP: IDDN FR 001 180009 000 S P 2010 000 10000. – SNP detection software, Kissnp2, Deposit APP: IDDN FR 001 320004 000 S A 2013 000 31235 Other software – Plateforme de visualisation Tulip 4.X, environ 27000 téléchargements depuis août 2012 et 500000 lignes de code – rNAV 2.0, http://rnav.labri.fr Completed PhDs – Alexis Clay (20%), 7 décembre 2009, titre “The emotion Branch, a conceptual model for integrating multimodal emotion recognition in interactive software: application to movement and augmented dance”, Post-doctorant estia actuellement – Guillaume Rivière (20%), 9 septembre 2009, titre “Interaction Tangible sur Table Interactive : application aux géosciences”, actuellement Enseignant chercheur permanent ESTIA – Pierre-Yves Koenig, 12 novembre 2009, titre “Visualisation d’information : paradigmes de navigation multi-echelle et approches “focus+contexte”. Université Montpellier II, actuellement ingénieur SSII sur la région de Toulouse. F.4. MABIOVIS 345 – Hayssam Soueidan, 4 décembre 2009, titre ”Discrete Event Modeling and Analysis for Systems Biology Models”; actuellement postdoctorant à SIRIC, Bordeaux – Faraz Zaidi, 15 novembre 2010, titre “Analyse, Structure et Organisation des Réseaux Complexes”, actuellement Associate Professor au PAF KIET, Pakistan. – Radu Tofan, 2010, titre “Bordures : de la sélection de vues dans un cube de données au calcul parallèle de fréquents maximaux”, passage dans une université roumaine comme assistant professeur, puis actuellement ingénieur dans une entreprise en Roumanie. – Arnaud Sallaberry, Visualisation d’information : de la théorie sémiotique à des exemples pratiques basés sur la représentation de graphes et d’hypergraphes. Université Sciences et Technologies - Bordeaux I (18/10/2011), actuellement MCF Université Montpellier 3. – Paolo Simonetto, 2011, titre “Visualisation of Overlapping Sets and Clusters with Euler Diagrams”, actuellement dans l’industrie en Italie. – Rodrigo Assar Cuevas, 21 octobre 2011, titre “Modeling and simulation of Hybrid Systems and Cell factory applications”, actuellement chercheur contractuel à l’Universitad Andres Bello, Santiago (Chili), actuellement Assistant Professor, Instituto de Ciencias Biomédicas (ICBM), University of Chile, Chile – Anne-Laure Gaillard, 30 novembre 2011 , titre “Identification de motifs au sein des structures biologiques arborescentes”, Ingénieur en Technologie de l’Information, Logica, CGI de Bordeaux, (Aquitaine) – Anasuar Sarkar, 15 décembre 2011, titre ””, actuellement ingénieur in Government College of Engineering and Leather Technology, Kolkata, India – Nicolas Loira, janvier 2012, titre “Scaffold-based Reconstruction of Genome-Scale Metabolic Models”; actuellement Researcher FONDECYT Fellowship, Centro de Modelamiento Matemático (CMM), University of Chile, Chile – Frédéric Gilbert, mars 2012, titre “Modèles et méthodes pour l’analyse et la visualisation de données multidimensionnelles dynamiques”, Actuellement industriel à Bordeaux – Asma Ben Zakour, 6 juillet 2012, titre “Extraction des utilisations typiques à partir de données hétérogènes en vue d’optimiser la maintenance d’une flotte de véhicules”, actuellement Ingénieur de Recherche chez Ac2Mo à Bidart – Amine Ghozlane, 20 novembre 2012, titre “Développements de méthodes bioinformatiques dédiées à la prédiction et l’analyse des réseaux métaboliques et des ARNs non codant”, actuellement post-doctorant à l’INRA à Paris – Antoine Lambert, 12 décembre 2012, “Visualisation interactive de graphes : élaboration et optimisation d’algorithmes à coûts computationnels élevés”, actuellement ingénieur de recherche chez Thalès à Paris – Benjamin Martin, 12 décembre 2012, “Analyse de structures répétitives dans les séquences musicales”, actuellement ingénieur de recherche chez SIMBALS – Natalia Golenetskaya, septembre 2013, titre “Addressing scaling challenges in comparative genomics”; actuellement Business Analyst, eBay Inc., Switzerland – Francois Queyroi, octobre 2013, titre ” Mesures et algorithmes de fragmentation multi-échelle de grands ensembles de données”; actuellement Post-doc au LIP6, Univ. Paris 6 et Chargé de recherche CNRS à compter du 1/10/14 – Eve Garnaud, 12 Novembre 2013, “Dépendances fonctionnelles: Extraction et exploitation”. – Benjamin Renoust, décembre 2013, “Analyse et visualisation de l’intrication d’arêtes dans les réseaux multiplex”, actuellement sans emploi. A partir de septembre 2014, Post-doc Japon, UMI Japon France – Maurin Nadal, décembre 2013, “Assistance à l’utilisateur novice dans le cadre du dessin de graphes à l’aide de méthodes d’apprentissage”, actuellement Ingénieur R&D, société Yseop, Lyon including cotutelle PhDs (international) including cotutelle PhDs (national) Completed habilitations – Macha Nikolski, 6th october 2009 (Université Bordeaux I), title “From Genomic to Functional Models”. – David Auber, 7th december 2012, (Université Bordeaux I), title “Visualisation de graphes” 346 F.4.2 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Visibility and attractivity Editorial and organizational activities Steering committee (international) Steering committee (national) – B. Pinaud, G. Melançon : EGC (Extraction et Gestion de Connaissances) (depuis 2012) – B. Pinaud : membre du bureau de la société savante EGC (depuis 2013) Program committee (international) – G. Melançon, program committee of Graph Drawing 2012 – G. Melançon, program committee of ACM CIKM 2011 – G. Melançon, program committee of Eurovis 2009, 2011 – G. Melançon, program committee of IEEE PacificVis 2009 2010 – G. Melançon, program committee of IEEE Infovis (2009-2013) – G. Melançon, program committee of IEEE VAST 2011-2013 – S. Maabout, program committee of DaWaK 2013, 2014 – G. Melançon, program committee of INTERACT 2011 2013 – G. Melançon, program committee of ISVC 2009 2010 – G. Melançon, program committee of IV 2009, 2012, 2013 – G. Melançon, program committee of ACM KDD 2011 – S. Maabout, program committee of DOLAP 2013 – R. Uricaru, program committee of Recomb CG 2013 – M. Nikolski, program committee of Recomb CG 2011,2013,2014 – M. Nikolski, program committee of Recomb WABI 2012 Program committee (national) – G. Melançon, Members of the third Comité mixte franco-américain de la coopération en science et technologie (MENRT) – R. Bourqui, Members of the third Comité mixte franco-américain de la coopération en science et technologie (MENRT) – M. Nikolski, program committee of JOBIM’13 – P. Thébault, program committee of JOBIM’13 – S. Maabout, BDA (2009, 10, 11, 13, 14) – S. Maabout, EDA (2010, 11, 12, 13, 14) – G. Melançon, B. Pinaud EGC 2012 2013 2014 – G. Melançon, IHM 2009, 2011. – R. Giot, RFIA, 2014. – R. Uricaru, SeqBio 2013 – S. Maabout, program committee chair of MEDI 2013 – M. Nikolski, program committee chair of RECOMB-CG 2013 Presidence of program committee (international) – G. Melançon, program committee co-chair, Eurovis 2010 Presidence of program committee (national) – S. Maabout, program committee chair d’EDA 2012 Organizing committee (conferences, seminaries, schools...) (international) – D. Auber, R. Bourqui, G. Melançon, B. Pinaud, Graph Drawing 2013 – M. Nikolski et R. Bourqui, BioNetVis Spécial session dans ISMB-ECCB 2013 BERLIN F.4. MABIOVIS – – – – – 347 G. Melançon, Eurovis 2010, http://eurovis2010.labri.fr/ M. Nikolski, Recomb-CG 2013, Lyon, France M. Nikolski, Workshop on Next Generation Sequencing Technologies, Zvenigorod, Russie, 2010 S. Maabout, FOIKS 2014, http://2014.foiks.org R. Giot, RaSIEM 2013 Organizing committee (conferences, seminaries, schools...) (national) – G. Melançon and B. Pinaud, Extraction et Gestion de connaissances EGC 2012, http://egc2012.labri.fr – S. Maabout, EDA 2012 – T. Martin, Journées GrisBi (Grille, Support pour la Bioinformatique) 2011 – S. Maabout, Comité scientifique pour l’organisation de l’école d’été “Masses de Données Distribuées” 2014, http://webdam.inria.fr/SummerSchool-2014/ Presidence of organizing committee (international) Presidence of organizing committee (national) Journal editorial board (international) – B. Pinaud, co-editor, proceedings of EGC 2012, 2013 – P. Durrens, Journal ISRN Computational Biology, 2012 – D. Sherman, Journal Computational and Mathematical Methods in Medicine, 2010 – M. Delest, editor 1994-2013, The Electronic Journal of Combinatorics – G. Melançon, editor since 2008, Revue I3 (Cépaduès) – G. Melançon, T. Munzner, D. Weiskopf, invited editors, special issue of Computer Graphics Forum – international proceedings of EuroVis 2010 Journal editorial board (national) – B. Pinaud et G. Melançon, invited editor, national journal RNTI from the conference EGC 2012 – S. Maabout,invited editor, national journal RNTI from the confrence EDA 2012 – B. Pinaud : special issue « visualisation de grandes masses de données » of the journal TSI (Technique et Science Informatique). 2014 (numéro 33/4 ou 33/5) Research animation (international) Research animation (national) – Comité de pilotage de l’Institut Francais de Bioinformatique (IFB) – Groupe de travail “Visualisation” (GDR IGRV) – Groupe de travail VIF Visualisation Interactive et Fouille (EGC / AFIHM) Service as expert or evaluator Presidence of expert committee (international) Presidence of expert committee (national) Membership in expert committee (international) – D. Auber, Netherlands Organisation for Scientific Research (2011): Innovational Research – D. Auber, Incentives Scheme , ANR (2009): International Non-Thematic Membership in expert committee (national) – A. de Daruvar, pour la section recherche de l’AERES, évaluation de l’Unité de Recherches en Génomique Info (URGI, UR1164) , 2014 – A. de Daruvar, pour la section établissement de l’AERES, évaluation de l’École Normale Supérieure de Cachan , 2014 348 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – – – – – – – – – M. Delest, Déléguée scientifique AERES, 2009-2012 M. Delest, Déléguée scientifique AERES cordinatrice des STIC, 2012M. Delest, Membre du comité ANR retour Pos-doc 2011-2013 G. Melançon, Membre comité d’évaluation mi-parcours laboratoire ERIC, Université Lyon 2, 2013 G. Melançon, Membre jury ANR CONTINT 2010 G. Melançon, Membre nommé de la section CNU 27 Informatique 2007 2011 S. Maabout, Membre élu du bureau de la section 27 du CNU (2011-2014) P. Durrens, Manager éditorial pour la base Génolevures, 2009M. Nikolski, Membre du Bioinformatics Steering Comittee du SIRIC (Sites de Recherche Intégrée sur le Cancer), BRIO – P. Durrens, Expert en Génomique auprès du Fonds de la Recherche Scientifique-FNRS, Belgique – T. Martin, Membre du comité de pilotage et du comité technique de GRISBIGrille pour la bioinformatique, GIS IBISA, 2008-2010, Lyon France – S. Maabout, Expertises pour le compte des DRRT-Aquitaine, Ile-de-France, Centre et pour le ministère de l’enseignement supérieur et de recherche pour des dossiers de Crédit-Impôt-Recherche – M. Nikolski, Expertises pour le compte de l’Offensive Sciences RMT (Union Européenne), 2011-2012 – M. Nikolski, Expertises auprès de l’ANR pour les projets ANR PDOC, 2012 – P. Thébault, Expertises auprès de l’ANR pour les projets ANR PDOC, 2013 – G. Melançon, Expertise ANR Blanc 2010, CSOSG 2010, SIMI2 2011 – M. Nikolski, Expertises de dossiers auprès de EFS (Etablissement Francais du Sang), 2012 – Expertises pour le compte de l’ANRT pour des dossiers de bourse CIFRE – G. Melançon, Expertise régionale Digiteo (Paris) 2010, INRA/Pays de la Loire 2010 ) – G. Melançon, Expertise NWO (Pays-Bas) 2010 – G. Melançon, Jury évaluation mi-parcours laboratoire ERIC Lyon 2013 – B. Pinaud, Expertise un dossier de thèse pour l’institut des systèmes complexes Paris Ile-de-France, appel à projets 2014, http://www.iscpif.fr/AAP2014 – S. Maabout, Expertise pour l’ANR (2014) Individual expert (reviewer) (international) – Agence A3ES (Portugal), 2013 (M. Delest) – NWO (Netherlands Organisation for Scientific Research, NL) 2010, 2012 (G. Melançon) – Offensive sciences RMT 2012 (M. Nikolski) Presidence of selection board Membership in selection board – S. Maabout, University of Marseille, 2012 – S. Maabout, University of Poitiers, 2012 – S. Maabout, ENSMA, 2013 – S. Maabout, CNAM Paris, 2014 – M. Nikolski, INRA, 2012 – M. Nikolski, INRIA Saclay, 2009 – E. Bon et P. Durrens, Université de Strasbourg, 2009 – G. Melançon, University of Paul Sabatier 2009 (twice) – G. Melançon, University of Montpelier 3, 2009 – G. Melançon, University of Paris 13, 2011 – B. Pinaud, University of Toulouse, 2013 – P. Thébault, University of Toulouse, 2014 – M. Nikolski, University of Toulouse, 2014 F.4. MABIOVIS 349 – R. Bourqui, University of Lyon 1, 2014 – G. Melançon, University of Rennes, 2014 Membership in prize jury – M. Delest, Prix “Femmes en Or”, création de la catégorie Recherche et Innovation, jury member since 2004 – G. Melançon, Prix de thèse EGC 2013 – G. Melançon, Prix de thèse ASTI 2009 Reviewing of PhD or habilitation (international) – M. Nikolski, phd of Ivan V. Kulakovskiy, GosNIIGenetika, Moscou, 2010 – – – – M. Nikolski, phd of Yu. V. Mikhailova, GosNIIGenetika, Moscou, 2009 G. Melançon, Ozan Ersoy, University of Groningen, Pays-Bas, 2013 G. Melançon, Colin Myers, Leeds University, UK, 2013 G. Melançon, Mike Farrugia, University College, Dublin, Ireland, 2012 Reviewing of PhD or habilitation (national) – – – – – – – – – – – – – – M. Nikolski, phd of Yassin Refahi, University of Montpellier, 2011 G. Melançon, HDR of Sylvie Ranwez, University of Montpellier, 2013 G. Melançon, HDR of Hanène Azzag, Université Paris 13 - Paris Sorbonne Cité, 2013 G. Melançon, HDR of Michaël Aupetit, Université d’Orsay Paris Sud, 2012 G. Melançon, HDR of Bénédicte Legrand, Université Pierre et Marie Curie, 2011 G. Melançon, HDR of Clémence Magnien, Université Pierre et Marie Curie, 2010 G. Melançon, PhD of Nicolas Greffard, Université de Nantes, 2013 G. Melançon, PhD of Abdelheq Et-tahir Guettala, Ecole Polytechnique, Université de Tours, 2013 G. Melançon, PhD of Cassio Melo, Ecole Centrale Paris, 2013 G. Melançon, PhD of Juan David Cruz Gomez, ENST Bretagne, 2012 G. Melançon, PhD of Wael Khemiri, Université Paris XI, 2011 G. Melançon, PhD of Eric Mermet, COGIT-IGN, 2011 G. Melançon, PhD of Stéphanie Rialle, Université Montpellier 2, 2010 G. Melançon, PhD of Yann Champclaux, Université Paul Sabatier, Toulouse, 2009 Membership of PhD/habilitation committee (international) Membership of PhD/habilitation committee (national) – – – – – – – – – – – – – M. Nikolski, HDR of Nicolas le Novère, University of Bordeaux, France, 2013 S. Maabout, phd of Isma Sadoune au PRISM, l’UVSQ, 2014 S. Maabout, phd of Maurin Nadal, LaBRI, Bordeaux, 2013 S. Maabout, phd of Chedlia Chakroune, LIAS, ENSMA Poitiers, 2013 S. Maabout, phd of Guillaume Vicien, IMS, Bordeaux, 2010 J. Allali, phd of Cédric Saule, LRI, Orsay, 2010 J. Allali, phd of Michel Chilowicz, LIGM, Marne la Vallée, 2010 G. Melançon, HDR of Cédric Chauve, Université Bordeaux I, 2011 G. Melançon, HDR of Martin Hachet, Université Bordeaux I, 2010 G. Melançon, HDR of Macha Nikolski, Université Bordeaux I, 2009 G. Melançon, PhD of Assia Hamzaoui, LIP6, Paris, 2011 G. Melançon, PhD of Michel Nabaa, Université du Havre, 2011 G. Melançon, PhD of Christophe Hurter, Ecole Nationale Aviation Civile, 2010 350 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Scientific collaborations Projects (international) – INSITE, 2010-2013, FP7 FET,Guy Melançon, coord. David Lane – COSMOS, 2012-2016, FP7, Macha Nikolski,coord. Christophe Steinbeck – Emergence by design (MD), 11-14 , FP7 FET, Guy Melançon, coll. Università Ca’ Foscari Venezia, Venise – PORGY, 2009-2011, Equipe Associée INRIA, Bruno Pinaud Projects (national) – Request, 2014-2017, PIA APP « cloud computing » – Big data, David Auber, coord. Thales – SpeedData, 2013-2016, PIA APP « cloud computing » – Big data, Romain Bourqui, coord. AT Internet – Pep TEAM, 2013-2014, PEPS IDEX-CNRS, Macha Nikolski – MycoRNA, 2013-2014, PEPS IDEX-CNRS, Patricia thébault – rVIZ, 2013-2013, AAP Bordeaux, David Auber – BIO DATA CLOUD, 2014-2015, APP « cloud computing » – Big data, M. Nikolski, coord. Biogemma, 32 KE – SIMID, 2010-2012, FUI, Mosbah, Franck Duluc., EADS – Amadeus, 2012-2013, CNRS: Appel à projet interdisciplinaire, Défi: Masses de données scientifiques, Sofian Maabout – MexCulture, 2012-2015 , ANR, coord. Benois-Pineau , CNAM Paris – EVIDEN, 2012-2014, ANR JCJC, Bruno Pinaud – GRISBI, 2009-2011 Plateforme IBISA Tiphaine Martin, coord. Christophe Blanchet IBCP, Lyon – Génolevures, 2010-2014 , APP Aquitaine, “plate-forme mutualisée”, Pascal Durrens – Dyvi, 2010-2011, ARC INRIA , G. Melançon, coord. E. Fleury, ENS Lyon – GRISBI - IDG, 2009-2010, Soutien par l’Institut des Grilles du projet GRISBI, Tiphaine Martin, coord. Christophe Blanchet, IBCP, Lyon – DIVOENI, 2009-2012, ANR, Elisabeth Bon ,coord. Aline Lonvaud – Self-similarity in Music, 2009-2009, PEPS (CNRS), Pascal Ferraro – BRASERO, 2006-2010, ANR Blanc, Pascal Ferrao, coord. Alain Denise – Blast musical, 2011-2011, DRI - U. Bordeaux 1, Pascal Ferraro – Evolmyco, 2007-2010, ANR-07-GMGE -0, Antoine de Daruvar, coord. Alain Blanchard – ABRIWG, 2012-2014, ANR Chaire d’Excellence, Macha Nikolski, coord. Albert Abbott – SysTryp, 2008-2011, ANR BioSys, Guy Melançon, coord. M. Barrett – TANGUY, 2008-2012, ANR CONTINT, Guy Melançon, coord. J. Rohmer Joint publications (international) – Department of Mathematics of Simon Fraser University (Cédric Chauve), Vancouver, Canada – Cheminformatics and Metabolism Group, European Bioinformatics Institute (EBI), Hinxton, UK – Technical University of Catalonia, Barcelone, Espagne – Netherlands Cancer Institute, Amsterdam, Pays-Bas – PAF Karachi Institute of Economics and Technology, Pakistan – Université de Chicoutimi, Québec, Canada – Ecole de Technologie Supérieure, Montréal, Canada – Dept Computer Science, King’s College, Londres, UK – Université of British Columbia, Vancouver, Canada – Université de Sheffield, South Yorkshire , UK – Università Ca’ Foscari Venezia, Venise, Italie – Chalmers Tekniska Hoegskola AB, Gothenburg, Suede – Technical Universitéy of EIndhoven, Eindhoven, Pays Bas F.4. MABIOVIS – – – – – 351 Faculté des géosciences et de l’environnement. Institut de géographie et durabilité, Lausanne, Suisse. Life science biomedical research center, University of Glasgow, Glasgow, Ecosse. University of Houston, Houston, USA University of Calabria, Calabria, Italy Department of Computing Science, University of Glasgow, Glasgow, UK Joint publications (national) – Ecole normale supérieur de Lyon, France – UMR INRA, UB2 1219 Oenologie, Bordeaux, France – UMR 1332 Biologie du Fruit et Pathologie / INRA / Université de Bordeaux, France – UMR 5536 / Centre de Résonance Magnétique des Systèmes Biologiques (RMSB), France – Service de Rhumatologie – CHU Bordeaux, France – Equipe Neuroinflammation, imagerie et thérapie de la Sclérose en Plaques-Equipe associée, INSERM U1049, France – Institut de la Vigne et du Vin de Bordeaux (ISVV), Bordeaux, France – Equipe VIE, Institut National Audio-Visuel, Paris, France – Inria (siège), Paris, France Other collaborations (international) Other collaborations (national) – Clemson University (Albert Abbott), Clemson, South California, USA – Institute of Biological Research & Biotechnology, NHRF, Athènes, Grèce Research visitors (international) – Aristotelis Chatziioannou, Institute of Biological Research and Biotechnology, NHRF, Athenes, Grèce – Cédric Chauve, Department of Mathematics of Simon Fraser University (Canada) – Carlos Ordonez, Department of Computer Science, University of Houston (USA) Research visitors (national) Research visits (international) – Sherman D. J., Workshop on Evolutionary Algorithms - Challenges in Theory and Practice (2010), Two examples of evolutionary algorithms in reconstructing genome evolution – Sherman D. J., Colloquium LIX, Methods for understanding function and history in small eukaryote genomes (2010) – Golenetskaya N. and Sherman D. J., Moscow Conference on Computational Molecular Biology, Russie (2010), “Addressing scaling-out challenges for comparative genomics” – P. Durrens, Conference “Comparative Genomics of Eukaryotic Microorganisms”, Sant Feliu, Espagne – D. Auber, Dagsthul 2013, Germany, Seminar 13151 “Drawing Graphs and Maps with curve” – D. Auber, Dagsthul 2013, Germany, Seminar 12261 “Putting Data on the Map” – G. Melançon, Dagsthul 2012, Germany, Seminar 13201 “Information Visualization - Towards Multivariate Network Visualization” – D. Auber, Séminaire Dagsthul 2012, Germany, Seminar 11191 “Graph drawing with Algorithm Engineering Methods” – P. Thébault, Open Source Software for Systems, Pathways, Interactions and Networks (SPIN-OSS), the Wellcome Trust Genome Campus, EBI, England, 2012 – M. Nikolski, Open Source Software for Systems, Pathways, Interactions and Networks (SPIN-OSS), the Wellcome Trust Genome Campus, EBI, England, 2012 Research visits (national) – B. Pinaud : école polytechnique of the University of Nantes (since 2011), Master Erasmus-Mundus « Data Mining and Knowledge Management » (DMKM) – B. Pinaud : Université of Havre, 2011. Workshop on dynamic network 352 F.4.3 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Involvement with social, economic and cultural actors Collaborations with the industry Industrial contracts – 2Moro RECORDS project – TDM RECORDS project – FEDD RECORDS project – Nexter RECORDS project – Thales RECORDS project – TurboMeca RECORDS project – Thales RECORDS project – EADS SocataRECORDS project – Airbus, SIMID project – Eurocopter, SIMID project – Dassault, SIMID project – Turbomeca, SIMID project – 2Moro, SIMID project – Vinci, SIMID project – Equip’Aero, SIMID project – Aerospace Valley, FUI projects – SARCO, division recherche l’entreprise LAFFORT – DRTS ltd, Grande Bretagne – INRIA France – i2CAT, Espagne – GAMCO, Espagne – VISup, Italie – Pikko Montpellier – Xerox Grenoble – Thales communication, Colombes – FIDAL, Nanterre – Tech4i2 Limited Royaume Uni – Stichting The Hub NL, Stichting Nederland Kennisland, Pays Bas – Factlink BV, Pays Bas – Euclid Network Limited by Guarantee, UK – Pianob S.L.n Espagne – Mozilla Foundation, USA – AT Internet – INA (Inst. Nat. Audio-Visuel), Paris, FR – QUCIT, Bordeaux, FR – Biogemma, FR Contributions to professional journals and overview publications Reports for decision makers Contributions to standards – Hupo PSI (Protein Standards Initiative) – MIASE (Minimum Information About a Simulation Experiment) – MIAPAR (Minimum information about a protein affinity reagent) Collaborations outside of universities Start-ups F.4. MABIOVIS General audience actions Learned society, federation (international) Learned society, federation (national) Scientific popularization, dissemination of scientific culture Publications for large audience – Vice-Président A. Bordeaux Segalen 2008-2013, A. De Daruvar – Vice-Président A. Bordeaux 1, depuis 2012, S. Dulucq – Directeur de l’IUT Bordeaux 1, 2008-2012, S. Dulucq – Direction du LaBRI , 2007-2010, M. Delest – Direction du CBiB, 2010-, M. Nikolski – Direction du CBiB, 2001-2010, A. de Daruvar – Direction de l’Axe Stratégique Bioinformatique du SIRIC BRIO, M. Nikolski 353 354 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS F.5. PROGRAMMING, NETWORKS AND SYSTEMS F.5 F.5.1 355 Programming, Networks and Systems Scientific production Publications Peer-reviewed journals (international) [RI1] H. Abdeen, S. Ducasse, D. Pollet, I. Alloui, and J.-R. Falleri, The package blueprint: visually analyzing and quantifying package dependencies, Science of Computer Programming, 89 (2014). [RI2] Y. Abe, H. Sasaki, M. Peres, K. Inoue, K. Murakami, and S. Kato, Power and performance analysis of gpu-accelerated systems, USENIX, HotPower’12, (2012). [RI3] A. Amraoui, B. Benmammar, F. Krief, and F. Bendimerad, Intelligent wireless communication system using cognitive radio, International Journal of Distributed and Parallel Systems, 3 (2012), pp. 91– 104. [RI4] V. Autefage and D. Magoni, Virtualisation distribuée de réseaux dynamiques et mobiles avec nemu, REVUE DES NOUVELLES TECHNOLOGIES DE L’INFORMATION, RNTI-SM-2 (2013), pp. 19–38. [RI5] B. Benmammar, A. Amraoui, and F. Krief, A survey on dynamic spectrum access techniques in cognitive radio networks, International Journal of Communication Networks and Information Security (IJCNIS), 5 (2013), pp. 68–79. [RI6] B. Benmammar, B. Benyahia, M. Benhamida, and F. Krief, Centralized dynamic spectrum access in cognitive radio networks based on cooperative and non-cooperative game, WSEAS Transactions on Communications, 13 (2014), pp. 148–161. [RI7] T. F. Bissyandé, L. Réveillère, J. Lawall, Y.-D. Bromberg, and G. Muller, Implementing an embedded compiler using program transformation rules, Software: Practice and Experience, (2013), p. 1..20. [RI8] T. F. Bissyandé, L. Réveillère, J. Lawall, and G. Muller, Ahead of time static analysis for automatic generation of debugging interfaces to the linux kernel, Automated Software Engineering, (2014), pp. 1–39. [RI9] L. Bouchard, J.-M. Berthelot, A. Casteigts, M. Chartier, A. Trugeon, and J. Warnke, Health and social information systems in support of local health planning: issues and challenges, Global Health Promotion, 21 (2014), pp. 15–22. [RI10] S. Boussen, J. Arnaud, F. Krief, N. Tabbane, and S. Tabbane, Iptv qos adaptation for multihomed mobile terminals in a new ims based architecture, Telecommunication System Journal, (2013), p. 12. [RI11] A. Bradai, U. Abbasi, R. Landa, and T. Ahmed, An efficient playout smoothing mechanism for layered streaming in p2p networks, Peer-to-Peer Networking and Applications, Springer, (2012). [RI12] A. Bradai, T. Ahmed, and A. Benslimane, Vicov: Efficient video streaming for cognitive radio vanet, Vehicular communication, Elsevier, (2014), pp. 1–18. [RI13] A. Bradai, T. Ahmed, R. Boutaba, and R. Ahmed, Efficient content delivery scheme for layered video streaming in large-scale networks, Journal of Network and Computer Applications, (2014), pp. 1– 14. [RI14] L. Burgy, L. Réveillère, J. Lawall, and G. Muller, Zebu: A language-based approach for network protocol message processing, IEEE Transactions on Software Engineering, 37 (2011), pp. 575– 591. 356 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI15] A. Casteigts, J. Albert, S. Chaumette, A. Nayak, and I. Stojmenovic, Biconnecting a network of mobile robots using virtual angular forces, Computer Communications, 35 (2012), pp. 1038– 1046. [RI16] A. Casteigts, P. Flocchini, B. Mans, and N. Santoro, Measuring temporal lags in delaytolerant networks, IEEE Transactions on Computers, 63 (2014), pp. 397–410. [RI17] A. Casteigts, P. Flocchini, N. Santoro, and W. Quattrociocchi, Time-varying graphs and dynamic networks, International Journal of Parallel, Emergent and Distributed Systems, 27 (2012), pp. 387–408. [RI18] A. Casteigts, A. Nayak, and I. Stojmenovic, Communication protocols for vehicular ad hoc networks, Wireless Communications and Mobile Computing, 11 (2011), pp. 567–582. [RI19] D. Cao, R. Castanet, P. Felix, and K. Chiew, An approach to automated runtime verification for timed systems: Applications to web services, JOURNAL OF SOFTWARE„ 7 (2014), pp. 1338–1350. [RI20] C. Cassagnes, D. Magoni, H. Chang, W. Wang, and S. Jamin, Scalability and efficiency of push-driven p2ptv systems, Journal of Communications Software and Systems, 7 (2011), pp. 93–103. [RI21] M. A. Chalouf, I. Djama, T. Ahmed, and F. Krief, An end-to-end qos and security joint management for iptv service delivery, International Journal of Autonomous and Adaptive Communications Systems, (2012), pp. 398–416. [RI22] M. A. Chalouf and F. Krief, A secured service level negotiation in ubiquitous environments, International Journal of Communication Networks and Information Security, 1 (2009), pp. 9–18. [RI23] M. A. Chalouf and F. Krief, A secured, automated, and dynamic end-to-end service level negotiation, Journal of Concurrency and Computation: Practice and Experience, 25 (2013), pp. 180–202. [RI24] M. A. Chalouf, N. Mbarek, and F. Krief, Quality of service and security negotiation for autonomous management of next generation networks, International Journal of Network Protocols and Algorithms, 3 (2011). [RI25] S. Chaumette and D. Sauveron, Smart cards and remote computing: Interaction or convergence?, Information Security Technical Report, 14 (2009), pp. 101–110. [RI26] O. Demigha, W. Hidouci, and T. Ahmed, On energy efficiency in collaborative target tracking in wireless sensor network: A review, IEEE Communications Surveys & Tutorials„ 15 (2012), pp. 1210 – 1222. [RI27] F. Djemili Tolba, D. Magoni, P. Lorenz, and W. Ajib, Energy-efficient power allocation algorithms for mobile wireless sensor networks, International Journal of Sensor Networks, (2014), p. 11 pp. [RI28] R. Ducournau and F. Morandat, Perfect class hashing and numbering for object-oriented implementation, Software: Practice and Experience, 41 (2011), pp. 661–694. [RI29] R. Ducournau and F. Morandat, Towards a full multiple-inheritance virtual machine, Journal of Object Technology, 11 (2012), p. 29. [RI30] F. Duhem, F. Muller, W. Aubry, B. Le Gal, D. Negru, and P. Lorenzini, Design space exploration for partially reconfigurable architectures in real-time systems, Elsevier, 59 (2013), pp. 571– 581. [RI31] F. Duhem, F. Muller, W. Aubry, B. Le Gal, D. Négru, and P. Lorenzini, Design space exploration for partially reconfigurable architectures in real-time systems, Journal of Systems Architecture, 59 (2013), pp. 571–581. F.5. PROGRAMMING, NETWORKS AND SYSTEMS 357 [RI32] J.-R. Falleri, X. Blanc, R. Bendraou, M. Aurélio Almeida Da Silva, and C. Teyton, Incremental inconsistency detection with low memory overhead, Software: Practice and Experience, 44 (2014), pp. 621–641. [RI33] G. Gardikis, L. Boula, G. Xilouris, A. Kourtis, E. Pallis, M. Sidibé, and D. Negru, Cross-layer monitoring in iptv networks, IEEE Communications Magazine, 50 (2012), pp. 76 – 84. [RI34] M. Grafl, C. Timmerer, H. Hellwagner, G. Gardikis, G. Xilouris, D. Renzi, S. Battista, E. Borcoci, and D. Negru, Scalable media coding enabling content-aware networking, IEEE MultiMedia, 20 (2013), pp. 30–41. [RI35] A. Jedda, A. Casteigts, G.-V. Jourdan, and H. Mouftah, Bluetooth scatternet formation from a time-efficiency perspective, Wireless Networks, 20 (2014), pp. 1133–1156. [RI36] F. Krief, Y. Bennani, D. Gomes, and J. N. De Souza, Lecsom: a low-energy routing algorithm based on som clustering for static and mobile wireless sensor networks, International Journal on Communications Antenna and Propagation, 1 (2011), pp. 55–63. [RI37] J. Laval, S. Denier, S. Ducasse, and J.-R. Falleri, Supporting simultaneous versions for software evolution assessment, Journal of Science of Computer Programming, (2010). [RI38] J. Laval, J.-R. Falleri, P. Vismara, and S. Ducasse, Efficient retrieval and ranking of undesired package cycles in large software systems, Journal of Object Technology, 11 (2012). [RI39] B. Mathieu, S. Ellouze, N. Schwan, D. Griffin, E. Mykoniati, T. Ahmed, and O. Ribera Prats, Improving end-to-end qoe via close cooperation between applications and isps, IEEE Communications Magazine, 49 (2011), pp. 136 – 143. [RI40] M. Mbaye and F. Krief, The knowledge plane in autonomic networks, International Transactions on Systems Science and Applications, (2009), pp. 69–92. [RI41] S. Medjiah, T. Ahmed, and A. Asgari, Streaming multimedia over wmsns: an online multipath routing protocol, International Journal of Sensor Networks, 11 (2012), pp. 10–21. [RI42] S. Medjiah, T. Ahmed, and R. Boutaba, Avoiding quality bottlenecks in p2p adaptive streaming, IEEE Journal on Selected Areas in Communications, 32 (2014), pp. 734 – 745. [RI43] S. Medjiah, T. Taleb, and T. Ahmed, Sailing over data mules in delay-tolerant networks, IEEE Transactions on Wireless Communications, 13 (2014), pp. 5 – 13. [RI44] D.-E. Meddour, A. Alaeddine, T. Ahmed, and R. Boutaba, A cross layer architecture for multicast and unicast video transmission in mobile broadband networks, Journal of Network and Computer Applications, 35 (2012), pp. 1377–1391. [RI45] J. Mercadal, L. Réveillère, Y.-D. Bromberg, B. Le Gal, T. F. Bissyandé, and J. Solanki, Zebra : Building efficient network message parsers for embedded systems, Embedded Systems Letters, PP (2012), pp. 1–4. [RI46] Q. Minh Thao, D. Ouattara, F. Krief, H. Khalifé, and M. A. Chalouf, Overlap regions and grey model-based approach for interference avoidance in cognitive radio networks, International Conference on Ubiquitous and Future Networks, IEEE ICUFN, (2013). [RI47] M. Mushtaq and T. Ahmed, End-to-end qos provisioning for real-time video streaming over spdriven p2p networks using admission control, Proc. of IEEE International Conference on Communications (IEEE ICC 2009), (2009). [RI48] D. Ouattara, F. Krief, M. A. Chalouf, and O. Hamdi, Amélioration de la phase de détection du spectre d’un système radio cognitive pour le suivi temps réel de patients, Nouvelles Technologies de la Répartition - Colloque francophone sur l’ingénierie des protocoles, NOTERE/CFIP, (2012). 358 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI49] D. Ouattara, F. Krief, M. A. Chalouf, and O. Hamdi, Spectrum sensing improvement in cognitive radio networks for real-time patients monitoring, International Conference on Wireless Mobile Communication and Healthcare, MobiHealth, (2012). [RI50] D. Ouattara, F. Krief, M. A. Chalouf, and O. Hamdi, Un système de prédiction spectrale pour une connectivité permanente dans le cadre du suivi en temps réel de patients, Revue des Nouvelles Technologies de l’Information, volume RNTI, (2013). [RI51] D. Ouattara, Q. Minh Thao, F. Krief, M. A. Chalouf, and H. Khalifé, Mitigating the hospital area communication’s interference using cognitive radio networks, IEEE International Conference on e-Health Networking, Application & Services (IEEE Healthcom), (2013). [RI52] C. Parra, X. Blanc, A. Cleve, and L. Duchien, Unifying design and runtime software adaptation using aspect models, Science of Computer Programming, 76 (2011), pp. 1247–1260. [RI53] T. Taleb, Y. Hadjadj-Aoul, and T. Ahmed, Challenges, opportunities, and solutions for converged satellite and terrestrial networks, IEEE Wireless Communications, 18 (2011), pp. 46 –52. [RI54] T. Tiendrebeogo, D. Ahmat, and D. Magoni, Évaluation de la fiabilité d’une table de hachage distribuée construite dans un plan hyperbolique, Technique et Science Informatiques, 33 (2014), pp. 311– 341. [RI55] T. Tiendrebeogo, D. Ahmat, D. Magoni, and O. Sié, Virtual connections in p2p overlays with dht-based name to address resolution, International Journal On Advances in Internet Technology, 5 (2012), pp. 11–25. Peer-reviewed journals (national) [RN1] M. A. Chalouf and F. Krief, Négociation de niveau de service dans les environnements ubiquitaires, Studia Informatica Universalis, 8 (2010), pp. 1–24. [RN2] F. Sailhan, Y.-D. Bromberg, and V. Issarny, Protocole de découverte de services interopérable en réseau ad hoc, Ingénierie des Systèmes d’Information, 14 (2009), p. 39. Chapters in contributed volumes (international) [CHI1] J. Albert, L. Barrère, S. Chaumette, and D. Sauveron, Wireless sensors (languages/programming/developments tools/examples), in Secure Smart Embedded Devices, Platforms and Applications, K. M. Konstantinos Markantonakis, ed., Springer New York, 2014, pp. 541–564. [CHI2] T. F. Bissyandé, L. Réveillère, Y.-D. Bromberg, J. L. Lawall, and G. Muller, Bridging the gap between legacy services and web services, in Middleware 2010, I. G. C. Mascolo, ed., vol. 6452, Springer, 2010, pp. 273–292. [CHI3] A. Casteigts, P. Flocchini, B. Mans, and N. Santoro, Deterministic computations in timevarying graphs: Broadcasting under unstructured mobility, in Theoretical Computer Science, C. S. C. V. Sassone, ed., vol. 323, Springer, 2010, pp. 111–124. [CHI4] S. Chaumette and D. Sauveron, Wireless sensor nodes, in Secure Smart Embedded Devices, Platforms and Applications, K. M. Konstantinos Markantonakis, ed., Springer New York, 2014, pp. 335– 350. [CHI5] S. Ellouze, B. Mathieu, T. Ahmed, and N. Schwan, Collaboration between networks and applications in the future internet, in Media Networks: Architectures, Applications, and Standards, S. Z. Hassnaa Moustafa, ed., CRC PRESS, 2012. [CHI6] M. Grafl, C. Timmerer, H. Hellwagner, D. Negru, E. Borcoci, D. Renzi, A.-L. Mevel, and A. Chernilov, Scalable video coding in content-aware networks: Research challenges and open issues, in Trustworthy Internet, Springer, 2011, pp. 349–358. BIBLIOGRAPHY 359 [CHI7] V. Issarny, A. Bennaceur, and Y.-D. Bromberg, Middleware-layer connector synthesis: Beyond state of the art in middleware interoperability, in 11th International School on Formal Methods for the Design of Computer, Communication and Software Systems: Connectors for Eternal Networked Software Systems, M. Bernardo and V. Issarny, eds., vol. 6659, Springer, 2011, pp. 217–255. [CHI8] H. Koumaras, D. Negru, E. Borcoci, V. Koumaras, K. Troulos, Y. Lapid, E. Pallis, M. Sidibé, A. Pinto, G. Gardikis, G. Xilouris, and C. Timmerer, Media ecosystems: A novel approach for content-awareness in future networks, in The Future Internet Lecture Notes in Computer Science Volume 6656, 2011, pp 369-380„ Springer, ed., Springer, 2011, pp. 369–380. [CHI9] F. Krief, Self-management of ad hoc sensor networks, in Communicating Embedded Systems: Network Applications, ISTE and Wiley, 2010, p. 32. [CHI10] F. Krief, M. Mbaye, and M. Peres, Autonomic green networks, in Green Networking, ISTE and Wiley, 2012, p. 36. [CHI11] J. Lu, C. Dousson, B. Radier, and F. Krief, Towards an autonomic network architecture for self-healing in telecommunications networks, in Mechanisms for Autonomous Management of Networks and Services, B. S. F. Turck, ed., vol. 6155, Springer, 2010, pp. 110–113. [CHI12] M. Mbaye and F. Krief, A collaborative knowledge plane for autonomic networks, in Autonomic Communication, Springer Book, 2009, pp. 69–90. [CHI13] D. Négru, Y. Hadjadj-Aoul, A. Mehaoua, and A. Kourtis, Ipv6 over dvb-t: Mobility issues, challenges, and enhancements, in Mobility Management and Quality-of-Service for Heterogeneous Networks, D. D. Kouvatsos, ed., River Publishers, 2009, pp. 3–31. Chapters in contributed volumes (national) [CHN1] X. Dolques, J.-R. Falleri, M. Huchard, C. Nebut, M. Rouane Hacene, and P. Valtchev, Le " refactoring " de systèmes logiciels : refactoring de modèles pour l’évolution perfective., in Evolution et maintenance des systèmes logiciels., Hermès-science, 2014. [CHN2] F. Krief, M. Mbaye, and M. Peres, Des réseaux green autonomes, in Le green networking : vers des réseaux efficaces en consommation énergétique, Hermes Science - Lavoisier, 2012, p. 30. Editors of contributed volumes (international) [DI1] F. Krief, Communicating Embedded Systems - Network Applications, ISTE and Wiley, 2010. [DI2] F. Krief, Green Networking, ISTE and Wiley, 2012. Editors of contributed volumes (national) [DN1] F. Krief, Le green networking - Vers des réseaux efficaces en consommation énergétique, Hermes Science - Lavoisier, 2012. [DN2] F. Krief, Green Networking, China Machine Press, 2013. [DN3] F. Krief, J.-M. Pierson, and P. Roose, Nouvelles Technologies de la Répartition - Ingénierie des Protocoles : NOTERE 2012 / CFIP 2012, Cépaduès, 2012. Invited conference talks (international) [II1] A. Bradai, T. Ahmed, and S. Medjiah, Qoe assessment for svc streaming in envision, in IEEE 20th International Conference on Electronics, Circuits, and Systems (IEEE ICECS 2013), 2013. [II2] A. Casteigts, Impact of network dynamics on the feasibility of distributed problems: an overview of early results, in XXI Jornadas de Concurrencia y Sistemas Distribuidos (JCSD), 2013. 360 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [II3] Y. Chen and D. Négru, Toward the deployment of a new media ecosystem for future internet-based content network, in International Conference on Telecommunications and Multimedia (TEMU 2010), 2010. [II4] M. Huchard, X. Dolques, J.-R. Falleri, and C. Nebut, On some complementary trends in model transformation generation, in FTMDD 2010 ICEIS 2010: 2nd International Workshop on Future Trends of Model-Driven Development, 2010. Conferences with published proceedings (international) [CI1] U. Abbasi and T. Ahmed, Cooching: Cooperative prefetching strategy for p2p video-on-demand system, in Wired-Wireless Multimedia Networks and Services Management, vol. 5842/2009, 2009, pp. 195–200, 10.1007/978–3–642–04994–1_18. [CI2] U. Abbasi and T. Ahmed, K-overlay: A kautz tree structure for video on demand system., in The 10th IEEE International Symposium on Network Computing and Applications (IEEE NCA10), 2010, pp. 247 – 252. [CI3] U. Abbasi and T. Ahmed, Swor: an architecture for p2p scalable video streaming using small world overlay, in IEEE Explorer, 2010, pp. 1–5. [CI4] U. Abbasi, M. Mushtaq, and T. Ahmed, Delivering scalable video coding using p2p small-world based push-pull mechanism, in elivering Scalable Video Coding using P2P Small-World based Push-Pull Mechanism, 2009. [CI5] A. Abdelhalim, T. Ahmed, W. Hidouci, and S. Matsuoka, Using bittorrent and svc for efficient video sharing and streaming, in Using Bittorrent and SVC for Efficient Video Sharing and Streaming, 2012, pp. 537 – 543. [CI6] N. A. Aboud, G. Arévalo, J.-R. Falleri, M. Huchard, C. Tibermacine, C. Urtado, and S. Vauttier, Automated architectural component classification using concept lattices, in WICSA 2009 : Joint Working IEEE/IFIP Conference on Software Architecture 2009 & European Conference on Software Architecture 2009, J. S. Flavio Oquendo, Eltjo Poort, ed., 2009, p. 10. [CI7] D. Ahmat, T. F. Bissyandé, and D. Magoni, Towards securing communications in infrastructurepoor areas, in EAI International Conference on e-Infrastructure and e-Services for Developing Countries, 2013, pp. 1–10. [CI8] D. Ahmat and D. Magoni, Muses: Mobile user secured session, in Proceedings of the 5th IFIP Wireless Days International Conference, 2012, pp. 1–6. [CI9] S. Ait Chellouche, J. Arnaud, and D. Négru, Flexible user profile management for contextaware ubiquitous environments, in Consumer Communications and Networking Conference (CCNC), 2010 7th IEEE, 2010. [CI10] S. Ait Chellouche, W. Aubry, D. Négru, and Y. Chen, Home boxes support for an efficient video on demand distribution, in Multimedia and Expo (ICME), 2011 IEEE International Conference on, 2011. [CI11] S. Ait Chellouche, D. Negru, E. Borcoci, and E. Lebars, Content-aware distributed multimedia provisioning based on anycast model towards future media internet, in Consumer Communications and Networking Conference (CCNC), 2011 IEEE, 2011, pp. 880 – 885. [CI12] S. Ait Chellouche, D. Négru, E. Borcoci, and E. Lebars, Anycast-based context-aware server selection strategy for vod services, in GLOBECOM Workshops (GC Wkshps), 2010 IEEE, 2010, pp. 1513 – 1517. [CI13] S. Ait Chellouche, D. Négru, E. Borcoci, and E. Lebars, Context-aware distributed multimedia provisioning based on anycast model towards future media internet, in Consumer Communications and Networking Conference (CCNC), 2011 IEEE, 2011. F.5. PROGRAMMING, NETWORKS AND SYSTEMS 361 [CI14] S. Ait Chellouche, D. Négru, Y. Chen, and M. Sidibé, Home-box-assisted content delivery network for internet video-on-demand services, in Computers and Communications (ISCC), 2012 IEEE Symposium on, 2012. [CI15] J. Albert, T. F. Bissyandé, Y.-D. Bromberg, S. Chaumette, and L. Réveillère, Ubipan: A bluetooth extended personal area network, in The 4th International Workshop on Intelligent, Mobile and Internet Services in Ubiquitous Computing(IMIS 2010) colocated with the International Conference on Complex, Intelligent and Software Intensive Systems (CISIS 2010), 2010, pp. 774–778. [CI16] J. Albert, S. Chaumette, D. Dubernet, and J. Ouoba, Sim-mee - mobilizing your social network, in Proceedings of Smart Mobility 2009, 2009, pp. 1–4. [CI17] M. A. Almeida Da Silva, R. Bendraou, R. Jacques, and X. Blanc, Flexible deviation handling during software process enactment, in Fifteenth IEEE International EDOC Enterprise Computing Conference Workshop Proceedings, 2011, pp. 34–41. [CI18] A. Amraoui, B. Benmammar, F. Krief, and F. T. Bendimerad, Auction-based agent negotiation in cognitive radio ad hoc networks, in ADHOCNETS 2012 : 4th International Conference on Ad Hoc Networks, 2012. [CI19] A. Amraoui, B. Benmammar, F. Krief, and F. T. Bendimerad, Négociations à base d’enchères dans les réseaux radio cognitive, in Nouvelles Technologies de la répartition - Ingénierie des protocoles NOTERE/CFIP 2012, 2012. [CI20] A. Amraoui, B. Benmammar, F. Krief, and F. T. Bendimerad, Négotiations à base d’enchères dans les réseaux radio cognitive, in NOTERE (Nouvelles Technologies de la Répartition)/CFIP (Colloque francophone sur l’ingénierie des protocoles) 2012, 2012. [CI21] J. Arnaud, D. Négru, M. Sidibé, J. Pauty, and H. Koumaras, Adapted iptv service within novel ims architecture, in 5th International Mobile Multimedia Communications Conference, Mobimedia 2009, 2009. [CI22] V. Autefage and D. Magoni, Network emulator: a network virtualization testbed for overlay experimentations, in Proceedings of the 17th IEEE International Workshop on Computer-Aided Modeling Analysis and Design of Communication Links and Networks, 2012, pp. 38–42. [CI23] V. Autefage and D. Magoni, Virtualisation de réseau avec network emulator et application à l’évaluation d’un réseau recouvrant, in Actes du 16ème Colloque Francophone sur l’Ingénierie des Protocoles, 2012, p. 8 pp. [CI24] W. Aubry, B. Le Gal, D. Dallet, S. Desfarges, and D. Négru, A system aproach for reducing power consumption of multimedia devices with a low qoe impact, in 2011 18th IEEE International Conference on Electronics, Circuits and Systems (ICECS), 2011, pp. 5–8. [CI25] W. Aubry, B. Le Gal, D. Négru, S. Desfarges, and D. Dallet, A generic video adaptation fpga implementation towards content- and context-awareness in future networks, in Proceedings of the 2012 Conference on Design and Architectures for Signal and Image Processing (DASIP)„ 2012, pp. 1–7. [CI26] W. Aubry, D. Negru, B. Le Gal, S. Desfarges, and D. Dallet, A generic video adaptation framework towards content - and context - awareness in future networks, in Signal Processing Conference (EUSIPCO), 2012 Proceedings of the 20th European, 2012, pp. 2218 – 2222. [CI27] W. Aubry, D. Négru, B. Le Gal, and D. Dallet, Spatial downsizing impact in the transrating tradeoff for content/context awareness in media network, in Proceedings of the 2012 International Conference on Telecommunications and Multimedia (TEMU), 2012, pp. 158–162. [CI28] W. Aubry, D. Négru, B. Le Gal, S. Desfarges, and D. Dallet, A generic video adaptation framework towards content-and context-awareness in future networks, in 2012 Proceedings of the 20th European Signal Processing Conference (EUSIPCO), 2012, pp. 2218–2222. 362 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI29] Z. Azmeh, J.-R. Falleri, M. Huchard, and C. Tibermacine, Automatic web service tagging using machine learning and wordnet synsets, in WEBIST’10: 6th International Conference, J. Filipe and J. Cordeiro, eds., vol. 75 of Lecture Notes in Business Information Processing (LNBIP), SpringerVerlag, 2011, pp. 46–59. [CI30] M. Barjon, A. Casteigts, S. Chaumette, C. Johnen, and Y. M. Neggaz, Un algorithme de test pour la connexité temporelle des graphes dynamiques de faible densité, in ALGOTEL 2014 – 16èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications, 2014, pp. 1–4. [CI31] M. Ben Mbarka, L. Granboulan, and F. Krief, Using otp with pake: An optimized implementation of a synchronization window, in 4th IFIP International Conference on New Technologies, Mobility and Security (NTMS), 2011, 2011, pp. 1–5. [CI32] M. Ben Mbarka, F. Krief, and O. Ly, Entrusting remote software executed in an untrusted computation helper, in International Conference on Network and Service Security, 2009, 2009, pp. 1–5. [CI33] M. Ben Mbarka, F. Krief, and O. Ly, Modeling long-term signature validation for resolution of dispute, in Theory of Security and Applications Lecture Notes in Computer Science Volume 6993, 2012, vol. 6993, 2012, pp. 78–97. [CI34] T. F. Bissyandé, D. Lo, L. Jiang, L. Réveillère, J. Klein, and Y. Le Traon, Got issues? who cares about it? a large scale investigation of issue trackers from github, in Proceedings of the 24th IEEE International Symposium on Software Reliability Engineering (ISSRE 2013), 2013, pp. 188–197. [CI35] T. F. Bissyandé, L. Réveillère, Y.-D. Bromberg, and J.-R. Falleri, Typhoon : A middleware for epidemic propagation of software updates, in Proceedings of the Third International Workshop on Middleware for Pervasive Mobile and Embedded Computing, 2011, p. 1. [CI36] T. F. Bissyandé, L. Réveillère, Y.-D. Bromberg, J. L. Lawall, and G. Muller, Bridging the gap between legacy services and web services, in Proceedings of the ACM/IFIP/USENIX 11th International Middleware Conference, LNCS 6452, 2010, pp. 273–292. [CI37] T. F. Bissyandé, L. Réveillère, J. L. Lawall, and G. Muller, Diagnosys: Automatic generation of a debugging interface to the linux kernel, in ASE’12 (Best paper award), 2012, pp. 60–69. [CI38] T. F. Bissyandé, F. Thung, D. Lo, L. Jiang, and L. Réveillère, Orion: A software project search engine with integrated diverse software artifacts, in Proceedings of the 18th IEEE International Conference on Engineering of Complex Computer Systems (ICECSS 2013), 2013, pp. 1–4. [CI39] T. F. Bissyandé, F. Thung, D. Lo, L. Jiang, and L. Réveillère, Popularity, interoperability, and impact of programming languages in 100,000 open source projects, in Proceedings of the 37th Annual International Computer Software & Applications Conference (COMPSAC 2013), 2013, pp. 1– 10. [CI40] T. F. Bissyandé, F. Thung, S. Wang, D. Lo, L. Jiang, and L. Réveillère, Empirical evaluation of bug linking, in Proceedings of the 17th European Conference on Software Maintenance and Reengineering (CSMR 2013), 2013, pp. 1–10. [CI41] H. Boujut, J. Benois-Pineau, T. Ahmed, O. Hadar, and P. Bonnet, A metric for no-reference video quality assessment for hd tv delivery based on saliency maps, in Multimedia and Expo (ICME), 2011 IEEE International Conference on, IEEE, 2011, pp. 1–5, 1945–7871. [CI42] H. Boujut, J. Benois-Pineau, T. Ahmed, O. Hadar, and P. Bonnet, No-reference video quality assessment of h.264 video streams based on semantic saliency maps, in Image Quality and System Performance IX, vol. 8293, 2012, pp. 8293–28. [CI43] H. Boujut, J. 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Jiang, D. Lo, J. Lawall, and G. Muller, Understanding the genetic makeup of linux device drivers, in PLOS’13 - 7th Workshop on Programming Languages and Operating Systems, ACM, 2013. [CI146] K. Shami, D. Magoni, H. Chang, W. Wang, and S. Jamin, Impacts of peer characteristics on p2ptv networks scalability, in 28th IEEE Conference on Computer Communications (INFOCOM), 2009, pp. 2736–2740. [CI147] J. Solanki, L. Réveillère, Y.-D. Bromberg, B. Le Gal, and T. F. Bissyandé, Improving the performance of message parsers for embedded systems, in ACM SAC 2013 Proceedings, vol. 2, 2013, p. 1505. [CI148] C. Teyton, J.-R. Falleri, and X. Blanc, Mining library migration graphs, in Reverse Engineering (WCRE), 2012 19th Working Conference on, 2012, pp. 289–298. [CI149] C. Teyton, J.-R. Falleri, and X. Blanc, Automatic discovery of function mappings between similar libraries, in Reverse Engineering (WCRE), 2013 20th Working Conference on, IEEE, ed., 2013, pp. 192 – 201. [CI150] C. Teyton, J.-R. Falleri, F. Morandat, and X. Blanc, Find your library experts, in Reverse Engineering (WCRE), 2013 20th Working Conference on, 2013, pp. 202–211. [CI151] B. Tegawendé, L. Réveillère, and Y.-D. Bromberg, Ubigate: A gateway to transform discovery information into presence information, in UbiGate: A Gateway to Transform Discovery Information into Presence Information, 2009. [CI152] M. Thao Quach, D. Ouattara, F. Krief, H. Khalifé, and M. A. Chalouf, Overlap regions and grey model-based approach for interference avoidance in cognitive radio networks, in Ubiquitous and Future Networks (ICUFN)„ 2013, pp. 642 – 647. [CI153] T. Tiendrebeogo, D. Ahmat, and D. Magoni, Reliable and scalable distributed hash tables harnessing hyperbolic coordinates, in Proceedings of the 5th IFIP International Conference on New Technologies, Mobility and Security, 2012, pp. 1–6. 370 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI154] T. Tiendrebeogo, D. Magoni, and O. Sié, Virtual internet connections over dynamic peer-topeer overlay networks, in 3rd International Conference on Evolving Internet, 2011. [CI155] K. Tomas, M. Petr, F. Morandat, and V. Jan, A fast abstract syntax tree interpreter for r, in Proceedings of the 10th ACM SIGPLAN/SIGOPS International Conference on Virtual Execution Environments, 2014, pp. 89–102. Conferences with published proceedings (national) [CN1] V. Autefage and D. Magoni, Nemu : un outil de virtualisation de réseaux à la demande pour l’enseignement, in JRES 10th, RENATER, ed., 2013. [CN2] J. Briffaut, M. Peres, C. Toinard, J. Rouzaud-Cornabas, B. Venelle, and J. Solanki, Piga-os : Retour sur le système d’exploitation vainqueur du défi sécurité, in RenPar’20 / SympA’14 / CFSE 8, 8ème Conférence Francaise en Systèmes d’Exploitation, 2011. [CN3] C. Cassagnes, D. Magoni, C. Hyunseok, and S. Jamin, Etude du passage à l’échelle d’un système pair-à-pair de diffusion télévisuelle, in 11èmes Journées Doctorales en Informatique et Réseaux, F. Giroire and D. Mazauric, eds., 2010. [CN4] M. Gouyette, O. Barais, J. Le Noir, C. Brun, M. Almeida Da Silva, X. Blanc, D. Exertier, and J.-M. Jézéquel, Movida studio: a modeling environment to create viewpoints and manage variability in views, in IDM- 7éme journées sur l’Ingénierie Dirigée par les Modèles-2011, I. Ober, ed., vol. 1, service reprographie de Polytech, Université Lille I, 2011, pp. 141–145. [CN5] O. Hamdi, M. Maissa, and F. Krief, Génération automatique de signatures par apprentissage pour les systèmes de détection d’intrusions, in 7ème Conférence sur la Sécurité des Architectures Réseaux et Systèmes d’Information, 2012, pp. 1–7. [CN6] F. Morandat, R. Ducournau, and J. Privat, Évaluation de l’efficacité des implémentations de l’héritage multiple en typage statique, in LMO’09 : Langages et Modèles à Objets, RNTI, ed., 2009, pp. 17–32. [CN7] F. Morandat, R. Ducournau, and J. Privat, Evaluation de l’efficacité des implémentations de l’héritage multiple en typage statique, in GPL’10: Journées du GDR Génie de la Programmation et du Logiciel, 2010, p. 15. [CN8] D. Ouattara, F. Krief, M. A. Chalouf, and O. Hamdi, Amélioration de la phase de détection du spectre d’un système radio cognitive pour le suivi temps réel de patients, in Nouvelles Technologies de la Répartition - Colloque francophone sur l’ingénierie des protocoles, NOTERE/CFIP, 2012. Conferences without published proceedings (international) [SI1] A. Amraoui, F. Z. Benidris, B. Benmammar, F. Krief, and F. T. Bendimerad, Toward cognitive radio resource management based on multi-agent systems for improvement of real-time application performance, in Fifth IFIP International Conference on New Technologies, Mobility and Security (NTMS’2012), 2012. [SI2] V. Autefage, S. Chaumette, and D. Magoni, Service discovery and session initiation in a highly dynamic swarm of unmanned vehicles, in 1st AETOS conference: Research challenges for future UAV systems, 2012. [SI3] W. Aubry, D. Négru, and P. Kadionik, Video adaptation acceleration in a home networking context, in Colloque national du GDR SOC-SIP, 2009. [SI4] S. Boussen, N. Tabbane, F. Krief, and S. Tabbane, A context aware vertical handover decision approach based on fuzzy logic, in The fourth International Conference on Communications and Networking, 2014, pp. 1–5. BIBLIOGRAPHY 371 [SI5] T.-D. Cao, R. Castanet, and P. Félix, Services web : du test actif au test passif, in CFIP 2011 Colloque Francophone sur l Ingénierie des Protocoles, 2011. [SI6] X. De Rochefort, Noyau linux : à propos des outils de trace, in ComPAS 2014 : conférence en parallélisme, architecture et systèmes, E. R. A. T. Pascal Felber, Laurent Philippe, ed., 2014. [SI7] M. Foucault, M. Palyart, J.-R. Falleri, and X. Blanc, Computing contextual metric thresholds, in 29th Symposium On Applied Computing, ACM, ed., 2014. [SI8] H. Koumaras, J. Arnaud, D. Négru, and A. Kourtis, An experimental approach of video quality level dependence on video content dynamics, in 5th International Mobile Multimedia Communications Conference, Mobimedia 2009, 2009. [SI9] O. Ly, S. Chaumette, and R. Tabary, Automated software protection through program externalization on memory-limited secure devices, in International Conference on Embedded and Ubiquitous Computing (EUC), 2010. [SI10] M. Mbaye, H. Khalife, and F. Krief, Reasoning services for wireless sensor networks: Towards an autonomous area monitoring, in colloque francophone sur la Gestion de Réseaux Et de Services, 2010. [SI11] M. Mbaye, F. Krief, and H. Soldano, Inductive logic programming for collaborative selfadaptation in next-generation networks", in Conférence Francophone sur l’Apprentissage Automatique, 2010. Conferences without published proceedings (national) [SN1] V. Autefage, Un support d’acculturation à un domaine technologique - contrôle gestuel d’un essaim de drones., in Congrès de la Société Informatique de France 2014, 2014. [SN2] J. Lu, C. Dousson, and F. Krief, Un algorithme distribué à base de graphe causal pour la fonction d’auto-diagnostic des réseaux autonomes, in Congrès DNAC : De Nouvelles Architectures pour les Communications, 2011. [SN3] M. Mbaye and F. Krief, Apprentissage collaboratif de stratégies d’auto-configuration pour les réseaux autonomes, in Les plates-formes autonomiques, 2009. Other publications (international) [AI1] T. Ahmed, U. Abbasi, and S. Medjiah, Efficient iptv services delivery using svc adaptation and cooperative prefetching, IEEE ComSoc Multimedia Communications Technical Committee E-Letter, Special Issue on Mobile IPTV, 6 (2011), pp. 49–50. [AI2] V. Autefage and S. Chaumette, Ardronext - ar.drone 2 extension for swarming and service hosting, tech. rep., 2013. [AI3] T. Bissyandé, L. Réveillère, J. L. Lawall, and G. Muller, Generation of debugging interfaces for linux kernel services, tech. rep., 2011. [AI4] H. Boujut, J. Benois-Pineau, T. Ahmed, O. Hadar, and P. Bonnet, Nr video quality metric with visual saliency from h.264 code stream in lossy network channels. 2012. [AI5] A. Casteigts, The jbotsim library, tech. rep., 2013. [AI6] A. Casteigts and P. Flocchini, Deterministic algorithms in dynamic networks: Formal models and metrics, tech. rep., 2013. [AI7] A. Casteigts and P. Flocchini, Deterministic algorithms in dynamic networks: Problems, analysis, and algorithmic tools, tech. rep., 2013. 372 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [AI8] R. Ducournau and F. Morandat, More results on perfect hashing for implementing object-oriented languages, tech. rep., 2009. [AI9] J.-R. Falleri, C. Teyton, M. Foucault, M. Palyart, F. Morandat, and X. Blanc, The harmony platform, tech. rep., 2013. [AI10] M. Foucault, J.-R. Falleri, and X. Blanc, Code ownership in open-source software. 2014. [AI11] L. Réveillère, Développement de systèmes distribués efficaces: une approche fondée sur les langages métiers, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2011. [AI12] N. Schwan, K. SATZKE, D. Griffin, B. Mathieu, and T. Ahmed, Fostering cooperation between overlay applications and underlying networks, Bell Labs Technical Journal, 16 (2011), pp. 193– 198. [AI13] C. Teyton, J.-R. Falleri, M. Palyart, and X. Blanc, A study of library migration in java software. 2013. [AI14] C. Teyton, M. Palyart, J.-R. Falleri, F. Morandat, and X. Blanc, Automatic extraction of developer expertise. 2014. Other publications (national) [AN1] F. Krief, Les systèmes embarqués communicants. Tutorial Journée technique Captronic, Lyon, 2009. [AN2] F. Krief, Vers une gestion autonome. Tutorial, Sup’Com, Tunis, Tunisie, 2009. [AN3] M. Mbaye and F. Krief, Apprentissage distribué et collaboratif de stratégies pour les réseaux autonomes. Poster présenté lors de la 9ème Conférence Internationale sur les NOuvelles TEchnologies de la REpartition (NOTERE 2009, 2009. [AN4] D. Négru, Un Eco-système de Médias Réseaux basé sur la Conscience du Contexte, du Réseau et du Contenu à destination de l’Internet Media du Futur, PhD thesis, Université Sciences et Technologies Bordeaux I, 2013. [AN5] D. Ouattara, Application de l’apprentissage aux réseaux radio cognitive. 2011. Patents – ZeKMoP, ZeEro Knowledge MObile Phone. A software and NFC hardware system to keep information secure in a phone, thus making a total confidentiality thereof Registered software – AirMod, confidential – Museum Quest, Offline NFC-based application to visit a museum augmented with an interactive quizz – Small Event Ticketing, Offline NFC-based ticketing management system – Visit Helsinky, Offline NFC-based application to visit a city – ZeKMoP, ZeEro Knowledge MObile Phone Other software – Embedded software of CARUS project – FastR, a very fast Java implementation of R – GumTree, a source code differencing tool. – Harmony, a framework for software repository analysis – Diagnosys, a platform for automatically constructing a debugging interface for the Linux kernel – Starlink, a framework to support the execution of high-level protocol specifications – The JBotSim Library, a platform for prototyping distributed algorithms in dynamic networks – Z2Z, a platform for automatically generating network protocol gateways F.5. PROGRAMMING, NETWORKS AND SYSTEMS 373 – NEmu, a network emulator for mobile universes – Nemo, a network mobility engine for NEmu – VND, a virtual network device Completed PhDs – Maïssa Mbaye, 17/12/2009, Les systèmes cognitifs dans les réseaux autonomes : une méthode d’apprentissage distribué et collaboratif situé dans le plan de connaissance pour l’auto-adaptation – Cyril Cassagnes, 12/11/2012, Architecture autonome et distribuée d’adressage et de routage pour la flexibilité des communications dans l’Internet – Ahmat Daouda, 29/09/2014, Définition d’une infrastructure de sécurité et de mobilité pour les réseaux pair-à-pair recouvrants – J. Arnaud, 17/12/2012, Gestion de mobilité efficace et contexte-dépendante dans les réseaux télécoms de nouvelles générations – M. Abbas BRADAI, 10/12/2012, Ordonnancement et Allocation de Bande Passante dans les Systèmes de Streaming Pair-à-Pair Multicouches – M. HugoBOUJUT, 24/09/2012, Mesure sans référence de la qualité des vidéos hautes définition diffusées avec des pertes de transmission – M. Samir MEDJIAH, 10/12/2012, Optimisation des protocoles de routage dans les réseaux multi-sauts sans fil à contraintes – M. Yousri DALDOUL, 28/11/2013, Transport Multicast fiable de la vidéo sur le réseau WiFi – Aymen Chalouf, 3/12/2009, Offre de service dans les réseaux de nouvelle génération : Négociation sécurisée d’un niveau de service de bout en bout couvrant la qualité de service et la sécurité – Moez Ben Mbarka, 6/04/2011, Signatures électroniques avancées : modélisation de la validation à long terme et sécurité des autorités de certification – Jingxian Lu, 19/12/2011, L’auto-diagnostic dans les réseaux autonomes : application à la supervision de services multimédia sur réseau IP de nouvelle génération – Preston Rodrigues, 27/05/2013, Interoperabilité à large échelle dans le contexte de l’Internet du futur – S. Ait Chellouche, 09/12/2011, Délivrance de services médias suivant le contexte au sein d’environnements hétérogènes pour les réseaux médias du futur – W. Aubry, 19/12/2012, Conception en co-design logiciel/matériel d’une plateforme reconfigurable d’adaptation vidéo pour les réseaux du futur – Tégawendé Bissyandé, 12/03/2013, Contributions à l’Amélioration du Debogage des Services Noyau dans un Système d’Exploitation Monolithique – Jonathan Ouoba, 11/12/2013, Etude, conception et validation d’une architecture multi-niveaux mobile à base de terminaux communicants, sécurisés par cartes à puce – Rémi Laplace, 20/12/2012, Applications et Services DTN pour flotte collaborative de drones – W. Cherif, 19/06/2013, Adaptation de contexte basée sur la Qualité d’Expérience dans les réseaux Internet du futur. University of Rennes 1 including cotutelle PhDs (international) – Telesphore Tiendrebeogo, 24/06/2013, Système dynamique et réparti de nommage à indirections multiples pour les communications dans l’Internet, Université de Ouagadougou, Burkina Faso Completed habilitations – Daniel Négru, 5/12/2013, A Networked Media Ecosystem based on *-awareness for Future Media Internet – Laurent Réveillère, 15/11/2011, Développement de systèmes distribués efficaces: une approche fondée sur les langages métiers 374 F.5.2 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Visibility and attractivity Editorial and organizational activities Steering committee (international) – Aetos – CARDIS – WISTP Steering committee (national) – ComPAS Program committee (international) – 2013 QoS-QoE Workshop – ACC-2011 – ADHOCNOW 2009, 2013 – AETOS-RCFRUS 2014 – APWiMob 2014 – AyurInfo-2014 – CAMAD 2008, 2009, 2010, 2011, 2012, 2013, 2014 – CSE 2009 – CSMR 2012, 2013, 2014 – DAIS 2012 – ECMFA 2010, 2011, 2012, 2013 – GC 09 AHSN, 09 CISS, 09 WNS, 11 AHSN, 11 CQRM, 11 WN – GLOBECOM 2009 WNS, 2010 WNS, 2010 AHSN, 2010 - SAC, 2010 - WN, 2011 CQRM, 2013 CQRM, 2012 AHSN, 2012 CISS, 2012 WN, 2013 AHSN, 2013 CQRM, 2013 CogRN, 2013 WN, 2014 AHSN, 2014 CogRN, 2014 WN – GIIS 2012, 2013, 2014 – ICAS 2009 – ICC 09 CISS, 09 SAC, 09 WN, 10 SAS, 10 WNS, 11 AHSM, 11 CISS, 11 CSMA, 11 WNS, 12 AHSN, 12 CSSMA, 12 WN, 13 AHSN, 13 CSS, 13 WN, 14 AHSN, 14 MWN, 15 (03) MWN, 15 (08) CQRM – ICCC’12 - CQR – ICCCN 2011, 2013 (NAPE) – ICCVE 2012, 2013 – ICMR 2012 – ICNC’12 - WN, 13 - WN, 14 - WN, 15 - WN – ICOOOLPS (ECOOP Workshop) 2013, 2014 – IEEE EUSIPCO 2012 (MDCAN Special Session) – IEEE Healthcom 2013, 2014 – IEEE ICECS 2011 (VOTN special session) – IEEE ICME 2011 (WOMAN Workshop) – IEEE JSAC AMS – IEEE MASS 2013 – IEEE TEMU 2010, 2012, 2014 – IEEE WCNC 2011 - Network – IEEE WCNC 2011 - Service and Application – IEEE WCNC 2012 Track 3 Mobile & Wireless – IEEE WCNC 2012 Track 4 SAB F.5. PROGRAMMING, NETWORKS AND SYSTEMS – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – IEEE WCNC 2012 IEEE WCNC 2013 IEEE WCNC 2013 - NETWORKS IEEE WCNC 2015 - Track 3- Mobile and Wireless Networks IEEE WCNC’14 Track 3 : NET IMAGINE 2009 INFOCOM’2014 Workshop on Mobile Cloud Computing ISWCS’2014 - Track 2IUCC 2011 IWCMC 2009 Multimedia over Wireless Symposium IWCMC 2014 Wireless Net Symposium InVeNET 2009 LOCALGOS 2009, 2010 MoWNet’2013 MoWNet’2014 Models 2011, 2012, 2013, 2014 PIMRC 2008 Networks Track PIMRC’09 PIMRC’11 - LPAN PIMRC2012-NET ICSM 2013 ICSME 2014 ICSOFT-PT 2014 UWCSN-2014 UWCSN-2014 W5 - Wireless Vehicular Communications and Networks WCSP’13 WD’11 WISe 2009 WWASN 2009 iCOST’2011 iCOST’2012 ACC 2011 ACM Symposium on Applied Computing from 2010 to 2014 ADVCOMP 2012 AHSN 2013 AICT 2011, 2012, 2013 ANT 2014 AQTR 2010 CSSM 2012, 2013 ComNet 2014 DANMS 2011 DICTAP 2011 ECUMN 2009 GIIS 2009, 2012, 2013 GRES 2010 ICCVE 2012, 2013 375 376 – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS ICDCS 2012 ICN 2011, 2012, 2013, 2014 ICNS 2013, 2014 ICT 2009 ICWUS 2010 GLOBECOM 2007, 2008, 2009, 2010, 2011, 2012, 2013 ICC 2008, 2009, 2010 PIMRC 2013 e-HPWAS 2014 NTMS 2011 AITM 2012 to 2014 CNSR 2009 ICCVE 2013, 2014 INTERNET 2012, 2013 INCoS 2012 ICN 2009, 2010, 2011, 2012, 2013, 2014 ISCI 2013 ISMW 2009 ISWTA 2012 IWCMC 2009 IWCNC 2009 MACE 2009, 2010 MMNS 2009 NTMS 2009, 2012 PLOS 2009 RIVF 2009, 2010, 2012 SIEC 2010, 20111 SMART 2013 SaCoNet 2013, 2014 SaCoNet-III 2012 TEMU 2012 Ubi-HealthTech 2013 WMNC 2009, 2010, 2011, 2012, 2013, 2014 WTS 2009, 2012 WWIC 2014 WiSe 2009, 2010, 2011, 2012 WoMAN 2011, 2012 eHPWAS 2013 Program committee (national) – CFIP 2011 – CFSE 2009, 2011 – ComPAS 2013, 2014 – DNAC 2009, 2010, 2011, 2012 – GRES 2010 – NOTERE/CFIP 2012 Presidence of program committee (national) F.5. PROGRAMMING, NETWORKS AND SYSTEMS 377 – ComPAS 2013 – NOTERE/CFIP 2012 – Future Tech Organizing committee (conferences, seminaries, schools...) (international) – Aetos, 2012 – PERSEUS Summer School 2012, 2013, 2014, Crete, Greece – Ecoop’13 Student Volunteer Chair, Montpellier, France – Splash Demo Chair 2013, 2014 – International conference EuroSys, Paris France, 2010 Organizing committee (conferences, seminaries, schools...) (national) – Journée scientifique IPB 2011, 2012, 2013 – International conference Middleware, Beijing, China, 2013 – RESCOM 2011 – Creation of a series of short seminaries called the “Café papier”, at LaBRI. Presidence of organizing committee (international) – Special issue drones – IJCDS, 2013 – IJCNIS, 2009 – IJCSA, 2013 – IJDPS, 2012 – IJRRCS, 2010 – Hindawi International Journal of Digital Multimedia Broadcasting (IJDMB), special issue on “IP and Broadcasting Systems Convergence”, 2010 – Hindawi Journal of Computer Networks and Communications, special issue on “Advanced Techniques for Multimedia Delivery in Collaborative Networks”, 2012 Presidence of organizing committee (national) Research animation (international) – Member of IFIP 2.11 working group Research animation (national) – ALLISTENE, 2009-2011 – Member of GDR ASR, Pôle Système – Member of GDR GPL – Honorary Chairman of ACM Sigops France Service as expert or evaluator Presidence of expert committee (international) – Netherlands Organisation for Scientific Research (NWO) Presidence of expert committee (national) – Chair of commission 6, CCRRDT du Conseil Regional Aquitaine, 2011-2014 Membership in expert committee (international) – European and International Cooperation Project Management Agency since 2009 – H2020 EU Framework Programme for Research and Innovation since 2013 Membership in expert committee (national) – ANR Blanc 2009 378 – – – – – – – – – – – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS ANR Blanc International 2011 ANR CES 28, 2014 ANR Réseaux du Futur et Services, 2009 ANR SIMI2, 2011 ANR SIMI2, 2012 ANR SIMI2, 2013 ANR VERSO, 2009 ANR VERSO, 2010 ANR appel générique, 2014 ANR INS, 2013 ANR Emergence, 2012 ANR Blanc, 2011 Allocation of doctoral research, UTC, 2010 Allocation of doctoral research, Université Paris 13, 2010 Allocation of doctoral research, Université Paris Descartes, 2010 CIFRE, 2012, 2014 Crédit impôt recherche, 2013-2014 DIM AAP 2010 Stic Amsud 2010 Expertise AERES en 2012 Individual expert (reviewer) (international) – Qatar National Research Fund (QNRF) depuis Nov. 2011 – CRSNG 2010, 2011, 2012, 2013 – Portuguese Foundation for Science adn Technology, 2010 Presidence of selection board – Chairwoman of the selection committee for a Prof. position at Université Paris Descartes, 2009 – Chairwoman of the selection committee for an Associate Prof. position at UTC, 2012 – Chairwoman of the selection committee for an Associate Prof. position at Université Paris Descartes, 2012 Membership in selection board – Prof. position at IPB, 2012, 2013 – Prof. position at Université Paris Descartes, 2012 – Prof. position at IRISA/Université de Bretagne SUD, 2014 – Associate Prof. position at ENSEIRB-MATMECA, 2009, 2010 – Associate Prof. position at ESIREM, 2014 – Associate Prof. position at Institut Polytechnique de Bordeaux (IPB), 2010, 2011 – Associate Prof. position at IUT Bayonne, 2010 – Associate Prof. position at IUT Bordeaux, 2012 – Associate Prof. position at IUT Pays de l’Adour, 2013 – Associate Prof. position at IUT Vitry, 2014 – Associate Prof. position at University of Versailles St Quentin, 2012 – Associate Prof. position at Université Paris Descartes, 2009, 2010 – Associate Prof. position at Université Toulouse, 2009, 2010, 2014 – Associate Prof. position at Université de Lille, 2012 – Associate Prof. position at Université of Grenoble, 2011 – Associate Prof. position at Université of Rennes 1 in 2011, 2013 – Associate Prof. position at Mines de Nancy in 2013 F.5. PROGRAMMING, NETWORKS AND SYSTEMS – – – – – 379 Associate Prof. position at IUT de Bordeaux 1 in 2012 Associate Prof. position at IUT de Lannion in 2011, 2012 Associate Prof. position at UPMC/LIP6 in 2014 Position Atos/Renault at UPMC in 2012 Associate Prof. position at Université de Limoges, 2014 Membership in prize jury – Concours ConceptDrones – Prix Isabelle Attali Reviewing of PhD or habilitation (international) – PhD thesis of Julien Schleich, University of Luxembourg, Luxembourg, 2010 – PhD thesis of Xuefei Leng, Smart Card Centre, Information Security Group, Royal Holloway, University of London, London, UK, 2010 – PhD thesis of Golam Sarwar, The University of New South Wales | UNSW SYDNEY – PhD thesis of F Ghandour, SupCom, 2012 – PhD thesis of L Maalej Frikha, SupCom, 2009 – PhD thesis of Jorge PUISSANT, Mons University, 2012 – PhD thesis of Matthieu GOEMINE, Mons University, 2013 – PhD thesis of Pedro Inacio, University of Beira Interior, 2009 – PhD thesis of Gilles Dubochet, EPFL, 2011 Reviewing of PhD or habilitation (national) – HDR of Leila Merghem-Boulahia, UTT, 2010 – HDR of Mohamed Bakhouya, Université de Haute Alsace, 2013 – HDR of Nicolas Larrieu, Université Toulouse, 2014 – HDR of Selma Boumerdassi, UPMC, 2010 – HDR of Adlen Ksentini – HDR of Olivier LY, 2012 – HDR of Yacine Rebahi (Université de Haute Alsace - Fraunhofer Fokus, Berlin) 2012 – HDR of Helene Waeselynck, INPT-LAAS, 2011 – HDR of Sebastien SALVA, Université Clermont-Ferrand, 2012 – HDR of Stephane MAAG, Université Evry, 2011 – HDR of Yves Mahéo, Laboratoire Valoria, Université de Bretagne Sud / Université Européenne de Bretagne, 2011 – PhD thesis of A. Aroumont, INP Toulouse, 2010 – PhD thesis of A. Hammami, Telecom ParisTech & UPMC, 2013 – PhD thesis of Abderrahim Makhlouf, Université Paris 6, 2009 – PhD thesis of Abdul Razzaq , directeur Ahmed Mehoua, 2011 – PhD thesis of Ahmed Akl , directeurs Thierry GAYRAUD et Pascal BERTHOU, 2011 – PhD thesis of Ahmed Riadh REBAI , directeur M. Christophe Wilbaut et Saïd Hanafi, 2009 – PhD thesis of Alexandra NICULAE , directeur André-Luc Beylot, 2009 – PhD thesis of Amir Djouama , directeur Samir Tohmé, 2010 – PhD thesis of Amélie Medem, Université Paris 6, 2011 – PhD thesis of Arnaud Kaiser, University Paris 13, 2011 – PhD thesis of Asma CHARFI SMAOUI, 2011 – PhD thesis of Assia Hamzaoui, Université Paris 6, 2011 – PhD thesis of B. Jacquemin, Université Toulouse, 2010 – PhD thesis of B. Vidalenc, Telecom SudParis & UPMC, 2012 380 – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of of C. Hounkonnou, Université Rennes, 2013 Carlos GIRALDO RODRIGUEZ, 2011 Christophe Kiennert, Télécom ParisTech, 2012 Constantinos Makassikis, Loria/Supélec, Université Henry Poincaré - Nancy 1, Metz, 2011 David Pradas , directeur Michel Bousquet, 2011 Dominique PICHON , directeur Xavier Lagrange, 2010 E. Amar, UPMC, 2011 E. Trigui, UTT, 2013 EL Hadji Diop, 2014 F. Nivor, Université Toulouse, 2009 Fabier CADORET, 2014 H. Slimani, Université Toulouse, 2013 Houssein Wehbe, 2011 I. Boulanouar, Université Paris-Est, 2014 I. Elloumi, Université Toulouse, 2012 I. Houidi, UPMC, 2010 Ihsan Ullah, 2011 Intesab Hussain, 2013 Iuniana Oprescu, Université Toulouse 3, 2012 J. Boite, UTT, 2012 J. Petit, Université Toulouse, 2011 J. Rouzaud-Cornabas, Université Orléans, 2010 J. Siebert, Université Nancy, 2011 Jingwei Miao, LIRIS Lyon, 2013 Jose Pablo Escobedo Del Cid, Université Evry, 2010 Karel Heurtefeux, 2009 L. Akue, Université Toulouse, 2014 M. Loukil, Telecom SudParis & UPMC, 2012 M. Nafaa, Université d’Evry Val d’Essonne, 2009 M. Sidibé, Université de Versailles Saint-Quentin En Yvelines, 2010 Majd Ghareeb, 2011 Marco BRAMBILLA, 2013 Minh Tuan HO, Université Rennes 1, 2013 Mohamed el Amine Brahmia, 2012 Monia Hamdi, 2012 Mounir Lalalli, Université Evry, 2009 Muhammad Anis, Telecom Bretagne, 2013 N. Kobeissy, UPMC, 2009 N. Matta, UTT, 2014 N. Tao, INP Toulouse, 2009 Nanxing CHEN, Université Rennes 1, 2013 Patrice Raveneau, IRIT Toulouse, 2014 S. Kessal Ouanouche, Telecom ParisTech & UPMC, 2011 S. Natouri, Telecom ParisTech & UPMC, 2014 Selim Ellouze, Université Rennes 1, 2013 Simon Delamare, Télécom ParisTech, 2010 Suman Saha, LIP6/INRIA, 2013 F.5. PROGRAMMING, NETWORKS AND SYSTEMS – – – – – – – – – – – – – PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis of of of of of of of of of of of of of Sylvain Genevès, Lig Grenoble, 2013 Sébastien MOSSER, 2010 Thomas Bourgeau, Université Paris 6, 2013 Tuan Tran Thai, ISAE Toulouse, 2014 W. Werapun, INP Toulouse, 2012 Wassim Ramadan, 2011 Yaning Liu, Université Rennes 1, 2011 Yosra Barouni, Université Paris 6, 2011 Yves Gael Billet, 2012 Z. Movahedi, UPMC, 2011 Z. Sarra Ben Oubira, 2012 Z. Tarek BCHINI, 2010 Zheng HU, Lyon/Grenoble, 2014 Membership of PhD/habilitation committee (national) – HDR of Lilian Bossuet, Laboratoire IMS, Université de Bordeaux – HDR of Daniel Negru, Université Bordeaux, 2013 – HDR of Laurent Réveillère, Université Bordeaux, 2011 – PhD thesis of Céline Thuillet, LaBRI, Univ. Bordeaux 1, 2012 – PhD thesis of Dorice Diane Nyamy, Télécom ParisTech, 2012 – PhD thesis of Henner Jakob, LaBRI, Université de Bordeaux, 2011 – PhD thesis of Yulong FU, Université Pau et Pays Adour, 2014 – PhD thesis of A. Achour, UPMC, 2012 – PhD thesis of A. B. Bagayoko, INP Toulouse, 2012 – PhD thesis of A. Bessaoud, UPMC, 2011 – PhD thesis of C. Ghedira, Telecom SudParis & UPMC, 2011 – PhD thesis of G. Boudour, Université Toulouse, 2010 – PhD thesis of I. Jemili, Université Bordeaux, 2009 – PhD thesis of I. Tou, Université Toulouse, 2012 – PhD thesis of L. Lei, ISAE & Université Toulouse, 2009 – PhD thesis of L. Zhang, Université Toulouse, 2009 – PhD thesis of M. Cheaito, Université Toulouse, 2012 – PhD thesis of R. Makhloufi, UTT, 2012 – PhD thesis of R. Nassar, Telecom ParisTech & UPMC, 2012 – PhD thesis of S. El Moumouhi, UPMC, 2012 – PhD thesis of U. Mir, UTT, 2011 – PhD thesis of W. Bechkit, UTC, 2012 – PhD thesis of Abbas Bradai, Université Bordeaux 1, 12/2012 – PhD thesis of Amel Bennaceur, 2013 – PhD thesis of Christine Louberry, 2010 – PhD thesis of J. Arnaud, University of Bordeaux, December 2012 – PhD thesis of M. Carlos Parra, 2011 – PhD thesis of M. Damien Cassou, 2011 – PhD thesis of M. Ibrahima FALL, 2013 – PhD thesis of M. Julien Mercadal, 2011 – PhD thesis of M. Tegawendé F. Bissyande, 2013 – PhD thesis of M. Xavier Dolques, 2010 – PhD thesis of M. Youssef Ridene, 2011 381 382 – – – – – – – – – – PhD PhD PhD PhD PhD PhD PhD PhD PhD PhD APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS thesis thesis thesis thesis thesis thesis thesis thesis thesis thesis of of of of of of of of of of Asma Riai, 2014 N. Nouri, Université de Nancy, Septembre 2011 M. Olivier Sallenave, Décembre 2012 P. Rodrigues, University of Bordeaux, May 2013 Simon Duquennoy, Université de Lille 1, 2010 Soraya Ait-Chellouche, University of Bordeaux, December 2011 Ubaid Abbasi, Université Bordeaux 1, 04/2012 W. Aubry, University of Bordeaux, December 2012 W. Cherif, University of Rennes 1, June 2013 Yiping Chen, Université Rennes 1, 09/2010 Scientific collaborations Projects (international) – ITEA2, Smart Urban Spaces – European Project : ALICANTE (Media Ecosystem Deployment through Ubiquitous Content-Aware Network Environments – http://www.ict-alicante.eu), FP7 ICT Integrated Project (IP). Cooperation with 20 partners (industries & academia) – European Project : DISEDAN (service and user-based DIstributed SElection of content streaming source and Dual AdaptatioN - http://wp2.tele.pw.edu.pl/disedan/), CHIST-ERA program. Cooperation with the National Institute of Telecommunications, Warsaw, Poland and the University Politechnic of Bucharest, Romania Projects (national) – ANR, ARDMAHN – ANR, DAISIE – ANR, INFRA JVM, 2012-2015 – ANR, DIAFORUS, 2008-2012 – ANR, LICoRNe, 2011-2014 – BQR CAPE 2010 – BQR Bordeaux 1, 2009 – BQR Enseirb, 2009 – BQR Enseirb, 2010 – CNRS-RA SR2D, 2009-2013 – Chameleon, Région Aquitaine, 2010-2013 – Evolog, Région Aquitaine, 2012-2015 – Harmony, Région Aquitaine, 2011-2014 – JIP ICET 2, Asimut – LSD, Université of Bordeaux, 2014 Joint publications (international) – Ahmed Jedda, Ottawa, Canada – Amiya Nayak, Ottawa, Canada – Bernard Mans, Sydney, Australia – Guy-Vincent Jourdan, Ottawa, Canada – Hussein Mouftah, Ottawa, Canada – Ivan Stojmenovic, Ottawa, Canada – Jean-Marie Berthelot, Ottawa, Canada – Joseph Peters, Vancouver, Canada F.5. PROGRAMMING, NETWORKS AND SYSTEMS – – – – – – – – – – – – – – – – – – Louise Bouchard, Ottawa, Canada Marie-Hélène Chomienne, Ottawa, Canada Masafumi Yamashita, Fukuoka, Japan Nicola Santoro, Ottawa, Canada Paola Flocchini, Ottawa, Canada Walter Quattrociocchi, Boston, USA University Polytechnic of Bucharest, Romania (ET team) - 10 publications University of Klagenfurt, Austria (MMC-ITEC team) - 6 publications José Neuman De Souza, Prof. at Federal University of Ceará, Brazil Maïssa Mbaye, Associate Prof. at Université Saint-Louis, Sénégal Sami Tabbane, Prof. at SupCom, Tunisie Univeristy of Luxembourg, Jacques Klein and Yves Le Traon, Luxembourg - 1 publication Singapour Managment University (David Lo and Lingxiao Jiang), Singapour - 5 publications Lancaster (Gordon Blair and Paul Grace), United Kingdom - 3 publications Lancaster (Gordon Blair and Paul Grace), United Kingdom - 3 publications NIT lab, Warsaw, Poland - 3 publications PASIPHAE lab, Crete, Greece - 8 publications Purdue University (Jan Vitek, Tomas Kalibera), US (IN) - 1 publication Joint publications (national) – Afonso Ferreira, Nice, France – Badr Benmammar, Associate Prof. at Université Tlemcen, Algérie – IMS lab, Bordeaux, France (COFI team) - 5 publications – IRISA lab, Rennes (INRIA-Dionysos team) - 4 publications – LEAT lab, University of Nice - 1 publication – Thomson Grass Valley/Thomson Video Networks, Rennes - 6 publications – Viotech Communications, Paris - 11 publications – Emmanuel Godard, Marseille, France – Frédéric Amblard, Toulouse, France – Frédéric Guinand, Le Havre, France – Mohamed Aymen Chalouf, Associate Prof. at IUT Lannion – Nader Mbarek, Associate Prof. at ESIREM – University College Dublin - School of CSI - PEL – Yoann Pigné, Le Havre, France – INRIA/LIP6 (Julia Lawall, Gilles Muller and Gaël Thomas), Paris, France - 10 publications – Bertrand Le Gal, IMS, Bordeaux, 2 publications, France – LIP6 (Gaël Thomas), Paris, France - 1 publication – CNAM/CEDRIC (Françoise Sailhan), Paris, France - 1 publication – INRIA/LIP6 (Reda Bendraou), Paris, France - 1 publications – INRIA (Stéphane Ducasse), Lille, France - 2 publications – LIRMM (Marianne Huchard), Montpellier, France - 1 publications Other collaborations (international) – Ahmed Karmouch, Prof. at University of Ottawa Research visitors (international) – Carlos Gomez-Calzado, San Sebastian, Spain, 3 months in 2014 – Paul Grace, University of Lancaster, United Kingdom1 month, 2010 – Paul Grace, University of Lancaster, United Kingdom1 month, 2011 383 384 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – Paul Grace, University of Lancaster, United Kingdom, 1 month, 2012 – David Lo, SMU, Singapor, 1 week, 2013 Research visitors (national) – Di Cosmo, 2014 – Gaël Thomas, associate prof., Paris, 2 weeks, 2010 – Johann Bourcier, associate prof., Rennes, 1 month, 2013 – José Neuman De Souza, 2010 – Mons University, Tom Mens, 2011 – Sonia Ben Mokhtar, CR CNRS Lyon, 2010 – Sonia Ben Mokhtar, CR CNRS Lyon, 2012 – Floréal Morandat, Post-doc from Purdue University, Feb. 2012 – Jean Privat, UQAM, June 2013 – Vivien Quéma, associate prof., Grenoble, 2 weeks, 2010 – D. Sauveron, Univ. de Limoges Research visits (international) – Indian Statistical Institute, Kolkata (India), 2 weeks in 2014 – Macquarie University, Sydney (Australia), 5 weeks in 2011 – Simon Fraser University, Vancouver (Canada), 1 week in 2011 – SMU, Singapor, 2 weeks, 2013 – SMU, Singapor, 2 weeks, 2014 Research visits (national) – BUAA, Chine, 2013 – DIKU, Danemark, 2 weeks, 2009 – DIKU, Danemark, 2 weeks, 2009 – Dagsthul Seminar ”Automated Reasoning on Conceptual Schemas”, May 2014 – Dagsthul Seminar ”Cloud-based Software Crowdsourcing”, September 2014 – Grenoble, INRIA project team SARDES, 2 months, 2011 – Grenoble, LIG team ERODS, 1 week, 2013 – Lancaster, INFOLAB21 team, 2 weeks, 2012 – Rocqencourt, INRIA project team ARLES, 1 week, 2011 – Université du Havre, 1 week, 2009 – Université du Havre, 1 week, 2014 – Marel Team, LIRMM, 2013 F.5.3 Involvement with social, economic and cultural actors Collaborations with the industry Industrial contracts – AirMod – PhD Cifre, AKKA, 2014-2016 – PhD Cifre, Cryptolog, 2008-2011 – Industrial project Sogeti-LaBRI : Multibox (Composing Networked Multimedia Services and deployment of a Demonstration Platform under Mobile Systems), within the Sogeti-LaBRI partnership; 2011-2012 – Industrial project Thomson-LaBRI : Convergence IMS (Convergence of services for heterogeneous environments in Next Generation IMS Networks), research contract with Thomson Grass Valley, Rennes; 2008-2011 F.5. PROGRAMMING, NETWORKS AND SYSTEMS 385 Contributions to professional journals and overview publications – Systèmes d’information sociosanitaire à l’appui de la planification locale de la santé: défis et enjeux. In Global Health Promotion, Vol. 21, Issue 1, 15-22, 2014 Reports for decision makers – Deterministic Algorithms in Dynamic Networks: Formal Models and Metrics. Commissioned report for Defense Research and Development Canada (DRDC). 82 pages, 2013. – Deterministic Algorithms in Dynamic Networks: Problems, Analysis, and Algorithmic Tools. Commissioned report for Defense Research and Development Canada (DRDC). 92 pages, 2013. – Reports for commission veille et prospective du Conseil Econonomique Social et Environnemental Regional, 6 reports 2011-2013 Collaborations outside of universities – DGA – Deev Interactions – Fly-n-Sense – Gemalto – Groupe CEV – NXP – Thales – US Military Academy West Point – Hôpital Montfort, Ottawa, Canada – Irdeto Canada, Ottawa, Canada – Thales Start-ups – NFC-Interactive, 2014 General audience actions Scientific popularization, dissemination of scientific culture – Captronic, Lyon, juin 2009 – LIFO, Orleans, mars 2012 – SupCom, mars 2009 – CEBIT Exhibition 2012, 2013: one of Europe’s biggest event in IT business. Poster presentation and demonstrations – CES (Consumer Electronics Show) 2013, 2014: world’s biggest event in Consumer Electronics. Poster presentation and demonstrations – Fete de la Science, Bordeaux 2012, 2013. Demonstrations to young students F.5.4 Misc – Director of the IPB/ENSEIRB-MATMECA Networking and Information Systems Department (teaching dpt.), since 2009 – Member of the Enseirb-Matmeca research board, 2013 – Member of the IPB Teaching Board, since 2013 – Member of the IPB/ENSEIRB-MATMECA Board, since 2004 – Member of the LaBRI laboratory board (3 members) – Member of the LaBRI laboratory committee selection board (2 members) – Member of the IPB research board, 2010-2014 – Member of the UFR Maths-Info board, 2009-2010 386 – – – – Member Member Member Member APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS of of of of the the the the Bordeaux Science Agro research board, 2012-2014 LIFO research board, 2012-2014 LaBRI laboratory research board (5 members) GIS Albatros board F.6. SATANAS F.6 F.6.1 387 Supports and Algorithms for High Performance Numerical Applications Scientific production Publications Peer-reviewed journals (international) [RI1] R. Abdelkhalek, H. Calandra, O. Coulaud, G. Latu, and J. Roman, Fast seismic modeling and reverse time migration on a graphics processing unit cluster, Concurrency and Computation: Practice and Experience, 24 (2012), pp. 739–750. [RI2] R. Abgrall, P. Ramet, and R. Huart, Numerical simulation of unsteady mhd flows and applications, MagnetoHydroDynamics Journal, 45 (2009), pp. 225–232. [RI3] E. Agullo, B. Bramas, O. Coulaud, E. Darve, M. Messner, and T. Takahashi, Task-based fmm for multicore architectures, SIAM Journal on Scientific Computing, 36 (2014), pp. 66–93. [RI4] E. Agullo, C. Coti, T. Herault, J. Langou, S. Peyronnet, A. Rezmerita, F. Cappello, and J. Dongarra, Qcg-ompi: Mpi applications on grids, Future Generation Computer Systems, (2010). [RI5] E. Agullo, L. Giraud, A. Guermouche, A. Haidar, and J. Roman, Parallel algebraic domain decomposition solver for the solution of augmented systems, Advances in Engineering Software, (2012). [RI6] E. Agullo, L. Giraud, A. Guermouche, and J. Roman, Parallel hierarchical hybrid linear solvers for emerging computing platforms, Compte Rendu de l’Académie des Sciences : Serie Mécanique, 339 (2011), pp. 96–103. [RI7] E. Agullo, A. Guermouche, and J.-Y. L’Excellent, Reducing the i/o volume in an out-of-core sparse multifrontal solver, SIAM Journal on Scientific Computing, 31 (2010), pp. 4774–4794. [RI8] P. Amestoy, I. S. Duff, A. Guermouche, and T. Slavova, Analysis of the solution phase of a parallel multifrontal approach, Parallel Computing, (2009). [RI9] C. Augonnet, S. Thibault, R. Namyst, and P.-A. Wacrenier, Starpu: a unified platform for task scheduling on heterogeneous multicore architectures, Concurrency and Computation: Practice and Experience, 23 (2011), pp. 187–198. [RI10] D. Barthou, O. Brand-Foissac, O. Pene, G. Grosdidier, R. Dolbeau, C. Eisenbeis, M. Kruse, K. Petrov, and C. Tadonki, Automated code generation for lattice quantum chromodynamics and beyond, Journal of Physics: Conference Series, 510 (2014), p. 012005. [RI11] M. Barrault, B. Lathuilière, P. Ramet, and J. Roman, Efficient parallel resolution of the simplified transport equations in mixed-dual formulation, Journal of Computational Physics, 230 (2011), pp. 2004–2020. [RI12] A. Benoit, L.-C. Canon, E. Jeannot, and Y. Robert, Reliability of task graph schedules with transient and fail-stop failures: complexity and algorithms, Journal of Scheduling, 15 (2012), pp. 615– 627. [RI13] B. Bertran, J. Bruneau, D. Cassou, N. Loriant, E. Balland, and C. Consel, Diasuite: a tool suite to develop sense/compute/control applications, Science of Computer Programming, Fourth special issue on Experimental Software and Toolkits, (2012). [RI14] F. Broquedis, N. Furmento, B. Goglin, P.-A. Wacrenier, and R. Namyst, Forestgomp: an efficient openmp environment for numa architectures, International Journal of Parallel Programming, (2010). 388 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [RI15] J. Bruneau and C. Consel, Diasim: A simulator for pervasive computing applications, Software: Practice and Experience, (2012). [RI16] L.-C. Canon, O. Dubuisson, J. Gustedt, and E. Jeannot, Defining and controlling the heterogeneity of a cluster: the wrekavoc tool, Journal of Systems and Software, 83 (2010), pp. 786–802. [RI17] L.-C. Canon and E. Jeannot, Evaluation and optimization of the robustness of dag schedules in heterogeneous environments, IEEE Transactions on Parallel and Distributed Systems, 21 (2010). [RI18] D. Cassou, J. Bruneau, C. Consel, and E. Balland, Towards a tool-based development methodology for pervasive computing applications, IEEE TSE: Transactions on Software Engineering, 38 (2012), pp. 1445–1463. [RI19] M. Chanaud, L. Giraud, D. Goudin, J.-J. Pesqué, and J. Roman, A parallel full geometric multigrid solver for time harmonic maxwell problems, SIAM Journal on Scientific Computing, 36 (2014). [RI20] L. Djoudi, J.-T. Acquaviva, and D. Barthou, Compositional approach applied to loop specialization, Concurrency and Computation: Practice and Experience, 21 (2009). [RI21] Z. Drey and C. Consel, Taxonomy-driven prototyping of home automation applications : a noviceprogrammer visual language and its evaluation, Journal of Visual Languages and Computing, (2012). [RI22] F. Dupros, F. De Martin, E. Foerster, D. Komatitsch, and J. Roman, High-performance finite-element simulations of seismic wave propagation in three-dimensional non linear inelastic geological media, Parallel Computing, 36 (2010), pp. 308–325. [RI23] S. Genaud, E. Jeannot, and C. Rattanapoka, Fault management in p2p-mpi, International Journal of Parallel Programming, 37 (2009), pp. 433–461. [RI24] L. Ghemtio, E. Jeannot, and B. Maigret, Efficiency of a hierarchical protocol for highthroughput structure-based virtual screening on grid5000 cluster grid, Open Access Bioinformatics, 2 (2010), pp. 41– 53. [RI25] B. Goglin, High-performance message passing over generic ethernet hardware with open-mx, Parallel Computing, 37 (2011), pp. 85–100. [RI26] B. Goglin, Nic-assisted cache-efficient receive stack for message passing over ethernet, Concurrency and Computation: Practice and Experience, 23 (2011), pp. 199–210. [RI27] B. Goglin and S. Moreaud, Knem: a generic and scalable kernel-assisted intra-node mpi communication framework, Journal of Parallel and Distributed Computing, 73 (2013), pp. 176–188. [RI28] B. Goglin, J. Squyres, and S. Thibault, Hardware locality: Peering under the hood of your server, Linux Pro Magazine, (2011), pp. 28–33. [RI29] J. Gustedt, E. Jeannot, and M. Quinson, Experimental methodologies for large-scale systems: a survey, Parallel Processing Letters, 19 (2009), pp. 399–418. [RI30] E. Jeannot, Symbolic mapping and allocation for the cholesky factorization on numa machines: Results and optimizations, International Journal of High Performance Computing Applications, 27 (2013), pp. 283–290. [RI31] E. Jeannot, G. Mercier, and F. Tessier, Process placement in multicore clusters: Algorithmic issues and practical techniques, IEEE Transactions on Parallel and Distributed Systems, (2013). [RI32] E. Jeannot, E. Saule, and D. Trystram, Optimizing performance and reliability on heterogeneous parallel systems: Approximation algorithms and heuristics, Journal of Parallel and Distributed Computing, 72 (2012), pp. 268–280. [RI33] P. Koval, D. Foerster, and O. Coulaud, Fast construction of the kohn–sham response function for molecules, Physica Status Solidi B, 247 (2010), p. 1841–1848. BIBLIOGRAPHY 389 [RI34] P. Koval, D. Foerster, and O. Coulaud, A parallel iterative method for computing molecular absorption spectra, Journal of Chemical Theory and Computation, 6 (2010), pp. 2654–2668. [RI35] D. Mbengoue, D. Genet, C. Lachat, E. Martin, M. Mogé, V. Perrier, F. Renac, M. Ricchiuto, and F. Rue, Comparison of high order algorithms in aerosol and aghora for compressible flows, ESAIM: Proceedings, 43 (2013), pp. 1–16. [RI36] J. Mercadal, Z. Drey, and C. Consel, Denotational semantics of a user-oriented, domainspecific language, Electronic Proceedings in Theoretical Computer Science, 129 (2013), pp. 229–249. [RI37] S. Moustafa, I. Dutka Malen, L. Plagne, A. Ponçot, and P. Ramet, Shared memory parallelism for 3d cartesian discrete ordinates solver, Annals of Nuclear Energy, (2014). [RI38] F. Pellegrini, Current challenges in parallel graph partitioning, Comptes-Rendus de l’Académie des Sciences, Mécanique, 339 (2011), pp. 90–95. Peer-reviewed journals (national) [RN1] L. Aguilova, H. Sauzéon, É. Balland, C. Consel, and B. N’Kaoua, [aggir scale: a contribution to specifying the needs of disabled elders]., Revue Neurologique, 170 (2014), pp. 216–21. [RN2] S. Mahmoudi, P. Manneback, C. Augonnet, and S. Thibault, Traitements d’images sur architectures parallèles et hétérogènes, Technique et Science Informatiques, (2012). [RN3] H. Sylvain, A. Denis, and D. Barthou, Programmation unifiée multi-accélérateur opencl, Techniques et Sciences Informatiques, 31 (2012), pp. 1233–1249. [RN4] C. Vuchener and A. Esnard, Équilibrage dynamique avec nombre variable de processeurs par une méthode de repartitionnement de graphe, Technique et Science Informatiques (TSI), 31 (2012), pp. 1251– 1271. Contributed volumes (international) [OI1] E. Jeannot, R. Namyst, and J. Roman, Proceedings of Euro-Par 2011 Parallel Processing - 17th International Conference, Part II, vol. 6853, Springer, 2011. [OI2] E. Jeannot, R. Namyst, and J. Roman, Proceedings of Euro-Par 2011: Parallel Processing Workshops - CCPI, CGWS, HeteroPar, HiBB, HPCVirt, HPPC, HPSS, MDGS, ProPer, Resilience, UCHPC, VHPC, Bordeaux, France, August 29 - September 2, 2011, Revised Selected Papers, Part I, vol. 7155, Springer, 2012. [OI3] E. Jeannot, R. Namyst, and J. Roman, Proceedings of Euro-Par 2011: Parallel Processing Workshops - CCPI, CGWS, HeteroPar, HiBB, HPCVirt, HPPC, HPSS, MDGS, ProPer, Resilience, UCHPC, VHPC, Bordeaux, France, August 29 - September 2, 2011, Revised Selected Papers, Part II, vol. 7156, Springer, 2012. [OI4] E. Jeannot, J. Roman, and R. Namyst, Proceedings of Euro-Par 2011 Parallel Processing - 17th International Conference, Part I, vol. 6852, Springer, 2011. [OI5] E. Jeannot and J. Zilinskas, High Performance Computing on Complex Environments, Wiley, 2014. [OI6] F. Pellegrini and S. Canevet, Droit des Logiciels, Presses universitaires de France, 2013. [OI7] P. Vicat-Blanc Primet, B. Goglin, R. Guillier, and S. Soudan, Computing Networks: From Cluster to Cloud Computing, Wiley-ISTE, 2011. Contributed volumes (national) 390 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [ON1] B. Goglin, Réseaux rapides et stockage distribué dans les grappes de calculateurs, Editions Universitaires Européennes, 2010. [ON2] P. Vicat-Blanc Primet, R. Guillier, S. Soudan, and B. Goglin, Réseaux de calcul - des grappes aux nuages de calcul, Hermès Science - Lavoisier, 2010. Chapters in contributed volumes (international) [CHI1] E. Agullo, C. Augonnet, J. Dongarra, H. Ltaief, R. Namyst, S. Thibault, and S. Tomov, Faster, cheaper, better – a hybridization methodology to develop linear algebra software for gpus, in GPU Computing Gems, W. mei W. Hwu, ed., vol. 2, Morgan Kaufmann, 2010. [CHI2] P. R. Amestoy, A. Buttari, I. S. Duff, A. Guermouche, J.-Y. L’Excellent, and B. Uçar, The multifrontal method, in Encyclopedia of Parallel Computing, D. Padua, ed., Springer, 2011, pp. 1209–1216. [CHI3] P. R. Amestoy, A. Buttari, I. S. Duff, A. Guermouche, J.-Y. L’Excellent, and B. Uçar, Mumps, in Encyclopedia of Parallel Computing, D. Padua, ed., Springer, 2011, pp. 1232–1238. [CHI4] P. R. Amestoy, A. Buttari, A. Guermouche, J.-Y. L’Excellent, and B. Uçar, The minimum degree ordering with dynamical constraints, in Abstracts of the 5th SIAM Workshop on Combinatorial Scientific Computing, M. Beckers, J. Lotz, V. Mosenkis, and U. Naumann, eds., SIAM, 2011, pp. 36–38. [CHI5] D. Balouek, A. Carpen Amarie, G. Charrier, F. Desprez, E. Jeannot, E. Jeanvoine, A. Lèbre, D. Margery, N. Niclausse, L. Nussbaum, O. Richard, C. Pérez, F. Quesnel, C. Rohr, and L. Sarzyniec, Adding virtualization capabilities to the grid’5000 testbed, in Cloud Computing and Services Science, I. Ivanov, M. Sinderen, F. Leymann, and T. Shan, eds., vol. 367, Springer International Publishing, 2013, pp. 3–20. [CHI6] O. Coulaud, L. Giraud, P. Ramet, and X. Vasseur, Deflation and augmentation techniques in krylov linear solvers, in Developments in Parallel - Distributed - Grid and Cloud Computing for Engineering, B. Topping and P. Ivanyi, eds., Saxe-Coburg Publications, 2013. [CHI7] P. De Oliveira Castro, S. Louise, and D. Barthou, Dsl stream programming on multicore architectures, in Programming multi-core and many-core computing systems, John Wiley and Sons, 2014. [CHI8] C. Germain-Renaud, V. BRETON, P. Clarysse, B. Delhay, Y. Gaudeau, T. Glatard, E. Jeannot, Y. Legre, J. Montagnat, J.-M. Moureaux, A. Osorio, X. Pennec, J. Schaerer, and R. Texier, Grid analysis of radiological data, in Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare, M. C. (Ed.), ed., IGI, 2009, pp. 363–391. [CHI9] T. Hoefler, E. Jeannot, and G. Mercier, An overview of process mapping techniques and algorithms in high-performance computing, in High Performance Computing on Complex Environments, E. Jeannot and J. Zilinskas, eds., Wiley, 2014, pp. 65–84. [CHI10] F. Pellegrini, Parallelization of graph partitioning, in Graph Partitioning, I. Wiley, ed., ISTE Wiley, 2011, pp. 81 – 114. [CHI11] F. Pellegrini, Static mapping of process graphs, in Graph Partitioning, I. Wiley, ed., ISTE Wiley, 2011, pp. 115–136. [CHI12] F. Pellegrini, Scotch and pt-scotch graph partitioning software: An overview, in Combinatorial Scientific Computing, O. S. Uwe Naumann, ed., Chapman and Hall/CRC, 2012, pp. 373–406. Chapters in contributed volumes (national) BIBLIOGRAPHY 391 [CHN1] F. Pellegrini, Parallélisation du partitionnement de graphes, in Partitionnement de graphe, C.E. B. et Patrick Siarry, ed., Hermes-Lavoisier, 2010, pp. 107–144. [CHN2] F. Pellegrini, Placement statique de graphes de processus, in Partitionnement de graphe, C.-E. B. et Patrick Siarry, ed., Hermes-Lavoisier, 2010, pp. 145–168. Invited conference talks (national) [IN1] F. Pellegrini, Défis actuels pour le partitionnement parallèle de très grands graphes, in 7ème Journée Scientifique "Polyèdres et Optimisation Combinatoire", 2010. [IN2] F. Pellegrini, Les défis actuels pour le partitionnement parallèle de graphes, in Atelier “Solveurs de systèmes linéaires de grande taille : les avancées récentes”, 2010. [IN3] F. Pellegrini, Interopérabilité, formats ouverts et logiciels libres, in Journées Réseau Enseignement Supérieur et Recherche 2011, 2011. Conferences with published proceedings (international) [CI1] R. Abdelkhalek, H. Calandra, O. Coulaud, G. Latu, and J. Roman, Fdtd based seismic modeling and reverse time migration on a gpu cluster, in 9th International Conference on Mathematical and Numerical Aspects of Waves Propagation - Waves 2009, 2009. [CI2] R. Abdelkhalek, H. Calendra, O. Coulaud, G. Latu, and J. Roman, Fast seismic modeling and reverse time migration on a gpu cluster, in The 2009 High Performance Computing & Simulation - HPCS’09, 2009. [CI3] E. Agullo, C. Augonnet, J. Dongarra, M. Faverge, J. Langou, H. Ltaief, and S. Tomov, Lu factorization for accelerator-based systems, in 9th ACS/IEEE International Conference on Computer Systems and Applications (AICCSA 11), 2011. [CI4] E. Agullo, C. Augonnet, J. Dongarra, M. Faverge, H. Ltaief, S. Thibault, and S. Tomov, Qr factorization on a multicore node enhanced with multiple gpu accelerators, in 25th IEEE International Parallel & Distributed Processing Symposium, 2011. [CI5] E. Agullo, C. Augonnet, J. Dongarra, H. Ltaief, R. Namyst, J. Roman, S. Thibault, and S. Tomov, Dynamically scheduled cholesky factorization on multicore architectures with gpu accelerators., in Symposium on Application Accelerators in High Performance Computing (SAAHPC), 2010. [CI6] E. Agullo, H. Bouwmeester, J. Dongarra, J. Kurzak, J. Langou, and L. Rosenberg, Towards an efficient tile matrix inversion of symmetric positive definite matrices on multicore architectures, in 9th International Meeting on High Performance Computing for Computational Science (VecPar’10), 2010. [CI7] E. Agullo, C. Coti, J. Dongarra, T. Herault, and J. Langou, Qr factorization of tall and skinny matrices in a grid computing environment, in 24th IEEE International Parallel and Distributed Processing Symposium (IPDPS 2010), 2010. [CI8] E. Agullo, J. Dongarra, R. Nath, and S. Tomov, A fully empirical autotuned dense qr factorization for multicore architectures, in Euro-Par 2011 Parallel Processing, E. Jeannot, R. Namyst, and J. Roman, eds., vol. 6853 of Lecture Notes in Computer Science, Springer Berlin / Heidelberg, 2011, pp. 194–205. [CI9] G. Antoniu, T. Boku, C. Calvin, P. Codognet, M. Dayde, N. Emad, Y. Ishikawa, S. Matsuoka, K. Nakajima, H. Nakashima, R. Namyst, S. Petiton, T. Sakurai, and M. Sato, Towards exascale with the anr-jst japanese-french project fp3c (framework and programming for postpetascale computing), in 9th International Conference on Computer Science and Information Technologies, 2013. 392 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI10] P.-A. Arras, D. Fuin, E. Jeannot, A. Stoutchinin, and S. Thibault, List scheduling in embedded systems under memory constraints, in SBAC-PAD’2013 - 25th International Symposium on Computer Architecture and High-Performance Computing, J. Guerrero, ed., IEEE Computer Society, 2013, pp. 152–159. [CI11] O. Aumage, D. Barthou, C. Haine, and T. Meunier, Detecting simdization opportunities through static/dynamic dependence analysis, in PROPER - 6th Workshop on Productivity and Performance - 2013, 2013. [CI12] C. Augonnet, O. Aumage, N. Furmento, R. Namyst, and S. Thibault, Starpu-mpi: Task programming over clusters of machines enhanced with accelerators, in The 19th European MPI Users’ Group Meeting (EuroMPI 2012), S. B. Jesper Larsson Träff and J. Dongarra, eds., vol. 7490 of LNCS, Springer, 2012. [CI13] C. Augonnet, J. Clet-Ortega, S. Thibault, and R. Namyst, Data-aware task scheduling on multi-accelerator based platforms, in 16th International Conference on Parallel and Distributed Systems, 2010. [CI14] C. Augonnet, S. Thibault, and R. Namyst, Automatic calibration of performance models on heterogeneous multicore architectures, in 3rd Workshop on Highly Parallel Processing on a Chip (HPPC 2009), 2009. [CI15] C. Augonnet, S. Thibault, R. Namyst, and M. Nijhuis, Exploiting the cell/be architecture with the starpu unified runtime system, in SAMOS Workshop, S. Verlag, ed., LNCS, 2009. [CI16] C. Augonnet, S. Thibault, R. Namyst, and P.-A. Wacrenier, Starpu: A unified platform for task scheduling on heterogeneous multicore architectures, in Euro-Par 2009, LNCS, 2009. [CI17] S. Baghdadi, A. Größlinger, and A. Cohen, Putting automatic polyhedral compilation for gpgpu to work, in Proceedings of the 15th Workshop on Compilers for Parallel Computers (CPC’10), 2010. [CI18] E. Balland and C. Consel, Open platforms: New challenges for software engineering, in PSIEtA’10: Proceedings of the International Workshop on Programming Support Innovations for Emerging Distributed Applications, ACM Digital Library, 2010. [CI19] E. Balland, C. Consel, B. N’Kaoua, and H. Sauzeon, A case for human-driven software development, in ICSE’13: Proceedings of the 35th International Conference on Software Engineering (NIER track), 2013. [CI20] E. Balland, P.-E. Moreau, M. Van Den Brand, E. Visser, F. Duran, M. Roldan, S. Eker, K. Trygve Kalleberg, L. C. L. Kats, and R. Schevchenko, The second rewrite engines competition, in WRLA 2008: 7th International Workshop on Rewriting Logic and its Applications, 2009. [CI21] D. Barthou, G. Grosdidier, M. Kruse, O. Pène, and C. Tadonki, Qiral: A high level language for lattice qcd code generation, in Proceedings of the Fifth Workshop on Programming Language Approaches to Concurrency and Communication-cEntric Software, E. P. in Theoretical Computer Science, ed., 2012, pp. 37–43. [CI22] M. Belaoucha, D. Barthou, A. Eliche, and S.-A.-A. TOUATI, Fadalib: an open source c++ library for fuzzy array dataflow analysis, in Procedia Computer Science, 2010. [CI23] A. Beletska, D. Barthou, W. Bielecki, and A. Cohen, Computing the transitive closure of a union of affine integer tuple relations, in Combinatorial Optimization and Applications, vol. 5573, 2009. [CI24] S. Benkner, E. Bajrovic, E. Marth, M. Sandrieser, R. Namyst, and S. Thibault, Highlevel support for pipeline parallelism on many-core architectures, in Europar - International European Conference on Parallel and Distributed Computing - 2012, 2012. F.6. SATANAS 393 [CI25] S. Benkner, S. Pllana, J. Larsson Träff, P. Tsigas, A. Richards, R. Namyst, B. Bachmayer, C. Kessler, D. Moloney, and P. Sanders, The peppher approach to programmability and performance portability for heterogeneous many-core architectures, in ParCo, 2011. [CI26] V. Berten and E. Jeannot, Modeling resubmission in unreliable grids: the bottom-up approach, in Seventh International Workshop on Algorithms, Models and Tools for Parallel Computing on Heterogeneous Networks - heteroPar’09, 2009. [CI27] B. Bertran, C. Consel, W. Jouve, H. Guan, and P. Kadionik, Sip as a universal communication bus: A methodology and an experimental study, in International Conference on Communications, 2010. [CI28] B. Bertran, C. Consel, P. Kadionik, and B. Lamer, A sip-based home automation platform: An experimental study, in 13th International Conference on Intelligence in Next Generation Networks, IEEE, 2009, pp. 1–6. [CI29] F. Broquedis, O. Aumage, B. Goglin, S. Thibault, P.-A. Wacrenier, and R. Namyst, Structuring the execution of openmp applications for multicore architectures, in International Parallel and Distributed Symposium (IPDPS 2010), IEEE, ed., 2010. [CI30] F. Broquedis, J. Clet-Ortega, S. Moreaud, N. Furmento, B. Goglin, G. Mercier, S. Thibault, and R. Namyst, hwloc: a generic framework for managing hardware affinities in hpc applications, in PDP 2010 - The 18th Euromicro International Conference on Parallel, Distributed and Network-Based Computing, IEEE, ed., 2010. [CI31] F. Broquedis, N. Furmento, B. Goglin, R. Namyst, and P.-A. Wacrenier, Dynamic task and data placement over numa architectures: an openmp runtime perspective, in International Workshop on OpenMP (IWOMP), 2009. [CI32] J. Bruneau, C. Consel, M. O’Malley, W. Taha, and W. M. Hannourah, Preliminary results in virtual testing for smart buildings (poster), in MOBIQUITOUS 2010, 7th International ICST Conference on Mobile and Ubiquitous Systems: Computing, Networking and Services, 2010. [CI33] J. Bruneau, C. Consel, M. O’Malley, W. Taha, and W. M. Hannourah, Virtual testing for smart buildings, in IE 2012 - 8th International Conference on Intelligent Environments, 2012. [CI34] J. Bruneau, W. Jouve, and C. Consel, Diasim: A parameterized simulator for pervasive computing applications, in 6th International Conference on Mobile and Ubiquitous Systems: Computing, Networking and Services (Mobiquitous’09), IEEE, 2009. [CI35] É. Brunet, F. Trahay, A. Denis, and R. Namyst, A sampling-based approach for communication libraries auto-tuning, in IEEE International Conference on Cluster Computing, 2011. [CI36] D. Buntinas, B. Goglin, D. Goodell, G. Mercier, and S. Moreaud, Cache-efficient, intranode, large-message mpi communication with mpich2-nemesis, in 38th International Conference on Parallel Processing (ICPP-2009), IEEE, ed., 2009. [CI37] L.-C. Canon and E. Jeannot, Mo-greedy: an extended beam-search approach for solving a multicriteria scheduling problem on heterogeneous machines, in International Heterogeneity in Computing Workshop, 2011. [CI38] L.-C. Canon, E. Jeannot, and J. Weissman, A dynamic approach for characterizing collusion in desktop grids, in 24th IEEE International Parallel and Distributed Processing Symposium - IPDPS 2010, IEEE, 2010, pp. 1–12. [CI39] L.-C. Canon, E. Jeannot, and J. Weissman, A scheduling and certification algorithm for defeating collusion in desktop grids, in International Conference on Distributed Computing Systems, 2011. 394 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI40] L. Caroux, C. Consel, L. Dupuy, and H. Sauzéon, Verification of daily activities of elders: A simple, non-intrusive, low-cost approach, in ASSETS - The 16th International ACM SIGACCESS Conference on Computers and Accessibility, 2014. [CI41] D. Cassou, E. Balland, C. Consel, and J. Lawall, Leveraging software architectures to guide and verify the development of sense/compute/control applications, in ICSE’11: Proceedings of the 33rd International Conference on Software Engineering, ACM, 2011, pp. 431–440. [CI42] D. Cassou, B. Bertran, N. Loriant, and C. Consel, A generative programming approach to developing pervasive computing systems, in GPCE ’09: Proceedings of the 8th international conference on Generative programming and component engineering, ACM, 2009, pp. 137–146. [CI43] D. Cassou, J. Bruneau, and C. Consel, A tool suite to prototype pervasive computing applications (demo), in Proceedings of the 8th IEEE Conference on Pervasive Computing and Communications (PERCOM’10), IEEE Computer Society Press, 2010, pp. 1–3. [CI44] D. Cassou, J. Bruneau, J. Mercadal, Q. Enard, E. Balland, N. Loriant, and C. Consel, Towards a tool-based development methodology for sense/compute/control applications (poster), in SPLASH’10: Proceedings of the 1st International Conference on Systems, Programming, Languages, and Applications: Software for Humanity, ACM, 2010, pp. 1–2. [CI45] A. Charif-Rubial, D. Barthou, C. Valensi, S. Sameer, A. Malony, and W. Jalby, Mil : A language to build program analysis tools through static binary instrumentation, in Proceedings of the High Performance Computing Conference, 2013. [CI46] C. Consel, Diasuite:a paradigm-oriented software development approach (invited paper), in 20th ACM SIGPLAN workshop on Partial evaluation and program manipulation : PEPM’11, ACM, 2011, pp. 77–78. [CI47] U. Dastgeer, C. Kessler, and S. Thibault, Flexible runtime support for efficient skeleton programming on hybrid systems, in International conference on Parallel Computing (ParCo), 2011. [CI48] P. De Oliveira Castro, S. Louise, and D. Barthou, A multidimensional array slicing dsl for stream programming, in International IEEE Workshop on Practical Aspects of High-Level Parallel Programming, 2010. [CI49] P. De Oliveira Castro, S. Louise, and D. Barthou, Reducing memory requirements of stream programs by graph transformations, in International IEEE Conference on High Performance Computing and Simulation, 2011. [CI50] A. Denis, A high-performance superpipeline protocol for infiniband, in Euro-Par 2011, E. Jeannot, R. Namyst, and J. Roman, eds., vol. 6853 of Lecture Notes in Computer Science, Springer, 2011, pp. 276–287. [CI51] A. Denis, F. TRAHAY, and Y. Ishikawa, High performance checksum computation for faulttolerant mpi over infiniband, in the 19th European MPI Users’ Group Meeting (EuroMPI 2012), S. B. Jesper Larsson Träff and J. Dongarra, eds., vol. 7490 of LNCS, Springer, 2012. [CI52] Z. Drey and C. Consel, A visual, open-ended approach to prototyping ubiquitous computing applications, in Proceedings of the 8th IEEE Conference on Pervasive Computing and Communications (PERCOM’10), 2010. [CI53] Z. Drey, J. Mercadal, and C. Consel, A taxonomy-driven approach to visually prototyping pervasive computing applications, in 1st IFIP Working Conference on Domain-Specific Languages, vol. 5658, 2009, pp. 78–99. [CI54] O. Dubuisson, J. Gustedt, and E. Jeannot, Validating wrekavoc: A tool for heterogeneity emulation, in Heterogenity in Computing Workshop (HCW 09) in International Parallel and Distributed Processing Symposium - IPDPS 2009, D. A. Bader et al., eds., IEEE Computer Society, 2009, pp. 1–12. F.6. SATANAS 395 [CI55] A. Duchâteau, D. Padua, and D. Barthou, Hydra: Automatic algorithm exploration from linear algebra equations, in Proceedings of the IEEE Conference on Code Generation and Optimization, 2013. [CI56] F. Durán, M. Roldan, J.-C. Bach, E. Balland, M. Van Den Brand, J. R. Cordy, S. Eker, L. Engelen, M. De Jonge, K. Trygve Kalleberg, L. C. Kats, P.-E. Moreau, and E. Visser, The third rewrite engines competition, in 8th International Workshop on Rewriting Logic and its Applications - WRLA 2010, P. C. Ölveczky, ed., vol. 6381 of Lecture Notes in Computer Science, Springer-Verlag, 2010, pp. 243–261. [CI57] Q. Enard, S. Gatti, J. Bruneau, Y.-J. Moon, E. Balland, and C. Consel, Design-driven development of dependable applications: A case study in avionics, in PECCS - 3rd International Conference on Pervasive and Embedded Computing and Communication Systems, C. Benavente-Peces and J. Filipe, eds., SciTePress, 2013. [CI58] Q. Enard, C. Louberry, C. Consel, and X. Blanc, An experimental study of a design-driven, tool-based development approach, in User Evaluation for Software Engineering Researchers (USER), 2012. [CI59] Q. Enard, M. Stoicescu, E. Balland, C. Consel, L. Duchien, J.-C. Fabre, and M. Roy, Design-driven development methodology for resilient computing, in CBSE’13: Proceedings of the 16th International ACM Sigsoft Symposium on Component-Based Software Engineering, 2013. [CI60] M. Faverge and P. Ramet, A numa aware scheduler for a parallel sparse direct solver, in Workshop on Massively Multiprocessor and Multicore Computers, 2009, p. 5p. [CI61] S. Gatti, E. Balland, and C. Consel, A step-wise approach for integrating qos throughout software development, in FASE’11: Proceedings of the 14th European Conference on Fundamental Approaches to Software Engineering, vol. 6603 of Lecture Notes in Computer Science, Springer, 2011, pp. 217–231. [CI62] B. Goglin, Decoupling memory pinning from the application with overlapped on-demand pinning and mmu notifiers, in Workshop on Communication Architecture for Clusters, held in conjunction with IPDPS 2009, IEEE, ed., 2009. [CI63] B. Goglin, High throughput intra-node mpi communication with open-mx, in 17th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP2009), IEEE, ed., 2009. [CI64] B. Goglin, Nic-assisted cache-efficient receive stack for message passing over ethernet, in 15th International Euro-Par Conference, S. Verlag, ed., 2009. [CI65] B. Goglin, Managing the topology of heterogeneous cluster nodes with hardware locality (hwloc), in International Conference on High Performance Computing & Simulation (HPCS 2014), IEEE, 2014. [CI66] B. Goglin and N. Furmento, Enabling high-performance memory migration for multithreaded applications on linux, in MTAAP’09: Workshop on Multithreaded Architectures and Applications, held in conjunction with IPDPS 2009, IEEE, ed., 2009. [CI67] B. Goglin and N. Furmento, Finding a tradeoff between host interrupt load and mpi latency over ethernet, in Cluster 2009, IEEE, ed., 2009. [CI68] B. Goglin and N. Furmento, Memory migration on next-touch, in Linux Symposium, 2009. [CI69] B. Goglin, J. Hursey, and J. Squyres, netloc: Towards a comprehensive view of the hpc system topology, in Fifth International Workshop on Parallel Software Tools and Tool Infrastructures (PSTI 2014), IEEE, 2014. [CI70] B. Goglin and S. Moreaud, Dodging non-uniform i/o access in hierarchical collective operations for multicore clusters, in CASS 2011: The 1st Workshop on Communication Architecture for Scalable Systems, held in conjunction with IPDPS 2011, IEEE, ed., 2011, p. 7p. 396 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI71] A. Guermouche and H. Renard, A first step to the evaluation of simgrid in the context of a complex application, in Proceedings of the 19th Heterogeneity in Computing Workshop (HCW’2010), 2010, pp. 1–10. [CI72] B. Hadri, H. Ltaief, E. Agullo, and J. Dongarra, Tile qr factorization with parallel panel processing for multicore architectures, in 24th IEEE International Parallel and Distributed Processing Symposium (IPDPS 2010), 2010. [CI73] A.-E. Hugo, A. Guermouche, R. Namyst, and P.-A. Wacrenier, Composing multiple starpu applications over heterogeneous machines: a supervised approach, in Third International Workshop on Accelerators and Hybrid Exascale Systems, 2013. [CI74] G. Huysmans, S. Pamela, E. Van Der Plas, and P. Ramet, Non-linear mhd simulations of edge localised modes, in 36th EPS Plasma Physics Conference, 2009. [CI75] J. Jaeger and D. Barthou, Automatic efficient data layout for multithreaded stencil codes on cpus and gpus, in IEEE Proceedings of High Performance Computing conference, 2012, pp. 1–10. [CI76] H. Jakob, C. Consel, and N. Loriant, Architecturing conflict handling of pervasive computing resources, in 11th IFIP International Conference on Distributed Applications and Interoperable Systems, 2011. [CI77] H. Jakob, N. Loriant, and C. Consel, An aspect-oriented approach to securing distributed systems, in Sixth ACM International Conference on Pervasive Services, ACM, 2009, pp. 21–30. [CI78] E. Jeannot, Performance analysis and optimization of the tiled cholesky factorization on numa machines, in PAAP 2012 - IEEE International Symposium on Parallel Architectures, Algorithms and Programming, IEEE, 2012. [CI79] E. Jeannot and G. Mercier, Near-optimal placement of mpi processes on hierarchical numa architectures, in Europar, P. D’Ambra, M. R. Guarracino, and D. Talia, eds., vol. 6272 of Lecture Notes on Computer Science, Springer, 2010, pp. 199–210. [CI80] E. Jeannot, E. Meneses, G. Mercier, F. Tessier, and G. Zheng, Communication and topology-aware load balancing in charm++ with treematch, in IEEE Cluster 2013, IEEE, 2013. [CI81] W. Jouve, J. Bruneau, and C. Consel, Diasim: A parameterized simulator for pervasive computing applications, in IEEE International Conference on Pervasive Computing and Communications, 2009 (Demo), 2009. [CI82] C. Kessler, U. Dastgeer, S. Thibault, R. Namyst, A. Richards, U. Dolinsky, S. Benkner, J. Larsson Träff, and S. Pllana, Programmability and performance portability aspects of heterogeneous multi-/manycore systems, in Design, Automation and Test in Europe (DATE), 2012. [CI83] P. Koval, D. Foerster, and O. Coulaud, Fast construction of the kohn–sham response function for molecules, in Trends in nanotechnology - TNT 2009, 2009. [CI84] X. Lacoste, M. Faverge, G. Bosilca, P. Ramet, and S. Thibault, Taking advantage of hybrid systems for sparse direct solvers via task-based runtimes, in Heterogeneity in Computing Workshop, 2014. [CI85] X. Lacoste, M. Faverge, P. Ramet, S. Thibault, and G. Bosilca, Taking advantage of hybrid systems for sparse direct solvers via task-based runtimes, in HCW’2014 workshop of IPDPS, IEEE, 2014. [CI86] G. Latu, J. Roman, and F. Rozar, Achieving memory scalability in the gysela code to fit exascale constraints, in 10th International Conference on Parallel Processing and Applied Mathematics, Lecture Note in Computer Science, Springer, 2013. F.6. SATANAS 397 [CI87] P. Li, E. Brunet, and R. Namyst, High performance code generation for stencil computation on heterogeneous multi-device architectures, in HPCC-15th IEEE International Conference on High Performance Computing and Communications, IEEE Computer Society, 2013. [CI88] P. LI, E. BRUNET, and R. Namyst, High-performance code generation for stencil computations on heterogeneous multi-device architectures, in HPPC 2013 : 15th IEEE International Conference on High Performance Computing and Communications, IEEE, 2013. [CI89] T. Ma, G. Bosilca, A. Bouteiller, B. Goglin, J. Squyres, and J. Dongarra, Kernel assisted collective intra-node mpi communication among multi-core and many-core cpus, in 40th International Conference on Parallel Processing (ICPP-2011), IEEE, ed., 2011. [CI90] A. Mazouz, S.-A.-A. Touati, and D. Barthou, Study of variations of native program execution times on multi-core architectures, in International Conference on Complex, Intelligent and Software Intensive Systems (CISIS 2010), IEEE, 2010, pp. 919–924. [CI91] A. Mazouz, S.-A.-A. Touati, and D. Barthou, Analysing the variability of openmp programs performances on multicore architectures, in Fourth Workshop on Programmability Issues for Heterogeneous Multicores (MULTIPROG-2011), 2011, p. 14. [CI92] A. Mazouz, S.-A.-A. TOUATI, and D. Barthou, Performance evaluation and analysis of thread pinning strategies on multi-core platforms: Case study of spec omp applications on intel architectures, in High Performance Computing and Simulation (HPCS), IEEE, 2011, pp. 273 –279. [CI93] A. Mazouz, S.-A.-A. TOUATI, and D. Barthou, Dynamic thread pinning for phase-based openmp programs, in Euro-Par 2013 Parallel processing, F. Wolf, B. Mohr, and D. an Mey, eds., vol. 8097 of Lecture Notes in Computer Science, Springer, 2013, pp. 53–64. [CI94] G. Mercier and J. Clet-Ortega, Towards an efficient process placement policy for mpi applications in multicore environments, in Europvm/mpi 2009, M. Ropo and al., eds., vol. 5759 of Lecture Notes in Computer Science, Springer-Verlag, 2009. [CI95] G. Mercier and E. Jeannot, Improving mpi applications performance on multicore clusters with rank reordering, in EuroMPI, Springer, ed., vol. 6960, 2011, pp. 39–49. [CI96] G. Mercier, C. Pellone, and T. Maître, Experimental caracterization of the wake of a cross flow water turbine with ldv measurement, in Applications of Laser Techniques to Fluid Mechanics, 2014. [CI97] G. Mercier, F. Trahay, D. Buntinas, and E. Brunet, Newmadeleine: An efficient support for high-performance networks in mpich2, in Proceedings of the 23Rd International Parallel and Distributed Processing Symposium, 2009, p. 35. [CI98] J. Mercadal, Q. Enard, C. Consel, and N. Loriant, A domain-specific approach to architecturing error handling in pervasive computing, in OOPSLA: Conference on Object Oriented Programming Systems Languages and Applications, 2010. [CI99] S. Moreaud, B. Goglin, D. Goodell, and R. Namyst, Optimizing mpi communication within large multicore nodes with kernel assistance, in Workshop on Communication Architecture for Clusters, held in conjunction with IPDPS 2010, IEEE, ed., 2010, p. 7 p. [CI100] S. Moreaud, B. Goglin, and R. Namyst, Adaptive mpi multirail tuning for non-uniform input/output access, in The 17th European MPI Users Group conference, Springer, ed., vol. 6305 of Lecture Notes in Computer Science, 2010, pp. 239–248. [CI101] S. Moustafa, I. Dutka Malen, L. Plagne, A. Ponçot, and P. Ramet, Shared memory parallelism for 3d cartesian discrete ordinates solver, in Joint International Conference on Supercomputing in Nuclear Applications and Monte Carlo 2013, 2013. 398 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI102] T. Odajima, T. Boku, M. Sato, T. Hanawa, Y. Kodama, R. Namyst, S. Thibault, and O. Aumage, Adaptive task size control on high level programming for gpu/cpu work sharing, in The 2013 International Symposium on Advances of Distributed and Parallel Computing (ADPC 2013), 2013. [CI103] S. Ohshima, S. Katagiri, K. Nakajima, S. Thibault, and R. Namyst, Implementation of fem application on gpu with starpu, in SIAM CSE13 - SIAM Conference on Computational Science and Engineering 2013, 2013. [CI104] F. Pellegrini, Distillating knowledge about scotch, in Combinatorial Scientific Computing, U. Naumann, O. Schenk, H. D. Simon, and S. Toledo, eds., no. 09061 in Dagstuhl Seminar Proceedings, Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik, Germany, 2009. [CI105] L. Plagne, F. Hülsemann, D. Barthou, and J. Jaeger, Parallel expression template for large vectors, in Proceedings of the 8th Workshop on Parallel/High-Performance Object-Oriented Scientific, 2009. [CI106] B. Putigny, B. Goglin, and D. Barthou, Performance modeling for power consumption reduction on scc, in 4th Many-core Applications Research Community (MARC) Symposium, H. P. I. at University of Potsdam, ed., 2011. [CI107] B. Putigny, B. Goglin, and D. Barthou, A benchmark-based performance model for memorybound hpc applications, in International Conference on High Performance Computing & Simulation (HPCS 2014), IEEE, 2014. [CI108] B. Putigny, B. Ruelle, and B. Goglin, Analysis of mpi shared-memory communication performance from a cache coherence perspective, in PDSEC - The 15th IEEE International Workshop on Parallel and Distributed Scientific and Engineering Computing, held in conjunction with IPDPS, IEEE, ed., 2014. [CI109] C. Rossignon, H. Pascal, O. Aumage, and S. Thibault, A numa-aware fine grain parallelization framework for multi-core architecture, in PDSEC - 14th IEEE International Workshop on Parallel and Distributed Scientific and Engineering Computing - 2013, 2013. [CI110] E. Saillard, P. Carribault, and D. Barthou, Combining static and dynamic validation of mpi collective communication, in EuroMPI ’13 Proceedings of the 20th European MPI Users’ Group Meeting, 2013, pp. 117–122. [CI111] J. Soumagne, J. Biddiscombe, and A. Esnard, Data redistribution using one-sided transfers to in-memory hdf5 files, in Recent Advances in the Message Passing Interface, Y. Cotronis, A. Danalis, D. Nikolopoulos, and J. 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Bosilca, and H. Calandra, 3d geophysics over a runtime system on a ccnuma machine, in MATHIAS - TOTAL Symposium on Mathematics, 2013. [SI29] L. Boillot, E. Agullo, G. Bosilca, and H. Calandra, Combining recent hpc techniques for 3d geophysics acceleration, in 2nd ECCOMAS Young Investigators Conference (YIC 2013), 2013. [SI30] P. Bordat, O. Coulaud, R. Brown, and I. Baraille, Parallel tddft/dft/md code for the simulation of organic-inorganic hybrid materials, in CCP5 annual meeting 2012, 2012. [SI31] P. Bordat, O. Coulaud, R. Brown, and I. Baraille, parallel tddft/dft/md code for the simulation of organic-inorganic hybrid materials, in QUITEL 2012, 2012. [SI32] G. Bosilca, M. Faverge, X. Lacoste, I. Yamazaki, and P. Ramet, Toward a supernodal sparse direct solver over dag runtimes, in Parallel Matrix Algorithms and Applications, 2012. [SI33] A. Casadei, L. Giraud, P. Ramet, and J. 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Bosilca, Taking advantage of hybrid systems for sparse direct solvers via task-based runtimes, tech. rep., 2014. [AI37] X. Lacoste, P. Ramet, M. Faverge, Y. Ichitaro, and J. Dongarra, Sparse direct solvers with accelerators over dag runtimes, tech. rep., 2012. [AI38] M. Langlais, G. Latu, J. Roman, and P. Silan, Highly scalable parallel simulator of a hostparasite system. Open access, 2010. [AI39] G. Latu, M. Becoulet, G. Dif-Pradalier, V. Grandgirard, M. Hoelzl, G. Huysmans, X. Lacoste, E. Nardon, F. Orain, C. Passeron, P. Ramet, and A. Ratnani, Non regression testing for the jorek code, tech. rep., 2012. [AI40] P. Liu, Intégration de politiques de sécurité dans les systèmes ubiquitaires, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. [AI41] T. Ma, G. Bosilca, A. Bouteiller, B. Goglin, J. Squyres, and J. Dongarra, Kernel assisted collective intra-node communication among multicore and manycore cpus, tech. rep., 2010. [AI42] A. Mazouz, S.-A.-A. TOUATI, and D. Barthou, Measuring and analysing the variations of program execution times on multicore platforms: Case study, tech. rep., 2010. [AI43] M. Messner, B. Bramas, O. Coulaud, and E. Darve, Optimized m2l kernels for the chebyshev interpolation based fast multipole method, tech. rep., 2012. [AI44] R. Namyst, Programming heterogeneous, accelerator-based multicore machines:current situation and main challenges. 2011. [AI45] F. Pellegrini, Contributions au partitionnement de graphes parallèle multi-niveaux, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2009. [AI46] L. Stanisic, S. Thibault, A. Legrand, B. Videau, and J.-F. Méhaut, Modeling and simulation of a dynamic task-based runtime system for heterogeneous multi-core architectures, tech. rep., 2014. [AI47] F. Trahay, A. Denis, and Y. Ishikawa, A generic and high performance approach for fault tolerance in communication library, tech. rep., 2010. [AI48] C. Vuchener and A. Esnard, Dynamic load-balancing with variable number of processors based on graph repartitioning, tech. rep., 2012. Other publications (national) [AN1] E. Balland, Conception d’un langage dédié à l’analyse et la transformation de programmes, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2009. [AN2] O. Coulaud, Dynamique de systèmes d’équations non-newtoniens, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2013. 406 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [AN3] S. Fourestier, F. Pellegrini, and P. Ramet, Amélioration du comportement numérique des solveurs en prenant en compte les poids de la matrice lors de la décomposition de domaines, tech. rep., 2014. [AN4] B. Goglin, De votre boulangerie à un système d’exploitation multiprocesseur. 2011. [AN5] B. Goglin, Et plus vite si affinités... 2011. [AN6] B. Goglin, Les réseaux pour le calcul haute performance : facteur, livreur ou déménageur ? 2013. [AN7] B. Goglin, Vers des mécanismes génériques de communication et une meilleure maîtrise des affinités dans les grappes de calculateurs hiérarchiques, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2014. [AN8] B. Goglin and B. Putigny, Idée reçue: Comparer la puissance de deux ordinateurs, c’est facile ! 2013. [AN9] F. Pellegrini, Chaînes de confiance et périmètres de certification : le cas des systèmes de "vote électronique", tech. rep., 2014. [AN10] F. Pellegrini and S. Canevet, Le droit du numérique : une histoire à préserver, tech. rep., 2012. [AN11] C. Rossignon, O. Aumage, and S. Thibault, Etude de la parallélisation du produit matrice/vecteur creux sur processeurs hétérogènes. 2011. [AN12] C. Roelandt, O. Aumage, and S. Thibault, Association de modèles de programmation pour l’exploitation de clusters de gpus dans le calcul intensif. 2011. [AN13] A. Rousseau, A. Darnaud, B. Goglin, C. Acharian, C. Leininger, C. Godin, C. Holik, C. Kirchner, D. Rives, E. Darquie, E. Kerrien, F. Neyret, F. Masseglia, F. Dufour, G. Berry, G. Dowek, H. Robak, H. Xypas, I. Illina, I. Gnaedig, J. Jongwane, J. Ehrel, L. Viennot, L. Guion, L. Calderan, L. Kovacic, M. Collin, M.-A. Enard, M.-H. Comte, M. Quinson, M. Olivi, M. Giraud, M. Dorémus, M. Ogouchi, M. Droin, N. Lacaux, N. Rougier, N. Roussel, P. Guitton, P. Peterlongo, R.-M. Cornus, S. Vandermeersch, S. Maheo, S. Lefebvre, S. Boldo, T. Viéville, V. Poirel, A. Chabreuil, A. Fischer, C. Farge, C. Vadel, I. Astic, J.-P. Dumont, L. Féjoz, P. Rambert, P. Paradinas, S. De Quatrebarbes, and S. Laurent, Médiation scientifique : une facette de nos métiers de la recherche, tech. rep., 2013. [AN14] C. Vuchener, Équilibrage de charge dynamique avec un nombre variable de processeurs basé sur des méthodes de partitionnement de graphe, PhD thesis, Université Sciences et Technologies - Bordeaux I, 2014. Patents Registered software – MAQAO – StarPU: A Unified Runtime System for Heterogeneous Multicore Architectures (http://runtime.bordeaux.inria.fr/StarPU/) – hwloc: Portable Hardware Locality (http://www.open-mpi.org/projects/hwloc/) – KNEM: High-Performance Intra-Node MPI Communication – Open-MX: Myrinet Express over Generic Ethernet Hardware – DiaSuite: A suite of tools for developing applications orchestrating networked objects – DiaSuiteBox: A platform and an online store for applications orchestrating networked objects – EPSN: A Computational Steering Environment for Numerical Simulations (http://www.labri.fr/projet/epsn/) – HIPS: Hierarchical Iterative Parallel Solver (http://hips.gforge.inria.fr/) – MaPHyS: Massively Parallel Hybrid Solver – MORSE: Matrices Over Runtime Systems Exascale (http://icl.cs.utk.edu/projectsdev/morse/software/index.html) F.6. SATANAS 407 – MUMPS: A parallel sparse direct solver (http://mumps.enseeiht.fr) – PaStiX: Parallel Sparse matriX package (http://pastix.gforge.inria.fr/) – ScalFMM: Scalable Fast Multipole Method is high performance generic Fast Multipole Method (http://scalfmmpublic.gforge.inria.fr/doc/) – Scotch & PT-Scotch : Software package and libraries for sequential and parallel graph partitioning, static mapping and clustering, sequential mesh and hypergraph partitioning, and sequential and parallel sparse matrix block ordering (http://www.labri.fr/perso/pelegrin/scotch/) Other software – QIRAL: A High Level Language for Lattice QCD Code Generation – TreeMatch – ForestGOMP – Marcel – Common Communication Interface – NewMadeleine – PadicoTM – klang-omp OpenMP compiler – kastors OpenMP benchmark suite – netloc: Portable Network Locality – MONIQUA: MONitoring graphic user Interface for QM/MM Applications (http://nossi.gforge.inria.fr) – MPICPL: MPI CouPLing (http://mpicpl.gforge.inria.fr) – OPTIDIS: Large Scale Dislocation Dynamics Simulations – VITE: Visualization, Execution trace (http://vite.gforge.inria.fr) Completed PhDs – Stéphanie Moreaud, 10/2007 - 12/2011 – Jérôme Clet-Ortega, 10/2007 - 01/2012 – François Broquedis, 10/2007 - 12/2010 – Zoé Drey, 11/2006-10/2011 – François trahay, 10/2006 - 11/2009 – François trahay, 10/2006 - 11/2009 – Cédric Augonnet, 10/2008 - 12/2011 – Mathieu Faverge, 11/2006 - 12/2009 – Sylvain Henry, 10/2009 - 11/2013 – Bertrand Putigny, 11/2010 - 03/2014 – Julien Jaeger, 10/2007 - 07/2012 – Louis-Claude Canon, ? - ? – Julien Mercadal, 10/2006 - 10/2011 – Damien Cassou, 10/2007 - 03/2011 – Henner Jakob, 05/2008 - 06/2011 – Julien Bruneau, 10/2008 - 05/2012 – Hongyu Guan, 02/2009 - 06/2012 – Quentin Enard, 02/2010 - 05/2013 – Peng Fei Liu, 10/2009 - 01/2013 – Stéphanie Gatti, 02/2010 - 02/2014 – Rached Abdelkhalek, 01/2008 - 12/2013 – Mathieu Chanaud, 12/2007 - 10/2011 – Fabrice Dupros, 01/2007 - 12/2010 408 – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Jérémie Gaidamour, 10/2006 - 12/2009 Bruno Lathuilière, 11/2006 - 02/2010 Nicolas Richart, 10/2005 - 01/2010 Pablo Salas, 06/2011 - 11/2013 Jérôme Soumagne, 04/2009 - 12/2012 Clément Vuchener, 09/2010 - 02/2014 including cotutelle PhDs (international) – Alexandre Duchateau (with UIUC, USA), 10/2008 - 08/2013 including cotutelle PhDs (national) – François Diakhaté, octobre 2007 - décembre 2010 – Cyril Bordage, 10/2009 - décembre 2013 – Pablo Oliveira Castro, 10/2007 - 12/2010 – Andres Charif-Rubial, 10/2008 - 10/2012 – Abdhelhafid Mazouz, 09/2008 - 12/2012 Completed habilitations – Olivier Coulaud, 29/11/2013 – Brice Goglin, 15/04/2014 F.6.2 Visibility and attractivity Editorial and organizational activities Steering committee (international) – International Conference on Cluster Computing (Cluster), since 2011 – International European Conference on Parallel and Distributed Computing (Euro-Par), since 2011 Steering committee (national) Program committee (international) – ParCo’09 – CCGRID’09 – EuroMPI’09 – ICPADS’09 – EuroMPI’10 – HiPC’10 – HPCVirt’10 – ICCCN’10 – IWOMP’10 – CASS 2011 – EuroMPI 2011 – PMEA 2011 – A4MMC 2011 – SC’12 – ROSS 2012 – MSEPT 2012 – ISPA 2012 – CASS 2012 F.6. SATANAS – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – SC’13 PACT13 PPAM 2013 CCGRID 2013 ROSS 2013 CASS 2013 EuroPar 2014 SC14 ICPP14 ROSS14 EuroPar 2010 Smart 2010 PLDI 2011 Smart 2011 EuroPar 2012 Smart 2012 UCHPC 2012 EuroPar 2013 IPDPS 2013 PROPER 2013 UCHPC 2013 HeteroPar 2014 HiPC 2014 ISPAN’11 EuroMPI’11 SC’12 HIPC’13 HotI’13 EuroMPI’13 Cluster’14 HotI’14 HiPC’14 CARLA’14 EuroMPI/ASIA’14 ICCCN’14 HiPC’14 HPCVirt’9 HPCVirt’10 HPCVirt’11 EuroPar 2011 EuroPar 2013 IPDPS13 IPDPS14 MuCoCos13 MuCoCos14 EuroMPI 2012 EuroMPI 2013 409 410 – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS EuroMPI 2014 CCGrid 2011 CCGrid 2012 HiPC 2010 P2S2 2009 P2S2 2010 HPIDC 2009 ICPADS 2012 IPTCOMM 2009 GPCE 2009 IMCT 2009 NFM 2009 SLE 2009 GPCE 2010 ICMT 2010 GTTSE 2010 NFM 2010 SLE 2010 PEPM 2011 ICWS 2011 CyPhy 2011 ICSE 2012 ICWS 2012 ICSE 2013 ICAC 2013 ICSE 2014 40 Years of Nested Dissection IPDPS’10 IPDPS’11 IPDPS’12 IPDPS’13 IPDPS’14 EuroMPI 2013 CCGRID 2013 Heteropar 2013 PPAM 2013 SPA 2012 HPDC 2012 PDGC 2012 HiPC 2012 Heteropar 2012 Cluster 2011 CSE 2010) CLUSTER 2010 PARENG’09 PDSEC’09 SC’09 F.6. SATANAS – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – – PRECOND’09 EuroMicroPDP’09 PARCO’09 WAVES’09 VECPAR’10 HiPC 2010 PDSEC’10 PMAA’10 EuroMicroPDP’10 SC’11 PDSEC’11 PDCN’11 EuroMicroPDP’11 SC’12 PDSEC’12 VECPAR’12 EuroMicroPDP’12 HiPC 2013 PRECOND’13 IPDPS’13 PARENG’13 PDCN’13 PDSEC’13 ICPP’13 EuroMicroPDP’13 CCGRID 2014 IPDPS’14 EuroMicroPDP’14 DD21 HiPC 2014 ICS’14 PDCN’14 PDSCE’14 VECPAR’14 Program committee (national) – CFSE 2009 – Renpar 2009 – Renpar 2011 – Realis 2013 – RenPar’13 – Renpar 20 – Renpar 21 – Realis-01 Presidence of program committee (international) – Chair of Topic Multicore and Manycode Programming for the EuroPar 2014 conference – Chair of Topic High-Performance Networks and Communications for the EuroPar 2014 conference 411 412 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – Chair of Topic High Performance Architectures and Compilers for the EuroPar 2013 conference – Chair of Technical Program Committee “Architecture and Networks” for the SuperComputing 2011 conference – Chair of Technical Program Committee of the Twelfth International Workshop on Algorithms, Models and Tools for Parallel Computing on Heterogeneous Platforms, 2014 – Co-Program Chair of IEEE International Conference on Computational Science and Engineering, 2010 – Local Chair of the topic High Performance and Scientific Applications for the EuroPar 2011 conference – Local Chair of the topic Parallel Numerical Algorithms for the EuroPar 2011 conference – Co-Chair of the topic Applications for the Supercomputing 2011 conference Presidence of program committee (national) Organizing committee (conferences, seminaries, schools...) (international) – HPC-GA Workshop 2013 – PRACE PATC Training Session on Runtime Systems for Heterogeneous Platform Programming with Maison de la Simulation, 2013 – CEMRACS’2010, Numerical Modeling for Fusion, Marseille France, 2010 – CEMRACS’2012, Numerical Methods and Algorithms for High Performance Computing, Marseille France, 2012 – PRACE PATC Training Session on Parallel Linear Algebra with Maison de la Simulation, 2013 – PRACE Summer School, CINECA Italia, 2013 Organizing committee (conferences, seminaries, schools...) (national) Presidence of organizing committee (international) – Organization of the 2011 edition of the EuroPar international conference – Organization of the 2013 CEA-EDF-Inria computer science school on Programming Heterogeneous Parallel Architectures – Co-Organization of the 2009 CEA-EDF-Inria scientific school ( Robust methods and algorithms for solving large algebraic systems on modern high performance computing systems) – Co-Organization of the 2011 CEA-EDF-Inria scientific school (Toward petaflop numerical simulation on parallel hybrid architectures) Presidence of organizing committee (national) Journal editorial board (international) – International Journal of Parallel, Emergent and Distributed Systems – SIAM Journal on Matrix Analysis and Applications (SIMAX) Journal editorial board (national) Research animation (international) Research animation (national) Service as expert or evaluator Presidence of expert committee (international) Presidence of expert committee (national) – Chair of the ANR (National Agency for Research) “Numerical Modeling” evaluation committee, 2011-2013 – Chair of the Project Committee of Inria Bordeaux - Sud-Ouest, 2009-2011 Membership in expert committee (international) – Contributor to the ETP4HPC Strategic Research Agenda, 2013 F.6. SATANAS 413 – STIC-AmSud evaluation committee, 2010 – EESI Working Group 4.3 (Numerical Libraries, Solvers and Algorithms), 2011 – EESI-2 Working Groups 4.1 (Numerical Libraries, Solvers and Algorithms) and 4.3 (Resilience), 2013-2015 – Expert for the Dutch FWO programme, 2012 – Expert for the Italian VQR 2004-2010 programme, 2012 – Expert for PRACE programme, 2013-2014 – Member of the Board of ETP4HPC (European Technology Platform for High Performance Computing), 2013 – Member of ETP4HPC Working Group for Centres of Excellence, 2013 – Israel Science Foundation, 2014 Membership in expert committee (national) – CNRS INS2I PES 2014 – ANR Cosinus scientific evaluation committee, 2008-2010 – AERES evaluation of LIP6 laboratory, 2013 – ANR Cosinus scientific evaluation committee, 2010 – ANR MN scientific evaluation committee, 2011-2013 – C3I GENCI scientific evaluation committee, 2011-2013 – GENCI user scientific committee (Mathematics and Computer Sciences), 2011 – Member of DAS-SCI (Domaine d’Activité technologiques Stratégiques - Systèmes complexes, Conception, architecture et Intégration) of Aerospace Valley cluster of competitiveness, 2013 – Member of the Research Direction of Inria (Deputy Scientific Director of the Inria research domain entitled Applied Mathematics, Computation and Simulation), 2012 – Member of the National Evaluation Committee of Inria, 2009-2011 – Member of the Strategic Comity for Intensive Computation of the French Research Ministry, 2009-2013 – Member of the Scientific Board of CEA/DAM, 2009– Member of the Scientific Board of Maison de la Simulation, 2009– Member of the French Information Group for PRACE, 2009– Member of the Technical Group of GENCI, 2009Individual expert (reviewer) (international) – Evaluator for University of Mons, Call for Collaborative Projects ARC 2014 – ANR International White Program, Call for Collaborative Projects 2009 – Evaluator for Cofecub projects (French-Brazil cooperation) 2010 – Evaluator for NSF Projects in 2010: G8 Exascale – Evaluator for NSF Projects in 2012: Strategic Technologies for Cyberinfrastructure Program – Journal paper review for JPDC – Journal paper review for TPDS – Journal paper review for CCPE – Accompanying commity for Sébastien Frémal PhD, Mons, Belgium – Mid-PhD defense opponent, Uppsala, Sweden – Contributor to the EESI (European Exascale Software Initiative) expert group, 2011 – Member of an international expert panel in charge of auditing the ICT sector in Chad, 2013 – Journal paper review for Applied Numerical Mathematics – Journal paper review for BIT Numerical Mathematics – Journal paper review for Computer Physics Communications – Journal paper review for Concurrency and Computation: Practice and Experience – Journal paper review for Journal of Computational and Applied Mathematics 414 – – – – – – – – – – – – – – Journal Journal Journal Journal Journal Journal Journal Journal Journal Journal Journal Journal Journal Journal APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS paper paper paper paper paper paper paper paper paper paper paper paper paper paper review review review review review review review review review review review review review review for for for for for for for for for for for for for for Numerical Linear Algebra with Applications Neural Processing Letters Parallel Computing Computers and Fluids Geophysical Prospecting IEEE Trans. on Parallel and Distributed Systems International Journal for Numerical Methods in Fluids SIAM J. Scient. Comp. SIAM J. Numer. Analysis ACM Trans. on Mathematical Software Journal of Engineering Mathematics SIAM J. Matrix Analysis and Applications Journal of Computational Physics Advances in Computational Mathematics Presidence of selection board – President of committee in charge of recruiting a Professor, Enseirb, Bordeaux, 2009 – President of committee in charge of recruiting a Professor, Enseirb, Bordeaux, 2010 – President of committee in charge of recruiting a Professor, Enseirb, Bordeaux, 2012 Membership in selection board – President of committee in charge of recruiting a lecturer, UJF, Grenoble, 2010 – President of committee in charge of recruiting a lecturer, ENSEEIHT, Toulouse, 2009 – President of committee in charge of recruiting a lecturer, UJF, Grenoble, 2013 – Committee in charge of recruiting a Software Development Engineer, Inria Grenoble, 2010 – Committee in charge of recruiting a Software Development Engineer, Inria Lille, 2012 – Committee in charge of recruiting a Financial Affair Engineer, Inria Lille, 2011 – Committee in charge of recruiting a Communication Assistant, Inria Bordeaux, 2011 – Committee in charge of recruiting a Innovation and Collaboration Assistant, Inria Bordeaux, 2012 – Committee in charge of recruiting a System and Network Administrator, Inria Bordeaux, 2013 – Committee in charge of recruiting a System Administrator, Inria Bordeaux, 2012 – Committee in charge of recruiting a lecturer, UVSQ, Versailles, 2011 – Committee in charge of recruiting a professor, U. Bordeaux, 2011 – Committee in charge of recruiting a professor, UVSQ, 2012 – Committee in charge of recruiting a professor, IPB, 2013 – Committee in charge of recruiting a professor, IPB, 2012 – Inria Young Researchers Selection Board (postdocs, PhDs) 2010-2014 – Committee in charge of recruiting a lecturer, INRIA-IPB, Bordeaux, 2009 – Vice-President of committee in charge of recruiting a lecturer, IPB, Bordeaux, 2010 – Committee in charge of recruiting a lecturer, UPS, Toulouse, 2011 – Committee in charge of recruiting an assistant professor, Inria-Univ. Bordeaux research chair, 2009 – Committee in charge of recruiting an assistant professor, Inria-Univ. Pau research chair, 2010 – Committee in charge of recruiting a professor, Univ. Pau, 2013 – Committee in charge of recruiting an assistant professor, IPB, 2012 – National Committee in charge of recruiting Inria young graduate scientists (CR1), 2009-2011 – National Committee in charge of recruiting Inria senior researchers (DR2), 2009-2011 – National Committee in charge of career advancement (CR2-CR1, DR2-DR1, DR1-DR0), 2009-2011 – National Committee in charge of recruiting Inria research position scientists, 2012 & 2014 F.6. SATANAS – National Committee in charge of Inria PES, 2010 & 2013 Membership in prize jury – Reviewer of a candidate for Prix Paul Caseau, EDF, 2014 Reviewing of PhD or habilitation (international) – Jesper Andersen, 2010 – Dima Aladidi, 2010 – Bas Fagginger Auer, PhD, U. Utercht, Netherlands, 2013 – Alessio Merlo (University of Genoa, Italy), 2010 – Robbert Higgins (University College Dublin, Ireland), 2011 – Jan-Christian Meyer (NTNU, Trondhiem, Norway), 2012 – Sidi Mahmoudi (Univeristé de Mons, Belgium), 2013 Reviewing of PhD or habilitation (national) – Patrice Kadionik, 2012 – Thierry Monteil, 2010 – Laercio Pilla Lima, 2014 – Simplice Donfack, 2012 – Marcio Bastos Castro, 2012 – Vincent Pichon, 2012 – Marc Palyart, 2012 – Christiane Pousa, 2011 – Swann Perarnau, 2011 – Everton Hermann, 2011 – Camille Coti, 2009 – Brice Videau, 2009 – Sylvain Didelot, 2014 – Amira Mensi, 2013 – Yuri Kachnikov, 2013 – Guillaume Rizk, 2013 – Junjie Lai, 2013 – Wilfried Kirschenmann, 2012 – Samir Ammenouche, 2011 – Caroline Lu, 2009 – Tien Dung Cao – Adrienne Tankeu – Manzoor Ahmad, 2013 – Elmehdi, 2013 – Miruna Stoicescu, 2013 – Arnad Sihha – Matthieu Lefebvre, 2012 – Tram Truong Huu, 2010 – Alexandru Dobilla, 2011 – David Guibert, 2009 – Mikolaj Szyldlarski, 2010 – Thomas Dufaud, 2011 – Mathias Jacquelin, 2011 – Joseph Charles, 2012 415 416 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – Sébastien Duminil, 2012 – Claude Obrecht, 2012 – Mathias Malandin, 2013 – Désiré Nuentsa Wakam, 2014 – Laura Grigori, 2009 – Roland Martin, 2009 – Claude Tadonki, 2013 Membership of PhD/habilitation committee (international) Membership of PhD/habilitation committee (national) – Christian Perez, 2006 – Andres Charif Rubial, 2012 – Souad Koliaï, 2011 – Fabrice Dupros, 2010 – Nicolas Richart, 2010 – Wilfrid Jouve, 2009 – Ludovic Hablot, 2009 – Hazem Fkaier, 2009 – Stephane Zuckermann, 2010 – Jose Noudohouenou, 2013 – Jean-Marc Gratien, 2013 – Vincent Boulos, 2012 – François-Henry Rouet, 2012 – Cédric Lachat, 2013 – Cyril Bordage, 2013 – Clément Vuchener, 2014 – Benjamin Depardon, 2010 – Mohamed Slim Bouguerra, 2011 – Cristian Klein, 2012 – Remi Sharrock, 2010 – Benjamin Depardon, 2010 – François Trahay, 2009 – Cédric Augonnet, 2011 – Stéphane Jauré, 2012 – Sébastien Fourestier, 2013 – Sylvain Henry, 2013 – Benoit Lizé, 2014 – Florent Ventimiglia, 2014 – Nathalie Raveu, 2012 – Brice Goglin, 2014 F.6. SATANAS 417 Scientific collaborations Projects (international) – EU FP7 PEPPHER Project, 2010-2012 – EU FP7 HPC-GA Project, 2012-2014 – EU FP7 MONT-BLANC 2 Project, 2013-2016 – ANR-JST FP3C Project, 2010-2012 – Bilateral Japan-French “Sakura” Projet with University of Tokyo, 2009-2010 – Bilateral Japan-Portugal “Pessoa” Projet with University of Lisbon and University of Évora, 2009-2010 – STIC-AmSud SEHLOC Project, 2013-2014 – CNRS-JST NEGST Project, 2006-2009 – Biomasud Project, 2011-2013 – EU FP7 PEPPHER Project, 2010-2012 – EU FP7 HPC-GA Project, 2012-2014 – EU FP7 MONT-BLANC 2 Project, 2013-2016 – ANR-JST FP3C Project, 2010-2012 – EU FP7 EESI Project, 2012 – EU FP7 Marie-Curie ITN MyPlanet Project, 2008-2012 – EU FP7 STREP EXA2CT Project, 2013-2016 – EU FP7 PRACE 3IP PCP-WP8, 2012-2016 – France-Berkeley Fund, 2010-2012 – G8-ECS (Enabling Climate Simulation at extreme scale) Project with Univ. Illinois at Urbanna Champaign, Univ. Tennessee at Knoxville, German Research School for Simulation Sciences, Univ. Victoria, Titech, Univ. Tsukuba, NCAR, Barcelona Supercomputing Center, 2011-2014 – HOSCAR (High performance cOmputing and SCientific dAta management dRiven by highly demanding applications) French-Brazilian Project (Inria & CNPq), 2012 Projects (national) – ProHMPT, ANR COSINUS, 2009-2012 – COOP, ANR COSINUS, 2010-2013 – MediaGPU, ANR ContInt, 2010-2012 – SONGS, ANR Infra, 2012-2015 – LEGO, ANR CIGC, 2006-2009 – MOEBUS, ANR INFRA, 2014-2017 – FLFS, ANR Blanc, 2008-2010 – FUI, SmartImmo, 2010-2011 – PETAL, ANR COSINUS, 2009 - 2010 – PETALh, ANR COSINUS, 2011 - 2012 – SOLSTICE, ANR CIS, 2006-2010 – NOSSI, ANR CIS, 2008-2010 – RESCUE, ANR Blanc, 2010-2014 – OPTIDIS, ANR COSINUS, 2010-2014 – BOOST, ANR Blanc, 2010-2014 – SONGS, ANR INFRA, 2011-2015 – ANEMOS, ANR MN, 2012-2016 – SOLHAR, ANR MONU, 2013-2017 – PLAFRIM, National Experimental Parallel Computing Platform, 2009 - 418 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS – CRA-HPC, Innovative Simulation Methods for Large Scale Numerical Prototypes on Emerging Architecture Computers (Regional Council), 2013-2015 – C2S@Exa, Inria Project Lab involving 11 Project-Teams, 2013-2015 Joint publications (international) – University of Vienna, Austria – University of Tsukuba, Japan – University of Tokyo, Japan – University of Tennessee-Knoxville, USA – University of Linköping, Sweden – University of Wisconsin-La Crosse, USA – Argonne National Laboratory, USA – Cisco Systems, USA – University of Illinois, Urbana-Champaign, USA – University of Oregon, USA – University of Copenhagen, Denmark – University of Halmstad, Sweden – Rice University, USA – University of Minnesota, USA – University of California, Berkeley, USA – Ohio State University, USA – ETH Zurich, Switzerland – Nagoya University, Japan – Stanford University, USA Joint publications (national) – University of Grenoble, France – University of Versailles Saint Quentin, France – Exascale Computing Research Laboratory, France – University of Orsay, France – Mines ParisTech, Fontainebleau, France – Inria Grenoble - Rhône-Alpes, France – Total Pau, France – Inria Lille, France – LAAS, Toulouse, France – CERFACS, Toulouse, France – CPMOH, Bordeaux, France – I3M, Montpellier, France – Laplace, Toulouse, France Other collaborations (international) – MORSE, Inria Associate team with University of Tennessee-Knoxville (ICL), University of Colorado-Denver (Dept. of Maths. and Stat. Sciences), 2011-2013 – MPI-Runtime, Inria Associate team with Argonne National Laboratory, USA, 2008-2010 – OPALI, Inria Associate team with University of Montréal, Québec, Canada, 2012– FASTLA, Inria Associate team with Stanford University (Institute for Computational and Mathematical Engineering) and Lawrence Berkeley National Laboratory (Scientific Computing Group), 2012-2014 Other collaborations (national) Research visitors (international) F.6. SATANAS – – – – – – – 419 Tetsuya Odajima, university of Tsukuba, Japan, 2011, two weeks Tim Sheard, university of Oregon,USA, 2012, three months George Bosilca, University of Tennessee at Knoxville, 2013, one year Eric Darve, Stanford University, 2012, three weeks Hatem Ltaief, KAUST University, 2011, one week Yousef Saad, University of Minnesota, 2012, two weeks Ichitaro Yamazaki, Lawrence Berkeley National Laboratory, 2011, two weeks Research visitors (national) Research visits (international) – Olivier Aumage, UFRGS, Porto Alegre, Brazil, 2012, one month – Charles Consel, McGill University, Montréal, Québec – Canada, 2012, eleven months Research visits (national) F.6.3 Involvement with social, economic and cultural actors Collaborations with the industry Industrial contracts – Samsung GRO SAIT 2012-2013 – Total 2012-2015 – Total 2011 – CEA/DAM, 2013 – EDF R&D, 2011 – Trois bourses CIFRE Thales, 2009-2012 – Bouygues, 2011-2011 – CEA/DAM, 2008-2010 – EDF R&D, 2007-2009 – TOTAL, 2008-2010 – TOTAL, 2010-2013 – TOTAL, 2011-2014 – AIRBUS, 2013-2016 – CEA Cadarache, 2012-2015 – EDF R&D, 2012-2015 Contributions to professional journals and overview publications Reports for decision makers – Hearing by the S&D Group on ACTA, European Parliament, 2012 – Hearing by the Sénat rapporteurs on e-voting, Sénat, 2014 Contributions to standards – Message Passing Interface 3.0, 2012 Collaborations outside of universities Start-ups – HPC-PME initiative, collaboration with ALGO’TECH INFORMATIQUE using a PhD-consultant action, 2014 420 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS General audience actions Learned society, federation (international) Learned society, federation (national) Scientific popularization, dissemination of scientific culture – Teaching and Practice sessions to help secondary school teachers of Bordeaux Academia to start Computer Science courses, 2014 – In charge of science popularization for Inria Bordeaux research centre, 2010-2014 – Presenting computer science research during “Fete de la Science”, 2011-2013 – Presenting computer science research and careers at Aquitec student exhibition, 2010-2014 – Invited Teacher for the European COST Complex HPC School, 2013 Publications for large audience – Article about Super-computers: at the frontiers of extreme computing, published in wide audience national monthly magazine “La Recherche”, november 2011 – 4 articles about High Performance Computing (multiprocessing systems, hardware affinities, computing power, and networking) in the online magazine “Interstices”, 2011 and 2013 – Scientific consultant for CEA/DAM, 2007-2014 – Scientific consultant for Exascale Computing Research Laboratory, 2009-2014 F.7. CROSS-TEAM PUBLICATIONS F.7 421 Cross-team publications We list in this section all the croos-team publications. Every such publication is also listed in the corresponding team sections. The following table gives the number of cross-team publications per team. CA I&S Mabiovis MeF Progress Satanas F.7.1 CA 3 9 14 1 1 I&S 3 17 7 4 1 Mabiovis 9 17 13 MeF 14 7 13 14 Progress 1 4 Satanas 1 1 14 3 3 - Scientific production Publications Peer-reviewed journals (international) [RI1] J. Allali, P. Ferraro, P. Hanna, C. Iliopoulos, and M. Robine, Toward a general framework for polyphonic comparison, Fundamenta Informaticae, 97 (2009), pp. 331–346. [RI2] D. Cao, R. Castanet, P. Felix, and K. Chiew, An approach to automated runtime verification for timed systems: Applications to web services, JOURNAL OF SOFTWARE„ 7 (2014), pp. 1338–1350. [RI3] B. Courcelle, C. Gavoille, and M. M. Kanté, Compact labelings for efficient first-order modelchecking, Journal of Combinatorial Optimization, 21 (2011), pp. 19–46. [RI4] B. Derbel, M. Mosbah, and A. Zemmari, Sublinear fully distributed partition with applications, Theory of Computing Systems, 47 (2010), pp. 368–404. [RI5] E. Garnaud, S. Maabout, and M. Mosbah, Les dépendances fonctionnelles pour la sélection de vues dans les cubes de données, Journal of Decision Systems, 21 (2012), pp. 71–91. [RI6] E. Garnaud, S. Maabout, and M. Mosbah, Functional dependencies are helpful for partial materialization of data cubes, Annals of Mathematics and Artificial Intelligence, (2013), pp. 1–30. [RI7] K. Gerdes, L. Clémént, and R. Marlet, A grammar correction algorithm, Lecture notes in computer science, 5591 (2011), pp. 47–63. [RI8] N. Ouled Abdallah, H. Hadj Kacem, M. Mosbah, and A. Zemmari, Randomized broadcasting in wireless mobile sensor networks, Concurrency and Computation: Practice and Experience, 25 (2013), pp. 203–217. [RI9] F. Queyroi, M. Delest, J.-M. Fédou, and G. Melançon, Assessing the quality of multilevel graph clustering, Data Mining and Knowledge Discovery, 28 (2014), pp. 1107–1128. [RI10] D. Renault and J.-F. Marckert, Compact convex sets of the plane and probability theory, ESAIM: Probability and Statistics, (2014), p. 34. Chapters in contributed volumes (international) [CHI1] J. Allali, P. Ferraro, P. Hanna, and M. Robine, Polyphonic alignment algorithms for symbolic music retrieval, in Auditory Display, S. Ystad, M. Aramaki, R. Kronland-Martinet, and K. Jensen, eds., Springer Verlag Berlin, 2010, pp. 466–482. 422 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CHI2] A. Ben Zakour, S. Maabout, M. Mosbah, and M. Sistiaga, Relaxing time granularity for mining frequent sequences, in Advances in Knowledge Discovery and Management, F. G. B. P. . G. V. . D. A. Zighed, ed., Springer International Publishing, 2014, pp. 53–76. [CHI3] P. Ferraro, M. Robine, J. Allali, P. Hanna, and R. Thomas, Detection of near-duplicate musical documents from a multi-level comparison of tonal information, in Information Extraction from the Internet, iconcept press, 2011, pp. 129–143. Conferences with published proceedings (international) [CI1] S. Abbas, M. Mosbah, and A. Zemmari, A generic distributed algorithm for computing by random mobile agents, in Proceedings PRIMA, vol. 5044 of Lecture Notes in Artificial Intelligence, Springer, 2009, pp. 392–397. [CI2] C. Aguerre, T. Morsellino, and M. Mosbah, Debugging the execution of distributed algorithms over anonymous networks, in Proceedings of the International Conference on Information Visualisation, 2012, pp. 464–470. [CI3] C. Aguerre, T. Morsellino, and M. Mosbah, Fully-distributed debugging and visualization of distributed systems in anonymous networks, in Proceedings of the International Conference on Information Visualization Theory and Applications, R. S. L. P. Richard, M. Kraus and J. Braz, eds., INSTICC, 2012, pp. 764–767. [CI4] M. Barjon, A. Casteigts, S. Chaumette, C. Johnen, and Y. M. Neggaz, Un algorithme de test pour la connexité temporelle des graphes dynamiques de faible densité, in ALGOTEL 2014 – 16èmes Rencontres Francophones sur les Aspects Algorithmiques des Télécommunications, 2014, pp. 1–4. [CI5] W. Ben Jaballah, M. Mosbah, H. Youssef, and A. Zemmari, Lightweight source authentication mechanisms for group communications in wireless sensor networks, in IEEE 27th International Conference on Advanced Information Networking and Applications (AINA), IEEE, 2013, pp. 598–605. [CI6] M. Ben Mbarka, F. Krief, and O. Ly, Entrusting remote software executed in an untrusted computation helper, in International Conference on Network and Service Security, 2009, 2009, pp. 1–5. [CI7] M. Ben Mbarka, F. Krief, and O. Ly, Modeling long-term signature validation for resolution of dispute, in Theory of Security and Applications Lecture Notes in Computer Science Volume 6993, 2012, vol. 6993, 2012, pp. 78–97. [CI8] A. Benzakour, S. Maabout, M. Mosbah, and M. Sistiaga, Time constraints extension on frequent sequential patterns, in Proceedings of KDIR conference, SciTePress, ed., 2010, pp. 281–287. [CI9] A. Benzakour, S. Maabout, M. Mosbah, and M. Sistiaga, Uncertainty interval temporal sequences extraction, in Proceedings of the 6th Int. Conf. on Information Systems, Technology and Management (ICISTM), no. 285 in Com. Comp. Info. Science (CCIS), Springer, 2012, pp. 259–270. [CI10] F. Berthaut, D. Janin, and M. Desainte-Catherine, libtuile : un moteur d’exécution multiéchelle de processus musicaux hiérarchisés, in Actes des Journées d’Informatique Musicale (JIM), 2013, pp. 45–50. [CI11] H. Boujut, J. Benois-Pineau, T. Ahmed, O. Hadar, and P. Bonnet, A metric for no-reference video quality assessment for hd tv delivery based on saliency maps, in Multimedia and Expo (ICME), 2011 IEEE International Conference on, IEEE, 2011, pp. 1–5, 1945–7871. [CI12] H. Boujut, J. Benois-Pineau, T. Ahmed, O. Hadar, and P. Bonnet, No-reference video quality assessment of h.264 video streams based on semantic saliency maps, in Image Quality and System Performance IX, vol. 8293, 2012, pp. 8293–28. [CI13] H. Boujut, J. Benois-Pineau, O. Hadar, T. Ahmed, and P. Bonnet, Weighted-mse based on saliency map for assessing video quality of h.264 video streams, in Image Quality and System Performance VIII, vol. 7867, 2011, p. 78670X. F.7. CROSS-TEAM PUBLICATIONS 423 [CI14] D. Cao, R. Castanet, and P. Félix, An automated passive testing approach of real-time systems: Application to web services, in IEEE Asia-Pacific Services Computing Conference APSCC 2011, 2014, pp. 78–85. [CI15] D. Cao, R. Castanet, P. Félix, and G. Morales, Testing of web services: Tools and experiences, in IEEE Asia-Pacific Services Computing Conference APSCC 2011, 2014, pp. 82–88. [CI16] D. Cao, P. Felix, R. Castanet, and I. Berrada, Testing service composition using tgse tool, in The proceedings of SERVICES 2009 (Part I), I. C. S. Press, ed., IEEE Computer Society Press., 2009. [CI17] D. Cao, P. Félix, and R. Castanet, Wsoft : an automatic testing tool for web services composition, in 5th International Conference on Internet and Web Applications and Services, 2014, pp. 7–12. [CI18] D. Cao, P. Félix, R. Castanet, and I. Berrada, Online testing framework for web services, in IEEE 3rd International Conference on Software Testing Verification and Validation, 2014, pp. 363–372. [CI19] D. Cao, P. Félix, R. Castanet, and I. Berrada, Testing web services composition using the tgse tool, in WS-Testing 2009, 2014, pp. 187–194. [CI20] T.-D. Cao, T.-T. Phan-Quang, P. Félix, and R. Castanet, Automated runtime verification for web services, in IEEE international Conference on Web Services, 2014, pp. 76–82. [CI21] D. Cassou, E. Balland, C. Consel, and J. Lawall, Leveraging software architectures to guide and verify the development of sense/compute/control applications, in ICSE’11: Proceedings of the 33rd International Conference on Software Engineering, ACM, 2011, pp. 431–440. [CI22] I. Chahid, S. Maabout, L. Martin, and M. Mosbah, Simplification de données de vol pour un stockage optimal et une visualisation accélérée, in Actes de la 10ème Conférence Internationale Francophone sur l’Extraction et la Gestion de Connaissance, RNTI (Revue des Nouvelles Technologies de l’Information), Cepadeues, 2010, pp. 393–398. [CI23] L. Clément, K. Gerdes, and R. Marlet, Grammaires d’erreur – correction grammaticale avec analyse profonde et proposition de corrections minimales, in 16e conférence sur le Traitement Automatique des Langues Naturelles (TALN 2009), 2009. [CI24] L. Clément, K. Gerdes, and R. Marlet, A grammar correction algorithm – deep parsing and minimal corrections for a grammar checker, in 14th conference on Formal Grammar (FG 2009), 2009. [CI25] Q. Enard, C. Louberry, C. Consel, and X. Blanc, An experimental study of a design-driven, tool-based development approach, in User Evaluation for Software Engineering Researchers (USER), 2012. [CI26] P. Ferraro, J. Allali, P. Hanna, and M. Robine, Extending alignment algorithm for polyphonic comparison, in Proceedings of the International Computer Music Modeling and Retrieval Conference, 2009, pp. 206–209. [CI27] P. Ferraro, P. Hanna, L. Imbert, and T. Izard, Accelerating query-by-humming on gpu, in Proceedings of the 10th International Society for Music Information Retrieval Conference, 2009. [CI28] P. Ferraro, P. Hanna, L. Imbert, and T. Izard, Accelerating query-by-humming on gpu, in 10th International Society for Music Information Retrieval Conference, 2009, pp. 279–284. [CI29] D. Fourer, M. Guerry, T. Shochi, J.-L. Rouas, J.-J. Aucouturier, and A. Rilliard, Analyse prosodique des affects sociaux dans l’interaction face à face en japonais, in XXXèmes Journées d’études sur la parole, 2014. [CI30] D. Fourer, T. Shochi, J.-L. Rouas, J.-J. Aucouturier, and M. Guerry, Going ba-na-nas: Prosodic analysis of spoken japanese attitudes, in Proceeding of Speech Prosody 2014, 2014, p. 4. 424 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS [CI31] E. Garnaud, N. Hanusse, S. Maabout, and N. Novelli, Parallel mining of dependencies, in Proceedings of The 2014 International Conference on High Performance Computing & Simulation (HPCS 2014), IEEE, 2014, pp. 1–8. [CI32] E. Garnaud, S. Maabout, and M. Mosbah, Using functional dependencies for reducing the size of a data cube, in Proccedings of the 7th International Symposium on Foundations of Information and Knowledge Systems (FOIKS), Springer, ed., LNCS 7153, 2012, pp. 145–164. [CI33] A. Gouliemakis, J. Bridier, A. Barré, O. Claisse, D. Sherman, P. Durrens, A. LonvaudFunel, and E. Bon, How does oenococcus oeni adapt to its environment? a pangenomic oligonucleotide microarray for analysis o. oeni gene expression under wine shock., in oeno2011, Actes de Colloques du 9ème symposium international d’oenologie de Bordeaux, P. L. A. L. G. d. R. P. T. Univ. Bordeaux Segalen (P. Darriet, L. Geny, ed., Dunod, Paris, 2012, pp. 358–363. [CI34] A. Haddar, A. Hadj Kacem, Y. Métivier, M. Mosbah, and M. Jmaiel, A distributed computational model for mobile agents, in PRIMA 2007, vol. 5044 of Lecture Notes in Artificial Intelligence, Springer, 2009, pp. 417–421. [CI35] N. Hanusse and S. Maabout, Un algorithme parallèle pour l’extraction des bordures, in BDA’10, 2010, p. 11 pages. [CI36] N. Hanusse and S. Maabout, A parallel algorithm for computing borders, in Proceedings of the 20th Int. Conf. On Information and Knowledge Management, ACM, 2011, pp. 1639–1648. [CI37] N. Hanusse, S. Maabout, and R. Tofan, Algorithme distribué pour l’extraction des fréquents maximaux, in Algotel, A. Chaintreau and C. Magnien, eds., 2009. [CI38] N. Hanusse, S. Maabout, and R. Tofan, Matérialisation partielle des cubes de données, in Actes des 25èmes journées "Bases de Données Avancées" BDA’09, 2009, pp. 1–20. [CI39] N. Hanusse, S. Maabout, and R. Tofan, A view selection algorithm with performance guarantee, in International Conference on Extending Database Technology, 2009. [CI40] N. Hanusse, S. Maabout, and R. Tofan, Revisiting the partial data cube materialization, in Proceedings of the 15th conference on Advances in Data Bases and Information Systems, no. 6909 in LNCS, Springer, 2011, pp. 70–83. [CI41] D. Janin, F. Berthaud, M. Desainte-Catherine, Y. Orlarey, and S. Salvati, The t-calculus : towards a structured programing of (musical) time and space, in 2013 ACM SIGPLAN Workshop on Functional Art, Music, Modeling & Design, 2013, pp. 23–34. [CI42] D. Janin, F. Berthaut, and M. Desainte-Catherine, Multi-scale design of interactive music systems : the libtuiles experiment, in Proceedings of the Sound and Music Computing Conference (SMC), R. Bresin, ed., 2013, pp. 123–129. [CI43] A. Lambert, F. Queyroi, and R. Bourqui, Visualizing patterns in node-link diagrams, in Proceedings of the 16th International Conference on Information Visualisation (IV’12), 2012, pp. 48–53. [CI44] O. Ly, S. Chaumette, and R. Tabary, Automated extraction of polymorphic virus signatures using abstract interpretation, in Networks and System Security, 2011, pp. 41–48. [CI45] O. Ly, F. Krief, and M. Ben Mbarka, Entrusting remote software executed in an untrusted computation helper, in In proceedings of "Network and Service Security" (N2S’2009) IEEE, 2009. [CI46] B. Martin, D. Brown, P. Hanna, and P. Ferraro, Blast for audio sequences alignment: a fast scalable cover identification, in Proceedings of the 13th International Society for Music Information Retrieval Conference, 2012. [CI47] B. Martin, P. Hanna, M. Robine, and P. Ferraro, Indexing musical pieces using their major repetition, in ACM/IEEE Joint Conference on Digital Libraries, 2011, pp. 153–156. BIBLIOGRAPHY 425 [CI48] B. Martin, P. Hanna, M. Robine, and P. Ferraro, Towards an indexing method to speed-up music retrieval, in ACM SIGIR 2011 conference, 2011, pp. 1167–1168. [CI49] B. Martin, P. Hanna, V.-T. Ta, M. Desainte-Catherine, and P. Ferraro, Exemplar-based imputation of large missing audio parts using string matching on tonal features, in 12th International Society for Music Information Retrieval Conference, 2011, pp. 507–512. [CI50] M. Mosbah, T. Morsellino, and C. Aguerre, Debugging the execution of distributed algorithms over anonymous networks, in Information Visualisation (IV), IEEE, IEEE Computer science, 2012, pp. 464 – 470. [CI51] K. Musumbu, M. Diouf, and S. Maabout, Business rules generation methods by merging model driven architecture and web semantics, in Proceedings of 2010 IEEE International Conference On Software Engineering and Service Sciences, L. Wenzheng, ed., vol. IEEE of IEEE, IEEE, 2010, pp. 33–36. [CI52] N. Ouled Abdallah, H. Hadj Kacem, M. Mosbah, and A. Zemmari, Broadcast in wireless mobile sensor networks with population protocols and extension with the rendezvous model, in NOuvelles TEchnologies de la REpartition, K. Drira, A. H. Kacem, and M. Jmaiel, eds., IEEE, 2010, pp. 219–226. [CI53] M. Robine, P. Hanna, T. Rocher, and P. Ferraro, Structured representation of harmony for music retrieval, in Proceedings of the International Computer Music Conference, 2009. [CI54] H. Soueidan, G. Sutre, and M. Nikolski, Qualitative transition systems for the abstraction and comparison of transient behavior in parametrized dynamic models, in Proc. 7th Int. Conf. on Computational Methods in Systems Biology (CMSB’09), Bologna, Italy, Aug.-Sep. 2009, 21, ed., vol. 5688 of Lecture notes in BioInformatics, Springer Verlag, 2009, pp. 313–327. Conferences with published proceedings (national) [CN1] A. Benzakour, S. Maabout, M. Mosbah, and M. Sistiaga, Extraction de séquences fréquentes avec intervalles d’incertitude, in Actes de la 12e Conférence Internationale Francophone sur l’Extraction et la Gestion de Connaissance (EGC), RNTI (Revue des nouvelles technologies de l’information), Hermann, 2012, p. 12 pages. [CN2] C. Blanc, M. Delest, J.-M. Fédou, G. Melançon, and F. Queyroi, Évaluer la qualité d’une fragmentation de graphe multi-niveaux, in Information-Interaction-Intelligence (I3), C. i3, ed., vol. 11, Cépaduès, 2011, p. 1. [CN3] L. Bourgeade, T. Martin, A. Goulielmakis, A. Lonvaud-Funel, P. Lucas, and E. Bon, Cracking the pseudome code: Inside the "silent" psi-genes language to reconstruct oenococcus oeni evolutionary adaptation to wine, in Proceedings of the 18th CBL-Club des Bactéries Lactiques Meeting, U. C. VetAgroSup, ed., 2012. [CN4] D. Cassou, C. Consel, E. Balland, and J. Lawall, Faire levier sur les architectures logicielles pour guider et vérifier le développement d’applications scc, in GDR GPL’11: 3ème journées du Génie de la programmation et du logiciel, 2011, pp. 33–34. [CN5] L. Clément, K. Gerdes, and R. Marlet, Grammaires d’erreur, in Actes de TALN 2009, 2009, pp. 1–10. [CN6] E. Garnaud, N. Hanusse, S. Maabout, and N. Novelli, Calcul parallèle de dépendances, in Actes de la conférence BDA (Bases de Données Avancées), 2013, pp. 1–20. [CN7] E. Garnaud, S. Maabout, and M. Mosbah, Dépendances fonctionnelles et matérialisation partielle des cubes de données, in Actes des 7èmes journées francophones sur les Entrepôts de Données et Analyse en ligne, RNTI (Revue des Nouvelles Technologies de l’Information), Hermann, 2011. [CN8] N. Hanusse, S. Maabout, and R. Tofan, Algorithmes pour la sélection de vues à matérialiser avec garantie de performance, in Actes de la conférence EDA 2009, 2009, pp. 1–15. 426 APPENDIX F. LIST OF RESEARCH PRODUCTS AND ACHIEVEMENTS Conferences without published proceedings (international) [SI1] T.-D. Cao, R. Castanet, and P. Félix, Services web : du test actif au test passif, in CFIP 2011 Colloque Francophone sur l Ingénierie des Protocoles, 2011. [SI2] O. Ly, S. Chaumette, and R. Tabary, Automated software protection through program externalization on memory-limited secure devices, in International Conference on Embedded and Ubiquitous Computing (EUC), 2010. Other publications (international) [AI1] H. Boujut, J. Benois-Pineau, T. Ahmed, O. Hadar, and P. Bonnet, Nr video quality metric with visual saliency from h.264 code stream in lossy network channels. 2012. [AI2] B. Courcelle, C. Gavoille, M. M. Kanté, and A. Twigg, Optimal labelling for connectivity checking in planar networks with obstacles. 2009. Other publications (national) [AN1] A. Rousseau, A. Darnaud, B. Goglin, C. Acharian, C. Leininger, C. Godin, C. Holik, C. Kirchner, D. Rives, E. Darquie, E. Kerrien, F. Neyret, F. Masseglia, F. Dufour, G. Berry, G. Dowek, H. Robak, H. Xypas, I. Illina, I. Gnaedig, J. Jongwane, J. Ehrel, L. Viennot, L. Guion, L. Calderan, L. Kovacic, M. Collin, M.-A. Enard, M.-H. Comte, M. Quinson, M. Olivi, M. Giraud, M. Dorémus, M. Ogouchi, M. Droin, N. Lacaux, N. Rougier, N. Roussel, P. Guitton, P. Peterlongo, R.-M. Cornus, S. Vandermeersch, S. Maheo, S. Lefebvre, S. Boldo, T. Viéville, V. Poirel, A. Chabreuil, A. Fischer, C. Farge, C. Vadel, I. Astic, J.-P. Dumont, L. Féjoz, P. Rambert, P. Paradinas, S. De Quatrebarbes, and S. Laurent, Médiation scientifique : une facette de nos métiers de la recherche, tech. rep., 2013. Patents (international) [BI1] B. Martin, P. Hanna, V. T. Ta, M. Desainte-Catherine, J. Allali, M. Robine, and P. Ferraro, Exemplar based assignment of large missing audio parts using string matching on tonal features. patent n◦ US61/547,854., 2011.