Entry Feature Location Qualifier

Transcription

Entry Feature Location Qualifier
Sample Annotation File: WGS (Whole Genome Shotgun)
This line is not required for annotation
Feature
Entry
COMMON DATATYPE
KEYWORD
Location
DBLINK
SUBMITTER
Common information of all entries
Enter DATATYPE and
KEYWORD "WGS".
Use consrtm "qualifier" for
group name.
REFERENCE
Entry name should be
unique to all entries, and
identical to the one in the
DATE
COMMENT
ST_COMMENT
Second entry First entry
A012B01 source
Qualifier
type
keyword
keyword
project
biosample
sequence read archive
contact
consrtm
ab_name
ab_name
ab_name
ab_name
email
phone
fax
institute
department
country
state
city
street
zip
ab_name
ab_name
ab_name
ab_name
ab_name
title
status
year
hold_date
line
line
tagset_id
Assembly Method
Genome Coverage
Sequencing Technology
1..123456 organism
mol_type
strain
ff_definition
note
A012B02 source
1..234567 organism
mol_type
Enter the contig name
strain
using "note" qualifier.
ff_definition
note
Value
WGS
Select the KEYWORD from list of
WGS
methodological KEYWORD. Keywords are
STANDARD_DRAFT
listed on the following webpage,
PRJDB90001
http://www.insdc.org/documents/metho
SAMD90000000
DRR999900
dological-keywords.
Hanako Mishima
Enter two
qualifiers,
"project" for
Streptomyces flavus genome
sequencing
consortium
Mishima,H.
BioProject ID and "biosample" for
Yamada,T.
BioSample ID, on DBLINK line, respectively.
Park,C.S.
When the sequece is assembled from short
Liu,G.Q.
mishima@ddbj.nig.ac.jp reads, "sequence read archive" and
accession number of the Run Data issued
81-55-981-6853
by SRA databases.
81-55-981-6849
National Institute of Genetics
DNA Data Bank of Japan
Enter the full name for contact
Japan
Shizuoka
qualifier .
Mishima
Yata 1111
411-8540
Enter the date to withhold
Mishima,H.
your data. If the data should
Yamada,T.
be publicized immediately,
Kim,K.-H.
delete the DATE line.
Park,C.S.
Liu,G.Q.
Streptomyces flavus NBRC 12345 whole genome shotgun
Unpublished
2013
20141130
Please visit our web page Enter the ST_COMMENT by which
depends on the submitted sequences.
URL:http://www.ddbj.nig.ac.jp/
Genome-Assembly-Data
For eukaryotic genome entry(ies),
Velevt v. 2.0
"assembly name" qualifier is
60x
mandatory. Please see the Mass
454 GS FLX; ABI 3730
Submission System Making Files
Streptomyces flavus NBRC 12345
(COMMENT) for details.
genomic DNA
NBRC 12345
Streptomyces flavus NBRC 12345 DNA, contig: Sf012nb01
contig: Sf012nb01
Streptomyces flavus NBRC 12345
genomic DNA
NBRC 12345
Streptomyces flavus NBRC 12345 DNA, contig: Sf012nb02
contig: Sf012nb02