Entry Feature Location Qualifier

Sample Annotation File: WGS (Whole Genome Shotgun) is used as
piece of Scaffold CON entry
This line is not required for annotation file.
Entry
Feature
COMMON DATATYPE
KEYWORD
Location
DBLINK
SUBMITTER
Common inforamtion of all entries
Enter "WGS"on DATATYPE
and KEYWORD lines.
Use consrtm qualifier for
group name.
REFERENCE
Entry name should be unique to
all entries, and identical to the
one in the sequence file.
DATE
COMMENT
Second entry
First entry
ST_COMMENT
A012B01 source
Qualifier
type
keyword
keyword
project
biosample
sequence read archive
contact
consrtm
ab_name
ab_name
ab_name
ab_name
email
phone
fax
institute
department
country
state
city
street
zip
ab_name
ab_name
ab_name
ab_name
ab_name
title
status
year
hold_date
line
line
tagset_id
Assembly Method
Assembly Name
Genome Coverage
Sequencing Technology
1..123456 organism
mol_type
strain
ff_definition
note
A012B02 source
1..234567 organism
mol_type
Enter the contig name
strain
using "note" qualifier.
ff_definition
note
Value
Select the KEYWORD from list of
WGS
WGS
methodological KEYWORD. Keywords are
NON_CONTIGUOUS_FINISHED.
listed on the following webpage,
PRJDB12345
http://www.insdc.org/documents/method
SAMD90000001
ological-keywords.
DRR990000
Hanako Mishima
Zimmermannella
faecalis
Enter
two genome
qualifiers,sequencing
"project" consortium
for BioProject
Mishima,H.
ID and "biosample" for BioSample ID, on
Yamada,T.
DBLINK line, respectively.
Park,C.S.
When the sequece is assembled from short
Liu,G.Q.
reads, "sequence read archive" and accession
mishima@ddbj.nig.ac.jp
81-55-981-6853
number of the Run Data issued by SRA
81-55-981-6849
databases.
National Institute of Genetics
DNA Data Bank of Japan
Japan
Shizuoka
Enter the full name for contact qualifier .
Mishima
Yata 1111
411-8540
Mishima,H.
Enter the date to withhold your data.
Yamada,T.
If the data should be publicized
Kim,K.-H.
immediately, delete the DATE line.
Park,C.S.
Liu,G.Q.
Mouse whole genome shotgun sequence
Unpublished
2013
20141130
Please visit our web page
URL:http://www.ddbj.nig.ac.jp/
Genome-Assembly-Data
Velevt v. 2.0
Mmus_assembly01
60x
454 GS FLX; ABI 3730
Mus musculus
genomic DNA
15706
Mus musculus DNA,
contig: A012B01
Mus musculus
genomic DNA
15706
Mus musculus DNA,
contig: A012B02
Enter the ST_COMMENT by which depends
on the submitted sequences. For eukaryotic
genome entry(ies), "assembly name"
contig:
A012B01, strain: 15706
qualifier is mandatory. Please see the Mass
Submission System Making Files
(COMMENT) for details.
contig: A012B02, strain: 15706
Generally, email, phone, fax are not shown on DDBJ flat file. If you wish to disclose any of the three items,
please enter Qualifier: email_pub, phone_pub, fax_pub in Feature: SUBMITTER.
Please see the following site on Mass Submission System Making Files
"SUBMITTER"
http://www.ddbj.nig.ac.jp/sub/mss/annotation_file-e.html#5-1